gphys 1.1.1a
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- data/ChangeLog +1777 -0
- data/LICENSE.txt +34 -0
- data/README +33 -0
- data/Rakefile +57 -0
- data/TODO_ep_flux +6 -0
- data/bin/gdir_client +27 -0
- data/bin/gdir_server +129 -0
- data/bin/gpaop +146 -0
- data/bin/gpcat +148 -0
- data/bin/gpcut +102 -0
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- data/bin/gpmath +120 -0
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- data/lib/numru/derivative.rb +348 -0
- data/lib/numru/ganalysis/covariance.rb +154 -0
- data/lib/numru/ganalysis/eof.rb +298 -0
- data/lib/numru/ganalysis/histogram.rb +252 -0
- data/lib/numru/ganalysis/met.rb +317 -0
- data/lib/numru/ganalysis/planet.rb +182 -0
- data/lib/numru/ganalysis.rb +7 -0
- data/lib/numru/gdir.rb +1038 -0
- data/lib/numru/gdir_connect_ftp-like.rb +149 -0
- data/lib/numru/ggraph.rb +5838 -0
- data/lib/numru/ggraph_on_merdional_section.rb +178 -0
- data/lib/numru/gphys/assoccoords.rb +359 -0
- data/lib/numru/gphys/attribute.rb +129 -0
- data/lib/numru/gphys/attributenetcdf.rb +80 -0
- data/lib/numru/gphys/axis.rb +963 -0
- data/lib/numru/gphys/coordmapping.rb +286 -0
- data/lib/numru/gphys/coordtransform.rb +209 -0
- data/lib/numru/gphys/derivative.rb +314 -0
- data/lib/numru/gphys/ep_flux.rb +868 -0
- data/lib/numru/gphys/gpcommon.rb +52 -0
- data/lib/numru/gphys/gphys.rb +1207 -0
- data/lib/numru/gphys/gphys_fft.rb +886 -0
- data/lib/numru/gphys/gphys_grads_io.rb +212 -0
- data/lib/numru/gphys/gphys_grib_io.rb +214 -0
- data/lib/numru/gphys/gphys_gtool3_io.rb +162 -0
- data/lib/numru/gphys/gphys_hdfeos5_io.rb +672 -0
- data/lib/numru/gphys/gphys_io.rb +452 -0
- data/lib/numru/gphys/gphys_io_common.rb +126 -0
- data/lib/numru/gphys/gphys_netcdf_io.rb +800 -0
- data/lib/numru/gphys/gphys_nusdas_io.rb +132 -0
- data/lib/numru/gphys/grads_gridded.rb +1638 -0
- data/lib/numru/gphys/grib.rb +2049 -0
- data/lib/numru/gphys/grib_params.rb +1465 -0
- data/lib/numru/gphys/grid.rb +723 -0
- data/lib/numru/gphys/gtool3.rb +771 -0
- data/lib/numru/gphys/interpolate.rb +854 -0
- data/lib/numru/gphys/narray_ext.rb +34 -0
- data/lib/numru/gphys/netcdf_convention.rb +406 -0
- data/lib/numru/gphys/subsetmapping.rb +332 -0
- data/lib/numru/gphys/unumeric.rb +522 -0
- data/lib/numru/gphys/varray.rb +1109 -0
- data/lib/numru/gphys/varraycomposite.rb +415 -0
- data/lib/numru/gphys/varraygrads.rb +225 -0
- data/lib/numru/gphys/varraygrib.rb +177 -0
- data/lib/numru/gphys/varraygtool3.rb +226 -0
- data/lib/numru/gphys/varrayhdfeos5.rb +451 -0
- data/lib/numru/gphys/varraynetcdf.rb +350 -0
- data/lib/numru/gphys/varraynusdas.rb +59 -0
- data/lib/numru/gphys.rb +9 -0
- data/lib/numru/htdir.rb +170 -0
- data/multibitIO.c +567 -0
- data/sample/cira86_to_nc.rb +122 -0
- data/sample/druby_cli1.rb +21 -0
- data/sample/druby_cli2.rb +34 -0
- data/sample/druby_serv1.rb +30 -0
- data/sample/druby_serv2.rb +64 -0
- data/sample/ep_flux/demo_NCEP_1.rb +48 -0
- data/sample/ep_flux/demo_NCEP_2.rb +57 -0
- data/sample/ep_flux/demo_NCEP_3.rb +81 -0
- data/sample/ggraph_latlon_labelling_dr002690.rb +159 -0
- data/sample/ggraph_mapfit-axes_dr002687.rb +131 -0
- data/sample/map_projection.rb +121 -0
- data/sample/ncep_theta_coord.rb +79 -0
- data/test/eof_slp.rb +28 -0
- data/test/mltbit.dat +0 -0
- data/test/test_ep_flux.rb +533 -0
- data/test/test_multibitIO.rb +19 -0
- data/testdata/T.jan.ctl +12 -0
- data/testdata/T.jan.dat +0 -0
- data/testdata/T.jan.grib +0 -0
- data/testdata/T.jan.nc +0 -0
- data/testdata/T.jan.packed.withmiss.nc +0 -0
- data/testdata/UV.jan.nc +0 -0
- data/testdata/assoc_crds.nc +0 -0
- data/testdata/cira86.dat +1332 -0
- metadata +621 -0
data/doc/gpcat.html
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<?xml version="1.0" ?>
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<!DOCTYPE html
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<html xmlns="http://www.w3.org/1999/xhtml">
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<head>
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<title>../bin/gpcat</title>
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</head>
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<body>
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<h1><a name="label-0" id="label-0">NAME</a></h1><!-- RDLabel: "NAME" -->
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<p>gpcat - Read a variable in multiple NetCDF files, concatenate and write them to a single netcdf file. </p>
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<h1><a name="label-1" id="label-1">DESCRIPTION</a></h1><!-- RDLabel: "DESCRIPTION" -->
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<p><em>gpcat</em> is command line tools for read a variable in multiple</p>
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<pre>NetCDF files, concatenate and write them to a single netcdf file.</pre>
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<h1><a name="label-2" id="label-2">USAGE</a></h1><!-- RDLabel: "USAGE" -->
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<pre>% gpcat -v VAR [options] FILE1 FILE2...</pre>
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<h1><a name="label-3" id="label-3">OPTIONS</a></h1><!-- RDLabel: "OPTIONS" -->
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<dl>
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<dt><h4><a name="label-4" id="label-4">-h, --help</a></h4></dt><!-- RDLabel: "-h, ­­help" -->
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<dd>
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print this message.
