gphys 1.1.1a
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- data/ChangeLog +1777 -0
- data/LICENSE.txt +34 -0
- data/README +33 -0
- data/Rakefile +57 -0
- data/TODO_ep_flux +6 -0
- data/bin/gdir_client +27 -0
- data/bin/gdir_server +129 -0
- data/bin/gpaop +146 -0
- data/bin/gpcat +148 -0
- data/bin/gpcut +102 -0
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- data/bin/gpmath +120 -0
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- data/lib/numru/derivative.rb +348 -0
- data/lib/numru/ganalysis/covariance.rb +154 -0
- data/lib/numru/ganalysis/eof.rb +298 -0
- data/lib/numru/ganalysis/histogram.rb +252 -0
- data/lib/numru/ganalysis/met.rb +317 -0
- data/lib/numru/ganalysis/planet.rb +182 -0
- data/lib/numru/ganalysis.rb +7 -0
- data/lib/numru/gdir.rb +1038 -0
- data/lib/numru/gdir_connect_ftp-like.rb +149 -0
- data/lib/numru/ggraph.rb +5838 -0
- data/lib/numru/ggraph_on_merdional_section.rb +178 -0
- data/lib/numru/gphys/assoccoords.rb +359 -0
- data/lib/numru/gphys/attribute.rb +129 -0
- data/lib/numru/gphys/attributenetcdf.rb +80 -0
- data/lib/numru/gphys/axis.rb +963 -0
- data/lib/numru/gphys/coordmapping.rb +286 -0
- data/lib/numru/gphys/coordtransform.rb +209 -0
- data/lib/numru/gphys/derivative.rb +314 -0
- data/lib/numru/gphys/ep_flux.rb +868 -0
- data/lib/numru/gphys/gpcommon.rb +52 -0
- data/lib/numru/gphys/gphys.rb +1207 -0
- data/lib/numru/gphys/gphys_fft.rb +886 -0
- data/lib/numru/gphys/gphys_grads_io.rb +212 -0
- data/lib/numru/gphys/gphys_grib_io.rb +214 -0
- data/lib/numru/gphys/gphys_gtool3_io.rb +162 -0
- data/lib/numru/gphys/gphys_hdfeos5_io.rb +672 -0
- data/lib/numru/gphys/gphys_io.rb +452 -0
- data/lib/numru/gphys/gphys_io_common.rb +126 -0
- data/lib/numru/gphys/gphys_netcdf_io.rb +800 -0
- data/lib/numru/gphys/gphys_nusdas_io.rb +132 -0
- data/lib/numru/gphys/grads_gridded.rb +1638 -0
- data/lib/numru/gphys/grib.rb +2049 -0
- data/lib/numru/gphys/grib_params.rb +1465 -0
- data/lib/numru/gphys/grid.rb +723 -0
- data/lib/numru/gphys/gtool3.rb +771 -0
- data/lib/numru/gphys/interpolate.rb +854 -0
- data/lib/numru/gphys/narray_ext.rb +34 -0
- data/lib/numru/gphys/netcdf_convention.rb +406 -0
- data/lib/numru/gphys/subsetmapping.rb +332 -0
- data/lib/numru/gphys/unumeric.rb +522 -0
- data/lib/numru/gphys/varray.rb +1109 -0
- data/lib/numru/gphys/varraycomposite.rb +415 -0
- data/lib/numru/gphys/varraygrads.rb +225 -0
- data/lib/numru/gphys/varraygrib.rb +177 -0
- data/lib/numru/gphys/varraygtool3.rb +226 -0
- data/lib/numru/gphys/varrayhdfeos5.rb +451 -0
- data/lib/numru/gphys/varraynetcdf.rb +350 -0
- data/lib/numru/gphys/varraynusdas.rb +59 -0
- data/lib/numru/gphys.rb +9 -0
- data/lib/numru/htdir.rb +170 -0
- data/multibitIO.c +567 -0
- data/sample/cira86_to_nc.rb +122 -0
- data/sample/druby_cli1.rb +21 -0
- data/sample/druby_cli2.rb +34 -0
- data/sample/druby_serv1.rb +30 -0
- data/sample/druby_serv2.rb +64 -0
- data/sample/ep_flux/demo_NCEP_1.rb +48 -0
- data/sample/ep_flux/demo_NCEP_2.rb +57 -0
- data/sample/ep_flux/demo_NCEP_3.rb +81 -0
- data/sample/ggraph_latlon_labelling_dr002690.rb +159 -0
- data/sample/ggraph_mapfit-axes_dr002687.rb +131 -0
- data/sample/map_projection.rb +121 -0
- data/sample/ncep_theta_coord.rb +79 -0
- data/test/eof_slp.rb +28 -0
- data/test/mltbit.dat +0 -0
- data/test/test_ep_flux.rb +533 -0
- data/test/test_multibitIO.rb +19 -0
- data/testdata/T.jan.ctl +12 -0
- data/testdata/T.jan.dat +0 -0
- data/testdata/T.jan.grib +0 -0
- data/testdata/T.jan.nc +0 -0
- data/testdata/T.jan.packed.withmiss.nc +0 -0
- data/testdata/UV.jan.nc +0 -0
- data/testdata/assoc_crds.nc +0 -0
- data/testdata/cira86.dat +1332 -0
- metadata +621 -0
data/doc/gpview.html
ADDED
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<?xml version="1.0" ?>
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<!DOCTYPE html
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PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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<html xmlns="http://www.w3.org/1999/xhtml">
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<head>
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<title>../bin/gpview</title>
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</head>
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<body>
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<h1><a name="label-0" id="label-0">NAME</a></h1><!-- RDLabel: "NAME" -->
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<p>gpview - quick viewer for the values of a variable specified by a gtool4-type URL. </p>
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<ol>
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<li>for 1-dimensional variable, make line plot.</li>
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<li>for 2-dimensional variable, make contour/tone plot.</li>
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<li>for 3/more-dimensional variable, make contour/tone plot,
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select first 2D. possible to make animation.</li>
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</ol>
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<h1><a name="label-1" id="label-1">USAGE</a></h1><!-- RDLabel: "USAGE" -->
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<p>The first command form is </p>
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<pre>% gpview [options] gturl1 gturl2 gturl3 ...</pre>
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<p>where the format of the gturl is</p>
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<pre>path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]</pre>
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<p>The second commnad form is </p>
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<pre>% gpview --var url [options] gtfile1 gtfile2 ...</pre>
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<p>where the format of the url is </p>
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<pre>varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]</pre>
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<h1><a name="label-2" id="label-2">OPTIONS</a></h1><!-- RDLabel: "OPTIONS" -->
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<p>if you want to know more description, please read</p>
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<pre>http://ruby.gfd-dennou.org/products/gphys/doc/gpview.html</pre>
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<h2><a name="label-3" id="label-3">GLOBAL OPTIONS</a></h2><!-- RDLabel: "GLOBAL OPTIONS" -->
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<dl>
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<dt><h4><a name="label-4" id="label-4">--help:</a></h4></dt><!-- RDLabel: "­­help:" -->
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<dd>
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print this message.
