ojxv 0.0.2 → 1.0.0

data/lib/ojxv/schemas/jats/1.1d2/JATS-articleauthcustom-models1.ent

@@ -0,0 +1,1233 @@
+<!-- ============================================================= -->
+<!--  MODULE:    Article Authoring DTD Over-ride Content and       -->
+<!--             Attribute Module                                  -->
+<!--  VERSION:   ANSI/NISO JATS Version 1.0 (Z39.96-2012)          -->
+<!--  DATE:      September 2014                                    -->
+<!--                                                               -->
+<!-- ============================================================= -->
+
+<!-- ============================================================= -->
+<!--                    PUBLIC DOCUMENT TYPE DEFINITION            -->
+<!--                        TYPICAL INVOCATION                     -->
+<!--
+"-//NLM//DTD JATS (Z39.96) Article Authoring DTD Over-ride Content and Attribute Module v3.0 20080202//EN"
+Delivered as file "JATS-articleauthcustom-models1.ent"             -->
+<!-- ============================================================= -->
+
+
+<!-- ============================================================= -->
+<!-- SYSTEM:     Article Authoring DTD of the JATS DTD Suite       -->         
+<!--                                                               -->
+<!-- PURPOSE:    To declare the Parameter Entities (PEs) used to   -->
+<!--             over-ride the content models, parts of content    -->
+<!--             models, or attribute lists of the JATS DTD Suite  -->
+<!--                                                               -->
+<!--             Or-groups within models should use mixes or       -->
+<!--             classes rather than name elements directly.       -->
+<!--                                                               -->
+<!--             Note: Since PEs must be declared before they      -->
+<!--             are used, this module must be called before the   -->
+<!--             content modules that declare elements.            -->
+<!--                                                               -->
+<!-- TAG SET SPONSOR                                               -->
+<!--             National Center for Biotechnology                 -->
+<!--                Information (NCBI)                             -->
+<!--             National Library of Medicine (NLM)                -->
+<!--                                                               -->
+<!-- CREATED FOR:                                                  -->
+<!--             This DTD was created from the JATS DTD Suite.     -->
+<!--             Authors, digital archives, and publishers may     -->
+<!--             use the DTD as is for markup of journal           -->
+<!--             literature or related material for archiving      -->
+<!--             and transferring such material between archives   -->
+<!--             or create a custom XML DTD from the Suite for     -->
+<!--             these purposes.                                   -->
+<!--                                                               -->
+<!--             This DTD is in the public domain. An organization -->
+<!--             that wishes to create its own DTD from the suite  -->
+<!--             may do so without permission from NLM.            -->
+<!--                                                               -->
+<!--             The suite has been set up to be extended using a  -->
+<!--             new DTD file and a new DTD-specific customization -->
+<!--             module to redefine the many Parameter Entities.   -->
+<!--             Do not modify the suite directly or redistribute  -->
+<!--             modified versions of the suite.                   -->
+<!--                                                               -->
+<!--             In the interest of maintaining consistency and    -->
+<!--             clarity for potential users, NLM requests:        -->
+<!--                                                               -->
+<!--             1. If you create a DTD from the JATS DTD Suite    -->
+<!--                and intend to stay compatible with the suite,  -->
+<!--                then please include the following statement    -->
+<!--                as a comment in all of your DTD modules:       -->
+<!--                   "Created from, and fully compatible with,   -->
+<!--                    the ANSI/NISO Z39.96 Journal Article Tag   -->
+<!--                    Suite (JATS)."                             -->
+<!--                                                               -->
+<!--             2. If you alter one or more modules of the suite, -->
+<!--                then please rename your version and all its    -->
+<!--                modules to avoid any confusion with the        -->
+<!--                original suite. Also, please include the       -->
+<!--                following statement as a comment in all your   -->
+<!--                DTD modules:                                   -->
+<!--                   "Based in part on, but not fully compatible -->
+<!--                    with, the ANSI/NISO Z39.96 Journal Article -->
+<!--                    Tag Suite (JATS)."                         -->
+<!--                                                               -->
+<!-- ORIGINAL CREATION DATE:                                       -->
+<!--             June 2005                                         -->
+<!--                                                               -->
+<!-- CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96   -->
+<!--             Working Group. Mulberry Technologies was          -->
+<!--             supported by National Center for Biotechnology    -->
+<!--             Information (NCBI), a center of the US National   -->
+<!--             Library of Medicine (NLM).                        -->
+<!--                                                               -->
+<!--             The Article Authoring DTD is built from the       -->
+<!--             Archiving and Interchange DTD Suite.              -->
+<!--                                                               -->
+<!--             Suggestions for refinements and enhancements to   -->
+<!--             this DTD should be sent in email to:              -->
+<!--                 jats@ncbi.nlm.nih.gov                         -->
+<!-- ============================================================= -->
+
+
+<!-- ============================================================= -->
+<!--                    DTD VERSION/CHANGE HISTORY                 -->
+<!-- ============================================================= -->
+<!--
+
+Version  Reason/Occasion                   (who) vx.x (yyyy-mm-dd)
+ 
+     =============================================================
+     JATS Version 1.1d2              (DAL/BTU) v1.1d2 (2014-09-30)
+   
+     NISO JATS is a continuing maintenance NISO Standard, which 
+     requires voting by the NISO membership to be changed. This
+     Committee Draft 1.1d2 will be sent to the NISO voting
+     membership, to become (if approved) NISO JATS 1.1.
+     
+     This catalog represents an interim version of the
+     non-normative JATS DTD Suite, as an indication to JATS users
+     the decisions that have been made by the JATS Standing
+     Committee.
