gphys 1.1.1a

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  1. data/ChangeLog +1777 -0
  2. data/LICENSE.txt +34 -0
  3. data/README +33 -0
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  5. data/TODO_ep_flux +6 -0
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  332. data/doc/gpmaxmin.html +31 -0
  333. data/doc/gpprint.html +34 -0
  334. data/doc/gpview.html +270 -0
  335. data/doc/grads2nc_with_gphys.html +21 -0
  336. data/doc/grads_gridded.html +307 -0
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  338. data/doc/grid.html +212 -0
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  341. data/doc/netcdf_convention.html +136 -0
  342. data/doc/unumeric.html +176 -0
  343. data/doc/update +64 -0
  344. data/doc/varray.html +299 -0
  345. data/doc/varraycomposite.html +67 -0
  346. data/ext_coord.c +209 -0
  347. data/ext_init.c +7 -0
  348. data/extconf.rb +42 -0
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  352. data/lib/numru/dclext_datetime_ax.rb +220 -0
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  355. data/lib/numru/ganalysis/eof.rb +298 -0
  356. data/lib/numru/ganalysis/histogram.rb +252 -0
  357. data/lib/numru/ganalysis/met.rb +317 -0
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  359. data/lib/numru/ganalysis.rb +7 -0
  360. data/lib/numru/gdir.rb +1038 -0
  361. data/lib/numru/gdir_connect_ftp-like.rb +149 -0
  362. data/lib/numru/ggraph.rb +5838 -0
  363. data/lib/numru/ggraph_on_merdional_section.rb +178 -0
  364. data/lib/numru/gphys/assoccoords.rb +359 -0
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  366. data/lib/numru/gphys/attributenetcdf.rb +80 -0
  367. data/lib/numru/gphys/axis.rb +963 -0
  368. data/lib/numru/gphys/coordmapping.rb +286 -0
  369. data/lib/numru/gphys/coordtransform.rb +209 -0
  370. data/lib/numru/gphys/derivative.rb +314 -0
  371. data/lib/numru/gphys/ep_flux.rb +868 -0
  372. data/lib/numru/gphys/gpcommon.rb +52 -0
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  385. data/lib/numru/gphys/grib_params.rb +1465 -0
  386. data/lib/numru/gphys/grid.rb +723 -0
  387. data/lib/numru/gphys/gtool3.rb +771 -0
  388. data/lib/numru/gphys/interpolate.rb +854 -0
  389. data/lib/numru/gphys/narray_ext.rb +34 -0
  390. data/lib/numru/gphys/netcdf_convention.rb +406 -0
  391. data/lib/numru/gphys/subsetmapping.rb +332 -0
  392. data/lib/numru/gphys/unumeric.rb +522 -0
  393. data/lib/numru/gphys/varray.rb +1109 -0
  394. data/lib/numru/gphys/varraycomposite.rb +415 -0
  395. data/lib/numru/gphys/varraygrads.rb +225 -0
  396. data/lib/numru/gphys/varraygrib.rb +177 -0
  397. data/lib/numru/gphys/varraygtool3.rb +226 -0
  398. data/lib/numru/gphys/varrayhdfeos5.rb +451 -0
  399. data/lib/numru/gphys/varraynetcdf.rb +350 -0
  400. data/lib/numru/gphys/varraynusdas.rb +59 -0
  401. data/lib/numru/gphys.rb +9 -0
  402. data/lib/numru/htdir.rb +170 -0
  403. data/multibitIO.c +567 -0
  404. data/sample/cira86_to_nc.rb +122 -0
  405. data/sample/druby_cli1.rb +21 -0
  406. data/sample/druby_cli2.rb +34 -0
  407. data/sample/druby_serv1.rb +30 -0
  408. data/sample/druby_serv2.rb +64 -0
  409. data/sample/ep_flux/demo_NCEP_1.rb +48 -0
  410. data/sample/ep_flux/demo_NCEP_2.rb +57 -0
  411. data/sample/ep_flux/demo_NCEP_3.rb +81 -0
  412. data/sample/ggraph_latlon_labelling_dr002690.rb +159 -0
  413. data/sample/ggraph_mapfit-axes_dr002687.rb +131 -0
  414. data/sample/map_projection.rb +121 -0
  415. data/sample/ncep_theta_coord.rb +79 -0
  416. data/test/eof_slp.rb +28 -0
  417. data/test/mltbit.dat +0 -0
  418. data/test/test_ep_flux.rb +533 -0
  419. data/test/test_multibitIO.rb +19 -0
  420. data/testdata/T.jan.ctl +12 -0
  421. data/testdata/T.jan.dat +0 -0
  422. data/testdata/T.jan.grib +0 -0
  423. data/testdata/T.jan.nc +0 -0
  424. data/testdata/T.jan.packed.withmiss.nc +0 -0
  425. data/testdata/UV.jan.nc +0 -0
  426. data/testdata/assoc_crds.nc +0 -0
  427. data/testdata/cira86.dat +1332 -0
  428. metadata +621 -0
data/ChangeLog ADDED
@@ -0,0 +1,1777 @@
1
+ Mon Aug 15 2011 T Horinouchi
2
+ * gphys-1.1.1 released (cvs tag gphys-1_1_1)
3
+ Thu Aug 11 2011 T Horinouchi
4
+ * LICENCE.txt: Added (BSD 2-clause licence)
5
+ * lib/numru/ggraph.rb: added a method linear_reg_slope_error.
6
+ --- It may not be a good choice to define this method
7
+ here. It is placed here just because it is related with
8
+ the linear_regression method called in regression_line.
9
+ In future, methods like this can be moved to another
10
+ module, so to document it is deliberately avoided.
11
+ Sat Jul 29 2011 S Takehiro
12
+ * bin/gpview: option --clrmap fixed.
13
+ Thu Jul 14 2011 S Otsuka
14
+ * lib/numru/gphys/gphys_nusdas_io.rb: Bug fix for assoc_coords.
15
+ Fri Jun 24 2011 S Otsuka
16
+ * lib/numru/gphys/gphys_netcdf_io.rb: when variable name is included in
17
+ the assoc_coord_names, assoc_coords should not be set.
18
+ Thu Jun 23 2011 T Horinouchi
19
+ * lib/numru/ggraph.rb: added new options ux_unit and uy_unit,
20
+ which specify unit vector lengths
21
+ Tue Jun 7 2011 T Horinouchi
22
+ * lib/numru/ganalysis/planet.rb : Added a new method grad_s
23
+ Tue Jun 7 2011 T Horinouchi < R Mizuta (jun 3)
24
+ * lib/numru/gphys/subsetmapping.rb: bug fix (l.234)
25
+
26
+ Wed May 11 2011 S Otsuka
27
+ * multibitIO.c: StringValueCStr in rb_str_to_uint*
28
+ is substituded by StringValuePtr to avoid an error message.
29
+ * lib/numru/gphys/grib.rb: When data were stored from north to south
30
+ or from east to west, the axes were inconsistent with the data.
31
+ Tue Apr 19 2011 S Otsuka
32
+ * lib/numru/ganalysis/histogram.rb: Minimum number of nbins
33
+ is increased from 1 to 10 when not specified.
34
+ Sat Mar 19 2011 T Horinouchi
35
+ * lib/numru/ganalysis/eof.rb: Updated an error message
36
+ Fri Mar 18 2011 T Horinouchi
37
+ * ggraph.rb: Added a method regression_line.
38
+ (((CAUTION: This will fully work in combination with a future
39
+ NArrayMiss version newer than 1.2.1. Currently,
40
+ to feed it data with missing will cause an error.)))
41
+
42
+ Tue Mar 15 2011 T Horinouchi
43
+ * lib/numru/gphys/gphys_fft.rb: a refactoring to deal with
44
+ a syntax change (or a BUG??) in Ruby 1.9.2 (compared with
45
+ Ruby 1.8) regarding multiple assignments in one line
46
+ using the "[]=" method.
47
+
48
+ Fri Feb 25 2011 T Horinouchi
49
+ * gphys-1.1.0 released (cvs tag gphys-1_1_0)
50
+ * lib/numru/gphys/unumeric.rb: added treatment for
51
+ two- and one-digit years: to always interpret them as
52
+ 00\d\d etc., not 20\d\d or 19\d\d (as in Date of Ruby 1.9),
53
+ regardless Ruby versions.
54
+ * documents updated.
55
+ Tue Feb 22 2011 T Koshiro
56
+ * multibitIO.c: ruby 1.9.2 compatibility
57
+ Mon Feb 21 2011 T Koshiro
58
+ * ggraph.rb: Added an option 'tonb' to GGraph.tone
59
+ Thu Feb 17 2011 T Horinouchi
60
+ * lib/numru/ganalysis/met.rb : Added an RDoc documentation.
61
+ Sat Feb 12 2011 T Horinouchi
62
+ * added new files lib/numru/ganalysis/planet.rb
63
+ and lib/numru/ganalysis/met.rb (created in Jan, actually).
64
+ * They define modules NumRu::GAnalysis::Planet and
65
+ NumRu::GAnalysis::Met, unlike other files in GAnalysis
66
+ that define module functions directory under GAnalysis.
67
+ * So far, these modules have only limited capabilities.
68
+ (lead by my own necessity)
69
+ * lib/numru/ganalysis.rb: modified to require these files.
70
+ Wed Jan 19 2011 T Horinouchi
71
+ * interpo.c: debug to prevent invalid array access
72
+ Tue Jan 18 2011 T Horinouchi
73
+ * lib/numru/gphys/assoccoords.rb: added attr_reader :axlens.
74
+ Introduced legnth consistency check in the constructor.
75
+ * lib/numru/gphys/grid.rb: Grid#set_assoc_coords: Added
76
+ legnth consistency check.
77
+ Mon Jan 17 2011 T Horinouchi
78
+ * lib/numru/derivative.rb: Supported cyclic extension etc.
79
+ * lib/numru/gphys/derivative.rb: Supported cyclic extension etc
80
+ (with an option to automatically judge whether cyclic).
81
+ Unified codes of cderiv and threepoint_O2nd_deriv.
82
+ Added a new optional argument 'altcoord' to them.
83
+ * lib/numru/gphys/varray.rb: add a method axis_cyclic_extendible?
84
+ * lib/numru/gphys/axis.rb: add a method cyclic_extendible?
85
+ Mon Jan 17 2011 T Horinouchi
86
+ * lib/numru/ggraph.rb: added a new option map_rsat to the fig
87
+ method. This parameter sets RSAT of DCL's SGPPACK for itr==30.
88
+ * lib/numru/gphys/gphys_fft.rb: made new methods:
89
+ phase_velocity_filter, phase_velocity_binning, and
90
+ phase_velocity_binning_iso_norml.