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</dd>
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<dt><h4><a name="label-5" id="label-5">--var url:</a></h4></dt><!-- RDLabel: "­­var url:" -->
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<dd>
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set the variable name and slicing parameters.
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</dd>
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<dt><h4><a name="label-6" id="label-6">--wsn [1-4]:</a></h4></dt><!-- RDLabel: "­­wsn [1-4]:" -->
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<dd>
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set work staion number. each number represent output device:
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1 : X window.
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2 : PS file. (named dcl.ps)
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3 : Tcl/Tk file.
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4 : GTK Windows (depend on dcl-5.3)
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</dd>
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<dt><h4><a name="label-7" id="label-7">--clrmap [1-]:</a></h4></dt><!-- RDLabel: "­­clrmap [1-]:" -->
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49
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<dd>
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50
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set colormap to draw tone/contour.
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</dd>
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<dt><h4><a name="label-8" id="label-8">--itr [1-4,5-7,10-15,20-23,30-33]:</a></h4></dt><!-- RDLabel: "­­itr [1-4,5-7,10-15,20-23,30-33]:" -->
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<dd>
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set axis scale. default is 1.
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1 : linear scale for x/y axis
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2 : linear scale for x , log scale for y axis
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3 : log scale for x , linear scale for y axis
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4 : log scale for x/y axis
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</dd>
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<dt><h4><a name="label-9" id="label-9">--similar [simfac,vxoff,vyoff]:</a></h4></dt><!-- RDLabel: "­­similar [simfac,vxoff,vyoff]:" -->
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<dd>
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(for 5<=itr<=7) set similarity parameters which are fed in DCL.grssim.
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</dd>
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<dt><h4><a name="label-10" id="label-10">--map_axis [uxc,uyc,rot]:</a></h4></dt><!-- RDLabel: "­­map_axis [uxc,uyc,rot]:" -->
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<dd>
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(for 10<=itr<=33) set mapping parameters which are fed in DCL.umpcnt.
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</dd>
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<dt><h4><a name="label-11" id="label-11">--title:</a></h4></dt><!-- RDLabel: "­­title:" -->
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<dd>
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70
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set title of figure
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</dd>
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<dt><h4><a name="label-12" id="label-12">--aspect <aspect>:</a></h4></dt><!-- RDLabel: "­­aspect <aspect>:" -->
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<dd>
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set aspect ratio of Viewport. default is 2.0.
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</dd>
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<dt><h4><a name="label-13" id="label-13">--noannotate:</a></h4></dt><!-- RDLabel: "­­noannotate:" -->
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<dd>
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not draw annotations.
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</dd>
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<dt><h4><a name="label-14" id="label-14">--animate/anim <dim>:</a></h4></dt><!-- RDLabel: "­­animate/anim <dim>:" -->
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81
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<dd>
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82
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plot animation along <dim>. <dim> must be name of dimension.
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</dd>
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<dt><h4><a name="label-15" id="label-15">--alternate, --Ga:</a></h4></dt><!-- RDLabel: "­­alternate, ­­Ga:" -->
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85
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<dd>
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86
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enable to backing store.
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87
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</dd>
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<dt><h4><a name="label-16" id="label-16">--nowait, --Gw:</a></h4></dt><!-- RDLabel: "­­nowait, ­­Gw:" -->
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89
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<dd>
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90
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not wait for any actions if animate
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</dd>
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92
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<dt><h4><a name="label-17" id="label-17">--reverse, --Gr:</a></h4></dt><!-- RDLabel: "­­reverse, ­­Gr:" -->
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93
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<dd>
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94
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plot animation reversible if animate
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95
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</dd>
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96
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<dt><h4><a name="label-18" id="label-18">--smooth, --Gaw:</a></h4></dt><!-- RDLabel: "­­smooth, ­­Gaw:" -->
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97
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<dd>
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98
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equal to --anlternate && --nowait
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</dd>
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100
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<dt><h4><a name="label-19" id="label-19">--exch:</a></h4></dt><!-- RDLabel: "­­exch:" -->
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101
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<dd>
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102
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exchange(transpose) x/y axis.
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103
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</dd>
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104
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<dt><h4><a name="label-20" id="label-20">--mean <dim>:</a></h4></dt><!-- RDLabel: "­­mean <dim>:" -->
|
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105
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+
<dd>
|
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106
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mean along axis <dim>.
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107
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</dd>
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108
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<dt><h4><a name="label-21" id="label-21">--m, --map <map_type>:</a></h4></dt><!-- RDLabel: "­­m, ­­map <map_type>:" -->
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109
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<dd>
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110
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plot map. itr number must be set. this option is neglect if itr
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111
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number is 1-4. abailable map type is coast_world, border_world,
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112
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plate_world, state_usa, coast_japan, pref_japan
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</dd>
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<dt><h4><a name="label-22" id="label-22">--operation <math_func>:</a></h4></dt><!-- RDLabel: "­­operation <math_func>:" -->
|
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115
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<dd>
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116
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operation of the specified math function on the data.