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</dd>
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<dt><h4><a name="label-5" id="label-5">-v var, --variable var</a></h4></dt><!-- RDLabel: "-v var, ­­variable var" -->
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<dd>
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variable name (required).
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</dd>
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<dt><h4><a name="label-6" id="label-6">-s sfmt, --slice sfmt</a></h4></dt><!-- RDLabel: "-s sfmt, ­­slice sfmt" -->
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<dd>
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slice,thinnng (optional).
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</dd>
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<dt><h4><a name="label-7" id="label-7">-o file, --output file</a></h4></dt><!-- RDLabel: "-o file, ­­output file" -->
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<dd>
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output filename (optional). Default output filename is 'gphys.nc'.
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</dd>
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</dl>
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<h1><a name="label-8" id="label-8">HISTORY</a></h1><!-- RDLabel: "HISTORY" -->
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<pre>2005/05/17 S Takehiro (created)
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2005/08/10 S Takehiro (utilize internal function for printing help message)
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2005/08/21 S Takehiro (global attributes copied to the output file)
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2005/08/23 S Takehiro (common methods to gp* command moved to gpcommon.rb)
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2010/03/10 Y SASAKI (change help block into RD format)</pre>
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</body>
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</html>
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data/doc/gpcut.html
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<?xml version="1.0" ?>
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<!DOCTYPE html
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PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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<html xmlns="http://www.w3.org/1999/xhtml">
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<head>
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<title>../bin/gpcut</title>
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</head>
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<body>
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+
<h1><a name="label-0" id="label-0">NAME</a></h1><!-- RDLabel: "NAME" -->
|
|
11
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<p>gpcut - Extract, slicing and thinning a GPhys variable.</p>
|
|
12
|
+
<h1><a name="label-1" id="label-1">DESCRIPTION</a></h1><!-- RDLabel: "DESCRIPTION" -->
|
|
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<p><em>gpcut</em> is command line tools for extract, slicing and thinning a GPhys variables.</p>
|
|
14
|
+
<h1><a name="label-2" id="label-2">USAGE</a></h1><!-- RDLabel: "USAGE" -->
|
|
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|
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<pre>% gpcut [options] path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]</pre>
|
|
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|
+
<h1><a name="label-3" id="label-3">OPTIONS</a></h1><!-- RDLabel: "OPTIONS" -->
|
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<dl>
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+
<dt><h4><a name="label-4" id="label-4">-h, --help</a></h4></dt><!-- RDLabel: "-h, ­­help" -->
|
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<dd>
|
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20
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+
print this message.
|
|
21
|
+
</dd>
|
|
22
|
+
<dt><h4><a name="label-5" id="label-5">-m dim, --mean dim</a></h4></dt><!-- RDLabel: "-m dim, ­­mean dim" -->
|
|
23
|
+
<dd>
|
|
24
|
+
average along dim axis (optional).
|
|
25
|
+
</dd>
|
|
26
|
+
<dt><h4><a name="label-6" id="label-6">-o file, --output file</a></h4></dt><!-- RDLabel: "-o file, ­­output file" -->
|
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<dd>
|
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28
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output filename (optional).
|
|
29
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Default output filename is 'gphys.nc'.
|
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+
</dd>
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</dl>
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+
<h1><a name="label-7" id="label-7">HISTORY</a></h1><!-- RDLabel: "HISTORY" -->
|
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<pre>2005/05/17 S Takehiro (created)
|
|
34
|
+
2005/07/15 S Takehiro (open_gturl method is used for opening gphys variable)
|
|
35
|
+
2005/08/10 S Takehiro (utilize internal function for printing help message)
|
|
36
|
+
2005/08/21 S Takehiro (global attributes copied to the output file)
|
|
37
|
+
2005/08/23 S Takehiro (common methods to gp* command moved to gpcommon.rb)
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|
38
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+
2010/03/10 Y SASAKI (change help block into RD format)</pre>
|
|
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|
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|
|
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</body>
|
|
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</html>
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data/doc/gphys.html
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<?xml version="1.0" ?>
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<!DOCTYPE html
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PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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<html xmlns="http://www.w3.org/1999/xhtml">
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<head>
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<title>../lib/numru/gphys/gphys.rb</title>
|
|
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</head>
|
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9
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<body>
|
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10
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+
<h1><a name="label-0" id="label-0">class NumRu::GPhys</a></h1><!-- RDLabel: "class NumRu::GPhys" -->
|
|
11
|
+
<h2><a name="label-1" id="label-1">Class Methods</a></h2><!-- RDLabel: "Class Methods" -->
|
|
12
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+
<dl>
|
|
13
|
+
<dt><h4><a name="label-2" id="label-2"><code>GPhys.new(<var>grid</var>, <var>data</var>)</code></a></h4></dt><!-- RDLabel: "GPhys.new" -->
|
|
14
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<dd>
|
|
15
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+
<p>Constructor.</p>
|
|
16
|
+
<p>ARGUMENTS</p>
|
|
17
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+
<ul>
|
|
18
|
+
<li>grid (a Grid) : the grid</li>
|
|
19
|
+
<li>data (a VArray) : the data. grid and data must have
|
|
20
|
+
the same shape.</li>
|
|
21
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+
</ul>
|
|
22
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<p>RETURN VALUE</p>
|
|
23
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+
<ul>
|
|
24
|
+
<li>a GPhys</li>
|
|
25
|
+
</ul>
|
|
26
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+
<p>NOTE</p>
|
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<ul>
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28
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+
<li>the arguments are NOT duplicated to construct a GPhys.</li>
|
|
29
|
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</ul></dd>
|
|
30
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+
<dt><h4><a name="label-3" id="label-3"><code>GPhys.each_along_dims(<var>gphyses</var>, *<var>loopdims</var>){...} # <var>a</var> <var>block</var> <var>is</var> <var>expected</var></code></a></h4></dt><!-- RDLabel: "GPhys.each_along_dims" -->
|
|
31
|
+
<dd>
|
|
32
|
+
<p>Iterator to process GPhys objects too big to read on memory at once.</p>
|
|
33
|
+
<p>Makes a loop (loops) by dividing the GPhys object(s) (<var>gphyses</var>)
|
|
34
|
+
with the dimension(s) specified by <var>loopdims</var>.