+ 
+ 33. COLLAB ATTRIBUTES - Redefined to get rid of @symbol
+ 
+ 32. UNUSED PARAMETER ENTITIES DELETED
+        - aff-model
+        - fig-group-model
+ 
+ 31. VERSION ELEMENTS EDITION
+     The new element <version> uses the PE %-just-rendition,
+     but Authoring has set that PE to null, so the <version>
+     element added <sup> and <sub> to be like the content
+     of <edition>.
+ 
+ 30. VALUE LIST FOR PERSON-GROUP-TYPE
+     Added "curator" to the list of person-group role values.
+
+ 29. NAME OF JATS COMMON ATTRIBUTES
+     Common attlists renamed with "jats-" at the front.
+
+ 28. TITLE FOR LIST ITEMS
+     Added an optional <title> to the beginning of each <list-item>.
+
+ 27. EDITION ELEMENTS - Added <sub> and <sup> to the model of
+     edition. These were needed now that the "Edition" element
+     has been renamed and repurposed as "Edition Statement".
+
+ 26. STATEMENT - Added new statement.class inside the model
+     for <statement>, so that statements can be recursive.
+
+ 25. JATS became version "1.1d2" and "v1.1d2 20140930//EN"
+
+ 24. REFERENCE TYPES
+      - Added "collab"
+
+ 23. CONFERENCE LOCATION ELEMENTS and PUBLISHER-LOC ELEMENTS
+      - Added 3 new OPTIONAL elements: <city>, <state>, 
+        and <postal-code>
+
+ 22. ADDRESS MODEL
+      - Added 3 new OPTIONAL elements: <city>, <state>, 
+        and <postal-code>
+   
+     =============================================================
+     NISO JATS Version 1.1d1           (DAL/BTU) v1.1 (2013-11-15)
+   
+     ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1) 
+
+     NISO JATS Standing Committee met and answered the requests and
+     suggestions from the NISO request forms.
+     Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs, XSDs, 
+     RNGs and supporting documentation are available at
+           http://jats.nlm.nih.gov/1.1/
+
+ 21.GLOBAL ATTRIBUTES - Added the new parameter entity 
+        "%jats-common-atts;
+     to every element in this module. This PE adds (for now) the
+     @id attribute and the @xml:base attribute to every element,
+     whether metadata or narrative.
+     Since the @id in this parameter entity is optional, a second
+     parameter entity jats-common-atts-id-required was also added.
+     The two are kept in sync with the jats-base-atts parameter 
+     entity.
+
+ 20. ON-BEHALF-OF NEW CONTENT
+     Added <xref>, <fn>, and <target> (the simple links) to 
+     <on-behalf-of>.
+
+ 19. NEW TOGGLE ATTRIBUTE
+     @toggle added to the attributes for <underline> through
+     %underline-atts;.
+
+ 18. NEW ELEMENT <era>
+     Added to the model of <date>, optional following year.
+
+ 17. XML Base
+     Added the attribute @xml:base to the Global (common)
+     attributes used on all elements.
+
+ 16. INSTITUTION WRAP ADDED
+     Added the elements <institution-wrap> to the following elements
+     through the institution-wrap.class:
+      - <address>
+      - <conf-sponsor>
+      - <funding-source>
+      - <publisher-name>
+      - <std-organization>
+
+ 15. ABSTRACTS AND KEYWORDS 
+     The 2 new classes described in #14 were used to add 
+     <abstract> and <keyword> to many elements in the Archiving
+     and Publishing models. Since these were NOT to be added to
+     Authoring, some elements that did not need to be
+     redefined before, now need to be redefined. No content
+     model changes were made by these redefinitions.
+     - disp-formula-group
+     - statement
+    
+ 14. ABSTRACTS AND KEYWORDS
+       Changed "abstract*" to "(%abstract.class;)*"
+       and "kwd-group*" to "(%kwd-group.class;)*" since those
+       classes now exist. Elements should have a limited number of
+       ways to be invoked.
+        - article-meta (through %article-meta-model;)
+   
+     =============================================================
+     NISO JATS Version 1.0             (DAL/BTU) v1.0 (2012-xx-xx)
+   
+     ANSI/NISO Z39.96-2012 (Version 1.0) 
+
+     Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs, XSDs, 
+     RNGs and supporting documentation are available at
+           http://jats.nlm.nih.gov/1.0/
+   
+ 13. RELATED OBJECT - Added <related-object> everywhere
+     <related-article> was used, including inside 
+     <article-meta> using article-meta-model.
+
+ 12. CONTRIBUTOR MODEL - Added "contrib-id.class" to the beginning
+     at the <contrib> model, to hold identifiers for people,
+     such as publishers-specific IDs, ORCIDs, and JST and NII 
+     identifiers.
+   
+ 11. STANDARDS ORGANIZATION - Added std-organization-elements
+     to reduce what was allowed in the names of standards bodies.
+   
+ 10. PARAGRPH PARAMETER ENTITY SYNTAX CHANGE (no models changed)
+     Fixed content models that were stated as "p*", "p+", and
+     "sec*" to use the %just-para.class; and %sec.class; classes. 
+     Element models that were changed include:
+      - abstract
+      - ack
+      - app-group
+      - disp-quote-model
+      - glossary
+      - ref-list
+   
+  9. Updated the public identifier to "v1.0 20120330//EN", 
+     modified the formal public identifier to include "JATS (Z39.96)",
+     and the filename as delivered to include "JATS" and the
+     new version number "1".
+
+     =============================================================
+     Version 0.4                       (DAL/BTU) v0.4 (2011-01-31)
+   
+     This Tag Set is in the process of becoming a NISO standard.
+     The version numbers are starting over from 0.4", as a Trial
+     Use Draft, to be made into "Version 1.0" when the Tag Suite 
+     becomes a NISO standard. Thus, the version number that would
+     have been "NLM Version 3.1 Draft" has become NISO JATS
+     "Version 0.4".