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117
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<math_func> should be a math function with one argument
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118
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such as log10, sqrt, sin, etc.
|
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119
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</dd>
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120
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</dl>
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121
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+
<h2><a name="label-23" id="label-23">LINE/MARK OPTIONS</a></h2><!-- RDLabel: "LINE/MARK OPTIONS" -->
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122
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<dl>
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123
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+
<dt><h4><a name="label-24" id="label-24">--line:</a></h4></dt><!-- RDLabel: "­­line:" -->
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124
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<dd>
|
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125
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+
make line plot forced. (about first 1D)
|
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126
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</dd>
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127
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<dt><h4><a name="label-25" id="label-25">--mark:</a></h4></dt><!-- RDLabel: "­­mark:" -->
|
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128
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+
<dd>
|
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129
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+
make mark plot forced. (about first 1D)
|
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130
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</dd>
|
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131
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+
<dt><h4><a name="label-26" id="label-26">--index:</a></h4></dt><!-- RDLabel: "­­index:" -->
|
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132
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+
<dd>
|
|
133
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+
set DCL line index, which set the color/thickness of the line
|
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134
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+
primitive. please see DCL documents.
|
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135
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</dd>
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136
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+
<dt><h4><a name="label-27" id="label-27">--type:</a></h4></dt><!-- RDLabel: "­­type:" -->
|
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137
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<dd>
|
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138
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set line type.
|
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139
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+
</dd>
|
|
140
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+
<dt><h4><a name="label-28" id="label-28">--range [min:max]</a></h4></dt><!-- RDLabel: "­­range [min:max]" -->
|
|
141
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+
<dd>
|
|
142
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+
set min/max value for line plot. min or max must be set.
|
|
143
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+
</dd>
|
|
144
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+
<dt><h4><a name="label-29" id="label-29">--overplot</a></h4></dt><!-- RDLabel: "­­overplot" -->
|
|
145
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+
<dd>
|
|
146
|
+
set number of lines on each figure
|
|
147
|
+
</dd>
|
|
148
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+
</dl>
|
|
149
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+
<h2><a name="label-30" id="label-30">CONTOUR/TONE OPTIONS</a></h2><!-- RDLabel: "CONTOUR/TONE OPTIONS" -->
|
|
150
|
+
<dl>
|
|
151
|
+
<dt><h4><a name="label-31" id="label-31">--shade:</a></h4></dt><!-- RDLabel: "­­shade:" -->
|
|
152
|
+
<dd>
|
|
153
|
+
make contour and tone plot.
|
|
154
|
+
</dd>
|
|
155
|
+
<dt><h4><a name="label-32" id="label-32">--noshade:</a></h4></dt><!-- RDLabel: "­­noshade:" -->
|
|
156
|
+
<dd>
|
|
157
|
+
make contour plot, without tone.
|
|
158
|
+
</dd>
|
|
159
|
+
<dt><h4><a name="label-33" id="label-33">--nocont:</a></h4></dt><!-- RDLabel: "­­nocont:" -->
|
|
160
|
+
<dd>
|
|
161
|
+
make tone plot, without contour.
|
|
162
|
+
</dd>
|
|
163
|
+
<dt><h4><a name="label-34" id="label-34">--range [min:max]:</a></h4></dt><!-- RDLabel: "­­range [min:max]:" -->
|
|
164
|
+
<dd>
|
|
165
|
+
set min/max value for contour/tone plot. min or max must be set.
|
|
166
|
+
</dd>
|
|
167
|
+
<dt><h4><a name="label-35" id="label-35">--crange:</a></h4></dt><!-- RDLabel: "­­crange:" -->
|
|
168
|
+
<dd>
|
|
169
|
+
set min/max value for contour plot. this is more dominant than --range
|
|
170
|
+
</dd>
|
|
171
|
+
<dt><h4><a name="label-36" id="label-36">--srange:</a></h4></dt><!-- RDLabel: "­­srange:" -->
|
|
172
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+
<dd>
|
|
173
|
+
set min/max value for tone plot. this is more dominant than --interval/int
|
|
174
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+
</dd>
|
|
175
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+
<dt><h4><a name="label-37" id="label-37">--interval,--int [num]:</a></h4></dt><!-- RDLabel: "­­interval,­­int [num]:" -->
|
|
176
|
+
<dd>
|
|
177
|
+
set interval value for contour/tone plot. set the number of lines if
|
|
178
|
+
you set negative value.
|
|
179
|
+
</dd>
|
|
180
|
+
<dt><h4><a name="label-38" id="label-38">--cint:</a></h4></dt><!-- RDLabel: "­­cint:" -->
|
|
181
|
+
<dd>
|
|
182
|
+
set interval value for contour plot. this is more dominant
|
|
183
|
+
than --interval/int
|
|
184
|
+
</dd>
|
|
185
|
+
<dt><h4><a name="label-39" id="label-39">--sint:</a></h4></dt><!-- RDLabel: "­­sint:" -->
|
|
186
|
+
<dd>
|
|
187
|
+
set interval value for tone plot. this is more dominant than --interval/int.
|
|
188
|
+
</dd>
|
|
189
|
+
<dt><h4><a name="label-40" id="label-40">--levels:</a></h4></dt><!-- RDLabel: "­­levels:" -->
|
|
190
|
+
<dd>
|
|
191
|
+
set values of contour/tone levels.
|
|
192
|
+
</dd>
|
|
193
|
+
<dt><h4><a name="label-41" id="label-41">--clevels:</a></h4></dt><!-- RDLabel: "­­clevels:" -->
|
|
194
|
+
<dd>
|
|
195
|
+
set values of contour levels.
|
|
196
|
+
</dd>
|
|
197
|
+
<dt><h4><a name="label-42" id="label-42">--slevels:</a></h4></dt><!-- RDLabel: "­­slevels:" -->
|
|
198
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<dd>
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set tone of contour levels.
