ojxv 0.0.2 → 1.0.0

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Files changed (913) hide show
  1. checksums.yaml +4 -4
  2. data/README.md +77 -2
  3. data/lib/ojxv/crossref_metadata_file.rb +49 -0
  4. data/lib/ojxv/jats_file.rb +64 -0
  5. data/lib/ojxv/schemas/crossref/AccessIndicators.xsd +64 -0
  6. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-3d2-mathml3-elements.xsd +10130 -0
  7. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-3d2-mathml3.xsd +48 -0
  8. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-elements.xsd +8705 -0
  9. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-mathml3-elements.xsd +8608 -0
  10. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-mathml3.xsd +49 -0
  11. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1.xsd +6176 -0
  12. data/lib/ojxv/schemas/crossref/NLM.JATS2CrossRef.v1.0.xsl +554 -0
  13. data/lib/ojxv/schemas/crossref/NLM2CrossRef.xsl +577 -0
  14. data/lib/ojxv/schemas/crossref/OAI-PMH.cr.xsd +280 -0
  15. data/lib/ojxv/schemas/crossref/OAI-PMH.xsd +317 -0
  16. data/lib/ojxv/schemas/crossref/clinicaltrials.xsd +61 -0
  17. data/lib/ojxv/schemas/crossref/common4.8.0.xsd +1606 -0
  18. data/lib/ojxv/schemas/crossref/common4.8.1.xsd +1606 -0
  19. data/lib/ojxv/schemas/crossref/common5.1.0.xsd +1606 -0
  20. data/lib/ojxv/schemas/crossref/common5.2.0.xsd +1606 -0
  21. data/lib/ojxv/schemas/crossref/common5.3.0.xsd +1606 -0
  22. data/lib/ojxv/schemas/crossref/common5.3.1.xsd +1606 -0
  23. data/lib/ojxv/schemas/crossref/crossref4.8.0.xsd +2042 -0
  24. data/lib/ojxv/schemas/crossref/crossref4.8.1.xsd +2042 -0
  25. data/lib/ojxv/schemas/crossref/crossref5.1.0.xsd +2075 -0
  26. data/lib/ojxv/schemas/crossref/crossref5.2.0.xsd +2077 -0
  27. data/lib/ojxv/schemas/crossref/crossref5.3.0.xsd +2065 -0
  28. data/lib/ojxv/schemas/crossref/crossref5.3.1.xsd +2065 -0
  29. data/lib/ojxv/schemas/crossref/crossref_citations_1.0.0.xsd +48 -0
  30. data/lib/ojxv/schemas/crossref/crossref_output3.0.0.xsd +1124 -0
  31. data/lib/ojxv/schemas/crossref/crossref_output3.0.1.xsd +1949 -0
  32. data/lib/ojxv/schemas/crossref/crossref_query_input1.0.xsd +587 -0
  33. data/lib/ojxv/schemas/crossref/crossref_query_input2.0.xsd +845 -0
  34. data/lib/ojxv/schemas/crossref/crossref_query_output1.0.xsd +499 -0
  35. data/lib/ojxv/schemas/crossref/crossref_query_output2.0.xsd +1052 -0
  36. data/lib/ojxv/schemas/crossref/crossref_query_output3.0.xsd +1169 -0
  37. data/lib/ojxv/schemas/crossref/fundref.xsd +85 -0
  38. data/lib/ojxv/schemas/crossref/fundrefoutput.xsd +38 -0
  39. data/lib/ojxv/schemas/crossref/grant_id0.0.1.xsd +1076 -0
  40. data/lib/ojxv/schemas/crossref/grant_id0.0.2.xsd +1076 -0
  41. data/lib/ojxv/schemas/crossref/grant_id0.1.0.xsd +1077 -0
  42. data/lib/ojxv/schemas/crossref/module-ali.xsd +47 -0
  43. data/lib/ojxv/schemas/crossref/oai-identifier.xsd +47 -0
  44. data/lib/ojxv/schemas/crossref/openAI.xsd +24 -0
  45. data/lib/ojxv/schemas/crossref/relations.xsd +426 -0
  46. data/lib/ojxv/schemas/crossref/rfc1807.xsd +53 -0
  47. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-common.xsd +101 -0
  48. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-content.xsd +683 -0
  49. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-presentation.xsd +2092 -0
  50. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-strict-content.xsd +186 -0
  51. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3.xsd +9 -0
  52. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/module-ali.xsd +47 -0
  53. data/lib/ojxv/schemas/crossref/standard-modules/module-ali.xsd +47 -0
  54. data/lib/ojxv/schemas/crossref/standard-modules/xlink.xsd +100 -0
  55. data/lib/ojxv/schemas/crossref/standard-modules/xml.xsd +287 -0
  56. data/lib/ojxv/schemas/crossref/unixref1.0.xsd +2433 -0
  57. data/lib/ojxv/schemas/crossref/unixref1.1.xsd +3240 -0
  58. data/lib/ojxv/schemas/crossref/xml.xsd +287 -0
  59. data/lib/ojxv/schemas/jats/1.0/JATS-XHTMLtablesetup1.ent +342 -0
  60. data/lib/ojxv/schemas/jats/1.0/JATS-archive-oasis-article1.dtd +734 -0
  61. data/lib/ojxv/schemas/jats/1.0/JATS-archive-oasis-custom-classes1.ent +271 -0
  62. data/lib/ojxv/schemas/jats/1.0/JATS-archive-oasis-custom-modules1.ent +221 -0
  63. data/lib/ojxv/schemas/jats/1.0/JATS-archivearticle1.dtd +695 -0
  64. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-classes1.ent +242 -0
  65. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-mixes1.ent +357 -0
  66. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-models1.ent +1119 -0
  67. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-modules1.ent +216 -0
  68. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-classes1.ent +306 -0
  69. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-mixes1.ent +278 -0
  70. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-models1.ent +1032 -0
  71. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-modules1.ent +200 -0
  72. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthoring1.dtd +519 -0
  73. data/lib/ojxv/schemas/jats/1.0/JATS-articlemeta1.ent +1663 -0
  74. data/lib/ojxv/schemas/jats/1.0/JATS-backmatter1.ent +318 -0
  75. data/lib/ojxv/schemas/jats/1.0/JATS-chars1.ent +455 -0
  76. data/lib/ojxv/schemas/jats/1.0/JATS-common1.ent +3622 -0
  77. data/lib/ojxv/schemas/jats/1.0/JATS-default-classes1.ent +1049 -0
  78. data/lib/ojxv/schemas/jats/1.0/JATS-default-mixes1.ent +390 -0
  79. data/lib/ojxv/schemas/jats/1.0/JATS-display1.ent +837 -0
  80. data/lib/ojxv/schemas/jats/1.0/JATS-format1.ent +551 -0
  81. data/lib/ojxv/schemas/jats/1.0/JATS-funding1.ent +467 -0
  82. data/lib/ojxv/schemas/jats/1.0/JATS-journalmeta1.ent +371 -0
  83. data/lib/ojxv/schemas/jats/1.0/JATS-journalpub-oasis-custom-classes1.ent +291 -0
  84. data/lib/ojxv/schemas/jats/1.0/JATS-journalpub-oasis-custom-modules1.ent +222 -0
  85. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-classes1.ent +258 -0
  86. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-mixes1.ent +195 -0
  87. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-models1.ent +752 -0
  88. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-modules1.ent +201 -0
  89. data/lib/ojxv/schemas/jats/1.0/JATS-journalpublishing-oasis-article1.dtd +718 -0
  90. data/lib/ojxv/schemas/jats/1.0/JATS-journalpublishing1.dtd +691 -0
  91. data/lib/ojxv/schemas/jats/1.0/JATS-link1.ent +344 -0
  92. data/lib/ojxv/schemas/jats/1.0/JATS-list1.ent +403 -0
  93. data/lib/ojxv/schemas/jats/1.0/JATS-math1.ent +318 -0
  94. data/lib/ojxv/schemas/jats/1.0/JATS-mathmlsetup1.ent +281 -0
  95. data/lib/ojxv/schemas/jats/1.0/JATS-modules1.ent +481 -0
  96. data/lib/ojxv/schemas/jats/1.0/JATS-nlmcitation1.ent +215 -0
  97. data/lib/ojxv/schemas/jats/1.0/JATS-notat1.ent +208 -0
  98. data/lib/ojxv/schemas/jats/1.0/JATS-oasis-namespace1.ent +181 -0
  99. data/lib/ojxv/schemas/jats/1.0/JATS-oasis-tablesetup1.ent +295 -0
  100. data/lib/ojxv/schemas/jats/1.0/JATS-para1.ent +395 -0