|
|
35
|
+
If the return value of the block is an Array, it is assumed to consist
|
|
36
|
+
of GPhys objects, and the return value of this method is an Array
|
|
37
|
+
in which the whole of the results are reconstructed as if no
|
|
38
|
+
iteration is made, which is the same behavior as
|
|
39
|
+
<var>GPhys::IO.each_along_dims_write</var>. If the return value of
|
|
40
|
+
the block is not an Array, this methods returns nil.</p>
|
|
41
|
+
<p>WARNING: Unlike <var>GPhys::IO.each_along_dims_write</var>,
|
|
42
|
+
the results of this method is NOT written in file(s),
|
|
43
|
+
so be careful about memory usage if you put an Array of GPhys as the
|
|
44
|
+
return value of the block. You will probably need to have the size
|
|
45
|
+
of them smaller than input data.</p>
|
|
46
|
+
<p>ARGUMENTS</p>
|
|
47
|
+
<ul>
|
|
48
|
+
<li>gphyses (GPhys or Array of GPhys): GPhys object(s) to be processed.
|
|
49
|
+
All of them must have dimensions specified with <var>loopdims</var>,
|
|
50
|
+
and their lengths must not vary among files. Other dimensions
|
|
51
|
+
are arbitrary, so, for example, <var>gphyses</var> could be
|
|
52
|
+
[a(lon,lat,time), b(lat,time)] as long as loopdims==["time"].</li>
|
|
53
|
+
<li>loopdims (Array of String or Integer) : name (when String) or
|
|
54
|
+
count starting from zero (when Integer) </li>
|
|
55
|
+
<li>expected block : Number of arguments == number of GPhys objects in
|
|
56
|
+
<var>gphyses</var>.</li>
|
|
57
|
+
</ul>
|
|
58
|
+
<p>RETURN VALUE</p>
|
|
59
|
+
<ul>
|
|
60
|
+
<li>If the return value of the block is an Array,
|
|
61
|
+
GPhys objects in which the whole results are written in
|
|
62
|
+
(the Array must consist of GPhys objects).
|
|
63
|
+
If the return value of the block is NOT an Array,
|
|
64
|
+
nil is returned.</li>
|
|
65
|
+
</ul>
|
|
66
|
+
<p>ERRORS</p>
|
|
67
|
+
<p>The following raise exceptions (in addition to errors in arguments).</p>
|
|
68
|
+
<ul>
|
|
69
|
+
<li>Dimensions specified by <var>loopdims</var> are not shared among
|
|
70
|
+
GPhys objects in <var>gphyses</var>.</li>
|
|
71
|
+
<li>Return value of the block is an Array, but it does not consist of
|
|
72
|
+
GPhys objects.</li>
|
|
73
|
+
<li>(Only when the return value of the block is an Array):
|
|
74
|
+
Dimension(s) used for looping (<var>loopdims</var>) is(are) eliminated
|
|
75
|
+
from the returned GPhys objects.</li>
|
|
76
|
+
</ul>
|
|
77
|
+
<p>USAGE</p>
|
|
78
|
+
<p>See the manual of <var>GPhys::IO.each_along_dims_write</var>.</p></dd>
|
|
79
|
+
</dl>
|
|
80
|
+
<h2><a name="label-4" id="label-4">Instance Methods</a></h2><!-- RDLabel: "Instance Methods" -->
|
|
81
|
+
<dl>
|
|
82
|
+
<dt><h4><a name="label-5" id="label-5"><code>data</code></a></h4></dt><!-- RDLabel: "data" -->
|
|
83
|
+
<dd>
|
|
84
|
+
<p>Returns the data object</p>
|
|
85
|
+
<p>RETURN VALUE</p>
|
|
86
|
+
<ul>
|
|
87
|
+
<li>a VArray</li>
|
|
88
|
+
</ul>
|
|
89
|
+
<p>NOTE</p>
|
|
90
|
+
<ul>
|
|
91
|
+
<li>the data object is NOT duplicated.</li>
|
|
92
|
+
</ul></dd>
|
|
93
|
+
<dt><h4><a name="label-6" id="label-6"><code>grid_copy</code></a></h4></dt><!-- RDLabel: "grid_copy" -->
|
|
94
|
+
<dd>
|
|
95
|
+
<p>Returns a copy (deep clone) of the grid object.</p>
|
|
96
|
+
<p>RETURN VALUE</p>