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</dd>
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<dt><h4><a name="label-43" id="label-43">--patterns:</a></h4></dt><!-- RDLabel: "­­patterns:" -->
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<dd>
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set each patterns for tone plot.
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</dd>
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<dt><h4><a name="label-44" id="label-44">--nocolorbar:</a></h4></dt><!-- RDLabel: "­­nocolorbar:" -->
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<dd>
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do not draw color bar
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</dd>
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<dt><h4><a name="label-45" id="label-45">--nozero:</a></h4></dt><!-- RDLabel: "­­nozero:" -->
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<dd>
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do not draw zero contour
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</dd>
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</dl>
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<h2><a name="label-46" id="label-46">EXAMPLES</a></h2><!-- RDLabel: "EXAMPLES" -->
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<p>For a single GPhys variable, </p>
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<pre>% gpview data.nc@temp
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% gpview --nocont data.nc@temp,lon=130:150,lat=0
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% gpview --noshade data.nc@temp,lon=130:150,lat=0
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% gpview --mean lon data.nc@temp,lon=130:150,lat=0
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% gpview --exch data.nc@temp,lon=130:150,lat=0
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% gpview --animate lon data.nc@temp,lon=130:150
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% gpview --animate lon --alternate data.nc@temp
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% gpview --smooth lon data.nc@temp,lon=130:150
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% gpview --levels 0,10,20,30 --pattern 30999,40999,50999,60999,70999 data.nc@temp
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% gpview --overplot=3 --anim t data.nc@temp,lon=0
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% gpview --mark data.nc@temp,lon=0,lat=0
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% gpview --operation log10 data.nc@temp,lon=0</pre>
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<p>For multiple GPhys variables, </p>
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<pre>% gpview data1.nc@temp data2.nc@temp
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% gpview data1.nc@temp,lon=130:150 data2.nc@temp,lon=150:170
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% gpview --overplot=3 --anim t data.nc@temp,lon=0 data.nc@temp,lon=10
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% gpview --var temp,lon=130:150 data?.nc
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% gpview --anim t --var temp,lon=130:150 data*.nc </pre>
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<h2><a name="label-47" id="label-47">HISTORY</a></h2><!-- RDLabel: "HISTORY" -->
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<pre>2004/12/14 D Tsukahara && T Horinouti(parse_gturl)
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2005/01/08 D Tsukahara (add option --exch and able to invalid value)
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2005/01/09 D Tsukahara (add option --animate, smooth, alternate, index )
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2005/01/10 D Tsukahara (transpose axis with attr "positive:down" ,
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abailable loopsense_flag. )
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2005/01/10 D Tsukahara (implement GGraph::color_bar, and margin_info,
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which file name, date, and toolname. )
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2005/01/11 D Tsukahara ( 1. write document about OPTIONS.
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2. add many options. more info please see document. )
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|
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2005/01/23 S Takehiro (add option --similar, map_axis)
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|
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2005/02/09 D Tsukahara && M Nakano (add option --reverse, --Gr, --map)
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2005/02/10 D Tsukahara (change option parser (getopts => getoptlong))
|
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|
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2005/02/24 D Tsukahara (apply --range for line plot)
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249
|
+
2005/06/15 S Takehiro (add option --levels, --clevels, --slevels, --patterns)
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|
+
2005/06/17 S Takehiro (missing_value attribute setting removed)
|
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|
+
2005/06/22 S Takehiro (debug, clipping control added to GGraph::annotate)
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2005/06/23 S Takehiro (debug, option --title implemented)