  101. data/lib/ojxv/schemas/jats/1.0/JATS-phrase1.ent +431 -0
  102. data/lib/ojxv/schemas/jats/1.0/JATS-publishing1.dtd +691 -0
  103. data/lib/ojxv/schemas/jats/1.0/JATS-references1.ent +1001 -0
  104. data/lib/ojxv/schemas/jats/1.0/JATS-related-object1.ent +214 -0
  105. data/lib/ojxv/schemas/jats/1.0/JATS-section1.ent +238 -0
  106. data/lib/ojxv/schemas/jats/1.0/JATS-xmlspecchars1.ent +343 -0
  107. data/lib/ojxv/schemas/jats/1.0/iso8879/isobox.ent +61 -0
  108. data/lib/ojxv/schemas/jats/1.0/iso8879/isocyr1.ent +88 -0
  109. data/lib/ojxv/schemas/jats/1.0/iso8879/isocyr2.ent +47 -0
  110. data/lib/ojxv/schemas/jats/1.0/iso8879/isodia.ent +35 -0
  111. data/lib/ojxv/schemas/jats/1.0/iso8879/isolat1.ent +83 -0
  112. data/lib/ojxv/schemas/jats/1.0/iso8879/isolat2.ent +142 -0
  113. data/lib/ojxv/schemas/jats/1.0/iso8879/isonum.ent +97 -0
  114. data/lib/ojxv/schemas/jats/1.0/iso8879/isopub.ent +105 -0
  115. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsa.ent +167 -0
  116. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsb.ent +143 -0
  117. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsc.ent +43 -0
  118. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsn.ent +114 -0
  119. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamso.ent +73 -0
  120. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsr.ent +204 -0
  121. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isogrk3.ent +64 -0
  122. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isomfrk.ent +75 -0
  123. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isomopf.ent +49 -0
  124. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isomscr.ent +75 -0
  125. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isotech.ent +182 -0
  126. data/lib/ojxv/schemas/jats/1.0/mathml/mmlalias.ent +564 -0
  127. data/lib/ojxv/schemas/jats/1.0/mathml/mmlextra.ent +122 -0
  128. data/lib/ojxv/schemas/jats/1.0/mathml2-qname-1.mod +286 -0
  129. data/lib/ojxv/schemas/jats/1.0/mathml2.dtd +2206 -0
  130. data/lib/ojxv/schemas/jats/1.0/oasis-exchange.ent +399 -0
  131. data/lib/ojxv/schemas/jats/1.0/xhtml-inlstyle-1.mod +34 -0
  132. data/lib/ojxv/schemas/jats/1.0/xhtml-table-1.mod +333 -0
  133. data/lib/ojxv/schemas/jats/1.0/xmlchars/isogrk1.ent +70 -0
  134. data/lib/ojxv/schemas/jats/1.0/xmlchars/isogrk2.ent +41 -0
  135. data/lib/ojxv/schemas/jats/1.0/xmlchars/isogrk4.ent +66 -0
  136. data/lib/ojxv/schemas/jats/1.1/JATS-XHTMLtablesetup1.ent +501 -0
  137. data/lib/ojxv/schemas/jats/1.1/JATS-ali-namespace1.ent +154 -0
  138. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-article1-mathml3.dtd +911 -0
  139. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-article1.dtd +894 -0
  140. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-custom-classes1.ent +326 -0
  141. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-custom-modules1.ent +269 -0
  142. data/lib/ojxv/schemas/jats/1.1/JATS-archivearticle1-mathml3.dtd +867 -0
  143. data/lib/ojxv/schemas/jats/1.1/JATS-archivearticle1.dtd +854 -0
  144. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-classes1.ent +291 -0
  145. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-mixes1.ent +420 -0
  146. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-models1.ent +1339 -0
  147. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-modules1.ent +266 -0
  148. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-classes1.ent +384 -0
  149. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-mixes1.ent +321 -0
  150. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-models1.ent +1269 -0
  151. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-modules1.ent +249 -0
  152. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthoring1-mathml3.dtd +669 -0
  153. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthoring1.dtd +655 -0
  154. data/lib/ojxv/schemas/jats/1.1/JATS-articlemeta1.ent +1817 -0
  155. data/lib/ojxv/schemas/jats/1.1/JATS-backmatter1.ent +393 -0
  156. data/lib/ojxv/schemas/jats/1.1/JATS-chars1.ent +525 -0
  157. data/lib/ojxv/schemas/jats/1.1/JATS-common-atts1.ent +221 -0
  158. data/lib/ojxv/schemas/jats/1.1/JATS-common1.ent +4273 -0
  159. data/lib/ojxv/schemas/jats/1.1/JATS-default-classes1.ent +1277 -0
  160. data/lib/ojxv/schemas/jats/1.1/JATS-default-mixes1.ent +455 -0
  161. data/lib/ojxv/schemas/jats/1.1/JATS-display1.ent +1000 -0
  162. data/lib/ojxv/schemas/jats/1.1/JATS-format1.ent +858 -0
  163. data/lib/ojxv/schemas/jats/1.1/JATS-funding1.ent +547 -0
  164. data/lib/ojxv/schemas/jats/1.1/JATS-journalmeta1.ent +454 -0
  165. data/lib/ojxv/schemas/jats/1.1/JATS-journalpub-oasis-custom-classes1.ent +378 -0
  166. data/lib/ojxv/schemas/jats/1.1/JATS-journalpub-oasis-custom-modules1.ent +270 -0
  167. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-classes1.ent +337 -0
  168. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-mixes1.ent +258 -0
  169. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-models1.ent +979 -0
  170. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-modules1.ent +261 -0
  171. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing-oasis-article1-mathml3.dtd +889 -0
  172. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing-oasis-article1.dtd +872 -0
  173. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing1-mathml3.dtd +861 -0
  174. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing1.dtd +845 -0
  175. data/lib/ojxv/schemas/jats/1.1/JATS-link1.ent +416 -0
  176. data/lib/ojxv/schemas/jats/1.1/JATS-list1.ent +494 -0
  177. data/lib/ojxv/schemas/jats/1.1/JATS-math1.ent +402 -0
  178. data/lib/ojxv/schemas/jats/1.1/JATS-mathml3-mathmlsetup1.ent +350 -0
  179. data/lib/ojxv/schemas/jats/1.1/JATS-mathml3-modules1.ent +190 -0
  180. data/lib/ojxv/schemas/jats/1.1/JATS-mathmlsetup1.ent +348 -0
  181. data/lib/ojxv/schemas/jats/1.1/JATS-modules1.ent +584 -0
  182. data/lib/ojxv/schemas/jats/1.1/JATS-nlmcitation1.ent +285 -0
  183. data/lib/ojxv/schemas/jats/1.1/JATS-notat1.ent +269 -0
  184. data/lib/ojxv/schemas/jats/1.1/JATS-oasis-namespace1.ent +223 -0
  185. data/lib/ojxv/schemas/jats/1.1/JATS-oasis-tablesetup1.ent +409 -0
  186. data/lib/ojxv/schemas/jats/1.1/JATS-para1.ent +481 -0
  187. data/lib/ojxv/schemas/jats/1.1/JATS-phrase1.ent +502 -0
  188. data/lib/ojxv/schemas/jats/1.1/JATS-publishing1.dtd +845 -0
  189. data/lib/ojxv/schemas/jats/1.1/JATS-references1.ent +1205 -0
  190. data/lib/ojxv/schemas/jats/1.1/JATS-related-object1.ent +283 -0
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  192. data/lib/ojxv/schemas/jats/1.1/JATS-xmlspecchars1.ent +389 -0
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  194. data/lib/ojxv/schemas/jats/1.1/iso8879/isocyr1.ent +88 -0
  195. data/lib/ojxv/schemas/jats/1.1/iso8879/isocyr2.ent +47 -0
  196. data/lib/ojxv/schemas/jats/1.1/iso8879/isodia.ent +35 -0
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  210. data/lib/ojxv/schemas/jats/1.1/iso9573-13/isomscr.ent +75 -0
  211. data/lib/ojxv/schemas/jats/1.1/iso9573-13/isotech.ent +182 -0
