ojxv 0.0.2 → 1.0.0

data/lib/ojxv/schemas/jats/1.1d1/JATS-journalpub-oasis-custom-classes1.ent

@@ -0,0 +1,329 @@
+<!-- ============================================================= -->
+<!--  MODULE:    Journal Publishing DTD with OASIS Tables          -->
+<!--             Customize Classes                                 -->
+<!--  VERSION:   ANSI/NISO JATS Version 1.0 (Z39.96-2012)          -->
+<!--  DATE:      July 2013                                         -->
+<!--                                                               -->
+<!-- ============================================================= -->
+
+<!-- ============================================================= -->
+<!--                    PUBLIC DOCUMENT TYPE DEFINITION            -->
+<!--                        TYPICAL INVOCATION                     -->
+<!--
+"-//NLM//DTD JATS (Z39.96) Journal Publishing DTD with OASIS Tables Customize Classes v1.1d1 20130915//EN"
+Delivered as file "JATS-journalpub-oasis-custom-classes1.ent"      -->
+<!-- ============================================================= -->
+
+
+<!-- ============================================================= -->
+<!-- SYSTEM:     Journal Publishing DTD with OASIS Tables          -->
+<!--             of the JATS DTD Suite                             -->
+<!--                                                               -->
+<!-- PURPOSE:    To declare the Parameter Entities (PEs) used to   -->
+<!--             over-ride the JATS DTD Suite default named        -->
+<!--             element classes.                                  -->
+<!--                                                               -->
+<!--             This DTD (in contrast to the Journal Archiving    -->
+<!--             and Interchange DTD) has more prescriptive content-->
+<!--             models. There are fewer choices in the models     -->
+<!--             within this DTD, and some XML structures that     -->
+<!--             were made part of the NISO JATS simply to         -->
+<!--             facilitate conversion of existing journal         -->
+<!--             material from other DTDs into this format have not-->
+<!--             been included in this DTD.                        -->
+<!--                                                               -->
+<!--             Similarly, this is also a tighter DTD. Some of the-->
+<!--             attributes that have type CDATA values in the     -->
+<!--             Archiving DTD, and can thus accept any value,     -->
+<!--             have been given explicit value lists in this DTD. -->
+<!--                                                               -->
+<!--             Note: Since PEs must be declared before they      -->
+<!--             are used, this module must be called before the   -->
+<!--             content modules that declare elements, and before -->
+<!--             the default classes module.                       -->
+<!--                                                               -->
+<!-- CONTAINS:   1) PEs for changing the contents of the default   -->
+<!--                element classes                                -->
+<!--             National Library of Medicine (NLM)                -->
+<!--                                                               -->
+<!-- CREATED FOR:                                                  -->
+<!--             This DTD was created from the JATS DTD Suite.     -->
+<!--             Digital archives and publishers may use the       -->
+<!--             DTD as is for markup of journal literature or     -->
+<!--             related material for archiving and transferring   -->
+<!--             such material between archives or create a        -->
+<!--             custom XML DTD from the Suite for                 -->
+<!--             these purposes.                                   -->
+<!--                                                               -->
+<!--             This DTD is in the public domain. An organization -->
+<!--             that wishes to create its own DTD from the suite  -->
+<!--             may do so without permission from NLM.            -->
+<!--                                                               -->
+<!--             The suite has been set up to be extended using a  -->
+<!--             new DTD file and a new DTD-specific customization -->
+<!--             module to redefine the many Parameter Entities.   -->
+<!--             Do not modify the suite directly or redistribute  -->
+<!--             modified versions of the suite.                   -->
+<!--                                                               -->
+<!--             In the interest of maintaining consistency and    -->
+<!--             clarity for potential users, NLM requests:        -->
+<!--                                                               -->
+<!--             1. If you create a DTD from the JATS DTD Suite    -->
+<!--                and intend to stay compatible with the suite,  -->
+<!--                then please include the following statement    -->