+
+     Details on NISO Trial Use Draft Version 0.4 are available at
+           http://jats.nlm.nih.gov/JATS-0.4.
+   
+  8. Updated the DTD-version attribute to "0.4" 
+   
+  7. Updated the public identifier to "v0.4 20110131", 
+     modified the formal public identifier to include "JATS (Z39.96)",
+     and the filename as delivered to include "JATS" and the
+     new version number "0".
+           http://jats.nlm.nih.gov/0.4.
+
+  6. KEYWORD GROUP - Made <kwd-group> repeatable inside
+     <article-meta> by modifying %article-meta-model;
+
+  5. MEDIA - In 3.0 <graphic> and <media> used the same model,
+     defined by %graphic-model;. In 0.4, %media-model; was added to
+     separate the redefinition possibilities. Since Authoring had
+     redefined %graphic-model;, the same redefinition was necessary
+     for <media> through %media-model;.
+
+  4. INITIALS - Removed the attribute over-ride for <surname> and
+     <given-names> to allow the use of @initials.
+
+  3. PERSON-GROUP - Became a mixed-content model, so the parameter
+     entity %person-group-model: was changed to
+     %person-group-elements;, which will be mixed with #PCDATA
+     as defined in references.ent. The PE person-group-model has
+     been retained in references.ent for compatibility, but has been
+     set to the mixed model using person-group-elements.
+
+  2. @SPECIFIC-USE and @XML:LANG - Added the @specific-use
+     to the following over-rides:
+      - fn through fn-atts (@specific-use only; @xml:lang already)
+      - inline-graphic-atts through inline-graphic-atts (both)
+      - list through list-atts (@xml:lang only; @specific-use already)
+      - person-group through person-group-atts (both
+      - underline through underline-atts (both)
+
+     =============================================================
+     Version 3.0                       (DAL/BTU) v3.0 (2007-10-31)
+
+     Version 3.0 is the first non-backward-compatible release.
+     In addition to the usual incremental changes, some
+     elements and attributes have been renamed and/or remodeled
+     to better meet user needs and to increase tag set consistency.
+     All module change histories are available through the Tag Suite
+     web site at http://dtd.nlm.nih.gov.
+
+     Details on version 3.0 are available at
+           http://dtd.nlm.nih.gov/3.0.
+
+  1. Updated public identifier to "v3.0 20080202//EN"              -->
+
+<!-- ============================================================= -->
+<!--                    INLINE MIXES TO OVER-RIDE CONTENT MODELS   -->
+<!--                    (ELEMENTS TO BE ADDED TO #PCDATA IN MODELS)-->
+<!-- ============================================================= -->
+
+
+<!--                    ADDRESS LINE ELEMENTS                      -->
+<!--                    Elements for use in the <addr-line> element-->
+<!ENTITY % addr-line-elements
+                        "%rendition-plus; | %address-line.class;"    >
+
+
+<!--                    AFFILIATION ELEMENTS                       -->
+<!--                    Elements for use in the <aff> element
+                        Removed <label>                            -->
+<!ENTITY % aff-elements "| %address.class; | %address-link.class; |
+                           %break.class; |  %emphasis.class; |
+                           %simple-link.class; | %subsup.class;"     >
+
+
+<!--                    AWARD-ID ELEMENTS                          -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        the <award-id>                             -->
+<!ENTITY % award-id-elements
+                        ""                                           >
+
+
+<!--                    CHEMICAL STRUCTURE ELEMENTS                -->
+<!--                    Those elements that may mix with the data
+                        characters inside a Chemical Structure
+                        <chem-struct>                              -->
+<!ENTITY % chem-struct-elements
+                        "| %access.class; | %address-link.class; |
+                         %break.class; |  %emphasis.class;  |
+                         %id.class; | %list.class; |
+                         %simple-display.class; |
+                         %simple-link.class; | %subsup.class; "      >
+
+
+<!--                    CITATION ELEMENTS                          -->
+<!--                    Content for both types of citation. These
+                        elements may be mixed with #PCDATA in the
+                        <mixed-citation> element (in which all
+                        punctuation and spacing are left intact), and
+                        they also constitute the choices that can be
+                        used to form the all-element-content of the
+                        <element-citation> element (in which
+                        punctuation and spacing are removed).
+                        Design Note: All inline mixes begin with an
+                        OR bar.                                    -->
+<!ENTITY % citation-elements
+                        "%emphasis.class; | %inline-display.class; |
+                         %inline-math.class; |
+                         %phrase.class; | %references.class; |
+                         %subsup.class;"                             >
+
+
+<!--                    COLLABORATIVE (GROUP) AUTHOR ELEMENTS      -->
+<!--                    Elements for use in the <collab> element
+                        Design Note: All inline mixes begin with an
+                        OR bar, but since %rendition-plus; is an
+                        inline mix, the OR bar is already there.   -->
+<!ENTITY % collab-elements
+                        "%rendition-plus; | %address.class; |
+                         %contrib-info.class;"                       >
+
+
+<!--                    COMMENT ELEMENTS                           -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        the Comment in a Citation <comment> element.
+                        Design Note: All inline mixes begin with an
+                        OR bar, but since %simple-phrase; is an
+                        inline mix, the OR bar is already there.   -->
+<!ENTITY % comment-elements
+                        "| %address-link.class; |
+                         %article-link.class; | %emphasis.class; |
+                         %inline-display.class; |
+                         %inline-math.class; |
+                         %phrase.class; |
+                         %subsup.class;"                             >
+
+
+<!--                    CONFERENCE ACRONYM ELEMENTS                -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        the conference acronym.