  212. data/lib/ojxv/schemas/jats/1.1/mathml/mmlalias.ent +564 -0
  213. data/lib/ojxv/schemas/jats/1.1/mathml/mmlextra.ent +122 -0
  214. data/lib/ojxv/schemas/jats/1.1/mathml2-qname-1.mod +286 -0
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  216. data/lib/ojxv/schemas/jats/1.1/mathml3-qname1.mod +294 -0
  217. data/lib/ojxv/schemas/jats/1.1/mathml3.dtd +1682 -0
  218. data/lib/ojxv/schemas/jats/1.1/oasis-exchange.ent +449 -0
  219. data/lib/ojxv/schemas/jats/1.1/xhtml-inlstyle-1.mod +34 -0
  220. data/lib/ojxv/schemas/jats/1.1/xhtml-table-1.mod +333 -0
  221. data/lib/ojxv/schemas/jats/1.1/xmlchars/isogrk1.ent +70 -0
  222. data/lib/ojxv/schemas/jats/1.1/xmlchars/isogrk2.ent +41 -0
  223. data/lib/ojxv/schemas/jats/1.1/xmlchars/isogrk4.ent +66 -0
  224. data/lib/ojxv/schemas/jats/1.1d1/JATS-XHTMLtablesetup1.ent +421 -0
  225. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-article1-mathml3.dtd +829 -0
  226. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-article1.dtd +813 -0
  227. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-custom-classes1.ent +277 -0
  228. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-custom-modules1.ent +221 -0
  229. data/lib/ojxv/schemas/jats/1.1d1/JATS-archivearticle1-mathml3.dtd +791 -0
  230. data/lib/ojxv/schemas/jats/1.1d1/JATS-archivearticle1.dtd +775 -0
  231. data/lib/ojxv/schemas/jats/1.1d1/JATS-archivecustom-classes1.ent +242 -0
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  878. data/lib/ojxv/schemas/jats/1.3d1/JATS-section1.ent +428 -0
  879. data/lib/ojxv/schemas/jats/1.3d1/JATS-xmlspecchars1.ent +493 -0
  880. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isobox.ent +61 -0
  881. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isocyr1.ent +88 -0
  882. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isocyr2.ent +47 -0
  883. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isodia.ent +35 -0
  884. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isolat1.ent +83 -0
  885. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isolat2.ent +142 -0
  886. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isonum.ent +97 -0
  887. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isopub.ent +105 -0
  888. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamsa.ent +167 -0
  889. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamsb.ent +143 -0
  890. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamsc.ent +43 -0
  891. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamsn.ent +114 -0
  892. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamso.ent +73 -0
  893. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamsr.ent +204 -0
  894. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isogrk3.ent +64 -0
  895. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isomfrk.ent +75 -0
  896. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isomopf.ent +49 -0
  897. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isomscr.ent +75 -0
  898. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isotech.ent +182 -0
  899. data/lib/ojxv/schemas/jats/1.3d1/mathml/mmlalias.ent +564 -0
  900. data/lib/ojxv/schemas/jats/1.3d1/mathml/mmlextra.ent +122 -0
  901. data/lib/ojxv/schemas/jats/1.3d1/mathml2-qname-1.mod +286 -0
  902. data/lib/ojxv/schemas/jats/1.3d1/mathml2.dtd +2206 -0
  903. data/lib/ojxv/schemas/jats/1.3d1/mathml3-qname1.mod +294 -0
  904. data/lib/ojxv/schemas/jats/1.3d1/mathml3.dtd +1682 -0
  905. data/lib/ojxv/schemas/jats/1.3d1/oasis-exchange.ent +487 -0
  906. data/lib/ojxv/schemas/jats/1.3d1/xhtml-inlstyle-1.mod +34 -0
  907. data/lib/ojxv/schemas/jats/1.3d1/xhtml-table-1.mod +333 -0
  908. data/lib/ojxv/schemas/jats/1.3d1/xmlchars/isogrk1.ent +70 -0
  909. data/lib/ojxv/schemas/jats/1.3d1/xmlchars/isogrk2.ent +41 -0
  910. data/lib/ojxv/schemas/jats/1.3d1/xmlchars/isogrk4.ent +66 -0
  911. data/lib/ojxv/version.rb +1 -1
  912. data/lib/ojxv.rb +7 -0
  913. metadata +928 -6
@@ -0,0 +1,1022 @@
1
+ <!-- ============================================================= -->
2
+ <!-- MODULE: Journal Archiving and Interchange DTD with OASIS -->
3
+ <!-- and XHTML Tables with MathML 3.0 -->
4
+ <!-- VERSION: ANSI/NISO JATS Version 1.2d2 (Z39.96-2015) -->
5
+ <!-- DATE: December 2017 -->
6
+ <!-- -->
7
+ <!-- ============================================================= -->
8
+
9
+ <!-- ============================================================= -->
10
+ <!-- PUBLIC DOCUMENT TYPE DEFINITION -->
11
+ <!-- TYPICAL INVOCATION -->
12
+ <!--
13
+ "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD with OASIS Tables with MathML3 v1.2d2 20180401//EN"
14
+ Delivered as file "JATS-archive-oasis-article1-mathml3.dtd"
15
+ Available at:
16
+ http://jats.nlm.nih.gov/archiving/1.1/JATS-archive-oasis-article1.dtd
17
+ -->
18
+ <!-- ============================================================= -->
19
+
20
+
21
+ <!-- ============================================================= -->
22
+ <!-- SYSTEM: Journal Archiving and Interchange DTD with -->
23
+ <!-- OASIS Tables of the JATS DTD Suite -->
24
+ <!-- -->
25
+ <!-- PURPOSE: DTD to describe a full-text journal article. -->
26
+ <!-- This model is an extension of the Journal -->
27
+ <!-- Archiving and Interchange DTD that contains -->
28
+ <!-- both the XHTML table and the CALS OASIS -->
29
+ <!-- Exchange Table models. -->
30
+ <!-- -->
31
+ <!-- The Journal Archiving and Interchange DTD is an -->
32
+ <!-- application of the ANSI/NISO Z39.96 JATS Journal -->
33
+ <!-- Article Tag Set. It describes journal articles -->
34
+ <!-- and some non-article material such as product -->
35
+ <!-- and book reviews for repository or interchange -->
36
+ <!-- purposes. It describes both the metadata for a -->
37
+ <!-- journal article and the full content of -->
38
+ <!-- the article. -->
39
+ <!-- -->
40
+ <!-- This DTD was constructed using the modules in the -->
41
+ <!-- JATS DTD Suite, using almost no customization -->
42
+ <!-- beyond the addition of the OASIS Table Model. -->
43
+ <!-- -->
44
+ <!-- TAG SET SPONSOR -->
45
+ <!-- National Center for Biotechnology -->
46
+ <!-- Information (NCBI) -->
47
+ <!-- National Library of Medicine (NLM) -->
48
+ <!-- -->
49
+ <!-- CREATED FOR: -->
50
+ <!-- This DTD was created from the JATS DTD Suite. -->
51
+ <!-- Digital archives and publishers may use the -->
52
+ <!-- DTD as is for markup of journal literature or -->
53
+ <!-- related material for archiving and transferring -->
54
+ <!-- such material between archives or create a -->
55
+ <!-- custom XML DTD from the Suite for -->
56
+ <!-- these purposes. -->
57
+ <!-- -->
58
+ <!-- This DTD is in the public domain. An organization -->
59
+ <!-- that wishes to create its own DTD from the suite -->
60
+ <!-- may do so without permission from NLM. -->
61
+ <!-- -->
62
+ <!-- The suite has been set up to be extended using a -->
63
+ <!-- new DTD file and a new DTD-specific customization -->
64