91
+ Fri Jan 14 2011 S Takehiro < T Tanigawa
92
+ * bin/gpview: option --operation implemented
93
+ Thu Jan 13 2011 S Otsuka
94
+ * lib/numru/gphys/gphys_nusdas_io.rb: z* levels are computed
95
+ and added to assoc_coords
96
+ Wed Oct 6 2010 S Nishizawa
97
+ * lib/numru/ganalysis/eof.rb: changed to sort eof modes with eigen value when GSL is used
98
+ Wed Oct 6 2010 S Nishizawa
99
+ * lib/numru/ganalysis/eof.rb: added rdoc document for #eof method
100
+ Tue Oct 5 2010 S Otsuka
101
+ * lib/numru/ganalysis/covariance.rb: missing value was not correctly treated.
102
+ * lib/numru/ggraph.rb: the function to display EOF modes is moved to
103
+ a new method add_mode_vectors.
104
+ Tue Oct 5 2010 T Horinouchi
105
+ * lib/numru/gphys/gphys.rb: added methods set_lost_axes
106
+ and add_lost_axes, which are redirected to @grid.
107
+ * interpolate.rb: to inherit the lost_axes info
108
+ * lib/numru/ggraph.rb:
109
+ * test part : added a sample plot of color_scatter;
110
+ changed to show page numbers
111
+ * GGraph::scatter, GGraph::color_scatter : modified
112
+ not to loose the lost_axes info.
113
+ Mon Oct 4 2010 S Otsuka
114
+ * lib/numru/ganalysis/eof.rb: a new function eof2 is added.
115
+ Mon Oct 4 2010 T Horinouchi
116
+ * lib/numru/ggraph.rb: added sample plots of GGraph::scatter
117
+
118
+ Mon Sep 13 2010 S Otsuka
119
+ * lib/numru/ggraph.rb: scatter / color_scatter are modified
120
+ to use all elements in gphys objects (not the first 1D).
121
+ color_scatter is modified to use DCL::uemrkz.
122
+ Additional functions (displaying EOF modes and
123
+ correlation coefficient) for scatter / color_scatter are
124
+ copied from the scatter method in Gfdnavi (experimental).
125
+ * lib/numru/ganalysis/covariance.rb: a typo is fixed.
126
+ * README: the install guide is updated.
127
+ Tue Sep 7 2010 T Horinouchi
128
+ * doc/: updated
129
+ * lib/numru/ggraph.rb: document updated
130
+ Mon Sep 6 2010 S Otsuka
131
+ * lib/numru/gphys/gphys_io_common.rb: fix a
132
+ bug in each_along_dims_write which occurs when
133
+ more than two files are specified for output.
134
+ Wed Aug 4 2010 T Horinouchi
135
+ * lib/numru/gphys/unumeric.rb: added class methods
136
+ supported_calendar? and supported_calendars
137
+ * lib/numru/ggraph.rb: not to show calendar-based axes
138
+ if the time variable has the attribute "calendar"
139
+ and its value is not suppored in UNumeric.
140
+ Wed Aug 4 2010 T Horinouchi
141
+ * lib/numru/gphys/unumeric.rb: UNumeric#to_datetime,
142
+ UNumeric::from_date: changed to return nil, rather
143
+ than to raise an exception, if the calendar speficied is
144
+ not supported
145
+ * lib/numru/gphys/axis.rb: Axis#[]:
146
+ to handle nil from UNumeric#to_datetime when @@humane_message
147
+ * lib/numru/gphys/gtool3.rb: Gtool3#interpret_time_axis:
148
+ to handle nil from UNumeric#to_datetime
149
+ Mon Aug 2 2010 T Horinouchi
150
+ * lib/numru/gphys/unumeric.rb: added "gregorian" and "standard"
151
+ as synonims of the default calendar (case when nil -->
152
+ case when nil, "gregorian", "standard").
153
+ Tue Jul 27 2010 T Horinouchi
154
+ * lib/numru/gphys/unumeric.rb : correction for Ruby 1.9:
155
+ to deal with a new feature of DateTime#parse, which interprets
156
+ 1- or 2-digit years (e.g. 1, 02) as in 2000's (e.g., 2001, 2002
157
+ -- In Ruby 1.8, these were simply interpreted as years
158
+ 1 and 2, which is the behavior we need.)
159
+ Wed Jul 21 2010 S Nishizawa
160
+ * lib/numru/ganalysis/eof.rb
161
+ * changes for update of ruby-lapack
162
+ * change options
163
+ Fri Jul 16 2010 Y SASAKI
164
+ * bin/gpview, bin/gpvect: add option "--clrmap" to select
165
+ colormap.
166
+ Mon Jun 28 2010 T Horinouchi
167
+ * interpo.c: debug -- multi-dimensional 1D interpolation.
168
+ * interpo_find_loc_1D_MD: for dimc < rank-1
169
+ * interpo_do: index counting for mtyp>=3
170
+ Tue May 18 2010 S Otsuka
171
+ * lib/numru/ganalysis/histogram.rb : Some parameters added
172
+ for 1D histogram.
173
+ Mon May 17 2010 T Horinouchi
174
+ * lib/numru/gphys/assoccoords.rb : slight change to suppress
175
+ a warning in a (sub?) version of ruby 1.8.7
176
+ Wed Apr 21 2010 T Horinouchi
177
+ * interpo.c: made "find loc" methods available outside GPhys as
178
+ class methods (interpo_find_loc_1D, interpo_find_loc_1D_MD).
179
+ Sun Apr 04 2010 S Nishizawa
180
+ * multibitIO.c : add String#to_uint{1,2,3} methods
181
+ * lib/numru/gphys/grib.rb : change to use String#to_uint{1,2,3}
182
+ Wed Mar 31 2010 S Nishizawa
183
+ * multibitIO.c
184
+ * raise exception when input file name is invalid
185
+ * fix memory leak
186
+ * lib/numru/gphys/grib.rb : changed to use MultibitIO
187
+ Wed Mar 31 2010 T Horinouchi
188
+ * multibitIO.c : changed: module MultibitIO -> class MultibitIO
189
+ * test/test_multibitIO.rb : changed accordingly
190
+ Tue Mar 30 2010 T Horinouchi
191
+ * multibitIO.c : newly added. IO of multibit numbers. Defines
192
+ a module MultibitIO and its module function read2D.
193
+ * test/test_multibitIO.rb : a sample source to use MultibitIO
194
+ * test/mltbit.dat : test data used by test_multibitIO.rb
195
+ * ext_init.c : updated to the initializer in multibitIO.c
196
+ Thu Mar 26 2010 T Horinouchi
197
+ * lib/numru/gphys/grib.rb: changed the type of narray to read
198
+ in: float (=double) -> sfloat
199
+ Sat Mar 20 2010 S Nishizawa
200
+ * lib/numru/gphys.grib.rb: modification for efficiency
201
+ Thu Mar 16 2010 S Nishizawa
202
+ * lib/numru/gphys/grib.rb: "hoge".hex to 0xhoge
203
+ * lib/numru/gphys/grib_params.rb: add variable of VBDSF (No.166) to the JMA table
204
+ Mon Mar 15 2010 T Horinouchi
205
+ * lib/numru/gphys/grib.rb: update for Ruby 1.9
206
+ (in response to a change in String#[])
207
+ Fri Feb 26 2010 S Otsuka
208
+ * lib/numru/ggraph.rb: bugfix on options in tone_and_contour
209
+ Mon Feb 21 2010 T Horinouchi
210
+ * gphys-1.0.0 re-released (sory about that)
211
+ * install.rb added again after removal
212
+ Fri Feb 19 2010 T Horinouchi
213
+ * gphys-1.0.0 released (cvs tag gphys-1_0_0)
214
+ Fri Feb 19 2010 R Mizuta
215
+ * lib/numru/gphys/grads_gridded.rb: speed up of reading file
216
+ Fri Feb 19 2010 T Horinouchi
217
+ * lib/numru/gphys/gphys.rb : added a new method GPhys#eddy
218
+ (which must have been frequently defined by users :-p )
219
+ * install.rb : removed from repository
220
+ * lib/numru/interpolate.rb: cleaned up (removed unnecesary comment-
221
+ outs)
222
+ Thu Feb 18 2010 T Horinouchi
223
+ * lib/numru/interpolate.rb: GPhys#interpolate supported data missing
224
+ * interpo.c: interpo_do (c_interpo_do) supported data missing
225
+ Thu Feb 18 2010 T Horinouchi
226
+ * lib/numru/interpolate.rb:
227
+ * added a new method GPhys#regrid
228
+ * GPhys#interpolate: supported conversion of coordinate units
229
+ Thu Feb 18 2010 T Horinouchi
230
+ * lib/numru/gphys/varraycomposite.rb : VArrayComposite#val changed
231
+ not to depend on ntype
232
+ * lib/numru/gphys/gphys.rb : GPhys.each_along_dims changed
233
+ not to depend on ntype
234
+ * lib/numru/ggraph.rb: GGraph::level_chval_fmt improved judgement
235
+ of least_order
236
+ Thu Feb 11 2010 T Horinouchi
237
+ * lib/numru/interpolate.rb: very minor change
238
+ Wed Feb 10 2010 T Horinouchi
239
+ * lib/numru/gphys/assoccoords.rb : minor change in AssocCoords#merge
240
+ Fri Feb 5 2010 T Horinouchi
241
+ * sample/ncep_theta_coord.rb : [newly added] a sample
242
+ of GPhys#interpolate
243
+ * lib/numru/dcl_mouse.rb: [newly added] defines classes
244
+ DCLMousePt and DCLMouseLine to capture mouse click on
245
+ the DCL viewport.
246
+ * lib/numru/interpolate.rb:
247
+ * added new methods GPhys#mouse_cut GPhys#mouse_cut_repeat
248
+ * mouse_cut: makes a subset interactively by specifying
249
+ a (poly-)line on the DCL window
250
+ * mouse_cut_repeat: interpolation onto grid points
251
+ specified by the previous call of GPhys#mouse_cut
252
+ * minor change in dimension ordering.
253
+ * to accept values with missing (but data missing treatment
254
+ has not been supported -- currently just ignored).
255
+ * interpo.c: debug
256
+ * lib/numru/gphys/grid.rb: set_axis was changed to renew the axis name
257
+ Thu Feb 4 2010 T Horinouchi
258
+ * lib/numru/interpolate.rb, interpo.c: coverage broadened / debug
259
+ Mon Feb 1 2010 T Horinouchi
260
+ * lib/numru/interpolate.rb: [newly added] defines
261
+ a new method GPhys#interpolate in a separate file.
262
+ (Wide-purpose multi-dimensional linear interpolation)
263
+ * interpo.c: [newly added] C extension to support
264
+ GPhys#interpolate. This file provides only private methods.
265
+ * ext_init.c: Modfied to call the initiation method in
266
+ interpo.c.
267
+ * lib/numru/gphys.rb: Modified to require numru/gphys/interpolate;
268
+ Also, to require numru/gphys_ext is made mandatory (from optional).
269
+
270
+ Fri Jan 29 2010 T Horinouchi
271
+ * lib/numru/grid.rb: added a new method coord_dim_indices
272
+ (test part is written in lib/numru/assoccoords.rb)
273
+
274
+ Wed Jan 13 2010 T Horinouchi
275
+ * lib/numru/ggraph.rb: added a new method color_scatter
276
+ (to draw a scatter diagram colored by values)
277
+
278
+ Tue Jan 05 2010 T Horinouchi
279
+ * lib/numru/ggraph.rb: added a new method scatter
280
+ (to draw a scatter diagram)
281
+
282
+ Wed Sep 30 2009 S Takehiro
283
+ * bin/gpvect: option --nocolorbar and --nozero added.