+                        Design Note: All inline mixes begin with an
+                        OR bar, but since %simple-text; is an online
+                        mix, the OR bar is already there.          -->
+<!ENTITY % conf-acronym-elements
+                        ""                                           >
+
+
+<!--                    CONFERENCE LOCATION ELEMENTS               -->
+<!--                    Elements for use in the <conf-loc> element
+                        Removed %simple-text;                      -->
+<!ENTITY % conf-loc-elements
+                        "| %address.class;"                          >
+
+
+<!--                    CONFERENCE NAME ELEMENTS                   -->
+<!--                    Elements for use in the <conf-name> element.
+                        Removed %simple-text;                      -->
+<!ENTITY % conf-name-elements
+                        ""                                           >
+
+
+<!--                    CONFERENCE NUMBER ELEMENTS                 -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        the conference number.
+                        Design Note: All inline mixes begin with an
+                        OR bar, but since %simple-text; is an inline
+                        mix, the OR bar is already there.          -->
+<!ENTITY % conf-num-elements
+                        ""                                           >
+
+
+<!--                    CONFERENCE SPONSOR  ELEMENTS               -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        the conference sponsor.                    -->
+<!ENTITY % conf-sponsor-elements
+                        "| %institution-wrap.class;"                 >
+
+
+<!--                    CORRESPONDENCE INFORMATION ELEMENTS        -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        the correspondence information.            -->
+<!ENTITY % corresp-elements
+                        "| %address.class; | %address-link.class; |
+                         %emphasis.class; | %subsup.class;"          >
+
+
+<!--                    DEGREE(S) ELEMENTS                         -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        <degrees>                                  -->
+<!ENTITY % degrees-elements
+                        ""                                           >
+
+
+<!--                    FORMULA, DISPLAY ELEMENTS                  -->
+<!--                    Elements for use mixed with #PCDATA within
+                        the <disp-formula> element                 -->
+<!ENTITY % disp-formula-elements
+                         "| %access.class; | %address-link.class; |
+                          %break.class; | %emphasis.class; |
+                          %display-back-matter.class; |
+                          %inline-display.class; |
+                          %inline-math.class; | %label.class; |
+                          %math.class; | %simple-display.class; |
+                          %subsup.class;"                            >
+
+
+<!--                    EDITION ELEMENTS                           -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        <edition>                                  -->
+<!ENTITY % edition-elements
+                        "| %subsup.class;"                           >
+
+
+<!--                    FAX NUMBER ELEMENTS                        -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <fax>                                    -->
+<!ENTITY % fax-elements ""                                           >
+
+
+<!--                    FUNDING-SOURCE ELEMENTS                    -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        the <funding-source>                       -->
+<!ENTITY % funding-source-elements
+                        "| %institution-wrap.class;"                 >
+
+
+<!--                    GIVEN (FIRST) NAMES ELEMENTS               -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <given-names>                            -->
+<!ENTITY % given-names-elements
+                        ""                                           >
+
+
+<!--                    INSTITUTION NAME ELEMENTS                  -->
+<!--                    Elements for use in the <institution>
+                        element                                    -->
+<!ENTITY % institution-elements
+                        "| %subsup.class;"                           >
+
+
+<!--                    ISSUE TITLE ELEMENTS                       -->
+<!--                    Elements for use with data characters inside
+                        the model for the <issue> element          -->
+<!ENTITY % issue-elements
+                        ""                                           >
+
+
+<!--                    KEYWORD CONTENT ELEMENTS                   -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a keyword <kwd>.                           -->
+<!ENTITY % kwd-elements "| %emphasis.class; | %phrase.class; |
+                         %subsup.class;"                             >
+
+
+<!--                    LABEL ELEMENTS                             -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        the <label> element                        -->
+<!ENTITY % label-elements
+                        ""                                           >
+
+
+<!--                    PATENT NUMBER ELEMENTS                     -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        <patent>                                   -->
+<!ENTITY % patent-elements
+                        ""                                           >
+
+
+<!--                    PERSON GROUP MODEL                         -->
+<!--                    Content model for the <person-group> element
+                                                                   -->
+<!ENTITY % person-group-elements
+                        "| %name.class; | %person-group-info.class; |
+                          %string-name.class;"                       >
+
+
+<!--                    PHONE NUMBER ELEMENTS                      -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <phone number>                           -->
+<!ENTITY % phone-elements
+                        ""                                           >
+
+
+<!--                    PREFIX ELEMENTS                            -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <prefix>                                 -->
+<!ENTITY % prefix-elements
+                        ""                                           >
+
+
+<!--                    PREFORMATTED TEXT ELEMENTS                 -->
+<!--                    Elements that may be used, along with data
+                        characters, inside the content model for the
+                        <preformat> element, in which white space,
+                        such as tabs, line feeds, and spaces will
+                        be preserved                               -->
+<!ENTITY % preformat-elements
+                        "| %access.class; | %address-link.class; |
+                         %display-back-matter.class; |
+                         %emphasis.class; | %phrase.class; |
+                         %subsup.class;"                             >
+
+
+<!--                    PRODUCT ELEMENTS                           -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        the <product> element                      -->
+<!ENTITY % product-elements
+                        "| %article-link.class; | %emphasis.class; |
+                         %inline-display.class; |
+                         %inline-math.class; | %phrase.class; |
+                         %price.class; |
+                         %references.class; | %simple-link.class; |
+                         %subsup.class;"                             >
+
+
+<!--                    PUBLISHER'S LOCATION ELEMENTS              -->
+<!--                    Elements for use in the Publisher Location
+                        <publisher-loc> element                    -->
+<!ENTITY % publisher-loc-elements
+                        "| %address.class;"                          >
+
+
+<!--                    PUBLISHER'S NAME ELEMENTS                  -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <publisher-name>                         -->
+<!ENTITY % publisher-name-elements
+                        "| %institution-wrap.class;"                 >
+
+
+<!--                    ROLE ELEMENTS                              -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <role>
+                        Design Note: All inline mixes begin with an
+                        OR bar; since %rendition-plus; is an
+                        inline mix, the OR bar is already there.   -->
+<!ENTITY % role-elements
+                        ""                                           >
+
+
+<!--                    SUFFIX ELEMENTS                            -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <suffix>                                 -->
+<!ENTITY % suffix-elements
+                        ""                                           >
+
+
+<!--                    SOURCE ELEMENTS                            -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <source>.                                -->
+<!ENTITY % source-elements
+                        "| %emphasis.class; | %address-link.class; |
+                         %subsup.class;"                             >
+
+
+<!--                    STANDARDS ORGANIZATION ELEMENTS            -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        <std-organization>.