+ <!-- module to redefine the many Parameter Entities. -->
65
+ <!-- Do not modify the suite directly or redistribute -->
66
+ <!-- modified versions of the suite. -->
67
+ <!-- -->
68
+ <!-- In the interest of maintaining consistency and -->
69
+ <!-- clarity for potential users, NLM requests: -->
70
+ <!-- -->
71
+ <!-- 1. If you create a DTD from the JATS DTD Suite -->
72
+ <!-- and intend to stay compatible with the suite, -->
73
+ <!-- then please include the following statement -->
74
+ <!-- as a comment in all of your DTD modules: -->
75
+ <!-- "Created from, and fully compatible with, -->
76
+ <!-- the ANSI/NISO Z39.96 Journal Article Tag -->
77
+ <!-- Suite (JATS)." -->
78
+ <!-- -->
79
+ <!-- 2. If you alter one or more modules of the suite, -->
80
+ <!-- then please rename your version and all its -->
81
+ <!-- modules to avoid any confusion with the -->
82
+ <!-- original suite. Also, please include the -->
83
+ <!-- following statement as a comment in all your -->
84
+ <!-- DTD modules: -->
85
+ <!-- "Based in part on, but not fully compatible -->
86
+ <!-- with, the ANSI/NISO Z39.96 Journal Article -->
87
+ <!-- Tag Suite (JATS)." -->
88
+ <!-- -->
89
+ <!-- ORIGINAL CREATION DATE: -->
90
+ <!-- December 2002 -->
91
+ <!-- -->
92
+ <!-- CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96 -->
93
+ <!-- Working Group. Mulberry Technologies was -->
94
+ <!-- supported by National Center for Biotechnology -->
95
+ <!-- Information (NCBI), a center of the US National -->
96
+ <!-- Library of Medicine (NLM). -->
97
+ <!-- -->
98
+ <!-- The Journal Archiving and Interchange DTD is -->
99
+ <!-- built from the JATS DTD Suite. -->
100
+ <!-- -->
101
+ <!-- Suggestions for refinements and enhancements to -->
102
+ <!-- this DTD should be sent in email to: -->
103
+ <!-- jats@ncbi.nlm.nih.gov -->
104
+ <!-- ============================================================= -->
105
+
106
+
107
+ <!-- ============================================================= -->
108
+ <!-- DTD VERSION/CHANGE HISTORY -->
109
+ <!-- ============================================================= -->
110
+ <!--
111
+ Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
112
+ =============================================================
113
+ BITS Version 2.1 (DAL/BTU) v2.1 (2018-04-01)
114
+ JATS Version 1.2d2 (DAL/BTU) v1.2d2 (2018-04-01)
115
+
116
+ JATS is a continuing maintenance NISO Standard, which
117
+ requires voting by the ANSI and NISO memberships to be changed.
118
+ BITS is under continuous maintenance, and is modified at the
119
+ discretion of the working group.
120
+
121
+ This draft DTD represents an interim version of the
122
+ non-normative JATS DTD Suite, as an indication to JATS users
123
+ the decisions that have been made by the JATS Standing
124
+ Committee. This draft has not yet been given public review
125
+ or voting. The formal public identifiers were changed in the
126
+ modules and the catalogs.
127
+
128
+ 35. NON-MONETARY SUPPORT - Inside <front-stub-mod> added new
129
+ <support-group> to add hold both funding and
130
+ non-monetary support descriptions. <support-group> is
131
+ both a peer to <funding-group> (backward compatibility)
132
+
133
+ 34. DATE-NOT-AVAILABLE - Inside <article-meta> and <front-stub>,
134
+ a new element <pub-date-not-available> was added as an
135
+ alternatives to <pub-date>. The meaning is that a
136
+ publication date was (for whatever reason) not available.
137
+ Presence of the element says nothing about publication
138
+ status.
139
+
140
+ 34. INLINE INDEX TERMS - Added invocation to BITS inline
141
+ (embedded) index term model
142
+
143
+ 33. @dtd-version becomes "1.2d2" from "1.2d1"
144
+
145
+ 32. BITS "2.0" and "v2.0 20151225" became
146
+ BITS "2.1" and "v2.1 20180401".
147
+
148
+ JATS "1.2d1" and "v1.2d1 20171231" became
149
+ JATS "1.2d2" and "v1.2d2 20180401".
150
+
151
+ No module names were changed.
152
+
153
+ =============================================================
154
+ JATS Version 1.2d2 (ANSI/NISO Z39.96-2015)
155
+ (DAL/BTU) v1.2d2 (2017-12-31)
156
+
157
+ NISO JATS is a continuing maintenance NISO Standard, which
158
+ requires voting by the ANSI and NISO memberships to be changed.
159
+
160
+ This draft DTD represents an interim version of the
161
+ non-normative JATS DTD Suite, as an indication to JATS users
162
+ the decisions that have been made by the JATS Standing
163
+ Committee. This draft has not yet been given public review
164
+ or voting. The formal public identifiers were changed in the
165
+ modules and the catalogs.
166
+
167
+ 31. JATS "1.2d1" and "v1.2d1 20170631" became
168
+ JATS "1.2d2" and "v1.2d2 20171231".
169
+
170
+ =============================================================
171
+ JATS Version 1.2d1 (DAL/BTU) v1.2d1 (2017-06-31)
172
+
173
+ NISO JATS is a continuing maintenance NISO Standard, which
174
+ requires voting by the ANSI and NISO memberships to be changed.
175
+
176
+ This draft DTD represents an interim version of the
177
+ non-normative JATS DTD Suite, as an indication to JATS users
178
+ the decisions that have been made by the JATS Standing
179
+ Committee. This draft has not yet been given public review
180
+ or voting. The formal public identifiers were changed in the
181
+ modules and the catalogs.
182
+
183
+ 30. xsi:noNamespaceSchemaLocation added to attribute list of
184
+ <article>. Most modern processors do not need this, but
185
+ a user with an older processor requested it, so the JATS
186
+ Standing Committee acquiesced. This pseudo-attribute
187
+ cannot be used with a DOCTYPE declaration.
188
+
189
+ 29. FRONT STUB MODEL
190
+ - ARTICLE VERSION - Added new element <article-version>
191
+ inside <front-stub> to hold one version number for the
192
+ article. <article-version> element may repeat inside
193
+ <article-version-alternatives>to hold version numbers
194
+ from different systems.
195
+
196
+ - NO DATE - <pub-date> (optional repeatable) is now
197
+ followed by the optional new element
198
+ <pub-date-not-available>.
199
+
200
+ - PUB-HISTORY - <pub-history> (optional) added to hold
201
+ <event>s.
202
+
203
+ 28. @dtd-version becomes "1.2d1" from 1.1
204
+
205
+ 27. JATS became version "1.2d1" and "v1.2d1 20170631"
206
+
207
+ =============================================================
208
+ JATS Version 1.1 (DAL/BTU) v1.1 (2015-12-15)
209
+
210
+ JATS is a continuing maintenance NISO Standard, which
211
+ requires voting by the ANSI and NISO memberships to be changed.
212
+ JATS 1.1 was approved in late 2015, so the formal public
213
+ identifiers were changed in the modules and the catalogs.
214
+ No model or attribute changes were made at this time.
215
+
216
+ 26. JATS became version "1.1" and "v1.1 20151215"
217
+
218
+ =============================================================
219
+ JATS Version 1.1d3 (DAL/BTU) v1.1d3 (2015-03-01)
220
+
221
+ The changes in this release are in response to NISO
222
+ License and Indicators Recommended Practice.