|
|
97
|
+
<ul>
|
|
98
|
+
<li>a Grid</li>
|
|
99
|
+
</ul>
|
|
100
|
+
<p>NOTE</p>
|
|
101
|
+
<ul>
|
|
102
|
+
<li>There is a PROTECTED method grid, which returns
|
|
103
|
+
the grid object without duplicating.</li>
|
|
104
|
+
</ul></dd>
|
|
105
|
+
<dt><h4><a name="label-7" id="label-7"><code>copy</code></a></h4></dt><!-- RDLabel: "copy" -->
|
|
106
|
+
<dd>
|
|
107
|
+
<p>Make a deep clone onto memory</p>
|
|
108
|
+
<p>RETURN VALUE</p>
|
|
109
|
+
<ul>
|
|
110
|
+
<li>a GPhys</li>
|
|
111
|
+
</ul></dd>
|
|
112
|
+
<dt><h4><a name="label-8" id="label-8"><code>name</code></a></h4></dt><!-- RDLabel: "name" -->
|
|
113
|
+
<dd>
|
|
114
|
+
<p>Returns the name of the GPhys object, which is equal to the
|
|
115
|
+
name of the data object in the GPhys object.</p>
|
|
116
|
+
<p>RETURN VALUE</p>
|
|
117
|
+
<ul>
|
|
118
|
+
<li>a String</li>
|
|
119
|
+
</ul></dd>
|
|
120
|
+
<dt><h4><a name="label-9" id="label-9"><code>name=(<var>nm</var>)</code></a></h4></dt><!-- RDLabel: "name=" -->
|
|
121
|
+
<dd>
|
|
122
|
+
<p>Set the name of the GPhys object.</p>
|
|
123
|
+
<p>ARGUMENTS</p>
|
|
124
|
+
<ul>
|
|
125
|
+
<li>nm (String)</li>
|
|
126
|
+
</ul>
|
|
127
|
+
<p>RETURN VALUE</p>
|
|
128
|
+
<ul>
|
|
129
|
+
<li>nm (the argument)</li>
|
|
130
|
+
</ul></dd>
|
|
131
|
+
<dt><h4><a name="label-10" id="label-10"><code>rename(<var>nm</var>)</code></a></h4></dt><!-- RDLabel: "rename" -->
|
|
132
|
+
<dd>
|
|
133
|
+
<p>Same as <a href="#label-9">name=</a>, but self is returned.</p>
|
|
134
|
+
<p>ARGUMENTS</p>
|
|
135
|
+
<ul>
|
|
136
|
+
<li>nm (String)</li>
|
|
137
|
+
</ul>
|
|
138
|
+
<p>RETURN VALUE</p>
|
|
139
|
+
<ul>
|
|
140
|
+
<li>self</li>
|
|
141
|
+
</ul></dd>
|
|
142
|
+
<dt><h4><a name="label-11" id="label-11"><code>val</code></a></h4></dt><!-- RDLabel: "val" -->
|
|
143
|
+
<dd>
|
|
144
|
+
<p>Returns data values</p>
|
|
145
|
+
<p>RETURN VALUE</p>
|
|
146
|
+
<ul>
|
|
147
|
+
<li>a NArray or NArrayMiss. It is always a copy and to write in it
|
|
148
|
+
will not affect self.</li>
|
|
149
|
+
</ul></dd>
|
|
150
|
+
<dt><h4><a name="label-12" id="label-12"><code>val=(<var>v</var>)</code></a></h4></dt><!-- RDLabel: "val=" -->
|
|
151
|
+
<dd>
|
|
152
|
+
<p>Writes in data values.</p>
|
|
153
|
+
<p>ARGUMENTS</p>
|
|
154
|
+
<ul>
|
|
155
|
+
<li>v (NArray, NArrayMiss, or Numeric) : data to be written in.</li>
|
|
156
|
+
</ul>
|
|
157
|
+
<p>RETURN VALUE</p>
|
|
158
|
+
<ul>
|
|
159
|
+
<li>v (the argument)</li>
|
|
160
|
+
</ul>
|
|
161
|
+
<p>NOTE</p>
|
|
162
|
+
<ul>
|
|
163
|
+
<li>the contents of v are copied in, unlike <a href="#label-13">replace_val</a></li>
|
|
164
|
+
</ul></dd>
|
|
165
|
+
<dt><h4><a name="label-13" id="label-13"><code>replace_val(<var>v</var>)</code></a></h4></dt><!-- RDLabel: "replace_val" -->
|
|
166
|
+
<dd>
|
|
167
|
+
<p>Replace the data values.</p>
|
|
168
|
+
<p>ARGUMENTS</p>
|
|
169
|
+
<ul>
|
|
170
|
+
<li>v (NArray or NArrayMiss) : data to be written in.</li>
|
|
171
|
+
</ul>
|
|
172
|
+
<p>RETURN VALUE</p>
|
|
173
|
+
<ul>
|
|
174
|
+
<li>self</li>
|
|
175
|
+
</ul>
|
|
176
|
+
<p>NOTE</p>
|
|
177
|
+
<ul>
|
|
178
|
+
<li>This method is similar to <a href="#label-12">val=</a>, but
|
|
179
|
+
the whole numeric data object is replaced with v.