284
+ Fri Aug 7 2009 M Horikawa
285
+ * lib/numru/gphys/gphys_hdfeos5_io.rb: _sw_open bug fix
286
+ * lib/numru/ggraph.rb: profile,timeplot were modified.
287
+ Wed Jul 29 2009 S Otsuka
288
+ * lib/numru/gphys/grads_gridded.rb: bug fix (the previous version could not interpret a specific expression of TDEF in GrADS ctl such as 12Z30APR2008)
289
+
290
+ Mon Jul 27 2009 T Koshiro
291
+ * lib/numru/ggraph.rb: DCLExt.color_bar
292
+ * added a new option "inffact": to specify the factor to change the
293
+ length of triangle on the side for infinity (relative to 'vwidth').
294
+ * added a new option "units_voff" and "title_voff": to specify the
295
+ offset value from the default position in the V coordinate.
296
+ * changed default position of units and default character size of
297
+ title.
298
+ * bug fix for "log"=>true.
299
+
300
+ Wed Jul 22 2009 S Otsuka
301
+ * lib/numru/gphys/gphys_nusdas_io.rb: bug fix
302
+
303
+ Wed Jul 8 2009 T Koshiro
304
+ * lib/numru/ggraph.rb: GGraph::axes
305
+ options "xmaplabel","ymaplabel": default values are changed
306
+
307
+ Thu Jul 2 2009 T Horinouchi
308
+ * gphys-0.7.0 re-released (cvs tag gphys-0_7_0)
309
+ * lib/numru/gphys/narray_ext.rb : _dump / _load implementation
310
+ was modified.
311
+ Thu Jul 2 2009 T Horinouchi
312
+ * gphys-0.7.0 released (cvs tag gphys-0_7_0)
313
+ * lib/numru/gphys/gphys.rb : made the #marshal_load and
314
+ #marshal_dump methods public. Added test code of them
315
+ * lib/numru/gphys/narray_ext.rb : Newly created. To support
316
+ marshaling.
317
+
318
+ Thu Jul 2 2009 S Nishizawa
319
+ * lib/numru/gphys/gphys.rb : add #marshal_load and #marshal_dump methods
320
+
321
+ Thu Jul 2 2009 T Horinouchi
322
+ * lib/numru/vizshot.rb : removed (moved into the new
323
+ project gfdnavi_utils)
324
+
325
+ Wed Jul 1 2009 T Horinouchi
326
+ * lib/numru/gphys/gtoo3.rb, varraygtool3.rb : minor bug fix
327
+ * lib/numru/ggraph.rb : added the "auto" option to GGraph::tone
328
+ * lib/numru/gphys.rb : to require "gphys_ext" if installed
329
+
330
+ Mon May 18 2009 S Otsuka
331
+ * lib/numru/gphys/varraynetcdf.rb:
332
+ a bug fix to prevent endless loop
333
+
334
+ Wed May 6 2009 R Mizuta
335
+ * lib/numru/gphys/grads_gridded.rb:
336
+ tentatibe support for "pdef"
337
+ Tue Apr 28 2009 A tomobayashi
338
+ * lib/numru/gphys/gphys_hdfeos5_io.rb:
339
+ enable to read Zonal Average structure.
340
+ * lib/numru/gphys/varrayhdfeos5.rb:
341
+ make a new class "VArrayHE5ZaField".
342
+
343
+ Mon Apr 27 2009 T Horinouchi
344
+ * lib/numru/gphys/gphys_io.rb: added a new method
345
+ GPhys::IO.str2gphys.
346
+ * lib/numru/ggraph.rb:
347
+ * ggraph methods (contour etc): enhanced to accept strings
348
+ to specify a GPhys -- Longer need to call GPhys::IO.open
349
+ in advance
350
+ * ggraph methods (contour etc): added new options "slice",
351
+ "cut", and "mean" -- this is to supplement the enhancement
352
+ above. Also, one can unify subsetting calls for the 2
353
+ vector components.
354
+ * eliminated unsed options (don't know why they are introduced)
355
+ * tone: added the "color_bar" option for quick look.
356
+ -- for full control, you should still use GGraph.color_bar
357
+ separately.
358
+
359
+ Mon Apr 27 2009 T Horinouchi
360
+ * Added a gtool3 support
361
+ * Added files: gtool3.rb, gphys_gtool3_io.rb, gphys_gtool3_io.rb
362
+ (in lib/numru/gphys/)
363
+ * Note: gtool3.rb is in pure Ruby. Though it's reasonably
364
+ fast, in future I would like to have a C-extension
365
+ library that generally handles regularly structured
366
+ binary files (incl. fortran unformatted files)
367
+ as a common low-level library for GrADS, GRIB, etc.
368
+ * lib/numru/gphys/gphys_io.rb: added the Gtool3 support.
369
+
370
+ Mon Apr 23 2009 A tomobayashi
371
+ * lib/numru/gphys/gphys_hdfeos5_io.rb:
372
+ * remove "Regexp" from error message in __interpret_files method.
373
+ Mon Apr 23 2009 A tomobayashi
374
+ * lib/numru/gphys/varrayhdfeos5.rb:
375
+ * replace get_att_names method to att_names.
376
+ Mon Apr 20 2009 A tomobayashi
377
+ * lib/numru/gphys/gphys_hdfeos5_io.rb:
378
+ * corrected an error message for truely multidimensional longitudes/latitudes.
379
+ * has_swath? and has_grid? methods come to be used again.
380
+ Thu Apr 16 2009 A tomobayashi
381
+ * lib/numru/gphys/gphys_hdfeos5_io.rb:
382
+ corrected how to select variables for making axes in reading grid structure.
383
+ Mon Apr 13 2009 T Horinouchi
384
+ * lib/numru/gphys/attribute.rb: made the methods merge and update
385
+ public
386
+ * lib/numru/gphys/varray.rb, lib/numru/gphys/varraycomposite.rb
387
+ * debug : TypeErroor --> TypeError in a raise call
388
+ (varray.rb)
389
+ * minor change in a private method __ntype (to take typecode
390
+ directly as the argument rather than to call arg.typpecode
391
+ inside) (varray.rb, varraycomposite.rb)
392
+ Tue Apr 7 2009 A Tomobayashi
393
+ * lib/numru/gphys/gphys_hdfeos5_io.rb:
394
+ enable to read Grid structure.
395
+ * lib/numru/gphys/varrayhdfeos5.rb:
396
+ make a new class "VArrayHE5GdField".
397
+ Thu Mar 6 2009 M Horikawa
398
+ * changed struct HE5SwField (VALUE file -> VALUE swath)
399
+ Tue Jan 20 2009 R Mizuta
400
+ * lib/numru/gphys/axis.rb, unumeric.rb, grads_gridded.rb:
401
+ support 365_day calendar (i.e. no leap year) for NetCDF and GrADS
402
+ * lib/numru/ggraph.rb:
403
+ support 365_day calendar for time axis
404
+ Sun Dec 14 2008 S Takehiro
405
+ * bin/gpview: --mark option implemented
406
+ Fri Aug 01 2008 S Otsuka
407
+ * lib/numru/ggraph.rb: ruby 1.9 compatibility
408
+ Mon Jul 14 2008 T Horinouchi
409
+ * lib/numru/gphys/varrayhdfeos5.rb: to use HE5SwField#get_att
410
+ instead of HE5SwField#att (which was deprecated).
411
+ Thu Jul 17 2008 S Otsuka
412
+ * extconf.rb: code for cygwin added.
413
+ Thu Jul 17 2008 S Otsuka
414
+ * lib/numru/gphys/attribute.rb: ruby 1.9 compatibility
415
+ Mon Jul 14 2008 T Horinouchi
416
+ * lib/numru/ggraph.rb: definition of @@[line|mark|vector]_options
417
+ were moved outside the [line|mark|vector] methods.
418
+ * lib/numru/gphys/gphys_hdfeos5_io.rb:
419
+ * HE5_IO::open (actually HE5_IO::_sw_open) was modified
420
+ to use AssocCoords
421
+ * lib/numru/gphys/grid.rb:
422
+ * deprecated unused methods
423
+ exclude, change_axis!, insert_axis, insert_axis!
424
+ * added assoc coord support to Grid#transpose
425
+ Grid#change_axis, Grid#delete_axes
426
+ * lib/numru/gphys/assoccoords.rb: addde a new method
427
+ AssocCoords#subset_having_axnames
428
+ Mon Jul 14 2008 T Horinouchi
429
+ * lib/numru/gphys/grid.rb: added Grid#cut_assoccoord
430
+ * lib/numru/gphys/gphys.rb: GPhys#cut : support assoc coords --
431
+ when the argument is a Hash, one can specify associated
432
+ coordinates as well as the regular axes.
433
+ * lib/numru/gphys/assoccoords.rb: addition was made to the test part
434
+ * lib/numru/ggraph.rb: addition was made to the test part
435
+ Sat Jul 12 2008 T Horinouchi
436
+ * lib/numru/gphys/varrayhdfeos5.rb : VArrayHE5SwField#shape
437
+ was improved in response to the debug of ruby-hdfeos5
438
+ Sat Jul 12 2008 T Horinouchi
439
+ * lib/numru/gphys/netcdf_convention.rb : started CF convention
440
+ support, which is set to be the default convention.
441
+ * lib/numru/gphys/gphys_netcdf_io.rb : supported assoc coords
442
+ * lib/numru/gphys/grid.rb,lib/numru/gphys/gphys.rb : minor update
443
+ * lib/numru/gphys/assoccoords.rb: added some methods
444
+ * testdata/assoc_crds.nc : added (renamed output from
445
+ assoccoords.rb)
446
+ Sat Jul 12 2008 T Horinouchi
447
+ * lib/numru/ggraph.rb:
448
+ * Refactoring of GGraph::vector :
449
+ shortened by using axes_or_map_and_ttl.
450
+ * introduced data_prep_2D and data_prep_1D to do common
451
+ works in graphic methods.
452
+ * Many changes to support itr==51
453
+ Fri Jul 11 2008 T Horinouchi
454
+ * lib/numru/gphys/grid.rb:
455
+ * to use AssocCoords, along with many new methods such as
456
+ set_assoc_coords
457
+ * made Grid#coord
458
+ * lib/numru/gphys/gphys.rb:
459
+ * GPhys#coord was changed to simply use Grid#coord
460
+ * made many methods to be forwared to the new methods of Grid
461
+ * Changed GPhys#grid to be public (it has been protected),
462
+ since a grid is not just a container of axes any more.
463
+ But forwarding will be continued. So basically,
464
+ it would not be needed to use it.
465
+ * lib/numru/gphys/assoccoords.rb: test part enhanced, etc
466
+
467
+ Fri Jul 4 2008 T Horinouchi
468
+ * lib/numru/gphys/assoccoords.rb: created -- to support "assocated
469
+ coordinates", which can be multi-dimensional.