223
+
224
+ NISO JATS is a continuing maintenance NISO Standard, which
225
+ requires voting by the NISO membership to be changed. This
226
+ Committee Draft 1.1d3 will be sent to the NISO voting
227
+ membership, to become (if approved) NISO JATS 1.1.
228
+
229
+ This draft DTD represents an interim version of the
230
+ non-normative JATS DTD Suite, as an indication to JATS users
231
+ the decisions that have been made by the JATS Standing
232
+ Committee.
233
+
234
+ 25. ALI - Added ALI namespace for NISO Access and Indicator
235
+ license reference and free to read elements.
236
+
237
+ 24. JATS became version "1.1d3" and "v1.1d3 20150301"
238
+
239
+ =============================================================
240
+ JATS Version 1.1d2 (DAL/BTU) v1.1d2 (2014-09-30)
241
+
242
+ NISO JATS is a continuing maintenance NISO Standard, which
243
+ requires voting by the NISO membership to be changed. This
244
+ Committee Draft 1.1d2 will be sent to the NISO voting
245
+ membership, to become (if approved) NISO JATS 1.1.
246
+
247
+ This catalog represents an interim version of the
248
+ non-normative JATS DTD Suite, as an indication to JATS users
249
+ the decisions that have been made by the JATS Standing
250
+ Committee.
251
+ ,
252
+ 23. <VOLUME> INSIDE <FRONT-STUB>
253
+ - Allowed <volume> to repeat inside <article-meta>, the types to
254
+ be distinguished using @content-type
255
+ - Added new optional element <volume-issue-group> inside
256
+ <article-meta) following all volume and issue elements
257
+ to hold volume-issue pairs (or n-tuples) when a second
258
+ and subsequent <volume> has its own related issue
259
+ information.
260
+ - Made <issue> repeatable, for those who choose not to use
261
+ the new wrapper element.
262
+
263
+ 20. JATS became version "1.1d2" and "v1.1d2 20140930//EN"
264
+
265
+ =============================================================
266
+ NISO JATS Version 1.1d1 (DAL/BTU) v1.1 (2013-11-15)
267
+
268
+ ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1d1)
269
+
270
+ NISO JATS Standing Committee met and answered the requests and
271
+ suggestions from the NISO request forms.
272
+
273
+ Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,
274
+ XSDs, RNGs and supporting documentation are available at
275
+ http://jats.nlm.nih.gov/1.0/
276
+
277
+ 19. MATHML 3.0 - Created a new version of the Publishing DTD to
278
+ take MathML 3.0 instead of MathML 2.0.
279
+ Nothing else changed from regular Publishing DTD.
280
+ Call to MathML setup module changed and added call to the
281
+ specific MathML 3.0 modules.
282
+
283
+ 18. DTD Version - Updated the DTD-version attribute to "1.1d1" and
284
+ the formal public identifier to the date: "v1.1d1 20130915//EN".
285
+
286
+ 17. GLOBAL ATTRIBUTES - Added the new module for Common (global)
287
+ attributes: %JATS-common-atts.ent;, called in before the
288
+ customizations models module.
289
+
290
+ 16. GLOBAL ATTRIBUTES - Added the new parameter entity
291
+ %jats-common-atts;
292
+ to every element in this module. This PE adds (for now) the
293
+ @id attribute and the @xml:base attribute to every element,
294
+ whether metadata or narrative.
295
+ Since the @id in this parameter entity is optional, a second
296
+ parameter entity jats-common-atts-id-required was also added.
297
+ The two are kept in sync with the jats-base-atts parameter
298
+ entity.
299
+ This added a new attribute list to:
300
+ - back
301
+ - front
302
+ - front-stub
303
+
304
+ 15. ABSTRACTS AND KEYWORDS
305
+ Changed "abstract*" to "(%abstract.class;)*"
306
+ and "kwd-group*" to "(%kwd-group.class;)*" since those
307
+ classes now exist. Elements should have a limited number of
308
+ ways to be invoked.
309
+ - front-stub (through %front-stub-model;)
310
+
311
+ =============================================================
312
+ NISO JATS Version 1.0 (DAL/BTU) v1.0 (2012-xx-xx)
313
+
314
+ ANSI/NISO Z39.96-2012 (Version 1.0)
315
+
316
+ Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,
317
+ XSDs, RNGs and supporting documentation are available at
318
+ http://jats.nlm.nih.gov/1.0/
319
+
320
+ 14. FRONT MODEL - The model for front (%front-model;) in this
321
+ modules did not agree with the front model in the regular
322
+ archiving module. Replaced this model with the one from the
323
+ archiving module.
324
+
325
+ 13. RELATED OBJECT - Added <related-object> everywhere
326
+ <related-article> was used, including inside
327
+ <front-stub> using front-stub-model.
328
+
329
+ 12. OASIS NAMESPACE - Added the OASIS table namespace handling,
330
+ which, by default, places a namespace prefix of "oasis" on
331
+ the OASIS CALS Exchange Table Model.
332
+ - Added call to JATS-oasis-namespace.ent (which sets up
333
+ the OASIS namespace URI and the prefix "oasis")
334
+ - Added %oasis.xmlns.attrib; attribute to <article>
335
+ - Altered the custom classes module to use the new
336
+ namespaced OASIS element names for <table> and <tbody>
337
+ (%otable.qname; and %otbody.qname;)
338
+
339
+ NOTE: The XHTML table material was not removed, so both table
340
+ models still work (using <table> and <oasis:table> respectively.
341
+
342
+ 11. Updated the DTD-version attribute to "1.0" and the formal
343
+ public identifier to the date: "v1.0 20120330//EN".
344
+
345
+ =============================================================
346
+ Version 0.4 (DAL/BTU) v0.4 (2011-01-31)
347
+
348
+ This Tag Set is in the process of becoming a NISO standard.
349
+ The version numbers are starting over from 0.4", as a Trial
350
+ Use Draft, to be made into "Version 1.0" when the Tag Suite
351
+ becomes a NISO standard. Thus, the version number that would
352
+ have been "NLM Version 3.1 Draft" has become NISO JATS
353
+ "Version 0.4".
354
+
355
+ Details on NISO Trial Use Draft Version 0.4 are available at
356
+ http://jats.nlm.nih.gov/JATS-0.4.
357
+
358
+ 10. Updated the DTD-version attribute to "0.4"
359
+
360
+ 9. Updated the public identifier to "v0.4 20110131",
361
+ modified the formal public identifier to include "JATS (Z39.96)",
362
+ and the filename as delivered to include "JATS" and the
363
+ new version number "0". Also included the phrase
364
+ "(OASIS Tables)" in the formal name.
365
+
366
+ Caution: Version 0.4 is fully compatible with Version 3.0, but
367
+ the following change could break some customizations.
368
+
369
+ 8. BODY ATTRIBUTES - Added attribute list and new PE %body-atts;
370
+ to the model of <body>. The only current attribute is
371
+ @specific-use, which indicates, for example, not a real
372
+ tagged XML body, but a 'bag of words" for indexing purposes.
373
+
374
+ 7. I18N - Changed the default for @xml:lang from "en" to
375
+ #IMPLIED, so that the @xml:lang would inherit properly and
376
+ not need to be over-ridden in
377
+ - <sub-article> through %sub-article-atts;
378
+ - <response> through %response-atts;
379
+
380
+ 6. XML:LANG - Added @xml:lang to the following elements:
381
+ Added to facilitate multiple languages.
382
+ - article
383
+
384
+ 5. AFFILIATION ALTERNATIVES - Added the element <aff-alternatives>
385
+ to <front-stub> through %front-stub-model;. This element
386
+ will hold multiple <aff>s that are a representation of a
387
+ single affiliation, for example, the name of an institution
388
+ in two languages or two scripts.
389
+
390
+ =============================================================
391
+ Version 3.0 (DAL/BTU) v3.0 (2007-10-31)
392
+
393
+ Version 3.0 is the first non-backward-compatible release.