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2005/07/15 S Takehiro (option --noannotate implemented)
|
|
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|
+
2005/08/07 S Takehiro (option --overplot implemented)
|
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2005/08/09 S Takehiro && T Horinouchi (add option --help and help function.
|
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|
+
URL information corrected. )
|
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257
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+
2005/08/23 S Takehiro (multiple Gphys variables plotting
|
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and option --var implemented)
|
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|
+
2005/08/23 S Takehiro (common methods to gp* command moved to gpcommon.rb)
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2005/10/30 S Takehiro (option --animate recoverd)
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2005/10/31 S Takehiro (option --smooth bug fixed)
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|
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2006/03/07 M Nakano (option --int bug fixed)
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2007/10/03 S Takehiro (option --nocolorbar implemented)
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+
2008/04/03 S Takehiro (option --nozero implemented)
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2008/12/14 S Takehiro (option --mark implemented)
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266
|
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2010/03/10 Y SASAKI (change help block into RD format)
|
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|
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2011/01/14 T Tanigawa && S Takehiro (option --operation implemented)</pre>
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+
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</body>
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</html>
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<?xml version="1.0" ?>
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<!DOCTYPE html
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PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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<html xmlns="http://www.w3.org/1999/xhtml">
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<head>
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<title>../bin/grads2nc_with_gphys</title>
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</head>
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|
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<body>
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|
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<h1><a name="label-0" id="label-0">NAME</a></h1><!-- RDLabel: "NAME" -->
|
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|
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<p>grads2nc_with_gphys - GrADS to NetCDF converter</p>
|
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|
+
<h1><a name="label-1" id="label-1">WARNING</a></h1><!-- RDLabel: "WARNING" -->
|
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|
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<p>Not efficient if the GrADS file has many variables.</p>
|
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|
+
<h1><a name="label-2" id="label-2">USAGE</a></h1><!-- RDLabel: "USAGE" -->
|
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|
+
<pre>% grads2nc_with_gphys infilename outfilename [-v varname1 [varname2 ...]]</pre>
|
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|
+
<h1><a name="label-3" id="label-3">EXAMPLE</a></h1><!-- RDLabel: "EXAMPLE" -->
|
|
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|
+
<pre>% grads2nc_with_gphys ../testdata/T.jan.ctl tmp.nc
|
|
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|
+
% grads2nc_with_gphys ../testdata/T.jan.ctl tmp.nc -v T</pre>
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<?xml version="1.0" ?>
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<!DOCTYPE html
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PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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<html xmlns="http://www.w3.org/1999/xhtml">
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|
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<head>
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|
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<title>../lib/numru/gphys/grads_gridded.rb</title>
|
|
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|
+
</head>
|
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9
|
+
<body>
|
|
10
|
+
<h1><a name="label-0" id="label-0">NumRu::GrADS_Gridded -- a class for GrADS gridded datasets</a></h1><!-- RDLabel: "NumRu::GrADS_Gridded ­­ a class for GrADS gridded datasets" -->
|
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11
|
+
<p>by T Horinouchi and R Mizuta</p>
|
|
12
|
+
<h2><a name="label-1" id="label-1">Overview</a></h2><!-- RDLabel: "Overview" -->
|
|
13
|
+
<p>a GrADS_Gridded object corresponds to a GrADS control file,
|
|
14
|
+
through which the users can also access its binary data file(s).</p>
|
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15
|
+