470
+ * extconf.rb: created
471
+ * ext_coord.c: created -- extension library to speed up coordinate handling
472
+ * ext_init.c: created -- just a starter of extention libraries
473
+
474
+ Wed Jul 2 2008 T Horinouchi
475
+ * lib/numru/gphys/gphys_hdfeos5_io.rb:
476
+ * Introduced PredefCoordNames, from which GPhys::HE5_IO::open
477
+ select coordinate variables if found. Also, it was
478
+ changed to look for 1D data fields if no geolocation
479
+ field for a dimension is found.
480
+ * Changed according to the recent change in hdfeos5.rb
481
+ (HE5SwField#dim_names was reversed)
482
+ Tue Jul 1 2008 T Horinouchi
483
+ * lib/numru/gphys/varrayhdfeos5.rb: Changed not to do buffering --
484
+ This part was for NetCDF, which has the define mode and
485
+ the data mode. I do not know whether a similar buffering
486
+ would be desirable or not.
487
+ * lib/numru/gphys/gphys_hdfeos5_io.rb:
488
+ * A minor refactoring of IO::write
489
+ * Edited the test part at the bottom of the file
490
+ * Now it passes!
491
+ * But, actually, I have commented out a latter half of it.
492
+ Tue Jul 1 2008 T Horinouchi
493
+ * lib/numru/gphys/gphys_hdfeos5_io.rb:
494
+ * Refactoring of HE5_IO::open -- the behavior should
495
+ be identical, but the source has got much shorter.
496
+ (This is to prepare for modification to improve.)
497
+ * Refactoring of HE5_IO::open : Division was made for
498
+ each grid type. Now the main part of the old open
499
+ is separated in the private method _sw_open
500
+ Tue Jul 1 2008 T Horinouchi
501
+ * lib/numru/gphys/gphys_hdfeos5_io.rb:
502
+ * change due to a debug of hdfeos5.rb (swath_names? --> swath_names)
503
+ * Changed the delimiter between swath names and variable names
504
+ from "." to "/"
505
+ * lib/numru/gphys/gphys_io.rb:
506
+ * file2type : to support HE5Sw in addition to HE5
507
+ Tue Apr 22 2008 T Horinouchi
508
+ * gphys_io.rb: Changed to make the HDF-EOS5 support optional:
509
+ get around the load error of the HDF-EOS5 interface
510
+ (NumRu::HE5).
511
+ Tue Apr 22 2008 M Horikawa
512
+ * lib/numru/gphys/gphys_hdfeos5_io.rb: added for hdfeos5
513
+ * lib/numru/gphys/varrayhdfeos5.rb: added for hdfeos5
514
+ * lib/numru/gphys/gphys_io.rb: modified for hdfeos5
515
+ * lib/numru/ggraph.rb: added new methods profile, timeplot
516
+ modified @@contour_options, @@tone_options
517
+ * lib/numru/vizshot.rb: added new methods profile, timeplot
518
+ Fri Apr 4 2008 T Horinouchi
519
+ * updated doc/
520
+ Thu Feb 14 2008 S Takehiro
521
+ * bin/gpview: option --nocolorbar and --nozero added.
522
+
523
+ Thu Mar 1 2008 T Horinouchi
524
+ * gphys-0.6.1 released (cvs tag gphys-0_6_1)
525
+ Sun Feb 24 2008 S Otsuka
526
+ * lib/numru/gphys/grads_gridded.rb: ruby 1.9 compatibility on windows
527
+ Thu Feb 14 2008 S Takehiro
528
+ * gphys_io.rb: parse_gturl and open_gturl interpret position setting
529
+ as grid numbers rather than physical coordinates
530
+ when the position specifiers begin with "^".
531
+ * gpcommon.rb: copy_global_att can deal with GPhys
532
+ which consists of multiple files.
533
+ Tue Feb 12 2008 R Mizuta
534
+ * axis.rb: changes corresponding to the added methods in unumeric.rb
535
+ Tue Feb 12 2008 S Nishizawa
536
+ * grib.rb : minor change for better performance
537
+ * gphys_nusdas_io.rb : changes for new version of ruby-nusdas
538
+ Mon Feb 11 2008 T Horinouchi
539
+ * unumeric.rb : added a new class method UNumeric::from_date
540
+ and a method UNumeric#to_datetime. Changed UNumeric#strftime
541
+ to use UNumeric#to_datetime.
542
+ Mon Feb 11 2008 T Horinouchi < R Mizuta
543
+ * axis.rb: Axis#cut : to support Date and DateTime
544
+ Mon Feb 11 2008 T Horinouchi
545
+ commited the following changes, which haven't been commited yet
546
+ (latest changes in ggraph.rb were merged):
547
+ Wed Dec 26 2007 T Horinouchi
548
+ * lib/numru/ggraph.rb: GGraph::annotate : added new argument
549
+ noff (nil=default or Integer) to make it suitable to
550
+ consecutive (separate) calls
551
+ * axis.rb : added new class methods Axis.strftime_fmt= and
552
+ Axis.strftime_fmt to specify (or get) the format of strftime
553
+ used in Axis#[]
554
+ * unumeric.rb : added new method strftime.
555
+
556
+ Fri Feb 8 2008 S Otsuka
557
+ * install.rb: ruby 1.9 compatibility
558
+ * lib/numru/gphys/axis.rb: ruby 1.9 compatibility
559
+ * lib/numru/gphys/subsetmapping.rb: ruby 1.9 compatibility
560
+ * lib/numru/gphys/gphys_io.rb: ruby 1.9 compatibility
561
+ * lib/numru/gphys/varraycomposite.rb: ruby 1.9 compatibility
562
+ * lib/numru/gphys/grib.rb: ruby 1.9 compatibility
563
+ Fri Feb 8 2008 T Koshiro
564
+ * ggraph.rb: DCLExt.color_bar: bug fix for drawing bar frame
565
+ Fri Feb 8 2008 T Koshiro
566
+ * ggraph.rb: DCLExt.color_bar: added a new option "labels_ud":
567
+ to specify user-defined labels for replacing the default labels
568
+ (Array of String)
569
+ Thu Feb 7 2008 T Koshiro
570
+ * ggraph.rb: DCLExt.color_bar: added new options and fixed bugs.
571
+ * added new option: "title", "units", and "charindex"
572
+ * no tick lines are drawn if opt["tickintv"] == 0
573
+ * no labels are drawn if opt["labelintv"] == 0
574
+ * option "index" is validated for frame and tick lines regardless of opt["constwidth"] setting
575
+ * fixed the length of the color bar with opt["constwidth"] == true
576
+ * fixed other small bugs
577
+ Wed Jan 30 2008 R Mizuta
578
+ * grads_gridded.rb: bug fix for reading sequential binary file.
579
+ * varraygrads.rb: minor bug fix for writing control file.
580
+
581
+ Tue Dec 25 2007 T Horinouchi
582
+ * lib/numru/ggraph.rb: added new options.
583
+ * GGraph.fig: eqdistvpt, round0, round1
584
+ * GGraph.line, GGraph.mark: map_axes
585
+ * in doing so, introduced a new method axes_or_map_and_ttl,
586
+ which is now commonly called in contour, tone, mark & line.
587
+ Fri Dec 14 2007 S Nishizawa
588
+ * lib/numru/gphys/gphys_nusdas_io.rb: added for nusdas
589
+ * lib/numru/gphys/varraynusdas.rb: added for nusdas
590
+ * lib/numru/gphys/gphys_io.rb: modified for nusdas
591
+ Mon Dec 3 2007 T Horinouchi
592
+ * lib/numru/ggraph.rb: improvement in GGraph::fig: To avoid
593
+ the internally defined DCL window to have xmin==xmax or ymin==ymax.
594
+ * varray.rb: improvement for NArray_type3_methods : not to fail
595
+ if the result is nil.
596
+ Mon Dec 3 2007 T Horinouchi < S Nishizawa
597
+ * lib/numru/vizshot.rb: revised VizShot#plot not to fail with opendap
598
+ Tue Nov 27 2007 T Horinouchi
599
+ * lib/numru/vizshot.rb: supported extensions, thanks to S. Nishizawa
600
+ Tue Nov 27 2007 T Horinouchi
601
+ * gphys.rb: added a new method first3D
602
+
603
+ Thu Oct 25 2007 R Mizuta
604
+ * grads_gridded.rb: bug fix for template in the grads control file.
605
+ Tue Aug 28 2007 T Horinouchi < dennou-ruby:002830
606
+ * ggraph.rb: (debug) DCLExt.color_bar: to call DCL.uwsgxz(false)
607
+ and DCL.uwsgyz(false) after calling DCL::uwsgxa and DCL::uwsgya.
608
+ Thu Aug 16 2007 T Horinouchi
609
+ * gphys-0.6.0 released (cvs tag gphys-0_6_0)
610
+ Tue Aug 14 2007 T Horinouchi
611
+ * ggraph.rb: DCLExt::level_chval_fmt : improved the automatic
612
+ label-format determination algorithm for |dx|<1e-6
613
+ (essentially a debug).
614
+ Fri Jul 27 2007 T Horinouchi
615
+ * gdir.rb: fixed bugs in list_*_v when called with a path argument.
616
+ Thu Jul 26 2007 T Horinouchi
617
+ * gphys_netcdf_io.rb, gphys_io.rb: to make a record in the NetCDF
618
+ global attribute 'history' in each_along_dims_write. (Before that,
619
+ history recording is made only with the write method.)
620
+ Thu Jul 26 2007 T Horinouchi
621
+ * gphys_netcdf_io.rb: NetCDF_IO::write : changed to write command
622
+ name (File.basename($0)), rather than the method name, to the
623
+ global attribute 'history'.
624
+ Wed Jul 25 2007 T Horinouchi
625
+ * ggraph.rb: improved default color-bar labeling for log-scale:
626
+ to simply use chval format 'b', rather than using
627
+ level_chval_fmt, which is optimized for equal spacing.
628
+ * subsetmapping.rb: improved an error message.
629
+ Tue Jul 24 2007 T Horinouchi
630
+ * axis.rb: added a new class method Axis.humane_message=
631
+ to disable the humane messaging by [] (By defalut,
632
+ lost time axis info is expressed in a chronological
633
+ yyyy-mm-... form, which may be unwanted.)
634
+ * subsetmapping.rb: to use Array#values_at instead of
635
+ Array#indices, which is obsolete and warned in Ruby 1.8.
636
+ (note: Array#values_at is a ruby 1.8 feature.)
637
+ * varray.rb: VArray#val: to support negative array index
638
+ with step (by using Hash) for NArray-type data.
639
+ Wed Jul 18 2007 Y Morikawa
640
+ * bin/gpedit: Create or overwrite the attributes of a variable
641
+ specified by a gtool4-type URL (Only netCDF files are supported).
642
+ Tue Jul 17 2007 S Takehiro
643
+ * lib/numru/ggraph.rb: demo for GGraph::vector and 'flow_itr5' option
644
+ (vector filed plotting on the polar corrdinate) added.