+<!--                as a comment in all of your DTD modules:       -->
+<!--                   "Created from, and fully compatible with,   -->
+<!--                    the ANSI/NISO Z39.96 Journal Article Tag   -->
+<!--                    Suite (JATS)."                             -->
+<!--                                                               -->
+<!--             2. If you alter one or more modules of the suite, -->
+<!--                then please rename your version and all its    -->
+<!--                modules to avoid any confusion with the        -->
+<!--                original suite. Also, please include the       -->
+<!--                following statement as a comment in all your   -->
+<!--                DTD modules:                                   -->
+<!--                   "Based in part on, but not fully compatible -->
+<!--                    with, the ANSI/NISO Z39.96 Journal Article -->
+<!--                    Tag Suite (JATS)."                         -->
+<!--                                                               -->
+<!-- ORIGINAL CREATION DATE:                                       -->
+<!--             September 2004                                    -->
+<!--                                                               -->
+<!-- CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96   -->
+<!--             Working Group. Mulberry Technologies was          -->
+<!--             supported by National Center for Biotechnology    -->
+<!--             Information (NCBI), a center of the US National   -->
+<!--             Library of Medicine (NLM).                        -->
+<!--                                                               -->
+<!--             The Journal Publishing DTD is built from the      -->
+<!--             Archiving and Interchange DTD Suite.              -->
+<!--                                                               -->
+<!--             Suggestions for refinements and enhancements to   -->
+<!--             this DTD should be sent in email to:              -->
+<!--                 jats@ncbi.nlm.nih.gov                         -->
+<!-- ============================================================= -->
+
+
+<!-- ============================================================= -->
+<!--                    DTD VERSION/CHANGE HISTORY                 -->
+<!-- ============================================================= -->
+<!--
+
+Version  Reason/Occasion                   (who) vx.x (yyyy-mm-dd)
+   
+     =============================================================
+     NISO JATS Version 1.1d1           (DAL/BTU) v1.1 (2013-11-15)
+   
+     ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1) 
+
+     NISO JATS Standing Committee met and answered the requests and
+     suggestions from the NISO request forms.
+     Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs, XSDs, 
+     RNGs and supporting documentation are available at
+           http://jats.nlm.nih.gov/1.1/
+
+  9. NEW CODE ELEMENT- Added <code> to
+      - alternatives-display.class
+
+ 10. RUBY - Added <ruby> to emphasis.class. Added new 
+     face-markup.class to handle all emphasis except <ruby>.
+     <ruby> will not in this round be recursive.
+
+     =============================================================
+     NISO JATS Version 1.0             (DAL/BTU) v1.0 (2012-xx-xx)
+   
+     ANSI/NISO Z39.96-2012 (Version 1.0) 
+
+     Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs, XSDs, 
+     RNGs and supporting documentation are available at
+           http://jats.nlm.nih.gov/1.0/
+
+  7. CITATION ALTERNATIVES - Added a new element 
+     <citation-alternatives> to the citation.class. The element
+     will hold, for example, a single citation in multiple
+     languages or a single citation tagged as a <mixed-citation>
+     complete with punctuation and spacing and also as an
+     <element-citation> with all punctuation and spacing removed.
+   
+   
+  6. COLLABORATION ALTERNATIVES - Added <collab-alternatives> to
+     the name.class, to allow a <collab-alternatives> elements to
+     be anywhere <collab> already was.
+   
+     =============================================================
+     Version 0.4                       (DAL/BTU) v0.4 (2011-01-31)
+   
+     This Tag Set is in the process of becoming a NISO standard.
+     The version numbers are starting over from 0.4", as a Trial
+     Use Draft, to be made into "Version 1.0" when the Tag Suite 
+     becomes a NISO standard. Thus, the version number that would
+     have been "NLM Version 3.1 Draft" has become NISO JATS
+     "Version 0.4".
+
+     Details on NISO Trial Use Draft Version 0.4 are available at
+           http://jats.nlm.nih.gov/JATS-0.4.
+
+  5. Created May 2010 as part of adding Publishing OASIS model
+     that uses the OASIS CALS Exchange Table Model rather than the
+     XHTML model. Updated the public identifier to 
+     "v0.4 20110131", modified the formal public identifier to 
+     include "JATS (Z39.96)", and the filename as delivered to 
+     include "JATS" and the new version number "0".