+                        Removed emphasis.class.                    -->
+<!ENTITY % std-organization-elements
+                        "| %institution-wrap.class; | %subsup.class;">
+
+
+<!--                    SURNAME ELEMENTS                           -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <surname>                                -->
+<!ENTITY % surname-elements
+                        ""                                           >
+
+
+<!--                    DEFINITION LIST: TERM ELEMENTS             -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <term>.
+                        Design Note: All inline mixes begin with an
+                        OR bar, but since %simple-phrase; is an
+                        inline mix, the OR bar is already there.   -->
+<!ENTITY % term-elements
+                        "| %address-link.class; |
+                         %article-link.class; | %emphasis.class; |
+                         %inline-display.class; |
+                         %inline-math.class; | %phrase.class; |
+                         %simple-link.class; | %subsup.class;"       >
+
+
+<!--                    URI ELEMENTS                               -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <uri>                                    -->
+<!ENTITY % uri-elements
+                        ""                                           >
+
+
+<!--                    VERSION ELEMENTS                           -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        <version>                                  -->
+<!ENTITY % version-elements
+                        "| %subsup.class;"                           >
+
+
+
+<!--                    VOLUME NUMBER ELEMENTS                     -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        a <volume>                                 -->
+<!ENTITY % volume-elements
+                        ""                                           >
+
+
+<!-- ============================================================= -->
+<!--                    OVER-RIDES USED IN SHARED CONTENT MODELS   -->
+<!-- ============================================================= -->
+
+
+<!--                    DISPLAY ELEMENT BACK MATTER SEQUENCE       -->
+<!--                    Miscellaneous stuff at the end of a display
+                        element such as a figure or a boxed text
+                        element such as a sidebar                  -->
+<!ENTITY % display-back-matter
+                        "attrib?, permissions?"                      >
+
+
+<!-- ============================================================= -->
+<!--                    OVER-RIDES OF SHARED CONTENT MODELS (FULL) -->
+<!-- ============================================================= -->
+
+
+<!--                    CONTENT MODEL FOR A STRUCTURAL SECTION     -->
+<!--                    The model for a section that requires that a
+                        section title be present, used for elements
+                        such as Section and Appendix.              -->
+<!ENTITY % sec-model    "(title, (%para-level;)*, (%sec-level;)* )"  >
+
+
+<!--                    CONTENT MODEL FOR AN UNTITLED SECTION      -->
+<!--                    The model for a section-like structure that
+                        may or may not have an initial title       -->
+<!ENTITY % sec-opt-title-model
+                        "(title?, (%para-level;)*, (%sec-level;)* )" >
+
+
+<!-- ============================================================= -->
+<!--                    OVER-RIDES OF CONTENT MODELS (FULL MODELS) -->
+<!-- ============================================================= -->
+
+
+<!--                    ABSTRACT MODEL                             -->
+<!--                    Abstracts may contain one or more paragraphs
+                        (as a typical abstract does) or titled
+                        sections, as is done in many physics
+                        articles.                                  -->
+<!ENTITY % abstract-model
+                        "(title?, (%just-para.class;)*, %sec.class;*)"
+                                                                     >
+
+
+<!--                    ACKNOWLEDGMENTS MODEL                      -->
+<!--                    Content model for the <ack> element
+                        Deleted optional sections and closing
+                        reference list                             -->
+<!ENTITY % ack-model    "(title?, (%just-para.class;)*)"             >
+
+
+<!--                    ANONYMOUS MODEL                            -->
+<!--                    Content model for the element <anonymous>.