|
|
180
|
+
It is not very meaningful if the data is in a file:
|
|
181
|
+
the file is not modified, but you just get an GPhys object on memory.</li>
|
|
182
|
+
</ul></dd>
|
|
183
|
+
<dt><h4><a name="label-14" id="label-14"><code>att_names</code></a></h4></dt><!-- RDLabel: "att_names" -->
|
|
184
|
+
<dd>
|
|
185
|
+
<p>Returns attribute names of the data object.</p>
|
|
186
|
+
<p>RETURN VALUE</p>
|
|
187
|
+
<ul>
|
|
188
|
+
<li>Array of String</li>
|
|
189
|
+
</ul></dd>
|
|
190
|
+
<dt><h4><a name="label-15" id="label-15"><code>get_att(<var>name</var>)</code></a></h4></dt><!-- RDLabel: "get_att" -->
|
|
191
|
+
<dd>
|
|
192
|
+
<p>Get the value of the attribute named name.</p>
|
|
193
|
+
<p>ARGUMENTS</p>
|
|
194
|
+
<ul>
|
|
195
|
+
<li>name (String)</li>
|
|
196
|
+
</ul>
|
|
197
|
+
<p>RETURN VALUE</p>
|
|
198
|
+
<ul>
|
|
199
|
+
<li>String, NArray, or nil</li>
|
|
200
|
+
</ul></dd>
|
|
201
|
+
<dt><h4><a name="label-16" id="label-16"><code>set_att(<var>name</var>, <var>val</var>)</code></a></h4></dt><!-- RDLabel: "set_att" -->
|
|
202
|
+
<dt><h4><a name="label-17" id="label-17"><code>put_att(<var>name</var>, <var>val</var>)</code></a></h4></dt><!-- RDLabel: "put_att" -->
|
|
203
|
+
<dd>
|
|
204
|
+
<p>Set an attribute of the data object</p>
|
|
205
|
+
<p>ARGUMENTS</p>
|
|
206
|
+
<ul>
|
|
207
|
+
<li>name (String)</li>
|
|
208
|
+
<li>val (String, NArray, or nil)</li>
|
|
209
|
+
</ul>
|
|
210
|
+
<p>RETURN VALUE</p>
|
|
211
|
+
<ul>
|
|
212
|
+
<li>self</li>
|
|
213
|
+
</ul></dd>
|
|
214
|
+
<dt><h4><a name="label-18" id="label-18"><code>del_att(<var>name</var>)</code></a></h4></dt><!-- RDLabel: "del_att" -->
|
|
215
|
+
<dd>
|
|
216
|
+
<p>Delete an attribute of the data object.</p>
|
|
217
|
+
<p>ARGUMENTS</p>
|
|
218
|
+
<ul>
|
|
219
|
+
<li>name (String)</li>
|
|
220
|
+
</ul>
|
|
221
|
+
<p>RETURN VALUE</p>
|
|
222
|
+
<ul>
|
|
223
|
+
<li>self</li>
|
|
224
|
+
</ul></dd>
|
|
225
|
+
<dt><h4><a name="label-19" id="label-19"><code>ntype</code></a></h4></dt><!-- RDLabel: "ntype" -->
|
|
226
|
+
<dd>
|
|
227
|
+
<p>Returns the numeric type of the data object.</p>
|
|
228
|
+
<p>RETURN VALUE</p>
|
|
229
|
+
<ul>
|
|
230
|
+
<li>String such as "float", and "sfloat"</li>
|
|
231
|
+
</ul>
|
|
232
|
+
<p>NOTE</p>
|
|
233
|
+
<ul>
|
|
234
|
+
<li>See also <a href="#label-20">typecode</a>.</li>
|
|
235
|
+
</ul></dd>
|
|
236
|
+
<dt><h4><a name="label-20" id="label-20"><code>typecode</code></a></h4></dt><!-- RDLabel: "typecode" -->
|
|
237
|
+
<dd>
|
|
238
|
+
<p>Returns the numeric type of the data object.</p>
|
|
239
|
+
<p>RETURN VALUE</p>
|
|
240
|
+
<ul>
|
|
241
|
+
<li>NArray constants such as NArray::FLOAT and NArray::SFLOAT.</li>
|
|
242
|
+
</ul>
|
|
243
|
+
<p>NOTE</p>
|
|
244
|
+
<ul>
|
|
245
|
+
<li>See also <a href="#label-19">ntype</a>.</li>
|
|
246
|
+
</ul></dd>
|
|
247
|
+
<dt><h4><a name="label-21" id="label-21"><code>units</code></a></h4></dt><!-- RDLabel: "units" -->
|
|
248
|
+
<dd>
|
|
249
|
+
<p>Returns the units of the data object</p>
|
|
250
|
+
<p>RETURN VALUE</p>
|
|
251
|
+
<ul>
|
|
252
|
+
<li>a Units</li>
|
|
253
|
+
</ul></dd>
|
|
254
|
+
<dt><h4><a name="label-22" id="label-22"><code>units=(<var>units</var>)</code></a></h4></dt><!-- RDLabel: "units=" -->
|
|
255
|
+
<dd>
|
|
256
|
+
<p>Changes the units of the data object</p>
|
|
257
|
+
<p>ARGUMENTS</p>
|
|
258
|
+
<ul>
|
|
259
|
+
<li>units (Units or String)</li>
|
|
260
|
+
</ul>
|
|
261
|
+
<p>RETURN VALUE</p>
|
|
262
|
+
<ul>
|
|
263
|
+
<li>units (the argument)</li>
|
|
264
|
+
</ul></dd>
|
|
265
|
+
<dt><h4><a name="label-23" id="label-23"><code>convert_units(<var>to</var>)</code></a></h4></dt><!-- RDLabel: "convert_units" -->
|
|
266
|
+
<dd>
|
|
267
|
+
<p>Convert the units of the data object</p>
|
|
268
|
+
<p>ARGUMENTS</p>
|
|
269
|
+
<ul>
|
|
270
|
+
<li>to (a Units)</li>
|
|
271
|
+
</ul>
|
|
272
|
+
<p>RETURN VALUE</p>
|
|
273
|
+
<ul>
|
|
274
|
+
<li>a GPhys</li>
|
|