<h2><a name="label-2" id="label-2">Current Limitations</a></h2><!-- RDLabel: "Current Limitations" -->
|
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|
+
<ul>
|
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17
|
+
<li>option 365_day_calendar is not interpreted</li>
|
|
18
|
+
<li>Partial support of the "template" option
|
|
19
|
+
(only %y2,%y4,%m1,%m2,%d1,%d2,%h1,%h2,%n2)
|
|
20
|
+
(Time is assumed to be increasing monotonically).</li>
|
|
21
|
+
</ul>
|
|
22
|
+
<h2><a name="label-3" id="label-3">Class Methods</a></h2><!-- RDLabel: "Class Methods" -->
|
|
23
|
+
<dl>
|
|
24
|
+
<dt><h4><a name="label-4" id="label-4"><code>GrADS_Gridded.new(<var>ctlfilename</var>, <var>mode</var>="<var>r</var>")</code></a></h4></dt><!-- RDLabel: "GrADS_Gridded.new" -->
|
|
25
|
+
<dd>
|
|
26
|
+
same as GrADS_Gridded.open</dd>
|
|
27
|
+
<dt><h4><a name="label-5" id="label-5"><code>GrADS_Gridded.open(<var>ctlfilename</var>, <var>mode</var>="<var>r</var>")</code></a></h4></dt><!-- RDLabel: "GrADS_Gridded.open" -->
|
|
28
|
+
<dd>
|
|
29
|
+
<p>make a new GrADS_Gridded object. </p>
|
|
30
|
+
<p>ARGUMENTS</p>
|
|
31
|
+
<ul>
|
|
32
|
+
<li>ctlfilename (String): name of the control file to open</li>
|
|
33
|
+
<li>mode (String): IO mode. "r" (read only) or "w" (write only).</li>
|
|
34
|
+
</ul>
|
|
35
|
+
<p>REMARK</p>
|
|
36
|
+
<ul>
|
|
37
|
+
<li>You can modify the object through instance methods even if mode=="r".
|
|
38
|
+
In that case, the modification will not be written in the original
|
|
39
|
+
control file.</li>
|
|
40
|
+
</ul></dd>
|
|
41
|
+
<dt><h4><a name="label-6" id="label-6"><code>GrADS_Gridded.create(<var>ctlfilename</var>, <var>noclobber</var>=<var>false</var>, <var>share</var>=<var>false</var>)</code></a></h4></dt><!-- RDLabel: "GrADS_Gridded.create" -->
|
|
42
|
+
<dd>
|
|
43
|
+
<p>make a new GrADS_Gridded object with creating a new control file</p>
|
|
44
|
+
<p>REMARK</p>
|
|
45
|
+
<ul>
|
|
46
|
+
<li>It is used with writing methods, but currently writing methods
|
|
47
|
+
does not work. </li>
|
|
48
|
+
</ul></dd>
|
|
49
|
+
</dl>
|
|
50
|
+
<h2><a name="label-7" id="label-7">Methods</a></h2><!-- RDLabel: "Methods" -->
|
|
51
|
+
<dl>
|
|
52
|
+
<dt><h4><a name="label-8" id="label-8"><code>ndims</code></a></h4></dt><!-- RDLabel: "ndims" -->
|
|
53
|
+
<dd>
|
|
54
|
+
returns the number of dimensions in the file (always 4). </dd>
|
|
55
|
+
<dt><h4><a name="label-9" id="label-9"><code>nvars</code></a></h4></dt><!-- RDLabel: "nvars" -->
|
|
56
|
+
<dd>
|
|
57
|
+
returns the number of variables in the file. </dd>
|
|
58
|
+
<dt><h4><a name="label-10" id="label-10"><code>natts</code></a></h4></dt><!-- RDLabel: "natts" -->
|
|
59
|
+
<dd>
|
|
60
|
+
returns the number of attributes of the variable.</dd>
|
|
61
|
+
<dt><h4><a name="label-11" id="label-11"><code>path</code></a></h4></dt><!-- RDLabel: "path" -->
|
|
62
|
+
<dd>
|
|
63
|
+
returns the path of the control file.</dd>
|
|
64
|
+
<dt><h4><a name="label-12" id="label-12"><code>put_att( <var>attname</var>, <var>value</var> )</code></a></h4></dt><!-- RDLabel: "put_att" -->
|
|
65
|
+
<dd>
|
|
66
|
+
<p>set global attribute</p>
|
|
67
|
+
<p>ARGUMENTS</p>
|
|
68
|
+
<ul>
|
|
69
|
+
<li>attrname (String): name of an attribute</li>
|
|
70
|
+
<li>value (String): value of an attribute</li>
|
|
71
|
+
</ul></dd>
|
|
72
|
+
<dt><h4><a name="label-13" id="label-13"><code>def_var(<var>name</var>="<var>noname</var>",<var>nlev</var>=<var>0</var>,<var>option</var>="<var>99</var>",<var>description</var>="")</code></a></h4></dt><!-- RDLabel: "def_var" -->
|
|
73
|
+
<dd>
|
|
74
|
+
<p>define a variable</p>
|
|
75
|
+
<p>ARGUMENTS</p>
|
|
76
|
+
<ul>
|
|
77
|
+
<li>name (String): name of the variable</li>
|
|
78
|
+
<li>nlev (Integer): number of vertical levels</li>
|
|
79
|
+
<li>option (String): variable placement option
|
|
80
|
+
("99": normal, "-1,30": transpose lon and lat)</li>
|
|
81
|
+
</ul></dd>
|
|
82
|
+
<dt><h4><a name="label-14" id="label-14"><code>var( <var>varname</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "var" -->
|
|
83
|
+
<dd>
|
|
84
|
+
<p>opens an existing variable in the file. </p>
|
|
85
|
+
<p>ARGUMENTS</p>
|
|
86
|
+
<ul>
|
|
87
|
+
<li>varname (String): name of the variable to open</li>
|
|
88
|
+
</ul>
|
|
89
|
+
<p>RETURN VALUE</p>
|
|
90
|
+
<ul>
|
|
91
|
+
<li>a GrADSVar object. </li>
|
|
92
|
+
</ul></dd>
|
|
93
|
+
<dt><h4><a name="label-15" id="label-15"><code>vars( <var>names</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "vars" -->
|
|
94
|
+
<dd>
|
|
95
|
+
<p>opens existing variables in the file. </p>
|
|
96
|
+
<p>ARGUMENTS</p>
|
|
97
|
+
<ul>
|
|
98
|
+
<li>names (Array): names(String) of the variable to open</li>
|
|
99
|
+
</ul>
|
|
100
|
+
<p>RETURN VALUE</p>
|
|
101
|
+
<ul>
|
|
102
|
+
<li>Array of GrADSVar objects.
|
|
103
|
+
returns all variables if names==nil</li>
|
|
104
|
+
</ul></dd>
|
|
105
|
+
<dt><h4><a name="label-16" id="label-16"><code>get_att( <var>key</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "get_att" -->
|
|
106
|
+
<dd>
|
|
107
|
+
returns tha value of the global attribute</dd>
|
|
108
|
+
<dt><h4><a name="label-17" id="label-17"><code>dim_names</code></a></h4></dt><!-- RDLabel: "dim_names" -->
|
|
109
|
+
<dd>
|
|
110
|
+
returns the names of all dimensions in the control file.</dd>
|
|
111
|
+
<dt><h4><a name="label-18" id="label-18"><code>var_names</code></a></h4></dt><!-- RDLabel: "var_names" -->
|
|
112
|
+
<dd>
|
|
113
|
+