394
+ In addition to the usual incremental changes, some
395
+ elements and attributes have been renamed and/or remodeled
396
+ to better meet user needs and to increase tag set consistency.
397
+ All module change histories are available through the Tag Suite
398
+ web site at http://dtd.nlm.nih.gov.
399
+
400
+ Details on version 3.0 are available at
401
+ http://dtd.nlm.nih.gov/3.0.
402
+
403
+ 4. AFFILIATION ALTERNATIVES - Added the element <aff-alternatives>
404
+ to <front-stub> through %front-stub-model;. This element
405
+ will hold multiple <aff>s that are a representation of a
406
+ single affiliation, for example, the name of an institution
407
+ in two languages or two scripts.
408
+
409
+ 3. LANGUAGE CODES - Codes for languages as well as variants,
410
+ transliterations, regions, scripts, and combinations
411
+ such as "Jpan"(Han + Hiragana + Katakana). These values should be
412
+ taken from RFC 5646/W3C/IANA Subtag Registry recommendations
413
+ and can be found online at:
414
+ http://www.iana.org/assignments/language-subtag-registry
415
+
416
+ 2. Changed default @xml:lang from "EN" from "en" to match latest
417
+ RFC 4646/W3C/IANA Subtag Registry recommendations
418
+
419
+ 1. Updated public identifier to "v3.0 20080202//EN" -->
420
+
421
+ <!-- ============================================================= -->
422
+ <!-- Details concerning
423
+ ANSI/NISO Z39.96-2015 JATS-based DTDs, XSDs,
424
+ RNGs and supporting documentation are available at
425
+ http://jats.nlm.nih.gov/1.1/ -->
426
+
427
+
428
+ <!-- ============================================================= -->
429
+ <!-- DESIGN CONSIDERATIONS -->
430
+ <!-- ============================================================= -->
431
+
432
+
433
+ <!-- MODULAR DTD LIBRARY
434
+ A set of journal archiving and interchange
435
+ DTD modules was written as the basis for
436
+ publishing, interchange, and repository
437
+ DTDs, with the intention that DTDs for
438
+ specific purposes, such as this Journal
439
+ Archiving and Interchange DTD, would be
440
+ developed based on them.
441
+
442
+ This archiving DTD has been designed to
443
+ be descriptive, open, and inclusive to
444
+ allow journal articles to be translated into
445
+ this format as conveniently as possible
446
+ from a wide variety of proprietary journal
447
+ article DTDs (such as Blackwell, Keton, and
448
+ Ovid).
449
+
450
+ This Archiving DTD has been developed from
451
+ the JATS DTD Suite modules, in the approved
452
+ manner, making changes to the declarations
453
+ in those modules by over-riding Parameter
454
+ Entity contents by redefining the entities
455
+ in the:
456
+ %archive-oasis-custom-classes.ent;
457
+ %archivecustom-mixes.ent;
458
+ %archivecustom-models.ent;
459
+ modules, which are called from this DTD file.
460
+ No changes to any of the original JATS DTD
461
+ Suite modules are required in order to
462
+ use this DTD. -->
463
+
464
+
465
+ <!-- ============================================================= -->
466
+ <!-- MODULES OF MODULES INVOKED -->
467
+ <!-- ============================================================= -->
468
+
469
+
470
+ <!-- MODULE TO NAME DTD-SPECIFIC MODULES -->
471
+ <!-- Names all DTD-specific external modules -->
472
+ <!ENTITY % archive-oasis-custom-modules.ent
473
+ PUBLIC
474
+ "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD with OASIS Tables DTD-Specific Modules v1.2d2 20180401//EN"
475
+ "JATS-archive-oasis-custom-modules1.ent" >
476
+ %archive-oasis-custom-modules.ent;
477
+
478
+
479
+ <!-- MODULE TO NAME THE MATHML 3.0 MODULES -->
480
+ <!-- Names all DTD-specific external modules -->
481
+ <!ENTITY % mathml3-modules.ent
482
+ PUBLIC
483
+ "-//NLM//DTD JATS (Z39.96) JATS MathML 3.0 Modules v1.2d2 20180401//EN"
484
+ "JATS-mathml3-modules1.ent" >
485
+ %mathml3-modules.ent;
486
+
487
+
488
+
489
+ <!-- MODULE TO NAME THE MODULES -->
490
+ <!-- Declares all the external modules that are
491
+ part of the modular JATS DTD Suite library.
492
+ Thus it does NOT declare itself; the
493
+ DTD-specific module-of-modules; any
494
+ DTD-specific class, mix, or model over-ride
495
+ modules; or any content modules specific to
496
+ this DTD. These modules are declared in the
497
+ DTD-specific module of modules.
498
+ Since this module declares but does not
499
+ invoke modules, this DTD then invokes any
500
+ modules it uses by referencing the external
501
+ Parameter Entities defined in the Module of
502
+ Modules. To include a set of elements (such
503
+ as all the lists or the table elements) this
504
+ module defines the external Parameter Entity
505
+ for the module(s) that contains the table
506
+ declarations and the DTD references that
507
+ entity. -->
508
+ <!ENTITY % modules.ent PUBLIC
509
+ "-//NLM//DTD JATS (Z39.96) JATS DTD Suite Module of Modules v1.2d2 20180401//EN"
510
+ "JATS-modules1.ent" >
511
+ %modules.ent;
512
+
513
+ <!-- ============================================================= -->
514
+ <!-- NISO ALI NAMESPACE SETUP -->
515
+ <!-- ============================================================= -->
516
+
517
+
518
+ <!-- DEFINE ALI NAMESPACE ATTRIBUTE AND PREFIX -->
519
+ <!-- Names the module defines the NISO Access and
520
+ Indicators Exchange Model namespace, prefix,
521
+ and pseudo-attribute @xmlns. -->
522
+ %JATS-ali-namespace.ent;
523
+
524
+ <!-- ============================================================= -->
525
+ <!-- OASIS NAMESPACE SETUP -->
526
+ <!-- ============================================================= -->
527
+
528
+
529
+ <!-- DEFINE OASIS NAMESPACE ATTRIBUTE AND PREFIX-->
530
+ <!-- Names the module defines the OASIS CALS
531
+ Exchange Model namespace, prefix, and
532
+ pseudo-attribute @xmlns and all the
533
+ element qnames for CALS Tables. -->
534
+ %JATS-oasis-namespace.ent;
535
+
536
+
537
+ <!-- ============================================================= -->
538
+ <!-- SET UP COMMON (ALL ELEMENT) ATTRIBUTES -->
539
+ <!-- ============================================================= -->
540
+
541
+
542
+ <!-- COMMON ATTRIBUTES MODULE -->
543
+ <!-- Set up the common attributes, those used on
544
+ nearly all elements.
545
+ Must be called before the custom models
546
+ module. -->
547
+ %JATS-common-atts.ent;
548
+
549
+
550
+ <!-- ============================================================= -->
551
+ <!-- CUSTOMIZATION MODULES INVOKED -->
552
+ <!-- Note: These modules must be called after -->
553
+ <!-- all Module of Modules but before any other -->
554
+ <!-- modules. Unlike any other grouping, order -->
555
+ <!-- of these modules matters. -->
556
+ <!-- ============================================================= -->
557
+
558
+
559
+ <!-- DTD-SPECIFIC CLASS CUSTOMIZATIONS MODULE -->
560
+ <!-- Names the module that holds the DTD-specific
561
+ class definitions for the Journal Archiving
562
+ and Interchange DTD that over-rides the Suite
563
+ defaults.
564
+ (Defined in
565
+ %archive-oasis-custom-modules.ent; ) -->
566
+ %archive-oasis-custom-classes.ent;
567
+
568
+
569
+ <!-- DEFAULT ELEMENT CLASSES MODULE -->
570
+ <!-- Names the module that holds the standard
571
+ class definitions for the JATS DTD Suite. -->
572
+ %default-classes.ent;
573
+
574
+
575
+ <!-- DTD-SPECIFIC MIX CUSTOMIZATIONS MODULE -->
576
+ <!-- Set up the Parameter Entities and element
577
+ class definitions that will be used to
578
+ over-ride some element mixes in this DTD.