275
|
+
</ul></dd>
|
|
276
|
+
<dt><h4><a name="label-24" id="label-24"><code>long_name</code></a></h4></dt><!-- RDLabel: "long_name" -->
|
|
277
|
+
<dd>
|
|
278
|
+
<p>Returns the "long_name" attribute the data object</p>
|
|
279
|
+
<p>RETURN VALUE</p>
|
|
280
|
+
<ul>
|
|
281
|
+
<li>a String</li>
|
|
282
|
+
</ul></dd>
|
|
283
|
+
<dt><h4><a name="label-25" id="label-25"><code>long_name=(<var>to</var>)</code></a></h4></dt><!-- RDLabel: "long_name=" -->
|
|
284
|
+
<dd>
|
|
285
|
+
<p>Changes/sets the "long_name" attribute the data object</p>
|
|
286
|
+
<p>ARGUMENTS</p>
|
|
287
|
+
<ul>
|
|
288
|
+
<li>to (a String)</li>
|
|
289
|
+
</ul>
|
|
290
|
+
<p>RETURN VALUE</p>
|
|
291
|
+
<ul>
|
|
292
|
+
<li>to (the argument)</li>
|
|
293
|
+
</ul></dd>
|
|
294
|
+
<dt><h4><a name="label-26" id="label-26"><code>[]</code></a></h4></dt><!-- RDLabel: "[]" -->
|
|
295
|
+
<dd>
|
|
296
|
+
<p>Returns a subset.</p>
|
|
297
|
+
<p>ARGUMENTS</p>
|
|
298
|
+
<ul>
|
|
299
|
+
<li>Same as those for NArray#[], NetCDFVar#[], etc.</li>
|
|
300
|
+
</ul>
|
|
301
|
+
<p>RETURN VALUE</p>
|
|
302
|
+
<ul>
|
|
303
|
+
<li>a GPhys</li>
|
|
304
|
+
</ul></dd>
|
|
305
|
+
<dt><h4><a name="label-27" id="label-27"><code>[] = </code></a></h4></dt><!-- RDLabel: "[]=" -->
|
|
306
|
+
<dd>
|
|
307
|
+
<p>Sets values of a subset</p>
|
|
308
|
+
<p>RETURN VALUE</p>
|
|
309
|
+
<ul>
|
|
310
|
+
<li>the data object on the rhs</li>
|
|
311
|
+
</ul></dd>
|
|
312
|
+
<dt><h4><a name="label-28" id="label-28"><code>cut</code></a></h4></dt><!-- RDLabel: "cut" -->
|
|
313
|
+
<dd>
|
|
314
|
+
<p>Similar to <a href="#label-26">[]</a>, but the subset is specified by physical coordinate.</p>
|
|
315
|
+
<p>ARGUMENTS</p>
|
|
316
|
+
<ul>
|
|
317
|
+
<li>pattern 1: similar to those for <a href="#label-26">[]</a>, where the first
|
|
318
|
+
argument specifies a subset for the first dimension.</li>
|
|
319
|
+
<li>pattern 2: by a Hash, in which keys are axis names.</li>
|
|
320
|
+
</ul>
|
|
321
|
+
<p>EXAMPLES</p>
|
|
322
|
+
<ul>
|
|
323
|
+
<li><p>Pattern 1</p>
|
|
324
|
+
<pre>gphys.cut(135.5,0..20.5,false)</pre></li>
|
|
325
|
+
<li><p>Pattern 2</p>
|
|
326
|
+
<pre>gphys.cut({'lon'=>135.5,'lat'=>0..20})</pre></li>
|
|
327
|
+
</ul>
|
|
328
|
+
<p>RETURN VALUE</p>
|
|
329
|
+
<ul>
|
|
330
|
+
<li>a GPhys</li>
|
|
331
|
+
</ul></dd>
|
|
332
|
+
<dt><h4><a name="label-29" id="label-29"><code>cut_rank_conserving</code></a></h4></dt><!-- RDLabel: "cut_rank_conserving" -->
|
|
333
|
+
<dd>
|
|
334
|
+
Similar to <a href="#label-28">cut</a>, but the rank is conserved by not eliminating
|
|
335
|
+
any dimension (whose length could be one).</dd>
|
|
336
|
+
<dt><h4><a name="label-30" id="label-30"><code>axnames</code></a></h4></dt><!-- RDLabel: "axnames" -->
|
|
337
|
+
<dd>
|
|
338
|
+
<p>Returns the names of the axes</p>
|
|
339
|
+
<p>RETURN VALUE</p>
|
|
340
|
+
<ul>
|
|
341
|
+
<li>an Array of String</li>
|
|
342
|
+
</ul></dd>
|
|
343
|
+
<dt><h4><a name="label-31" id="label-31"><code>rank</code></a></h4></dt><!-- RDLabel: "rank" -->
|
|
344
|
+
<dd>
|
|
345
|
+
<p>Returns the rank</p>
|
|
346
|
+
<p>RETURN VALUE</p>
|
|
347
|
+
<ul>
|
|
348
|
+
<li>an Integer</li>
|
|
349
|
+
</ul></dd>
|
|
350
|
+
<dt><h4><a name="label-32" id="label-32"><code>axis(<var>dim</var>)</code></a></h4></dt><!-- RDLabel: "axis" -->
|
|
351
|
+
<dd>
|
|
352
|
+
<p>Returns the Axis object of a dimension.</p>
|
|
353
|
+
<p>ARGEMENTS</p>
|
|
354
|
+
<ul>
|
|
355
|
+
<li>dim (Integer or String)</li>
|
|
356
|
+
</ul>
|
|
357
|
+
<p>RETURN VALUE</p>
|
|
358
|
+
<ul>
|
|
359
|
+
<li>an Axis</li>
|
|
360
|
+
</ul></dd>
|
|
361
|
+
<dt><h4><a name="label-33" id="label-33"><code>coord(<var>dim</var>)</code></a></h4></dt><!-- RDLabel: "coord" -->
|
|
362
|
+
<dt><h4><a name="label-34" id="label-34"><code>coordinate(<var>dim</var>)</code></a></h4></dt><!-- RDLabel: "coordinate" -->
|
|
363
|
+
<dd>
|
|
364
|
+
<p>Returns the coordinate variable</p>
|
|