+
+  4. TABLE ELEMENTS- Added the OASIS CALS Table model to the
+     table classes.
+
+  3. AFFILIATION ALTERNATIVES - Added the element <aff-alternatives>
+     to contrib-info.class to hold multiple <aff>s that are
+     representations of a single affiliation, for example, the name
+     of an institution in two languages or two scripts.
+
+  2. NAME ALTERNATIVES - Added <name-alternatives> to
+     %name.class;, to therefore be used wherever name is allowed.
+
+     =============================================================
+     Version 3.0                       (DAL/BTU) v3.0 (2007-10-31)
+
+     Version 3.0 is the first non-backward-compatible release.
+     In addition to the usual incremental changes, some
+     elements and attributes have been renamed and/or remodeled
+     to better meet user needs and to increase tag set consistency.
+     All module change histories are available through the Tag Suite
+     web site at http://dtd.nlm.nih.gov.
+
+     Details on version 3.0 are available at
+           http://dtd.nlm.nih.gov/3.0.
+
+  1. Updated public identifier to "v3.0 20080202//EN"              -->
+
+<!-- ============================================================= -->
+<!--                    PARAMETER ENTITIES FOR CLASS OVER-RIDES    -->
+<!-- ============================================================= -->
+
+
+<!-- ============================================================= -->
+<!--                    OVER-RIDE FORMATTING CLASS (format.ent)    -->
+<!-- ============================================================= -->
+
+
+<!--                    EMPHASIS RENDITION ELEMENTS                -->
+<!--                    All the face markup plus <ruby>            -->
+<!ENTITY % emphasis.class
+                        "bold | fixed-case | italic | monospace | 
+                         overline | roman |  sans-serif | sc | 
+                         strike | underline |
+                         ruby"                                       >
+
+
+<!--                    FACE MARKUP CLASS ELEMENTS                 -->
+<!--                    All the face markup without <ruby>         -->
+<!ENTITY % face-markup.class
+                        "bold | fixed-case |italic | monospace | 
+                         overline | roman | sans-serif | sc | strike |
+                         underline"                                  >
+
+
+
+<!-- ============================================================= -->
+<!--                    OVER-RIDE INLINE CLASSES                   -->
+<!-- ============================================================= -->
+
+
+<!--                    CITATION CLASS ELEMENTS                    -->
+<!--                    Reference to an external document, as used
+                        within, for example, the text of a
+                        paragraph                                  -->
+<!ENTITY % citation.class
+                        "citation-alternatives | element-citation | 
+                         mixed-citation | nlm-citation"              >
+
+
+<!--                    CITATION ADDITIONS CLASS ELEMENTS          -->
+<!--                    Elements that are not part of the broader
+                        references.class, but that need to be part
+                        of the model for citations.                -->
+<!ENTITY % citation-additions.class
+                        "string-date"                                >
+
+
+<!--                    CITATION MINUS ALTERNATIVES CLASS ELEMENTS -->
+<!--                    All the citation elements except the
+                        <citation-alternatives> element.           -->
+<!ENTITY % citation-minus-alt.class
+                        "element-citation | mixed-citation | 
+                         nlm-citation"                               >
+
+
+<!--                    CONTRIBUTOR INFORMATION                    -->
+<!--                    Metadata about a contributor               -->
+<!ENTITY % contrib-info.class
+                        "address | aff | aff-alternatives |
+                         author-comment | bio | email | ext-link |
+                         on-behalf-of | role | uri | xref"           >
+
+
+<!--                    DATE CLASS ELEMENTS                        -->
+<!--                    Dates and other matters of history         -->
+<!ENTITY % date.class   "date"                                       >
+
+
+<!--                    NAMES CLASS                                -->
+<!--                    The elements used to name the personal names
+                        for individuals and the collaboration names
+                        for groups
+                        Removed <string-name>                      -->
+<!ENTITY % name.class   "anonymous | collab | collab-alternatives |
+                         name | name-alternatives"                   >
+
+
+<!-- ============================================================= -->
+<!--                    OVER-RIDE PARAGRAPH-LIKE ELEMENTS          -->
+<!-- ============================================================= -->
+
+
+<!--                    REST OF PARAGRAPH CLASS (MINUS PARAGRAPH)  -->
+<!--                    Information for the reader that is at the
+                        same structural level as a Paragraph.