returns the names of all variables in the control file.</dd>
|
|
114
|
+
<dt><h4><a name="label-19" id="label-19"><code>att_names</code></a></h4></dt><!-- RDLabel: "att_names" -->
|
|
115
|
+
<dd>
|
|
116
|
+
returns the names of all the global attributes.</dd>
|
|
117
|
+
<dt><h4><a name="label-20" id="label-20"><code>to_ctl</code></a></h4></dt><!-- RDLabel: "to_ctl" -->
|
|
118
|
+
<dd>
|
|
119
|
+
<p>returns the contents of the corresponding control file as a String.</p>
|
|
120
|
+
<p>REMARK</p>
|
|
121
|
+
<ul>
|
|
122
|
+
<li>The contents is reconstructed from the internal data of the object.
|
|
123
|
+
Therefore, even when the object is based on a read-only control file,
|
|
124
|
+
it is not necessarily the same as the original one. It is especially
|
|
125
|
+
true when the object was modified after it is opened.</li>
|
|
126
|
+
</ul></dd>
|
|
127
|
+
<dt><h4><a name="label-21" id="label-21"><code>get(<var>name</var>, <var>z</var>, <var>t</var>)</code></a></h4></dt><!-- RDLabel: "get" -->
|
|
128
|
+
<dd>
|
|
129
|
+
<p>reads the binary data and returns as a NArray.</p>
|
|
130
|
+
<p>ARGUMENTS</p>
|
|
131
|
+
<ul>
|
|
132
|
+
<li>name (String): name of the variable to read</li>
|
|
133
|
+
<li>z (Integer, currently): vertical level to read (0,1,2,...; starting
|
|
134
|
+
from 0). Currently only one vertical levels must be chosen, but in the
|
|
135
|
+
future, it is planned to support multiple levels.</li>
|
|
136
|
+
<li>t (Integer, currently): time to read (0,1,2,...; starting
|
|
137
|
+
from 0). Currently only one time must be chosen, but in the
|
|
138
|
+
future, it is planned to support multiple times.</li>
|
|
139
|
+
</ul></dd>
|
|
140
|
+
<dt><h4><a name="label-22" id="label-22"><code>put(<var>ary</var>)</code></a></h4></dt><!-- RDLabel: "put" -->
|
|
141
|
+
<dd>
|
|
142
|
+
<p>writes the NArray on the binary data file. </p>
|
|
143
|
+
<p>ARGUMENTS</p>
|
|
144
|
+
<ul>
|
|
145
|
+
<li>ary (NArray): data to write. </li>
|
|
146
|
+
</ul></dd>
|
|
147
|
+
<dt><h4><a name="label-23" id="label-23"><code>varnames</code></a></h4></dt><!-- RDLabel: "varnames" -->
|
|
148
|
+
<dd>
|
|
149
|
+
Returns names of the variable in the GrADS file as an Array in the order
|
|
150
|
+
placed.</dd>
|
|
151
|
+
<dt><h4><a name="label-24" id="label-24"><code>dimensions</code></a></h4></dt><!-- RDLabel: "dimensions" -->
|
|
152
|
+
<dd>
|
|
153
|
+
<p>Returns info on the four dimensions.</p>
|
|
154
|
+
<p>RETURN VALUE</p>
|
|
155
|
+
<ul>
|
|
156
|
+
<li><p>an Array of 4 elements: dimension[0] for x, dimension[1] for y,
|
|
157
|
+
dimension[2] for z, and dimension[3] for t. Each of them is a
|
|
158
|
+
Hash like the following:</p>
|
|
159
|
+
<pre>{:name=>"x",
|
|
160
|
+
:len=>132,
|
|
161
|
+
:flag=>"LINEAR",
|
|
162
|
+
:spec=>"-0.7500 1.5000",
|
|
163
|
+
:start=>-0.75, :increment=>1.5,
|
|
164
|
+
:description=>"longitude",
|
|
165
|
+
:units=>"degrees_east"}</pre>
|
|
166
|
+
<p>Here, :len, :flag, and :spec are directly from the control file, while
|
|
167
|
+
others are derived properties for internal use. </p></li>
|
|
168
|
+
</ul>
|
|
169
|
+
<p>WARNING</p>
|
|
170
|
+
<ul>
|
|
171
|
+
<li>Each elements of the return value is not a clone but is a direct
|
|
172
|
+
association to an internal object of the object. Therefore, to
|
|
173
|
+
modify it is to modify the object. That is, dimensions[0][:len]=10
|
|
174
|
+
would actually change the internal variable, while dimensions[0]=nil
|
|
175
|
+
has no effect (the former is a substitution IN a Hash, while the latter
|
|
176
|
+
is a substitution OF the Hash).</li>
|
|
177
|
+
</ul></dd>
|
|
178
|
+
<dt><h4><a name="label-25" id="label-25"><code>get_dim(<var>dim</var>)</code></a></h4></dt><!-- RDLabel: "get_dim" -->
|
|
179
|
+
<dd>
|
|
180
|
+
<p>returns positions of a dimension as an NArray.</p>
|
|
181
|
+
<p>ARGUMENTS</p>
|
|
182
|
+
<ul>
|
|
183
|
+
<li>dim (String): a dimension name</li>
|
|
184
|
+
</ul>
|
|
185
|
+
<p>RETURN VALUE</p>
|
|
186
|
+
<ul>
|
|
187
|
+
<li>an NArray</li>
|
|
188
|
+
</ul></dd>
|
|
189
|
+
<dt><h4><a name="label-26" id="label-26"><code>title</code></a></h4></dt><!-- RDLabel: "title" -->
|
|
190
|
+
<dt><h4><a name="label-27" id="label-27"><code>title=</code></a></h4></dt><!-- RDLabel: "title=" -->
|
|
191
|
+
<dd>
|
|
192
|
+
get/set the title</dd>
|
|
193
|
+
<dt><h4><a name="label-28" id="label-28"><code>undef</code></a></h4></dt><!-- RDLabel: "undef" -->
|
|
194
|
+
<dt><h4><a name="label-29" id="label-29"><code>undef=</code></a></h4></dt><!-- RDLabel: "undef=" -->
|
|
195
|
+
<dd>
|
|
196
|
+
get/set the undef value</dd>
|
|
197
|
+
<dt><h4><a name="label-30" id="label-30"><code>dset</code></a></h4></dt><!-- RDLabel: "dset" -->
|
|
198
|
+
<dt><h4><a name="label-31" id="label-31"><code>dset=</code></a></h4></dt><!-- RDLabel: "dset=" -->
|
|
199
|
+
<dd>
|
|
200
|
+
get/set the dset string</dd>
|
|
201
|
+
</dl>
|
|
202
|
+
<h1><a name="label-32" id="label-32">GrADSVar -- a class for a variable of GrADS gridded datasets</a></h1><!-- RDLabel: "GrADSVar ­­ a class for a variable of GrADS gridded datasets" -->
|
|
203
|
+
<p>by R Mizuta</p>
|
|
204
|
+
<h2><a name="label-33" id="label-33">Overview</a></h2><!-- RDLabel: "Overview" -->
|
|
205
|
+
<p>a GrADSVar object corresponds to one variable in a GrADS control file.
|
|
206
|
+
It is intended to behave as a correspondent of a NetCDFVar object. </p>
|
|
207
|
+
<h2><a name="label-34" id="label-34">Current Limitations</a></h2><!-- RDLabel: "Current Limitations" -->