365
|
+
<p>ARGUMENTS</p>
|
|
366
|
+
<ul>
|
|
367
|
+
<li>dim (Integer or String)</li>
|
|
368
|
+
</ul>
|
|
369
|
+
<p>RETURN VALUE</p>
|
|
370
|
+
<ul>
|
|
371
|
+
<li>a VArray</li>
|
|
372
|
+
</ul>
|
|
373
|
+
<p>NOTE</p>
|
|
374
|
+
<ul>
|
|
375
|
+
<li>coord(dim) is equivalent to axis(dim).pos</li>
|
|
376
|
+
</ul></dd>
|
|
377
|
+
<dt><h4><a name="label-35" id="label-35"><code>lost_axes</code></a></h4></dt><!-- RDLabel: "lost_axes" -->
|
|
378
|
+
<dd>
|
|
379
|
+
<p>Returns info on axes eliminated during operations.</p>
|
|
380
|
+
<p>Useful for annotation in plots, for example (See the code of GGraph
|
|
381
|
+
for an application).</p>
|
|
382
|
+
<p>RETURN VALUE</p>
|
|
383
|
+
<ul>
|
|
384
|
+
<li>an Array of String</li>
|
|
385
|
+
</ul></dd>
|
|
386
|
+
<dt><h4><a name="label-36" id="label-36"><code>dim_index( <var>dimname</var> )</code></a></h4></dt><!-- RDLabel: "dim_index" -->
|
|
387
|
+
<dd>
|
|
388
|
+
<p>Returns the integer id (count from zero) of the dimension</p>
|
|
389
|
+
<p>ARGUMENT</p>
|
|
390
|
+
<ul>
|
|
391
|
+
<li>dimname (String or Integer) : this method is trivial if is is an integer</li>
|
|
392
|
+
</ul>
|
|
393
|
+
<p>RETURN VALUE</p>
|
|
394
|
+
<ul>
|
|
395
|
+
<li>an Integer</li>
|
|
396
|
+
</ul></dd>
|
|
397
|
+
<dt><h4><a name="label-37" id="label-37"><code>integrate(<var>dim</var>)</code></a></h4></dt><!-- RDLabel: "integrate" -->
|
|
398
|
+
<dd>
|
|
399
|
+
<p>Integration along a dimension.</p>
|
|
400
|
+
<p>RETURN VALUE</p>
|
|
401
|
+
<ul>
|
|
402
|
+
<li>a GPhys</li>
|
|
403
|
+
</ul>
|
|
404
|
+
<p>NOTE</p>
|
|
405
|
+
<ul>
|
|
406
|
+
<li>Algorithm implementation is done in Axis class.</li>
|
|
407
|
+
</ul></dd>
|
|
408
|
+
<dt><h4><a name="label-38" id="label-38"><code>average(<var>dim</var>)</code></a></h4></dt><!-- RDLabel: "average" -->
|
|
409
|
+
<dd>
|
|
410
|
+
<p>Averaging along a dimension.</p>
|
|
411
|
+
<p>RETURN VALUE</p>
|
|
412
|
+
<ul>
|
|
413
|
+
<li>a GPhys</li>
|
|
414
|
+
</ul>
|
|
415
|
+
<p>NOTE</p>
|
|
416
|
+
<ul>
|
|
417
|
+
<li>Algorithm implementation is done in Axis class.</li>
|
|
418
|
+
</ul></dd>
|
|
419
|
+
<dt><h4><a name="label-39" id="label-39"><code>eddy(*<var>dim</var>)</code></a></h4></dt><!-- RDLabel: "eddy" -->
|
|
420
|
+
<dd>
|
|
421
|
+
<p>Deviation from mean</p>
|
|
422
|
+
<p>ARGUMENT</p>
|
|
423
|
+
<ul>
|
|
424
|
+
<li>a list of dimensions (including none) [Integer or String] along which
|
|
425
|
+
the mean is taken.</li>
|
|
426
|
+
</ul>
|
|
427
|
+
<p>RETURN VALUE</p>
|
|
428
|
+
<ul>
|
|
429
|
+
<li>a GPhys</li>
|
|
430
|
+
</ul>
|
|
431
|
+
<p>NOTE</p>
|
|
432
|
+
<ul>
|
|
433
|
+
<li><p>Simply defined as</p>
|
|
434
|
+
<pre>def eddy(*dim)
|
|
435
|
+
self - self.mean(*dim)
|
|
436
|
+
end</pre></li>
|
|
437
|
+
</ul></dd>
|
|
438
|
+
<dt><h4><a name="label-40" id="label-40"><code>first1D</code></a></h4></dt><!-- RDLabel: "first1D" -->
|
|
439
|
+
<dd>
|
|
440
|
+
<p>Returns a 1D subset selecting the first elements of 2nd, 3rd, ..
|
|
441
|
+
dimensions, i.e., self[true, 0, 0, ...]. (For graphics)</p>
|
|
442
|
+
<p>ARGUMENTS</p>
|
|
443
|
+
<ul>
|
|
444
|
+
<li>(none)</li>
|
|
445
|
+
</ul>
|
|
446
|
+
<p>RETURN VALUE</p>
|
|
447
|
+
<ul>
|
|
448
|
+
<li>a GPhys</li>
|
|
449
|
+
</ul></dd>
|
|
450
|
+
<dt><h4><a name="label-41" id="label-41"><code>first2D</code></a></h4></dt><!-- RDLabel: "first2D" -->
|
|
451
|
+
<dd>
|
|
452
|
+
<p>Returns a 2D subset selecting the first elements of 3rd, 4th, ..
|
|
453
|
+
dimensions, i.e., self[true, true, 0, 0, ...]. (For graphics)</p>
|
|
454
|
+
<p>ARGUMENTS</p>
|
|
455
|
+
<ul>
|
|
456
|
+
<li>(none)</li>
|
|
457
|
+
</ul>
|
|
458
|
+
<p>RETURN VALUE</p>
|
|
459
|
+
<ul>
|
|
460
|
+
<li>a GPhys</li>
|
|
461
|
+
</ul></dd>
|
|
462
|
+
<dt><h4><a name="label-42" id="label-42"><code>first3D</code></a></h4></dt><!-- RDLabel: "first3D" -->
|
|
463
|
+
<dd>
|
|
464
|
+
<p>Returns a 3D subset selecting the first elements of 4th, 5th, ..