+                        Contains all paragraph-level objects that are
+                        not also used inside tables and excepting
+                        also the paragraph element itself.         -->
+<!ENTITY % rest-of-para.class
+                        "disp-quote | speech | statement |
+                         verse-group"                                >
+
+
+<!-- ============================================================= -->
+<!--                    TABLE CLASSES                              -->
+<!-- ============================================================= -->
+
+
+<!--                    ALTERNATIVES DISPLAY CLASS ELEMENTS        -->
+<!--                    Display elements that can be alternatives to
+                        each  other inside an alternatives element.
+                                                                   -->
+<!ENTITY % alternatives-display.class
+                        "array | chem-struct | code | graphic |
+                         inline-graphic |
+                         inline-supplementary-material |
+                         media | preformat |private-char |
+                         supplementary-material | 
+                         table | %otable.qname; |
+                         textual-form"                               >
+
+
+<!--                    TABLE CLASS ELEMENTS                       -->
+<!--                    Elements that will be used to contain the
+                        rows and columns inside the Table Wrapper
+                        element <tbl>.  The following elements can
+                        be set up for inclusion:
+                          OASIS CALS Table  table or  oasis:table  -->
+<!ENTITY % table.class  "table | %otable.qname;"                     >
+
+
+<!--                    TABLE BODY CLASS                           -->
+<!--                    To include just a table body <tbody> 
+                        element                                    -->
+<!ENTITY % tbody.class  "tbody | %otbody.qname;"                     >
+
+
+<!-- ================== End Publishing Classes Customization ===== -->

data/lib/ojxv/schemas/jats/1.1d1/JATS-journalpub-oasis-custom-modules1.ent

@@ -0,0 +1,222 @@
+<!-- ============================================================= -->
+<!--  MODULE:    Journal Publishing DTD with OASIS Tables          -->
+<!--             DTD-Specific Modules                              -->
+<!--  VERSION:   ANSI/NISO JATS Version 1.0 (Z39.96-2012)          -->
+<!--  DATE:      July 2013                                         -->
+<!--                                                               -->
+<!-- ============================================================= -->
+
+<!-- ============================================================= -->
+<!--                    PUBLIC DOCUMENT TYPE DEFINITION            -->
+<!--                        TYPICAL INVOCATION                     -->
+<!--
+"-//NLM//DTD JATS (Z39.96) Journal Publishing DTD with OASIS Tables DTD-Specific Modules v1.1d1 20130915//EN"
+     Delivered as file "JATS-journalpub-oasis-custom-modules1.ent" -->
+<!-- ============================================================= -->
+
+<!-- ============================================================= -->
+<!-- SYSTEM:     Journal Publishing DTD with OASIS Tables          -->
+<!--             of the JATS DTD Suite                             -->
+<!--                                                               -->
+<!-- PURPOSE:    To name any modules created explicitly for this   -->
+<!--             DTD, that is, not present in the JATS DTD Suite   -->
+<!--                                                               -->
+<!-- CONTAINS:   Full external Parameter Entity declarations       -->
+<!--             for all Journal Publishing OASIS DTD-Specific     -->
+<!--             modules used by this DTD. (Note: the modules are  -->
+<!--             DECLARED in this module, but referenced [invoked] -->
+<!--             in the Journal Publishing DTD with OASIS Tables   -->
+<!--             DTD module.)                                      -->
+<!--                                                               -->
+<!-- TAG SET SPONSOR                                               -->
+<!--             National Center for Biotechnology                 -->
+<!--                Information (NCBI)                             -->
+<!--             National Library of Medicine (NLM)                -->
+<!--                                                               -->
+<!-- CREATED FOR:                                                  -->
+<!--             This DTD was created from the JATS DTD Suite.     -->
+<!--             Digital archives and publishers may use the       -->
+<!--             DTD as is for markup of journal literature or     -->
+<!--             related material for archiving and transferring   -->
+<!--             such material between archives or create a        -->
+<!--             custom XML DTD from the Suite for                 -->
+<!--             these purposes.                                   -->
+<!--                                                               -->