+                        When present, it is used to generate the text
+                        "anonymous" or "anon.", etc.               -->
+<!ENTITY % anonymous-model
+                        "EMPTY"                                      >
+
+
+<!--                    ADDRESS MODEL                              -->
+<!--                    Content model for the <address> element    -->
+<!ENTITY % address-model
+                        "((%institution-wrap.class;)*, addr-line*,
+                          city?, state?, postal-code?,
+                          country, phone*, fax*, email*, ext-link*, 
+                          uri*)"                                     >
+
+
+<!--                    APPENDIX GROUP MODEL                       -->
+<!--                    Content model for the <app-group> element  -->
+<!ENTITY % app-group-model
+                        "(title?, (%just-para.class;)*, 
+                          (%app.class;)* )"                          >
+
+
+<!--                    ARTICLE METADATA MODEL                     -->
+<!--                    Full content model for the metadata that is
+                        specific to the article.                   -->
+<!ENTITY % article-meta-model
+                        "(title-group, contrib-group,
+                          (product | supplementary-material)*,
+                          permissions?, self-uri*, 
+                          (%related-article.class;)*, 
+                          (%abstract.class;)+, (%kwd-group.class;)*,
+                          funding-group*,
+                          conference*)"                              >
+
+
+<!--                    BOXED TEXT MODEL                           -->
+<!--                    Complete content model for the boxed text
+                        element which is used for sidebars,
+                        marginalia, and other text that is outside
+                        the narrative flow.                        -->
+<!ENTITY % boxed-text-model
+                        "((%id.class;)*, caption?, (%para-level;)*,
+                          (%sec-level;)*, %display-back-matter; )"   >
+
+
+<!--                    CHEMICAL STRUCTURE WRAPPER MODEL           -->
+<!--                    Content model for the Chemical Structure
+                        Wrapper <chem-struct-wrap> element         -->
+<!ENTITY % chem-struct-wrap-model
+                        "((%id.class;)*, (%caption.class;)?,
+                          (%access.class;)*,
+                          (%inside-chem-struct-wrap.class;)+,
+                          %display-back-matter;)"                    >
+
+
+<!--                    CONFERENCE MODEL                           -->
+<!--                    The element components that describe
+                        of a conference                            -->
+<!ENTITY % conference-model
+                        "(conf-date, (conf-name | conf-acronym )+,
+                          conf-num?, conf-loc?, conf-sponsor*,
+                          conf-theme?)"                              >
+
+
+<!--                    CONTRIBUTOR MODEL                          -->
+<!--                    Content model for the <contrib> element    -->
+<!ENTITY % contrib-model
+                        "((%contrib-id.class;)*, (%name.class;)*, 
+                          (%degree.class;)*, role?, on-behalf-of?,
+                          (%aff-alternatives.class;)*, address*,
+                          email*, ext-link*, uri*, bio?,
+                          author-comment?)"                          >
+
+
+<!--                    CONTRIBUTOR GROUP MODEL                    -->
+<!--                    Content model for the <contrib-group>
+                        element                                    -->
+<!ENTITY % contrib-group-model
+                        "(%contrib.class;+)"                         >
+
+
+<!--                    DATE ELEMENTS MODEL                        -->
+<!--                    The content models for elements that describe
+                        dates, such as Publication Date <pub-date> and
+                        History Dates <date>.  The <string-date>
+                        element holds dates for which months and
+                        years are not given, for example "first
+                        quarter", "spring", etc.                   -->
+<!ENTITY % date-model
+                        "(((day?, month?) | season)?, year, era?)"   >
+
+
+<!--                    DEFINITION LIST MODEL                      -->
+<!--                    Content model for the <def-list> element   -->
+<!ENTITY % def-list-model
+                        "(title?, term-head?, def-head?, 
+                          (%def-item.class;)+)"                      >
+
+
+<!--                    DEFINITION LIST: DEFINITION ITEM ELEMENTS  -->
+<!--                    The elements that can be included inside
+                        the content model of a <def-item>          -->
+<!ENTITY % def-item-model
+                        "(term, def*)"                               >
+
+
+<!--                    FORMULA, DISPLAY GROUP MODEL               -->
+<!--                    Content model for an <disp-formula-group>  -->
+<!ENTITY % disp-formula-group-model
+                        "(label?, (%caption.class;)?,
+                          (%access.class; | %address-link.class;)*,
+                          (%block-math.class;)* )"                   >
+
+
+<!--                    QUOTE, DISPLAYED MODEL                     -->
+<!--                    Content model for the Display Quote element-->
+<!ENTITY % disp-quote-model
+                        "(title?, (%just-para.class;)+, 
+                          %display-back-matter; )"                   >
+
+<!--                    FIGURE-LIKE CONTENT MODEL                  -->
+<!--                    Content model for the Figure element and any
+                        similarly structured elements              -->
+<!ENTITY % fig-model    "((%id.class;)*, (%caption.class;)?,
+                          (%access.class;)*,
+                          (%block-math.class; |
+                           %chem-struct-wrap.class; |
+                           %intable-para.class; |
+                           %just-table.class; | %just-para.class; |
+                           %list.class; | %simple-display.class;)*,
+                          %display-back-matter; )"                   >
+
+
+<!--                    FOOTNOTE GROUP MODEL                       -->
+<!--                    Content model for the <fn-group> element   -->
+<!ENTITY % fn-group-model
+                        "(title?, (%fn-link.class;)+ )"              >
+
+
+<!--                    FOOTNOTE MODEL                             -->
+<!--                    Content model for Footnote <fn>            -->
+<!ENTITY % fn-model     "((%just-para.class;)+ )"                    >
+
+
+<!--                    GLOSSARY MODEL                             -->
+<!--                    Content model for the <glossary> element   -->
+<!ENTITY % glossary-model
+                        "(title?, (%just-para.class;)*, def-list*, 
+                          glossary* )"        >
+
+
+<!--                    GRAPHIC MODEL                              -->
+<!--                    Content model for the <graphic> element    -->
+<!ENTITY % graphic-model
+                        "((%id.class;)?, (%access.class;)*,
+                          (%display-back-matter;)*) "                >
+
+
+<!--                    KEYWORD GROUP MODEL                        -->
+<!--                    Content model for a <kwd-group> element    -->
+<!ENTITY % kwd-group-model
+                        "(title?, (%kwd.class;)+ )"                  >
+
+
+<!--                    LIST ITEM ELEMENTS                         -->
+<!--                    The elements that can be included inside
+                        the content model of a <list-item>         -->
+<!ENTITY % list-item-model