579
+ (Defined in
580
+ %archive-oasis-custom-modules.ent; ) -->
581
+ %archivecustom-mixes.ent;
582
+
583
+
584
+ <!-- DEFAULT MIX CUSTOMIZATIONS MODULE -->
585
+ <!-- Names the module that holds the standard
586
+ mix definitions for the JATS DTD Suite. -->
587
+ %default-mixes.ent;
588
+
589
+
590
+ <!-- DTD-SPECIFIC MODELS/ATTRIBUTES CUSTOMIZATIONS
591
+ MODULE -->
592
+ <!-- Names the module that holds the over-rides
593
+ of content models, attribute lists, elements
594
+ lists to be used in content models, and
595
+ attribute values. These are DTD-specific.
596
+ (Defined in
597
+ %archive-oasis-custom-modules.ent; ) -->
598
+ %archivecustom-models.ent;
599
+
600
+
601
+ <!-- ============================================================= -->
602
+ <!-- COMMON (SHARED) ELEMENTS MODULE INVOKED -->
603
+ <!-- ============================================================= -->
604
+
605
+
606
+ <!-- COMMON (SHARED) DECLARATIONS -->
607
+ <!-- Declarations for elements, attributes,
608
+ entities, and Notations that are shared by
609
+ more than one class module. Note: Must be
610
+ called before any of the class modules. -->
611
+
612
+ %common.ent;
613
+
614
+
615
+ <!-- ============================================================= -->
616
+ <!-- JOURNAL ARTICLE CLASS ELEMENTS (alpha) -->
617
+ <!-- ============================================================= -->
618
+
619
+ <!-- ARTICLE METADATA ELEMENTS -->
620
+ %articlemeta.ent;
621
+
622
+
623
+ <!-- BACK MATTER ELEMENTS -->
624
+ %backmatter.ent;
625
+
626
+
627
+ <!-- DISPLAY (GRAPHICAL) ELEMENTS -->
628
+ %display.ent;
629
+
630
+
631
+ <!-- FORMATTING ELEMENT CLASSES -->
632
+ <!-- Elements that change rendition/display. -->
633
+ %format.ent;
634
+
635
+
636
+ <!-- FUNDING ELEMENTS -->
637
+ <!-- Elements that describe the sponsorship or
638
+ open access -->
639
+ %funding.ent;
640
+
641
+
642
+ <!-- JOURNAL METADATA ELEMENTS -->
643
+ %journalmeta.ent;
644
+
645
+
646
+ <!-- LINK CLASS ELEMENTS -->
647
+ %link.ent;
648
+
649
+
650
+ <!-- LIST CLASS ELEMENTS -->
651
+ %list.ent;
652
+
653
+
654
+ <!-- MATH ELEMENTS -->
655
+ %math.ent;
656
+
657
+
658
+ <!-- NLM CITATION ELEMENT -->
659
+ %nlmcitation.ent;
660
+
661
+
662
+ <!-- PARAGRAPH-LEVEL ELEMENTS -->
663
+ %para.ent;
664
+
665
+
666
+ <!-- PHRASE-LEVEL ELEMENTS -->
667
+ %phrase.ent;
668
+
669
+
670
+ <!-- BIBLIOGRAPHIC REFERENCE (CITATION)
671
+ CLASS ELEMENTS -->
672
+ %references.ent;
673
+
674
+
675
+ <!-- RELATED OBJECT ELEMENT -->
676
+ <!-- Defines the <related-object> element to
677
+ describe a related object such as a
678
+ related book or a dataset. -->
679
+ %related-object.ent;
680
+
681
+
682
+ <!-- SECTION ELEMENTS -->
683
+ %section.ent;
684
+
685
+
686
+ <!-- ============================================================= -->
687
+ <!-- THE REST OF THE EXTERNAL MODULES INVOKED -->
688
+ <!-- ============================================================= -->
689
+
690
+
691
+ <!-- BITS EMBEDDED INDEX ELEMENTS MODULE -->
692
+ <!-- Element declarations the index elements
693
+ which are embedded in the article
694
+ narrative. -->
695
+ %index-term.ent;
696
+
697
+
698
+ <!-- ============================================================= -->
699
+ <!-- THE REST OF THE EXTERNAL MODULES INVOKED -->
700
+ <!-- ============================================================= -->
701
+
702
+
703
+ <!-- MATHML SETUP MODULE -->
704
+ <!-- Invoke the MathML modules -->
705
+ %mathml3-mathmlsetup.ent;
706
+
707
+
708
+ <!-- XHTML TABLE SETUP MODULE -->
709
+ <!-- Set up the necessary Parameter Entity values
710
+ and then invoke XHTML (HTML 4.0) table
711
+ module -->
712
+ %XHTMLtablesetup.ent;
713
+
714
+
715
+ <!-- OASIS EXCHANGE (CALS) TABLE SETUP MODULE -->
716
+ <!-- Set up the necessary Parameter Entity values
717
+ and then invokes OASIS Exchange table
718
+ module -->
719
+ %oasis-tablesetup.ent;
720
+
721
+
722
+ <!-- SPECIAL CHARACTERS DECLARATIONS -->
723
+ <!-- Standard XML special character entities
724
+ used in this DTD -->
725
+ %xmlspecchars.ent;
726
+
727
+
728
+ <!-- CUSTOM SPECIAL CHARACTERS DECLARATIONS -->
729
+ <!-- Custom special character entities created
730
+ specifically for use in this DTD Suite -->
731
+ %chars.ent;
732
+
733
+
734
+ <!-- NOTATION DECLARATIONS MODULE -->
735
+ %notat.ent;
736
+
737
+
738
+ <!-- ============================================================= -->
739
+ <!-- PARAMETER ENTITIES FOR ATTRIBUTE LISTS -->
740
+ <!-- ============================================================= -->
741
+
742
+
743
+ <!-- DTD VERSION -->
744
+ <!-- What version of this DTD was used to make
745
+ the document instance under consideration.
746
+ Note that this is a fixed value that should
747
+ change every time the DTD changes versions or
748
+ revisions. -->
749
+ <!ENTITY % dtd-version
750
+ "dtd-version
751
+ CDATA #FIXED '1.2d2'" >
752
+
753
+
754
+ <!-- ARTICLE ATTRIBUTES -->
755
+ <!-- Attributes for the top-level element
756
+ <article> -->
757
+ <!ENTITY % article-atts
758
+ "%jats-common-atts;
759
+ article-type
760
+ CDATA #IMPLIED
761
+ specific-use
762
+ CDATA #IMPLIED
763
+ xml:lang NMTOKEN 'en'
764
+ %dtd-version;
765
+ %XLINK.xmlns.attrib;
766
+ %MATHML.xmlns.attrib;
767
+ %Schema.xmlns.attrib;
768
+ %ali.xmlns.attrib;
769
+ %oasis.xmlns.attrib;
770
+ %Schema.prefix;:noNamespaceSchemaLocation
771
+ CDATA #IMPLIED" >
772
+
773
+
774
+ <!-- BACK ATTRIBUTES -->
775
+ <!-- Attributes for the <back> element -->
776
+ <!ENTITY % back-atts
777
+ "%jats-common-atts;" >
778
+
779
+
780
+ <!-- BODY ATTRIBUTES -->
781
+ <!-- Attributes for the <body> element -->
782
+ <!ENTITY % body-atts
783
+ "%jats-common-atts;
784
+ specific-use
785
+ CDATA #IMPLIED" >
786
+
787
+
788
+ <!-- FRONT ATTRIBUTES -->
789
+ <!-- Attributes for the <front> element -->
790
+ <!ENTITY % front-atts
791
+ "%jats-common-atts;" >
792
+
793
+
794
+ <!-- FRONT STUB ATTRIBUTES -->
795
+ <!-- Attributes for the <front-stub> element -->
796
+ <!ENTITY % front-stub-atts
797
+ "%jats-common-atts;" >
798
+
799
+
800
+ <!-- SUB-ARTICLE ATTRIBUTES -->
801
+ <!-- Attributes for the <sub-article> element -->
802
+ <!ENTITY % sub-article-atts
803
+ "%jats-common-atts;
804
+ article-type
805
+ CDATA #IMPLIED
806
+ specific-use
807
+ CDATA #IMPLIED
808
+ xml:lang NMTOKEN #IMPLIED" >
809
+
810
+
811
+ <!-- RESPONSE ATTRIBUTES -->
812
+ <!-- Attributes for the <response> element -->
813
+ <!ENTITY % response-atts
814
+ "%jats-common-atts;
815
+ response-type
816
+ CDATA #IMPLIED
817
+ specific-use
818
+ CDATA #IMPLIED
819
+ xml:lang NMTOKEN #IMPLIED" >
820
+
821
+
822
+ <!-- ============================================================= -->
823
+ <!-- JOURNAL ARTICLE ELEMENTS -->
824
+ <!-- ============================================================= -->
825
+
826
+
827
+ <!-- ARTICLE MODEL (LIMITED) -->
828
+ <!-- Article-like model used for, for example,
829
+ a short sub-article such as a news brief that
830
+ is contained in side a journal article.