+<!--             This DTD is in the public domain. An organization -->
+<!--             that wishes to create its own DTD from the suite  -->
+<!--             may do so without permission from NLM.            -->
+<!--                                                               -->
+<!--             The suite has been set up to be extended using a  -->
+<!--             new DTD file and a new DTD-specific customization -->
+<!--             module to redefine the many Parameter Entities.   -->
+<!--             Do not modify the suite directly or redistribute  -->
+<!--             modified versions of the suite.                   -->
+<!--                                                               -->
+<!--             In the interest of maintaining consistency and    -->
+<!--             clarity for potential users, NLM requests:        -->
+<!--                                                               -->
+<!--             1. If you create a DTD from the JATS DTD Suite    -->
+<!--                and intend to stay compatible with the suite,  -->
+<!--                then please include the following statement    -->
+<!--                as a comment in all of your DTD modules:       -->
+<!--                   "Created from, and fully compatible with,   -->
+<!--                    the ANSI/NISO Z39.96 Journal Article Tag   -->
+<!--                    Suite (JATS)."                             -->
+<!--                                                               -->
+<!--             2. If you alter one or more modules of the suite, -->
+<!--                then please rename your version and all its    -->
+<!--                modules to avoid any confusion with the        -->
+<!--                original suite. Also, please include the       -->
+<!--                following statement as a comment in all your   -->
+<!--                DTD modules:                                   -->
+<!--                   "Based in part on, but not fully compatible -->
+<!--                    with, the ANSI/NISO Z39.96 Journal Article -->
+<!--                    Tag Suite (JATS)."                         -->
+<!--                                                               -->
+<!-- ORIGINAL CREATION DATE:                                       -->
+<!--             September 2004                                    -->
+<!--                                                               -->
+<!-- CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96   -->
+<!--             Working Group. Mulberry Technologies was          -->
+<!--             supported by National Center for Biotechnology    -->
+<!--             Information (NCBI), a center of the US National   -->
+<!--             Library of Medicine (NLM).                        -->
+<!--                                                               -->
+<!--             The Journal Publishing DTD is built from the      -->
+<!--             Archiving and Interchange DTD Suite.              -->
+<!--                                                               -->
+<!--             Suggestions for refinements and enhancements to   -->
+<!--             this DTD should be sent in email to:              -->
+<!--                 jats@ncbi.nlm.nih.gov                         -->
+<!-- ============================================================= -->
+
+
+<!-- ============================================================= -->
+<!--                    DTD VERSION/CHANGE HISTORY                 -->
+<!-- ============================================================= -->
+<!--
+
+Version  Reason/Occasion                   (who) vx.x (yyyy-mm-dd)
+   
+     =============================================================
+     NISO JATS Version 1.0             (DAL/BTU) v1.0 (2012-xx-xx)
+   
+     ANSI/NISO Z39.96-2012 (Version 1.0) 
+
+     Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs, XSDs, 
+     RNGs and supporting documentation are available at
+           http://jats.nlm.nih.gov/1.0/
+   
+  5. OASIS TABLE NAMESPACE MODIFICATIONS - Added a new module
+     that sets up the namespace URI and namespace prefix for
+     the OASIS tables models.
+
+  4. Updated the DTD-version attribute to "1.0" and the formal
+     public identifier to the date: "v1.0 20120330//EN".
+
+     =============================================================
+     Version 0.4                       (DAL/BTU) v0.4 (2011-01-31)
+   
+     This Tag Set is in the process of becoming a NISO standard.
+     The version numbers are starting over from 0.4", as a Trial
+     Use Draft, to be made into "Version 1.0" when the Tag Suite 
+     becomes a NISO standard. Thus, the version number that would
+     have been "NLM Version 3.1 Draft" has become NISO JATS
+     "Version 0.4".
+
+     Details on NISO Trial Use Draft Version 0.4 are available at
+           http://jats.nlm.nih.gov/JATS-0.4.
+   
+  3. Updated the DTD-version attribute to "0.4" 
+   
+  2. Updated the public identifier to "v0.4 20110131", 
+     modified the formal public identifier to include "JATS (Z39.96)",
+     and the filename as delivered to include "JATS" and the
+     new version number "0".