|
|
208
|
+
<ul>
|
|
209
|
+
<li>Only a part of the methods can work. </li>
|
|
210
|
+
<li>Writing methods are not supported. </li>
|
|
211
|
+
</ul>
|
|
212
|
+
<h2><a name="label-35" id="label-35">Class Methods</a></h2><!-- RDLabel: "Class Methods" -->
|
|
213
|
+
<dl>
|
|
214
|
+
<dt><h4><a name="label-36" id="label-36"><code>GrADSVar.new(<var>file</var>, <var>varname</var>)</code></a></h4></dt><!-- RDLabel: "GrADSVar.new" -->
|
|
215
|
+
<dd>
|
|
216
|
+
<p>make a new GrADSVar object. </p>
|
|
217
|
+
<p>ARGUMENTS</p>
|
|
218
|
+
<ul>
|
|
219
|
+
<li>file (GrADS_Gridded or String): a GrADS_Gridded object or
|
|
220
|
+
a name of the control file to open</li>
|
|
221
|
+
<li>varname (String): name of the variable to open</li>
|
|
222
|
+
</ul></dd>
|
|
223
|
+
</dl>
|
|
224
|
+
<h2><a name="label-37" id="label-37">Methods</a></h2><!-- RDLabel: "Methods" -->
|
|
225
|
+
<dl>
|
|
226
|
+
<dt><h4><a name="label-38" id="label-38"><code>shape_ul0</code></a></h4></dt><!-- RDLabel: "shape_ul0" -->
|
|
227
|
+
<dd>
|
|
228
|
+
<p>returns the shape of the variable, but the length of the unlimited
|
|
229
|
+
dimension is set to zero.</p>
|
|
230
|
+
<p>RETURN VALUE</p>
|
|
231
|
+
<ul>
|
|
232
|
+
<li>Array. [length of 0th dim, length of 1st dim,.. ]</li>
|
|
233
|
+
</ul></dd>
|
|
234
|
+
<dt><h4><a name="label-39" id="label-39"><code>shape_current</code></a></h4></dt><!-- RDLabel: "shape_current" -->
|
|
235
|
+
<dd>
|
|
236
|
+
<p>returns the current shape of the variable.</p>
|
|
237
|
+
<p>RETURN VALUE</p>
|
|
238
|
+
<ul>
|
|
239
|
+
<li>Array. [length of 0th dim, length of 1st dim,.. ]</li>
|
|
240
|
+
</ul></dd>
|
|
241
|
+
<dt><h4><a name="label-40" id="label-40"><code>dim_names</code></a></h4></dt><!-- RDLabel: "dim_names" -->
|
|
242
|
+
<dd>
|
|
243
|
+
returns the names of all dimensions of the variable.</dd>
|
|
244
|
+
<dt><h4><a name="label-41" id="label-41"><code>att_names</code></a></h4></dt><!-- RDLabel: "att_names" -->
|
|
245
|
+
<dd>
|
|
246
|
+
returns the names of all attributes of the variable.</dd>
|
|
247
|
+
<dt><h4><a name="label-42" id="label-42"><code>name</code></a></h4></dt><!-- RDLabel: "name" -->
|
|
248
|
+
<dd>
|
|
249
|
+
returns the name of the variable. </dd>
|
|
250
|
+
<dt><h4><a name="label-43" id="label-43"><code>ndims</code></a></h4></dt><!-- RDLabel: "ndims" -->
|
|
251
|
+
<dd>
|
|
252
|
+
returns the number of dimensions in the file (always 4). </dd>
|
|
253
|
+
<dt><h4><a name="label-44" id="label-44"><code>rank</code></a></h4></dt><!-- RDLabel: "rank" -->
|
|
254
|
+
<dd>
|
|
255
|
+
alias of ndims</dd>
|
|
256
|
+
<dt><h4><a name="label-45" id="label-45"><code>vartype</code></a></h4></dt><!-- RDLabel: "vartype" -->
|
|
257
|
+
<dd>
|
|
258
|
+
returns "sfloat" in order to behave as NetCDFVar#vartype. </dd>
|
|
259
|
+
<dt><h4><a name="label-46" id="label-46"><code>natts</code></a></h4></dt><!-- RDLabel: "natts" -->
|
|
260
|
+
<dd>
|
|
261
|
+
returns the number of attributes of the variable.</dd>
|
|
262
|
+
<dt><h4><a name="label-47" id="label-47"><code>file</code></a></h4></dt><!-- RDLabel: "file" -->
|
|
263
|
+
<dd>
|
|
264
|
+
returns the file name that controls the variable. </dd>
|
|
265
|
+
<dt><h4><a name="label-48" id="label-48"><code>get_att( <var>name</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "get_att" -->
|
|
266
|
+
<dd>
|
|
267
|
+
returns tha value of the attribute of the variable.</dd>
|
|
268
|
+
<dt><h4><a name="label-49" id="label-49"><code>put_att( <var>name</var>, <var>value</var> )</code></a></h4></dt><!-- RDLabel: "put_att" -->
|
|
269
|
+
<dd>
|
|
270
|
+
<p>set an attribute of the variable. </p>
|
|
271
|
+
<p>ARGUMENTS</p>
|
|
272
|
+
<ul>
|
|
273
|
+
<li>name (String): name of an attribute</li>
|
|
274
|
+
<li>value (String): value of an attribute</li>
|
|
275
|
+
</ul></dd>
|
|
276
|
+
<dt><h4><a name="label-50" id="label-50"><code>get(<var>hash</var>=<var>nil</var>)</code></a></h4></dt><!-- RDLabel: "get" -->
|
|
277
|
+
<dd>
|
|
278
|
+
<p>returns values of the variable.</p>
|
|
279
|
+
<p>ARGUMENTS</p>
|
|
280
|
+
<ul>
|
|
281
|
+
<li>hash (Hash) : Optional argument to limit the portion of the
|
|
282
|
+
variable to output values. If omitted, the whole variable is
|
|
283
|
+
subject to the output. This argument accepts a Hash whose keys
|
|
284
|
+
contain either "index" or a combination of "start","end", and
|
|
285
|
+
"stride". The value of "index" points the index of a scalar
|
|
286
|
+
portion of the variable. The other case is used to designate a
|
|
287
|
+
regularly ordered subset, where "start" and "end" specifies
|
|
288
|
+
bounds in each dimension and "stride" specifies intervals in
|
|
289
|
+
it. As in Array "start", "end", and "index" can take negative
|
|
290
|
+
values to specify index backward from the end. However,
|
|
291
|
+
"stride" has to be positive, so reversing the array must be
|
|
292
|
+
done afterwards if you like.</li>
|
|
293
|
+
</ul>
|
|
294
|
+
<p>RETURN VALUE</p>
|
|
295
|
+
<ul>
|
|
296
|
+
<li>an NArray object</li>
|
|
297
|
+
</ul>
|
|
298
|
+
<p>REMARK
|
|
299
|
+
"stride","index" is not supported yet.</p></dd>
|
|
300
|
+
<dt><h4><a name="label-51" id="label-51"><code>[]</code></a></h4></dt><!-- RDLabel: "[]" -->
|
|
301
|
+
<dd>
|
|
302
|
+
Same as GrADSVar#get but a subset is specified as in the method []
|
|
303
|
+
of NArray. </dd>
|
|
304
|
+
</dl>
|
|
305
|
+
|
|
306
|
+
</body>
|
|
307
|
+
</html>
|