|
|
465
|
+
dimensions, i.e., self[true, true, true, 0, ...]. (For graphics)</p>
|
|
466
|
+
<p>ARGUMENTS</p>
|
|
467
|
+
<ul>
|
|
468
|
+
<li>(none)</li>
|
|
469
|
+
</ul>
|
|
470
|
+
<p>RETURN VALUE</p>
|
|
471
|
+
<ul>
|
|
472
|
+
<li>a GPhys</li>
|
|
473
|
+
</ul></dd>
|
|
474
|
+
<dt><h4><a name="label-43" id="label-43"><code>coerce(<var>other</var>)</code></a></h4></dt><!-- RDLabel: "coerce" -->
|
|
475
|
+
<dd>
|
|
476
|
+
<var>You know what it is.</var></dd>
|
|
477
|
+
<dt><h4><a name="label-44" id="label-44"><code>shape_coerce(<var>other</var>)</code></a></h4></dt><!-- RDLabel: "shape_coerce" -->
|
|
478
|
+
<dd>
|
|
479
|
+
Like <a href="#label-43">coerce</a>, but just changes shape without changing numeric type.</dd>
|
|
480
|
+
<dt><h4><a name="label-45" id="label-45"><code>transpose(*<var>dims</var>)</code></a></h4></dt><!-- RDLabel: "transpose" -->
|
|
481
|
+
<dd>
|
|
482
|
+
<p>Transpose.</p>
|
|
483
|
+
<p>ARGUMENTS</p>
|
|
484
|
+
<ul>
|
|
485
|
+
<li>dims (integers) : for example, [1,0] to transpose a 2D object.
|
|
486
|
+
For 3D objects, [1,0,2], [2,1,0], etc.etc.</li>
|
|
487
|
+
</ul>
|
|
488
|
+
<p>RETURN VALUE</p>
|
|
489
|
+
<ul>
|
|
490
|
+
<li>a GPhys</li>
|
|
491
|
+
</ul></dd>
|
|
492
|
+
<dt><h4><a name="label-46" id="label-46"><code>shape_current</code></a></h4></dt><!-- RDLabel: "shape_current" -->
|
|
493
|
+
<dd>
|
|
494
|
+
<p>Returns the current shape of the GPhys object.</p>
|
|
495
|
+
<p>RETURN VALUE</p>
|
|
496
|
+
<ul>
|
|
497
|
+
<li>an Array of Integer</li>
|
|
498
|
+
</ul></dd>
|
|
499
|
+
<dt><h4><a name="label-47" id="label-47"><code>shape</code></a></h4></dt><!-- RDLabel: "shape" -->
|
|
500
|
+
<dd>
|
|
501
|
+
Aliased to <a href="#label-46">shape_current</a></dd>
|
|
502
|
+
<dt><h4><a name="label-48" id="label-48"><code>cyclic_ext(<var>dim_or_dimname</var>, <var>modulo</var>)</code></a></h4></dt><!-- RDLabel: "cyclic_ext" -->
|
|
503
|
+
<dd>
|
|
504
|
+
<p>Extend a dimension cyclically.</p>
|
|
505
|
+
<p>The extension is done only when adding one grid point makes a full circle.
|
|
506
|
+
Thus, data at coordinate values [0,90,180,270] with modulo 360 are extended
|
|
507
|
+
(to at [0,90,180,270,360]), but data at [0,90,180] are not extended with
|
|
508
|
+
the same modulo: in this case, self is returned.</p>
|
|
509
|
+
<p>ARGUMENTS</p>
|
|
510
|
+
<ul>
|
|
511
|
+
<li>dim_or_dimname (String or Integer)</li>
|
|
512
|
+
<li>modulo (Numeric)</li>
|
|
513
|
+
</ul>
|
|
514
|
+
<p>RETURN VALUE</p>
|
|
515
|
+
<ul>
|
|
516
|
+
<li>a GPhys (possibly self)</li>
|
|
517
|
+
</ul></dd>
|
|
518
|
+
</dl>
|
|
519
|
+
<h3><a name="label-49" id="label-49">Math functions (instance methods)</a></h3><!-- RDLabel: "Math functions (instance methods)" -->
|
|
520
|
+
<h4><a name="label-50" id="label-50">sqrt, exp, log, log10, log2, sin, cos, tan, sinh, cosh, tanh, asin, acos, atan, asinh, acosh, atanh, csc, sec, cot, csch, sech, coth, acsc, asec, acot, acsch, asech, acoth</a></h4><!-- RDLabel: "sqrt, exp, log, log10, log2, sin, cos, tan, sinh, cosh, tanh, asin, acos, atan, asinh, acosh, atanh, csc, sec, cot, csch, sech, coth, acsc, asec, acot, acsch, asech, acoth" -->
|
|
521
|
+
<h3><a name="label-51" id="label-51">Binary operators</a></h3><!-- RDLabel: "Binary operators" -->
|
|
522
|
+
<h4><a name="label-52" id="label-52">-, +, *, /, %, **, .add!, .sub!, .mul!, .div!, mod!, >, >=, <, <=, &, |, ^, .eq, .ne, .gt, .ge, .lt, .le, .and, .or, .xor, .not</a></h4><!-- RDLabel: "-, +, *, /, %, **, .add!, .sub!, .mul!, .div!, mod!, >, >=, <, <=, &, |, ^, .eq, .ne, .gt, .ge, .lt, .le, .and, .or, .xor, .not" -->
|
|
523
|
+
<h3><a name="label-53" id="label-53">Unary operators</a></h3><!-- RDLabel: "Unary operators" -->
|
|
524
|
+
<h4><a name="label-54" id="label-54">~ - +</a></h4><!-- RDLabel: "~ - +" -->
|
|
525
|
+
<h3><a name="label-55" id="label-55">Mean etc (instance methods)</a></h3><!-- RDLabel: "Mean etc (instance methods)" -->
|
|
526
|
+
<h4><a name="label-56" id="label-56">mean, sum, stddev, min, max, median</a></h4><!-- RDLabel: "mean, sum, stddev, min, max, median" -->
|
|
527
|
+
<h3><a name="label-57" id="label-57">Other instance methods</a></h3><!-- RDLabel: "Other instance methods" -->
|
|
528
|
+
<p>These methods returns a NArray (not a GPhys).</p>
|
|
529
|
+
<h4><a name="label-58" id="label-58">all?, any?, none?, where, where2, floor, ceil, round, to_f, to_i, to_a</a></h4><!-- RDLabel: "all?, any?, none?, where, where2, floor, ceil, round, to_f, to_i, to_a" -->
|
|
530
|
+
|
|
531
|
+
</body>
|
|
532
|
+
</html>
|