+
+     =============================================================
+     Version 3.0                       (DAL/BTU) v3.0 (2007-10-31)
+
+     Version 3.0 is the first non-backward-compatible release.
+     In addition to the usual incremental changes, some
+     elements and attributes have been renamed and/or remodeled
+     to better meet user needs and to increase tag set consistency.
+     All module change histories are available through the Tag Suite
+     web site at http://dtd.nlm.nih.gov.
+
+     Details on version 3.0 are available at
+           http://dtd.nlm.nih.gov/3.0.
+
+  1. Updated public identifier to "v3.0 20080202//EN"              -->
+
+<!-- ============================================================= -->
+<!--                    SET UP OASIS NAMESPACE AND PREFIX          -->
+<!-- ============================================================= -->
+
+
+<!--                    OASIS-TABLE-SPECIFIC NAMESPACE AND PREFIX  -->
+<!--                    Set up the Parameter Entities used to control
+                        the namespace URI and prefix for the OASIS
+                        CALS Exchange table Model (JATS version).  -->
+<!ENTITY % JATS-oasis-namespace.ent
+                        PUBLIC
+"-//NLM//DTD JATS OASIS Table Namespace Module v1.1d1 20130915//EN"
+"JATS-oasis-namespace1.ent"                                          > 
+
+
+<!-- ============================================================= -->
+<!--                    CUSTOMIZATION MODULES DECLARED             -->
+<!-- ============================================================= -->
+
+
+<!--                    DTD-SPECIFIC CLASS CUSTOMIZATIONS MODULE   -->
+<!--                    Set up the Parameter Entities and element
+                        class definitions that will be used to
+                        over-ride some element classes in the
+                        DTD Suite. Used for prefixed namespaced
+                        OASIS tables when used alone.              -->
+<!ENTITY % journalpub-oasis-custom-classes1.ent
+                        PUBLIC
+"-//NLM//DTD JATS (Z39.96) Journal Publishing DTD with OASIS Tables Customize Classes v1.1d1 20130915//EN"
+"JATS-journalpub-oasis-custom-classes1.ent"                          >
+
+
+<!--                    DTD-SPECIFIC MIX CUSTOMIZATIONS MODULE     -->
+<!--                    Set up the Parameter Entities and element
+                        mix definitions that will be used to
+                        over-ride some element mixes in the DTD
+                        Suite.                                     -->
+<!ENTITY % journalpubcustom-mixes.ent
+                        PUBLIC
+"-//NLM//DTD JATS (Z39.96) Journal Publishing DTD Customize Mixes Module v1.1d1 20130915//EN"
+"JATS-journalpubcustom-mixes1.ent"                                   >
+
+
+<!--                    DTD-SPECIFIC MODELS/ATTRIBUTES CUSTOMIZATIONS
+                        MODULE                                     -->
+<!--                    Set up the Parameter Entities for element-
+                        specific element groups, complete content
+                        models, and attribute list and value over-
+                        rides. These PEs will over-ride selected
+                        content models and attribute lists for the
+                        Journal Archiving and Interchange DTD.     -->
+<!ENTITY % journalpubcustom-models.ent
+                        PUBLIC
+"-//NLM//DTD JATS (Z39.96) Journal Publishing DTD Customize Content and Attributes Module v1.1d1 20130915//EN"
+"JATS-journalpubcustom-models1.ent"                                  >
+
+
+<!--                    NLM CITATION MODULE                        -->
+<!--                    The only new element created for the
+                        Publishing DTD, the highly structured NLM
+                        citation, to enforce a slightly loose version
+                        of an NLM-structured bibliographic reference.
+                        Sequence is enforced and interior punctuation
+                        is expected to be generated.               -->
+<!ENTITY % nlmcitation.ent
+                        PUBLIC
+"-//NLM//DTD JATS (Z39.96) NLM Citation v1.1d1 20130915//EN"
+"JATS-nlmcitation1.ent"                                              >
+
+
+<!-- =================== End Publishing DTD Module of Modules ==== -->