645
+ Tue Jul 6 2007 S Takehiro
646
+ * lib/numru/ggraph.rb: optional branch position of 'flow_itr5' and
647
+ 'flow_vect' are exchanged in GGraph::vector.
648
+ In GGraph::title, action of the case of itr==5 changed.
649
+ In flow_itr5, unit_vector option is added.
650
+ * bin/gpvect: commnad for 2D vector field plotting, optionally with
651
+ contour/tone of scalar field newly created.
652
+ Thu Jul 5 2007 R Mizuta
653
+ * grads_gridded.rb: added support for template %m1,%d1,%h1,%h2,%n2
654
+ in the control file.
655
+ * lib/numru/dclext_datetime_ax.rb: bug fixed
656
+ (save and restore x/yfact, x/yoffset)
657
+ Tue Jul 4 2007 S Takehiro
658
+ * lib/numru/ggraph.rb: Added a new method DCLExt.flow_itr5 to draw
659
+ a 2D vector filed on the polor coordinate. GGraph::vector was
660
+ modified to call this method.
661
+ GGraph::vector is fixed to perform the axes exchange before
662
+ rank inquirey.
663
+ Tue Jun 26 2007 T Horinouchi
664
+ * lib/numru/vizshot.rb: Added a new tone_cont option
665
+ "color_bar_options", which takes options of
666
+ GGraph::color_bar as a Hash. To test it, try the test menu 6 by
667
+ % ruby vizshot.rb 6
668
+ Tue Jun 26 2007 T Horinouchi
669
+ * lib/numru/vizshot.rb: Added a logarithmic color-bar option:
670
+ * If a GGraph option 'log' is given to VizShot#tone_cont,
671
+ it was made to be passed to GGraph::color_bar in addition
672
+ to GGraph::tone etc.
673
+ (Therefore, at this moment, only the "log" option
674
+ of color_bar was supported. I'm also planning to
675
+ support any color_bar options.)
676
+
677
+ Mon Jun 25 2007 T Horinouchi
678
+ * axis.rb Axis#[]
679
+ * supported units compatible with "months" (e.g.
680
+ year, pentad) with since fields.
681
+ * debug and minor improvement of "day"-compatible
682
+ units (second,hour,...) with since fields,
683
+ which was supported on jun 21 2007.
684
+
685
+ Thu Jun 21 2007 T Horinouchi
686
+ * axis.rb Axis#[] : changed the lost-axis descripting
687
+ string, when the axis is a time one, whose units
688
+ has a "since" field. In that case, string to be returned
689
+ was changed to a date time in the form of
690
+ "%Y-%m-%d %M:%H:%S%z" (formatted by strftime).
691
+ Thu Jun 21 2007 R Mizuta
692
+ * grads_gridded.rb: error massage when ctl file and binary
693
+ are inconsistent.
694
+ Thu Jun 21 2007 T Horinouchi
695
+ * ggraph.rb: Added calendar-type time axis support.
696
+ * Added new option "time_ax" for GGraph::axes, where
697
+ * nil (defalut): Draws calendar-type time axis if
698
+ the unit of an axis is time one with the "since"
699
+ field (such as "hours since 2006-01-01").
700
+ Auto selects "h" or "ymd" below, depending on the
701
+ length of the period (current thres: 5 days).
702
+ * false: Do not use the time axis regardless the units
703
+ * 'h': When the units allow (see the description for nil),
704
+ always use the hour-resolving time axis datetime_ax
705
+ in dclext_datetime_ax.rb)
706
+ * 'ymd': When the units allow (see the description for nil),
707
+ always use the y-m-d type axis using DCL.uc[xy]acl.
708
+ Tue May 22 2007 T Horinouchi
709
+ * ggraph.rb: Added a new option 'keep' in GGraph::contour,
710
+ GGraph::tone, GGraph:vector (defalut val: false). If its value
711
+ is set true, the contour levels / tone levels & patterns /
712
+ vector scaling, respectively, are set to be the same
713
+ as in the previous call. GOOD FOR ANIMATION.
714
+ Also, a minor debug was made in contour -- handling of 'lmsg'
715
+ in log scaling.
716
+ Wed May 9 2007 T Horinouchi
717
+ * gphys.rb: GPhys#average etc (in Axis.defined_operations).
718
+ debug not to cause error when the result is scalar
719
+ (to return the scalar itself -- behavior unified with
720
+ mean etc)
721
+
722
+ Tue Apr 24 2007 T Horinouchi
723
+ * varray.rb: debug in replace_val (replace_val was not effective
724
+ for subset VArray); added explicit error for VArray subclasses
725
+ such as VArrayNetCDF.
726
+ * gphys_fft.rb: added the second argument replace_val to the class
727
+ method fft_ignore_missing
728
+ Fri Mar 16 2007 T Horinouchi
729
+ * axis.rb: debuged the error message string at l.646
730
+
731
+ Fri Feb 23 2007 T Horinouchi
732
+ * gphys-0.5.4 released (cvs tag gphys-0_5_4)
733
+
734
+ Mon Dec 12 2006 T Horinouchi
735
+ * gphys_fft.rb: added a class method fft_ignore_missing: this is
736
+ to set a flag (class variable) to ignore missing values.
737
+ This is for data that actually do not have missing
738
+ but is treated as potentially having missing (often
739
+ by having the valid_* attributes of NetCDF.)
740
+
741
+ Mon Dec 12 2006 T Horinouchi
742
+ * ggraph.rb:
743
+ * GGraph.tone,GGraph.contour: Added option 'log'
744
+ * DCLExt : added new method quasi_log_levels and quasi_log_levels_z
745
+ (driver of quasi_log_levels with data values)
746
+ Mon Dec 11 2006 T Horinouchi
747
+ * ggraph.rb: Added options 'legend' etc to GGraph.line and GGraph.mark
748
+ to annotate the line/mark type and index (and size if mark).
749
+ ('legend', 'legend_vx', 'legend_dx' (only for line), 'legend_vy',
750
+ 'legend_size') By defualt it is shown in the right margin of vpt.
751
+ 'legend' is a String to show, or true to show the name of the
752
+ current GPhys object.
753
+ * DCLExt : added new method legend
754
+ Fri Nov 24 2006 T Horinouchi
755
+ * lib/numru/vizshot.rb: debug to allow Regexp in :file & :file2
756
+ Wed Oct 11 2006 T Horinouchi
757
+ * ggraph.rb: added documentation for (next|set)_(contour|tone)
758
+ Wed Oct 11 2006 T Horinouchi
759
+ * gphys-0.5.3 released (cvs tag gphys-0_5_3)
760
+ Wed Oct 11 2006 T Horinouchi
761
+ * ggraph.rb: added new methods set_contour, next_contour,
762
+ set_tone, and next_tone
763
+ * lib/numru/vizshot.rb: added new methods set_contour and set_tone
764
+ Thu Sep 8 2006 T Horinouchi
765
+ * lib/numru/vizshot.rb: added new methods:
766
+ * VizShot#add : to add plots in another VizShot non-destructively
767
+ (also added are protected methods
768
+ semi_deep_clone, and plots (attr_reader))
769
+ Thu Aug 31 2006 T Horinouchi
770
+ * lib/numru/vizshot.rb <-- lib/numru/easyviz.rb : renamed
771
+ * changed argument spec in execute and (gen|dump)_code*
772
+ Thu Aug 31 2006 T Horinouchi
773
+ * lib/numru/easyviz.rb:
774
+ * added dump_code
775
+ * multiple frame support
776
+ * added replace_plot!
777
+ * support dump_code_and_data
778
+ * windows -> ms_windows etc
779
+ Wed Aug 30 2006 T Horinouchi
780
+ * lib/numru/easyviz.rb: added
781
+ * testdata/UV.jan.nc: added
782
+ Mon Aug 28 2006 T Horinouchi
783
+ * gphys-0.5.2 released (cvs tag gphys-0_5_2)
784
+ Wed Aug 23 2006 T Horinouchi < T Koshiro [dennou-ruby:002687 & 002690]
785
+ * ggraph.rb: Applied the patches made by T Koshiro;
786
+ * 002687: map-fitting (with option 'map_fit') and axes-drawing
787
+ (with option 'map_axes') were made available
788
+ simultaneously when itr=10.
789
+ * 002690: added axis-drwaing options: 'xmaplabel', 'ymaplabel'
790
+ better axis-labelling when itr==10, with 90E, 90W, etc instead
791
+ of 90, 270, etc.
792
+ * Added examples (graph 27-30) in the test part at the bottom.
793
+ * sample/ggraph_mapfit-axes_dr002687.rb: sample program by koshiro
794
+ * sample/ggraph_latlon_labelling_dr002690: sample program by koshiro
795
+ Tue Aug 15 2006 T Horinouchi (ref: [dennou-ruby:002682] from koshiro)
796
+ * sample/cira86_to_nc.rb: debug
797
+ * attribute.rb: better error message in Attribue#[]=
798
+ Tue Aug 15 2006 T Horinouchi (ref: [dennou-ruby:002681] from nishizawa)
799
+ * gphys.rb: GPhys#each_along_dims
800
+ * corrected to support NArrayMiss in addition to NArray
801
+ * the sencond argument is allowed to be an empy array, which
802
+ is a trivial case with no need for this method but
803
+ is supported for generality in terms of programming.
804
+ Tue Aug 15 2006 T Horinouchi
805
+ * grid.rb: corrected the document for Grid#cut
806
+ Mon Jul 31 2006 R Mizuta
807
+ * ggraph.rb: color_bar: support option 'chval_fmt' with using
808
+ option 'constwidth'.
809
+ Wed Jun 14 2006 T Horinouchi
810
+ * gphys.rb: replaced .is_a?(GPhys) with .respond_to?(:grid),
811
+ since it causes troubles in binary operations through dRuby.
812
+ Mon May 15 2006 S Nishizawa (logging forgotten; added by horinout on june 14)
813
+ * grib_params.rb, grib.rb: new parameters added...
814
+ Fri Mar 24 2006 T Horinouchi
815
+ * ggraph.rb: added option "no_new_fig" to GGraph::fig. (This made
816
+ possible to set DCL parameters that are reset by grfrm or grfig
817
+ such as the uspack parameters d[xy][tl])
818
+ Tue Mar 7 2006 S Takehiro < M Nakano
819
+ * bin/gpmaxmin: USAGE Typo fixed.
820
+ * bin/gpview: option --int bug fixed
821
+ Wed Dec 14 2005 T Horinouchi < T Koshiro
822
+ * lib/numru/ggraph.rb: debug in the method axes [dennou-ruby:002541]
823
+ Thu Nov 17 2005 T Horinouchi
824
+ * lib/numru/dclext_datetime_ax.rb: debug axis label direction recovery
825
+ Wed Nov 9 2005 R Mizuta
826
+ * grads_gridded.rb: support 'byteswapped' option,
827
+ become classes under NumRu module
828
+ Mon Nov 7 2005 R Mizuta
829
+ * grads_gridded.rb, gphys_grads_io.rb: debug in reading variables
830
+ with different number of vertical levels from ZDEF.