+                        "(label?, title?, 
+                          (%just-para.class; | %list.class;)+ )"     >
+
+
+<!--                    LIST MODEL                                 -->
+<!--                    Content model for the <list> element       -->
+<!ENTITY % list-model   "(title?, (%list-item.class;)+)"             >
+
+
+<!--                    MEDIA MODEL                                -->
+<!--                    Content model for the <media> element      -->
+<!ENTITY % media-model  "((%id.class;)?, (%access.class;)*,
+                          (%display-back-matter;)*) "                >
+
+
+<!--                    ON BEHALF OF CONTENT ELEMENTS              -->
+<!--                    The elements that can be included along with
+                        data characters inside the content model of
+                        <on-behalf-of>
+                        Design Note: -%rendition-plus; begins with
+                        an OR bar, so this inline mix beguines with
+                        an OR bar.                                 -->
+<!ENTITY % on-behalf-of-elements
+                        "%rendition-plus; | %institution-wrap.class; |
+                         %simple-link.class;"                        >
+
+
+
+<!--                    REFERENCE LIST MODEL                       -->
+<!--                    Content model for the <ref-list> element   -->
+<!ENTITY % ref-list-model
+                        "(title?, (%just-para.class;)*, ref+)"       >
+
+
+<!--                    REFERENCE ITEM MODEL
+                        Model for the <ref> element                -->
+<!ENTITY % ref-model    "(%citation.class;)+"                        >
+
+
+<!--                    STATEMENT, FORMAL MODEL                    -->
+<!--                    Content model for the <statement> element  -->
+<!ENTITY % statement-model
+                        "(label?, title?, 
+                          (%just-para.class; | %statement.class;)+,
+                          (%display-back-matter.class;)*)"           >
+
+
+<!--                    SUPPLEMENTARY MATERIAL MODEL               -->
+<!--                    Content model for the
+                        <supplementary-material> element           -->
+<!ENTITY % supplementary-material-model
+                        "((%id.class;)*, (%caption.class;)?,
+                          (%access.class; | %address-link.class;)*,
+                          (%just-para.class;)*,
+                          %display-back-matter; )"                   >
+
+
+<!--                    TABLE WRAPPER CONTENT MODEL                -->
+<!--                    Content model for the container element that
+                        surrounds the standard table models for row
+                        and columns.                               -->
+<!ENTITY % table-wrap-model
+                        "((%id.class;)*, (%caption.class;)?,
+                          (%access.class;)*,
+                          (%inside-table-wrap;)*,
+                          %table-foot.class;?,
+                          %display-back-matter; )"                   >
+
+
+<!--                    TITLE GROUP MODEL                          -->
+<!--                    Content model for the <title-group> element-->
+<!ENTITY % title-group-model
+                        "(article-title, subtitle?)"                 >
+
+
+<!--                    TRANSLATED ABSTRACT MODEL                  -->
+<!--                    Content model for an <trans-abstract> element.
+                                                                   -->
+<!ENTITY % trans-abstract-model
+                        "(title?, (%just-para.class;)*, %sec.class;*)"
+                                                                     >
+
+
+<!--                    VERSE GROUP MODEL                          -->
+<!--                    Content model for the <verse-group> element-->
+<!ENTITY % verse-group-model
+                        "(title?, subtitle?, verse-line+,
+                          %display-back-matter; ) "                  >
+
+
+<!-- ============================================================= -->
+<!--                    OVER-RIDES OF ATTRIBUTE VALUES             -->
+<!-- ============================================================= -->
+
+
+<!--                    FOOTNOTE TYPE VALUES                       -->
+<!--                    Used to mark the semantics of the footnote,
+                        what information does this footnote convey.
+                                                                   -->
+<!ENTITY % fn-types     "abbr | com | con | conflict |
+                         corresp | current-aff | deceased |
+                         edited-by | equal |
+                         financial-disclosure | on-leave |
+                         participating-researchers |
+                         presented-at | presented-by |
+                         present-address | previously-at |
+                         study-group-members |
+                         supplementary-material |
+                         supported-by | other"                       >
+
+
+<!--                    LIST PREFIX TYPES                          -->
+<!--                    Used to request a specific style of prefix
+                        characters for the items in lists and
+                        de-lists. Ordered is number or letters,
+                        bulleted is bullets or other non-ordered
+                        character, simple has no prefix at all.    -->
+<!ENTITY % list-types   "bullet | order | simple"                    >
+
+
+<!--                    CROSS(X)-REFERENCE TYPE VALUES             -->
+<!--                    Used to say to what the reference is pointing.
+                        May be used for type-specific processing or
+                        validation. Values are, for example:
+                        Affiliation "aff" and Figure "fig", and
+                        Bibliographic ref (to a citation.          -->
+<!ENTITY % ref-types    "aff | app | bibr | boxed-text | chem | 
+                         collab | contrib | corresp |
+                         disp-formula | fig | fn | kwd | list |
+                         plate | scheme | sec | statement |
+                         supplementary-material |
+                         table | table-fn |
+                         other"                                      >
+
+
+<!-- ============================================================= -->
+<!--                    DUPLICATE ATTRIBUTE DECLARATIONS           -->
+<!--                    (These are unchanged from the base Suite,  -->
+<!--                    but are used in attribute over-rides below)-->
+<!-- ============================================================= -->
+
+
+<!--                    COMMON ATTRIBUTES                          -->
+<!--                    These lists of attributes will be added to 
+                        nearly every element, in both the document 
+                        metadata and the document body, of the entire 
+                        Tag Set:
+                          - including table elements for both the 
+                              XHTML-inspired and OASIS-inspired
+                              table model elements
+                          - excluding only <mml:math> and 
+                              <xi:include> (whose namespaces JATS
+                              does not control).
+                           Great care should be taken to use these
+                        attributes judiciously, not as a shortcut to
+                        thinking through where an attribute should be
+                        used. Potential use cases include adding
+                        @xml:lang or some RDFa attribute to every 
+                        elements.                                  -->
+
+
+<!--                    BASE ATTRIBUTES                            -->
+<!--                    Holds all the common attributes except @id.