831
+ -->
832
+ <!ENTITY % article-short-model
833
+ "((front | front-stub), body?, back?,
834
+ floats-group?)" >
835
+
836
+
837
+ <!-- ARTICLE MODEL WITH SUB-ARTICLE OR RESPONSE -->
838
+ <!-- Typical journal article model, which may
839
+ contain extended components, such as
840
+ sub-articles or responses, but which usually
841
+ contains neither. -->
842
+ <!ENTITY % article-full-model
843
+ "(front, body?, back?, floats-group?,
844
+ (sub-article* | response*) )" >
845
+
846
+
847
+ <!-- ARTICLE -->
848
+ <!-- The complete content of a journal article.
849
+ Details at:
850
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=article
851
+ -->
852
+ <!ELEMENT article %article-full-model; >
853
+ <!ATTLIST article
854
+ %article-atts; >
855
+
856
+
857
+ <!-- ============================================================= -->
858
+ <!-- FRONT MATTER ELEMENTS -->
859
+ <!-- ============================================================= -->
860
+
861
+
862
+ <!-- FRONT MATTER MODEL -->
863
+ <!-- Model for the <front> matter (the header
864
+ metadata) of a journal article) -->
865
+ <!ENTITY % front-model "(journal-meta?, article-meta,
866
+ (%list.class; | %front.class; |
867
+ %front-back.class;)* )" >
868
+
869
+
870
+ <!-- FRONT MATTER -->
871
+ <!-- The metadata concerning an article, such as
872
+ the name and issue of the journal in which it
873
+ appears and the name and author(s) of the
874
+ article.
875
+ Details at:
876
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=front
877
+ -->
878
+ <!ELEMENT front %front-model; >
879
+ <!ATTLIST front
880
+ %front-atts; >
881
+
882
+
883
+ <!-- ============================================================= -->
884
+ <!-- BODY ELEMENTS -->
885
+ <!-- ============================================================= -->
886
+
887
+
888
+ <!-- BODY MODEL -->
889
+ <!-- Content model for the Body (main textual
890
+ content) of a journal article. -->
891
+ <!ENTITY % body-model "((%para-level;)*, (%sec-level;)*,
892
+ sig-block?)" >
893
+
894
+
895
+ <!-- BODY OF THE ARTICLE -->
896
+ <!-- The main textual portion of the article that
897
+ conveys the content.
898
+ Details at:
899
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=body
900
+ -->
901
+ <!ELEMENT body %body-model; >
902
+ <!ATTLIST body
903
+ %body-atts; >
904
+
905
+
906
+ <!-- ============================================================= -->
907
+ <!-- BACK MATTER ELEMENTS -->
908
+ <!-- ============================================================= -->
909
+
910
+
911
+ <!-- BACK MATTER MODEL -->
912
+ <!-- Content model for the Back Matter (ancillary
913
+ material such as appendices) of a journal
914
+ article. -->
915
+ <!ENTITY % back-model "(label?, title*,
916
+ (%doc-back-matter-mix;)* )" >
917
+
918
+
919
+ <!-- BACK MATTER -->
920
+ <!-- Ancillary or supporting material not included
921
+ as part of the main textual content of a
922
+ journal article, for example appendices and
923
+ acknowledgments.
924
+ Details at:
925
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=back
926
+ -->
927
+ <!ELEMENT back %back-model; >
928
+ <!ATTLIST back
929
+ %back-atts; >
930
+
931
+
932
+ <!-- ============================================================= -->
933
+ <!-- SUB-ARTICLE -->
934
+ <!-- ============================================================= -->
935
+
936
+
937
+ <!-- SUB-ARTICLE MODEL -->
938
+ <!-- Content model for the <sub-article> element
939
+ -->
940
+ <!ENTITY % sub-article-model
941
+ "( (front | front-stub), body?, back?,
942
+ floats-group?,
943
+ (sub-article* | response*) )" >
944
+
945
+
946
+ <!-- SUB-ARTICLE -->
947
+ <!-- An article that is completely contained
948
+ inside another article. Both the article and
949
+ the sub-article have their own metadata. The
950
+ article has at very least journal and issue
951
+ information and start and end pages; it may
952
+ have a title, author, or other metadata.
953
+ Details at:
954
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=sub-article
955
+ -->
956
+ <!ELEMENT sub-article %sub-article-model; >
957
+ <!ATTLIST sub-article
958
+ %sub-article-atts; >
959
+
960
+
961
+ <!-- FRONT MODEL STUB -->
962
+ <!-- Content model for the <front-stub> element
963
+ -->
964
+ <!ENTITY % front-stub-model
965
+ "(article-id*, (%article-version.class;)?,
966
+ article-categories?,
967
+ title-group?,
968
+ (%contrib-group.class; |
969
+ %aff-alternatives.class; | %x.class;)*,
970
+ author-notes?, ( (%pub-date.class;)* |
971
+ pub-date-not-available?),
972
+ volume*, volume-id*, volume-series?,
973
+ issue*, issue-id*, issue-title*,
974
+ issue-sponsor*, issue-part?,
975
+ volume-issue-group*, isbn*,
976
+ supplement?,
977
+ ( ( (fpage, lpage?)?, page-range?) |
978
+ elocation-id )?,
979
+ (%address-link.class; | product |
980
+ supplementary-material)*,
981
+ history?, pub-history?, permissions?,
982
+ self-uri*, (%related-article.class;)*,
983
+ (%abstract.class;)*,
984
+ trans-abstract*, (%kwd-group.class;)*,
985
+ funding-group*, support-group*,
986
+ conference*, counts?,
987
+ custom-meta-group?)" >
988
+
989
+
990
+ <!-- STUB FRONT METADATA -->
991
+ <!-- A reduced metadata set for use in
992
+ sub-articles and responses, which will
993
+ inherit metadata not defined in the stub
994
+ from the enclosing article
995
+ Details at:
996
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=front-stub
997
+ -->
998
+ <!ELEMENT front-stub %front-stub-model; >
999
+ <!ATTLIST front-stub
1000
+ %front-stub-atts; >
1001
+
1002
+
1003
+ <!-- ============================================================= -->
1004
+ <!-- RESPONSE ELEMENTS -->
1005
+ <!-- ============================================================= -->
1006
+
1007
+
1008
+ <!-- RESPONSE -->
1009
+ <!-- Reply, response, or commentary concerning the
1010
+ journal article. In the typical case, the
1011
+ response is included in the same XML package
1012
+ as the original article, and thus attached
1013
+ at the end of the article proper.
1014
+ Details at:
1015
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=response
1016
+ -->
1017
+ <!ELEMENT response %article-short-model; >
1018
+ <!ATTLIST response
1019
+ %response-atts; >
1020
+
1021
+
1022
+ <!-- ================== End Journal Archiving and Interchange DTD -->