831
+ * grads_gridded.rb: minor modification in reading
832
+ Tue Oct 31 2005 S Takehiro
833
+ * bin/gpview: option --smooth bug fixed.
834
+ Tue Oct 30 2005 S Takehiro
835
+ * bin/gpview: --animate option recoverd.
836
+ Wed Oct 5 2005 T Horinouchi
837
+ * ggraph.rb: color_bar: enhancement (& debug) of the modification on
838
+ Sep 27 2005 to support trn > 5
839
+ Tue Sep 27 2005 T Horinouchi
840
+ * ggraph.rb: color_bar: to restore viewport, window, and trn at exit,
841
+ so that one can overlay plots after showing a color bar.
842
+ Mon Sep 26 2005 T Horinouchi
843
+ * ggraph.rb: color_bar added option 'chval_fmt' to override the
844
+ internal automatic setting.
845
+ * varray.rb: minor modification in binary operations for better
846
+ error messaging.
847
+ Tue Sep 13 2005 T Horinouchi
848
+ * lib/numru/dclext_datetime_ax.rb: added (it was developed
849
+ separately at ~/davis/WORK/dcl/)
850
+ Tue Sep 13 2005 T Horinouchi < T Koshiro
851
+ * grads_gridded.rb: debug in []
852
+ Mon Sep 12 2005 T Horinouchi
853
+ * gphys_netcdf_io.rb: added a test for the axis treatment (see below)
854
+ * axis.rb: added methods Axis#cyclic? and Axis#modulo.
855
+ * varray.rb: added methods VArray#axis_cyclic? and VArray#axis_modulo.
856
+ * grid.rb:
857
+ * refactoring: Grid.new -> self.class.new (for inheritance)
858
+ * Grid#merge: avoid redunduncy in lost_axes
859
+ Fri Sep 9 2005 T Horinouchi
860
+ * gphys-0.5.1 released (cvs tag gphys-0_5_1)
861
+ Mon Aug 29 2005 T Horinouchi
862
+ * ggraph.rb: minor improvement when [xy]intv >= 2 (to plot at max
863
+ num of grid points)
864
+ Tue Aug 23 2005 S Takehiro
865
+ * lib/numru/gphys/gpcommon.rb: 'help' method bug fix.
866
+ Tue Aug 23 2005 S Takehiro
867
+ * bin/: gpaop craated
868
+ * bin/gp*, lib/numru/gphys/gpcommon.rb: common methods to bin/gp*
869
+ command moved to gpcommon.rb.
870
+ * bin/gpview: multiple Gphys variables plotting and option --var
871
+ implemented.
872
+ * bin/gpcut,gpcat,gpaop,gpmath: Global attributes are copied to
873
+ the output ncfile when the input is NetCDF.
874
+ Sun Aug 21 2005 S Takehiro
875
+ * bin/: gpadd, gpsub, gpmulti, gpdiv removed.
876
+ Sun Aug 21 2005 S Takehiro
877
+ * bin/: gpadd, gpsub, gpmulti, gpdiv created.
878
+ Tue Aug 16 2005 T Horinouchi
879
+ * varray.rb: Added VArray#reshape.
880
+ * axis.rb: Debug in Axis#integrate (in judgment for prodefined
881
+ integration weight -- it was never to use a non-default one
882
+ becasuse of a typo). Added Axis#integ_weigtht(=) and
883
+ Axis#average_weighte(=)
884
+ Tue Aug 10 2005 S Takehiro
885
+ * bin/gpmaxmin: locations having max and min values are displayed.
886
+ utilize internal function for printing help message.
887
+ --all, --index, --number options added.
888
+ * bin/gpcat, gpcut, gpmath, gpprint, gplist: utilize internal
889
+ function for printing help message.
890
+ Tue Aug 9 2005 T Horinouchi
891
+ * doc/: updated
892
+ Tue Aug 9 2005 S Takehiro
893
+ * bin/gpview: add option --help and help function < T Horinouchi,
894
+ URL information corrected.
895
+ Tue Aug 9 2005 T Horinouchi
896
+ * ggraph.rb: contour,tone,vector: debug in the cyclic extention
897
+ handling for itr==5.
898
+ * ggraph.rb: contour,tone,vector: added option 'exchange', which
899
+ is a synonym for 'transpose'.
900
+ Sat Aug 7 2005 S Takehiro
901
+ * bin/gpmaxmin: parse_gturl removed.
902
+ * bin/gpview: option --overplot implemented.
903
+ Fri Aug 5 2005 T Horinouchi
904
+ * grid.rb: Grid#ax_dim (protected method) changed to allow
905
+ negative dimension
906
+ * install.rb: takehiro modification corrected
907
+ Wed Jul 27 2005 T Horinouchi < M Nakano
908
+ * ggraph.rb: debug vector (to use yintv for y-axis)
909
+ Thu Jul 21 2005 T Horinouchi
910
+ * bin/gdir_client: RD document commented out
911
+ * doc/index.rd: a link error corrected (gdir)
912
+ * doc/ updated
913
+ * lib/numru/gdir.rb:
914
+ * rd document changed a bit
915
+ * GDir#initialize : debug in abspath setting
916
+ Wed Jul 20 2005 S Takehiro
917
+ * recover install.rb from that for debian packaging.
918
+ Wed Jul 15 2005 S Takehiro
919
+ * bin/gpview: option --noannotate implemented.
920
+ * bin/gpcut,gpmaxmin,gpmath: open_gturl method is used
921
+ for opening gphys variable.
922
+ Wed Jul 13 2005 T Horinouchi
923
+ * varray.rb: eliminate an error in binary operations when data without
924
+ missing is on the lefthand and data with missing is on the righthand.
925
+ Thu Jun 30 2005 T Horinouchi
926
+ * gphys.rb : re-activated the correction disabled on June 21.
927
+ Wed Jun 23 2005 S Takehiro
928
+ * bin/gpview: debug, option --title implemented.
929
+ Wed Jun 22 2005 T Horinouchi
930
+ * ggraph.rb: DCLExt::color_bar : labeling improved -- to show
931
+ more digits if needed (for levels such as 1001,1002,1003,..).
932
+ (It was left to the uxypak default, chval fmt 'b', which uses only 3)
933
+ Tue Jun 22 2005 S Takehiro
934
+ * bin/gpview: debug, clipping control added to GGraph::annotate.
935
+ Tue Jun 21 2005 T Horinouchi
936
+ * doc/ updated.
937
+ * <lib/numru/gdir.rb: modified to accept DODS URLs by using
938
+ lib/numru/htdir.rb (see below).
939
+ * lib/numru/htdir.rb: Created.
940
+ class NumRu::GDir::HtDir : A class to treat the URL of a
941
+ "directory" as a directory, with a special interpretation for DODS
942
+ URL if requested.
943
+ * gphys_io.rb: GPhys::IO::file2type modified to treat URLs
944
+ starting with 'http://' as NetCDF, hoping that it is treated
945
+ as DODS extention of the NetCDF
946
+ Tue Jun 21 2005 T Horinouchi
947
+ * bin/gplist: modfied to use GDir
948
+ * doc/ updated
949
+ * bin/gdir_client: RD document added.
950
+ Fri Jun 21 2005 S Takeshiro
951
+ * bin: gpcut, gpcat, gplist, gpmath, gpmaxmin are created.
952
+ * doc: gpcut.html, gpcat.html, gplist.html, gpmath.html,
953
+ gpmaxmin.html are created.
954
+ * doc/, bin/: gpcut, gpmaxmin comment fixed.
955
+ Tue Jun 21 2005 T Horinouchi
956
+ * gphys.rb : *temporarily* disabled the modification on Jun 16:
957
+ >> not to take
958
+ >> na_other = self.data.val.fill(other)
959
+ >> which is inefficitent. But this would require a
960
+ by re-activating l.636 (be removing comment-out chars).
961
+ Plus, a minor debug of an enbug on Jun 16.
962
+ Fri Jun 17 2005 T Horinouchi < S Takeshiro
963
+ * bin/gpview: debug [dennou-ruby:002321], [dennou-ruby:002328(7)]
964
+ Thu Jun 16 2005 T Horinouchi
965
+ * gphys.rb : GPhys#coerce modified
966
+ * not to take
967
+ na_other = self.data.val.fill(other)
968
+ which is inefficitent. But this would require a
969
+ future new version of NArrayMiss (later than 1.1.1)
970
+ * set nil to units of a Numric/NArray for
971
+ correct units handling bor both add/sub and mlt/div (see below).
972
+ * varray.rb :
973
+ * Binary_operators_Uconv (+,-,add!,sbt!) : to use other's units
974
+ if 'units' attribute is emtpy (nil), rather than interpreting
975
+ it as '1' (non-dimension).
976
+ * collect a typo: sub!(which is non-exitent in NArray) --> sbt!
977
+ * grid.rb : added Grid#merge
978
+ Wed Jun 15 2005 T Horinouchi < S Takeshiro
979
+ * bin/gpprint: debug [dennou-ruby:002321]
980
+ Mon Jun 6 2005 T Horinouchi < S Otsuka
981
+ * gphys_netcdf_io.rb: modified the edition of NetCDF_IO::open just
982
+ before.
983
+ Mon Jun 6 2005 T Horinouchi
984
+ * gphys-0.5.0 released (cvs tag gphys-0_5_0)
985
+ * doc/: updated
986
+ Mon Jun 6 2005 T Horinouchi
987
+ * gdir_connect_ftp-like.rb: very minor change in URL handling
988
+ (chomp -> strip)
989
+ * bin/gdir_server: changed the default behavior to allow
990
+ connections only from the localhost. (You need specify
991
+ -a hoge.hero.org or -a all etc. to accept remote hosts.)
992
+ Mon Jun 6 2005 T Horinouchi < S Otsuka
993
+ * gphys_netcdf_io.rb: NetCDF_IO::open : improved handling of
994
+ files without coordinate variables. (add "_#{dim}" to
995
+ the automatically generated name "noname")
996
+ Mon Jun 6 2005 T Horinouchi
997
+ * gphys_io_common.rb: IO_Common::each_along_dims_write : changed to
998
+ use the new grid obtained with *_IO::write_grid
999
+ [It solves the problem reported by T Koshiro
1000
+ (Subject: GPhys::NetCDF_IO.each_along_dims_write
1001
+ Date: Wed, 27 Apr 2005 11:00:40 +0900)]
1002
+ * gphys_netcdf_io.rb: GPhys::NetCDF_IO::write_grid : changed
1003
+ to return a Grid object, in which all VArrays in the original
1004
+ grid are replaced with the new ones in the file (the return
1005
+ value used to be nil).
1006
+ * axis.rb: added methods Axis#each_varray, Axis#collect.
1007
+ Mon May 30 2005 T Horinouchi (thanks to T Koshiro)
1008
+ * ggraph.rb: GGraph#(tone|contour|vector): debug in
1009
+ cyclic extension treatment; GGraph#map_trn?: modified
1010
+ to support the debug in tone etc.