+                        Used to keep the two common attribute lists 
+                        in sync. To add a global attribute, modify
+                        this list.                                 -->
+<!ENTITY % jats-base-atts
+            "xml:base   CDATA                             #IMPLIED"  >
+
+
+<!--                    COMMON ATTRIBUTES                          -->
+<!--                    Holds all the common attributes, as defined in
+                        the base attribute parameter entity, plus an
+                        optional @id.                              -->
+<!ENTITY % jats-common-atts
+            "id         ID                                #IMPLIED 
+             %jats-base-atts;"                                       >
+
+
+<!--                    COMMON ATTRIBUTES                          -->
+<!--                    Holds all the common attributes, as defined in
+                        the base attribute parameter entity, plus a 
+                        required @id.                              -->
+<!ENTITY % jats-common-atts-id-required
+            "id         ID                                #REQUIRED
+             %jats-base-atts;"                                       >
+
+
+<!--                    XLINK LINK ATTRIBUTES                      -->
+<!--                    Attributes for any element that must be a
+                        link                                       -->
+<!ENTITY % link-atts
+            "xmlns:xlink CDATA                            #IMPLIED
+             xlink:type  (simple)                         #IMPLIED
+             xlink:href  CDATA                            #REQUIRED
+             xlink:role  CDATA                            #IMPLIED
+             xlink:title CDATA                            #IMPLIED
+             xlink:show  (embed | new | none | other | replace)
+                                                          #IMPLIED
+             xlink:actuate
+                         (none | onLoad | onRequest | other)
+                                                          #IMPLIED"  >
+
+
+<!--                    MIGHT LINK XLINK ATTRIBUTES                -->
+<!--                    Attributes for any element that may be a link
+                        but need not be one                        -->
+<!ENTITY % might-link-atts
+            "xmlns:xlink CDATA                            #IMPLIED
+             xlink:type  (simple)                         #IMPLIED
+             xlink:href  CDATA                            #IMPLIED
+             xlink:role  CDATA                            #IMPLIED
+             xlink:title CDATA                            #IMPLIED
+             xlink:show  (embed | new | none | other | replace)
+                                                          #IMPLIED
+             xlink:actuate
+                         (none | onLoad | onRequest | other)
+                                                          #IMPLIED"  >
+
+
+<!-- ============================================================= -->
+<!--                    OVER-RIDES OF ATTRIBUTE LISTS              -->
+<!-- ============================================================= -->
+
+
+<!--                    COLLABORATION ATTRIBUTES                   -->
+<!--                    Attributes for <collab>                    -->
+<!ENTITY % collab-atts
+            "%jats-common-atts;                                        
+             collab-type
+                        CDATA                             #IMPLIED
+             specific-use
+                        CDATA                             #IMPLIED
+             xml:lang   NMTOKEN                           #IMPLIED
+             %might-link-atts;"                                      >
+
+
+<!--                    FOOTNOTE ATTRIBUTES                        -->
+<!--                    Attribute list for Footnote element        -->
+<!ENTITY % fn-atts
+            "%jats-common-atts;                                       
+             fn-type    (%fn-types;)                      #IMPLIED
+             specific-use
+                        CDATA                             #IMPLIED
+             xml:lang   NMTOKEN                           #IMPLIED"  >
+
+
+<!--                    INLINE GRAPHIC ATTRIBUTES                  -->
+<!--                    Attributes for Inline Graphic
+                        <inline-graphic>                           -->
+<!ENTITY % inline-graphic-atts
+            "%jats-common-atts;                                       
+             baseline-shift
+                        CDATA                             #IMPLIED
+             mimetype   CDATA                        #FIXED 'image'
+             mime-subtype
+                        (cgm | gif | jpeg | png | tiff)   #IMPLIED
+             specific-use
+                        CDATA                             #IMPLIED
+             xml:lang   NMTOKEN                           #IMPLIED
+             %link-atts;"                                           >
+
+
+<!--                    DEFAULT LIST CLASS ATTRIBUTES              -->
+<!--                    Default attribute lists to be used for most
+                        of the types of lists. Used for the <list>
+                        element and <def-list> element.            -->
+<!ENTITY % list-atts
+            "%jats-common-atts;                                       
+             continued-from
+                        IDREF                             #IMPLIED
+             list-type  (%list-types;)                    #IMPLIED
+             prefix-word
+                        CDATA                             #IMPLIED
+             list-content
+                        CDATA                             #IMPLIED
+             specific-use
+                        CDATA                             #IMPLIED
+             xml:lang   NMTOKEN                           #IMPLIED"  >
+
+
+
+<!--                    PERSON GROUP ATTRIBUTES                    -->
+<!--                    Attributes for the <person-group> element  -->
+<!ENTITY % person-group-atts
+            "%jats-common-atts;                                       
+             person-group-type
+                        (allauthors | assignee | author | compiler |
+                         curator | director | editor | guest-editor |
+                         inventor | translator | transed) #IMPLIED
+             specific-use
+                        CDATA                             #IMPLIED
+             xml:lang   NMTOKEN                           #IMPLIED"  >
+
+
+<!--                    SECTION ATTRIBUTES                         -->
+<!--                    Attributes for the <sec> element           -->
+<!ENTITY % sec-atts
+            "%jats-common-atts;                                       
+             sec-type   CDATA                             #IMPLIED
+             specific-use
+                        CDATA                             #IMPLIED
+             xml:lang   NMTOKEN                           #IMPLIED"  >
+
+
+<!--                    UNDERLINE ATTRIBUTES                       -->
+<!--                    Attributes for the <underline> element     -->
+<!ENTITY % underline-atts
+            "%jats-common-atts;                                       
+             toggle     (yes | no)                        #IMPLIED
+             specific-use
+                        CDATA                             #IMPLIED" >
+
+
+<!-- ================== End Authoring Over-ride Content/ATTLIST == -->