1011
+ Wed May 25 2005 T Horinouchi
1012
+ * grads_gridded.rb: GrADS_Gridded#parse_ctl: to use a bit simpler
1013
+ time representation
1014
+ * grads_gridded.rb: GrADS_Gridded#parse_starttime:
1015
+ changed to accept lower-case "z" (which is leagal).
1016
+ * grads_gridded.rb: GrADSVar#initialize: added attribute
1017
+ 'missing_value', which is 'undef' in GrADS_Gridded.
1018
+ * grads_gridded.rb: GrADS_Gridded#parse_ctl: change in the
1019
+ relative path intepretation: to deal with path without
1020
+ '^' at the beginning (BEFORE: '^hoge' -> absolute path,
1021
+ 'hoge' -> remained relative; AFTER: both -> absolute path.
1022
+ So you don't need to be at the data directory anymore.)
1023
+ Tue May 24 2005 T Horinouchi
1024
+ * grads_gridded.rb: GrADS_Gridded#get_dim: to use float for
1025
+ spacial dimensions as well as time.
1026
+ GrADSVar#vartype: to return 'float' for coordinate variables.
1027
+ * grads_gridded.rb: GrADSVar#initialize: to raise error if the
1028
+ variable name specified (varname) is not found in the ctl file.
1029
+ Fri May 13 2005 T Horinouchi
1030
+ * ggraph.rb: Added method GGraph::tone_and_contour.
1031
+ (requires numru-misc-0.0.6 or later)
1032
+ * bin/gdir_server: added option to explicitly specify host address
1033
+ * gdir.rb: sort gdirs and texts in list_*; plus, a very minor change
1034
+ * gdir_connect_ftp-like.rb: start_dcl: to call
1035
+ DCL.swpset('lwait',false) (if you don't like it, you don't need to
1036
+ use start_dcl.)
1037
+ Wed May 11 2005 T Horinouchi
1038
+ * Merged gphys-remote-0.4 in gphys:
1039
+ * commands bin/gdir_server and bin/gdir_client
1040
+ (the former was renamed from gdir_server.rb in gphys-remote).
1041
+ * irb start-up file lib/numru/gdir_connect_ftp-like.rb
1042
+ (renamed from gphys_connect_ftp-like.rb in gphys-remote).
1043
+ Tue May 10 2005 T Horinouchi
1044
+ * ggraph.rb: GGraph's visualization methods are changed to call
1045
+ DCL.gropn(1) if gropn/sgopn has not been called
1046
+ (by introducing GGraph::gropn_1_if_not_yet).
1047
+ * gdir.rb: Added GDir.pwd, GDir#each_dir, GDir#each_data.
1048
+ show, show_v are reorganized and renamed to list_all,
1049
+ list_all_v, which returns the result as strings.
1050
+ ls / ls_l now prints their results.
1051
+ Mon May 9 2005 T Horinouchi
1052
+ * subsetmapping.rb: SubsetMapping1D.new: support reversed range.
1053
+ * varray.rb: VArray#val: interpret Hash slicers for NArray/NArrayMiss
1054
+ * ggraph.rb:
1055
+ GGraph::map: added option 'fill'.
1056
+ GGraph::contour / GGraph::tone: when map projection, convert to
1057
+ the anti-clockwise coordinate to get around a bug in UMFMAP in
1058
+ DCL 5.3
1059
+ Fri May 6 2005 T Horinouchi < T Koshiro
1060
+ * ggraph.rb: GGraph::map added options "dgridmj" and "dgridmn"
1061
+ Wed Apr 27 2005 T Horinouchi
1062
+ * ggraph.rb: separated annotate_at from annotate
1063
+ Fri Apr 15 2005 T Horinouchi
1064
+ * ggraph.rb: Further modification for map projection:
1065
+ The strategy of the previous edition was not good.
1066
+ If map is to be drawn, 'itr' should be 10 and axes should be drawn
1067
+ afterwards. Eliminated the new "map" and introduced "map_axes".
1068
+ Fri Apr 15 2005 T Horinouchi
1069
+ * lib/numru/gdir.rb: added GDir#open_all_data. Renamed ls_v ->
1070
+ ls_l, which I originally meant. Supported path in show, show_v.
1071
+ Support the path argument in show and show_v
1072
+ * gphys_io.rb: corrrected a spell miss of method name in documentation
1073
+ * ggraph.rb: Revision regarding map projection:
1074
+ * GGraph::fig: Option changed from map_lat_range -> map_window
1075
+ (the latter includes log-lat range, and the former is eliminated).
1076
+ Added new option 'map_fit', which is for itr=10 and 11.
1077
+ Changed the default behavior for itr=10 (cylindrical) to fit
1078
+ the map to the data window (equiv to 'map_fit'=>true).
1079
+ Concequently, the default window for itr=10 is now the same as
1080
+ with itr=1.
1081
+ * GGraph::tone & GGraph::contour: added option 'map_fit',
1082
+ which draws map etc by switching temporarilly to itr=10 and
1083
+ calling GGraph::map.
1084
+ * sample/map_projection.rb: Revised according to the change
1085
+ of ggraph.rb. New samples were added regarding the 'map_fit'
1086
+ option of fig and the 'map' option of tone/contour.
1087
+ * doc/: updated
1088
+ Wed Apr 13 2005 T Horinouchi
1089
+ * lib/numru/gdir.rb: Imported (moved) from gphys-remote-0.3. It will be
1090
+ maintained here.
1091
+ * lib/numru/gphys.rb: to include gdir
1092
+ * gphys_io.rb: added method file2file_class(file), which returns
1093
+ NetCDF, GrADS_Gridded, or Grib.
1094
+ * doc/: updated corresponding to the import of gdir.rb
1095
+ Mon Apr 4 2005 S Nishizawa
1096
+ * grib.rb, grib_params.rb: change not to set attribute of "units" when variables have no unit.
1097
+ Fri Apr 1 2005 T Horinouchi
1098
+ * gphys_netcdf_io.rb: added a test regarging packed data.
1099
+ * Revised netcdf convension handling. This improves attribute
1100
+ handling of the user's guide convention (the default one)
1101
+ regarding data missing etc.
1102
+ * attributenetcdf.rb: AttributeNetCDF#initialize to extend
1103
+ Attribute_Mixin whose default is defined in netcdf_convention.rb
1104
+ * netcdf_convention.rb: created module Attribute_Mixin
1105
+ in NetCDF_Convention_Users_Guide. Moved contents of
1106
+ VArray_Mixin to Attribute_NetCDF, which is to move
1107
+ attribute editor on copying (deep-cloning) from VArrayNetCDF
1108
+ to AttributeNetCDF (which is used in VArrayNetCDF).
1109
+ * grads_gridded.rb: minor revision of documentation.
1110
+ allowed modes: "r" & "w+" --> "r" & "w" (read only / write only).
1111
+ * doc/: updated
1112
+ Thu Mar 31 2005 S Nishizawa
1113
+ * grib.rb: remove @define_mode and Grib#enddef
1114
+ change value by units to write
1115
+ * varraygrib.rb: change as removing Grib#enddef
1116
+ * gphys_grib_io.rb: small change in test
1117
+ Thu Mar 31 2005 T Horinouchi
1118
+ * grib.rb: Grib: eliminated @mode and introduced @define_mode
1119
+ (It is a half-hearted job, since no @define_mode check is
1120
+ introduced in the write method)
1121
+ Thu Mar 31 2005 T Horinouchi
1122
+ * grib.rb: minor update of Grib#initialize (to refuse "w+";
1123
+ corresponding error message at l.1268; documentation of file mode).
1124
+ Wed Mar 30 2005 R Mizuta
1125
+ * gphys_grads_io.rb, varraygrads.rb:
1126
+ output normal gphys into GrADS file
1127
+ Wed May 30 2005 S Nishizawa
1128
+ * grib.rb: bugfix in opening file for write
1129
+ * gphys_grib_io.rb: add test for writing, change variable name in test
1130
+ * varraygrib.rb: change variable name in test
1131
+ Wed Mar 30 2005 R Mizuta
1132
+ * grads_gridded.rb:
1133
+ * speed up in reading
1134
+ * GrADSVar followed changes of NetCDFVar
1135
+ * grads_gridded.rb, varraygrads.rb:
1136
+ gives more readable control file in GrADS output
1137
+ * gphys_grads_io.rb: bug in the test code fixed
1138
+ Tue Mar 29 2005 T Horincouhi
1139
+ * gphys_io.rb: Added methods parse_gturl and open_gturl
1140
+ (the former was moved from bin/gpprint to gphys_io.rb).
1141
+ * bin/gpprint,bin/gpview: modified to use GPhys::IO.open_gturl
1142
+ * doc/: updated
1143
+ Tue Mar 29 2005 S Nishizawa
1144
+ * grib.rb: change status
1145
+ Tue Mar 29 2005 T Horincouhi
1146
+ * bin/grads2nc_with_gphys: debug (repoted by S Nishizawa 2005/03/15)
1147
+ * axis.rb: document written. Changed return value of set_aux to self.
1148
+ * grid.rb: document written.
1149
+ * gphys.rb: minor updates of the document.
1150
+ * doc/: updated
1151
+ Tue Mar 29 2005 S Nishizawa
1152
+ * grib.rb: remove space from attribute key names
1153
+ Tue Mar 29 2005 S Nishizawa
1154
+ * grib.rb: add attribute of "level" and "time" when number of level and time is one
1155
+ Tue Mar 29 2005 S Nishizawa
1156
+ * grib.rb: bugfix when number of bit for packing is odd
1157
+ Tue Mar 29 2005 T Horincouhi
1158
+ * gphys_io.rb: RD document written
1159
+ * gphys.rb:
1160
+ * Added a class method GPhys.each_along_dims, along with its test.
1161
+ * Changed return value of replace_val, set_att, and del_att to self.
1162
+ * doc/: updated
1163
+ Mon Mar 29 2005 S Nishizawa
1164
+ * grib.rb, grib_params.rb: add some new definitions of variables and levels for NCEP grib file.
1165
+ Mon Mar 28 2005 T Horincouhi
1166
+ * grib.rb: debug to open grib files in the binary mode.
1167
+ * gphys_netcdf_io.rb: debug in is_a_NetCDF?: to open with
1168
+ the binary mode.
1169
+ Sat Mar 26 2005 R Mizuta
1170
+ * grads_gridded.rb: open binary file with binary mode
1171
+ Fri Mar 25 2005 T Horinouchi
1172
+ * attribute.rb: attribute name is limited to those that matche
1173
+ /^[A-Za-z_]\w*$/. Removed Numeric from allowed value type
1174
+ list: Use a 1-element NArray instead.
1175
+ Fri Mar 25 2005 S Nishizawa
1176
+ * grib.rb: change ' ' to '_' in name of attribute
1177
+ change value to NArray with rank of 1 for value of attribute
1178
+ Fri Mar 25 2005 S Nishizawa
1179
+ * grib.rb: enable Grib#[] to get negative value
1180
+ * gphyx_grib_io.rb: add name and atts to aux for hybrid level
1181
+ Fri Mar 25 2005 S Nishizawa
1182
+ * grib.rb: change value of hybrid level
1183
+ bugfix
1184
+ * gphys_grib_io.rb: use Axis#set_aux for hybrid level
1185
+ Mon Mar 21 2005 S Nishizawa
1186
+ * grib.rb: bugfix for hybrid level
1187
+ Mon Mar 21 2005 S Nishizawa
1188
+ * grib.rb: bugfix in Grib.write
1189
+ * grib_params.rb: add variable of unknown
1190
+ Mon Mar 21 2005 S Nishizawa
1191
+ * grib.rb: change value of hybrid level from level number to coordinate parameters.
1192
+ Mon Mar 21 2005 T Horinouchi
1193
+ * gphys_io.rb: IO::fil2type: added case when Grib.
1194
+ * gphys_grib_io.rb: Grib_IO::write: added the 3rd argument
1195
+ as name_dummy=nil, which is a dummy and is never used but
1196
+ is present for consistency with other *_IO modules.
1197
+ Wed Mar 16 2005 T Horinouchi
1198
+ * doc/ updated.
1199
+ Wed Mar 16 2005 T Horinouchi
1200
+ * gphys-0.4.0 released (cvs tag gphys-0_4_0)
1201
+ * ggraph.rb: color_bar: changed not to draw a colobar when
1202
+ the # of levels is less or equal to 1 (warning is made
1203
+ in this case).
1204
+ Fri Mar 11 2005 D Tsukahara
1205
+ * ggraph.rb: minor bugfix
1206
+ Thu Mar 10 2005 D Tsukahara
1207
+ * ggraph.rb: minor bugfix for (Wed Mar 09 2005 D Tsukahara)
1208
+ Thu Mar 10 2005 S Nishizawa
1209
+ * grib.rb: change way to make variables of longitude and latitude.
1210
+ * gphys_grib_io.rb: change to set bare_index true at hybrid level
1211
+ Thu Mar 10 2005 S Nishizawa
1212
+ * grib.rb, grib_params.rb: add standard_name attribution to variables
1213
+ Thu Mar 10 2005 S Nishizawa
1214
+ * grib_params.rb: change name of variable to the same name of wgrib if it possible.
1215
+ * grib.rb: minor bugfix
1216
+ Thu Mar 10 2005 S Nishizawa
1217
+ * T.jan.grib: sample grib file converted from T.jan.nc
1218
+ * grib.rb, gphys_grib_io.rb: change to use T.jan.grib in sample code, change name from is_aGrib? to is_a_Grib?
1219
+ * gphys_netcdf_io.rb, gphys_grads_io.rb, gphys_grib_io.rb, grib.rb: bugfix for is_a_*?
1220
+ Thu Mar 10 2005 T Horinouchi
1221
+ * axis.rb,varray.rb: to deal with axis plot direction
1222
+ specification:
1223
+ axis.rb: added new method Axis#draw_positive, which simply calls
1224
+ @pos.axis_draw_positive (see below).
1225
+ varray.rb: added new method VArray#axis_draw_positive, which
1226
+ returns true (positive=='up'), false (positive=='down'), or
1227
+ nil (undefined) --- this is based on a widely-used NetCDF
1228
+ convention, so redefine it in VArray's subclasses if not
1229
+ appropriate
1230
+ Thu Mar 10 2005 T Horinouchi
1231
+ * netcdf_convention.rb:
1232
+ * in private method _op_attr_edit (called when operations are made)
1233
+ in NetCDF_Convention_Users_Guide:
1234
+ * Added deletion of _FillValue.
1235
+ * To unpack valid_* and missing_value if appropriate
1236
+ (in a separate new private method _unpack_missing_specification)
1237
+ * testdata/T.jan.packed.withmiss.nc: Added for test
1238
+ (requires RubyNetCDF 0.6.0, since missing_value is in
1239
+ the packed data type.)
1240
+ Wed Mar 09 2005 D Tsukahara
1241
+ * ggraph.rb: fix fig (option "window" can have its element "nil"),
1242
+ line and mark (add option "max", "min")
1243
+ * bin/gpview: apply option "range" for line plot
1244
+ * doc/ep_flux/index*: change link for tutorial page
1245
+ Tue Mar 07 2005 T Horinouchi < T Koshiro
1246
+ * ggraph.rb: [dennou-ruby:002075] support auto-level setting when
1247
+ level is explicitly given.
1248
+ Tue Mar 07 2005 S Nishizawa
1249
+ * gphys_IO.rb gphys_netcdf_io.rb gphys_grads_io.rb gphys_grib_io.rb:
1250
+ add class methods; var_names, var_names_except_coordinates, is_a_[NetCDF,GrADS,Grib]?, respectively, except gphys_io.rb
1251
+ add part using is_a_*? methods to distinction of file type
1252
+ Thu Mar 03 2005 D Tsukahara
1253
+ * doc/derivative/math-doc/*: fix and amend a text
1254
+ Tue Mar 02 2005 S Nishizawa
1255
+ * grib.rb, varraygrib.rb, gphys_grib_io.rb: support writing
1256
+ Tue Feb 26 2005 S Nishizawa
1257
+ * grib.rb: remove dimension variables from variables
1258
+ change timing to obtain variable infomation from Grib.open to Grib#var
1259
+ add methods GribDim#get, GribDim#[], GribDim#[set,put]_att, DribDim#att
1260
+ * varraygrib.rb, gphys_grib_io.rb: some changes corresponding to the changes of grib.rb
1261
+ Tue Feb 25 2005 S Nishizawa
1262
+ * grib.rb: support missing value
1263
+ * varraygrib.rb: change path of grib.rb
1264
+ Tue Feb 25 2005 S Nishizawa
1265
+ * grib.rb: change to use NArray.to_na
1266
+ some changes to speed up
1267
+ Tue Feb 24 2005 S Nishizawa
1268
+ * grib.rb: separate definition of parameters to grib_params.rb
1269
+ * grib_params.rb: imported (from separated from grib.rb and added some new definitions for ECMWF datasets)
1270
+ Tue Feb 22 2005 S Nishizawa (cvs committed by Horinouchi)
1271
+ * grib.rb,varraygrib.rb,gphys_grib_io.rb: imported.
1272
+ (Grib data handlers.)
1273
+ Thu Feb 19 2005 D Tsukahara
1274
+ * doc/ep_flux/math-doc/*: fix and amend a text(Thanks to M Ishiwatari)
1275
+ Thu Feb 16 2005 D Tsukahara
1276
+ * ep_flux.rb: fix EP_Flux::strm_rmean( change integrate method ),
1277
+ delete EP_Flux::prepare_for_divergence_on_merdional_section.
1278
+ * test/test_ep_flux.rb: add test for strm_rmean( looks succesfully )
1279
+ * doc/ep_flux/ep_flux.html: regenerated
1280
+ Thu Feb 10 2005 D Tsukahara
1281
+ * bin/gpview: add option --map, --m, --reverse, -Gr.
1282
+ change option parser (getopts => getoptlong) because
1283
+ getopts would be obsolute.
1284
+ * doc/gpview.html: regenerated.
1285
+ Thu Feb 3 2005 T Horinouchi
1286
+ * gphys_io_common.rb: IO_common::each_along_dims_write: modified
1287
+ to accept GPhys'es that do not have the same shape ---
1288
+ It's now ok as long as the dimensions to loop are shared.
1289
+ * gphys_netcdf_io.rb: Added a test for the new feature of
1290
+ each_long_dims_write. Plus, documentation updated.
1291
+ * doc/gphys_netcdf_io.html: regenerated.
1292
+ Thu Feb 3 2005 T Horinouchi
1293
+ * gphys_io_common.rb: IO_common::each_along_dims_write: modified
1294
+ to accept GPhys'es that do not have the same shape ---
1295
+ It's now ok as long as the dimensions to loop are shared.
1296
+ * gphys_netcdf_io.rb: Added a test for the new feature of
1297
+ each_long_dims_write. Plus, documentation updated.
1298
+ * doc/gphys_netcdf_io.html: regenerated.
1299
+ Wed Feb 02 2005 D Tsukahara < M Nakano
1300
+ * bin/gpview: debug about looopsense_flag(each_along_dims)
1301
+ Wed Jan 26 2005 S Takehiro
1302
+ * options --map_axis and --similar are added to gpview.
1303
+ Tue Jan 25 2005 T Horinouchi < S Takehiro
1304
+ * numru/ggraph.rb: support tranformation number 5 (polar
1305
+ coorodnate) by S Takeshiro (with a modification by Horinouchi).
1306
+ Added: GGraph::polar_coordinate_boundaries
1307
+ GGraph::sim_trn? (currently not used)
1308
+ Modified: GGraph::fig, GGraph::contour, GGraph::tone
1309
+ Tue Jan 25 2005 T Horinouchi
1310
+ * gphys.rb: GPhys#cyclic_ext debug
1311
+ Thu Jan 20 2005 T Horinouchi < T Koshiro
1312
+ * numru/ggraph.rb: DCLExt::color_bar -- always lclip=false in
1313
+ the method.
1314
+ Mon Jan 17 2005 T Horinouchi
1315
+ * numru/ggraph.rb: added contour test under map projection
1316
+ * gphys.rb: debug in GPhys::cyclic_ext
1317
+ * varray.rb,gphys.rb: Added methods VArray#long_name,
1318
+ VArray#long_name=, GPhys#long_name, GPhys#long_name=.
1319
+ Fri Jan 14 2005 T Horinouchi
1320
+ * gphys-0.3.5 released (cvs tag gphys-0_3_5)
1321
+ Fri Jan 14 2005 T Horinouchi
1322
+ * bin/gpview: l.202 'itr'=>($OPT_itr) --> 'itr'=>($OPT_itr.to_i)
1323
+ --mean and --animate are changed to accpet integers as well as
1324
+ dimension names.
1325
+ Fri Jan 14 2005 D Tsukahara
1326
+ * bin/gpview: delete --map, -m(don't redef GGraph's method)
1327
+ Fri Jan 14 2005 R Mizuta
1328
+ * numru/gphys/grads_gridded.rb: disuse Date.parse (for Ruby 1.6)
1329
+ Fri Jan 14 2005 T Horinouchi < S Takehiro
1330
+ * install.rb: editied help messaging
1331
+ Thu Jan 13 2005 T Horinouchi
1332
+ * numru/ggraph.rb: DCLExt::color_bar: bug fix in the calculation
1333
+ of offs_(tick|label) under the uniform tone level interval
1334
+ (independent of Mizuta-kun's revision).
1335
+ Added 3 sample graphics for map projection (graph 22-24).
1336
+ Added contour to graph 11.
1337
+ * doc/ggraph.html: regenerated
1338
+ Thu Jan 13 2005 R Mizuta
1339
+ * numru/ggraph.rb: DCLExt::color_bar: added options (constwidth,index).
1340
+ Wed Jan 12 2005 T Horinouchi
1341
+ * numru/ggraph.rb: Support map projection:
1342
+ new methods: map, set_map, next_map, map_trn?
1343
+ modified methods: fig, title, annotate, contour, tone, vector
1344
+ * numru/ggraph.rb: documents updated.
1345
+ * grid.rb: set_axis: modified to return self.
1346
+ * gphys.rb: added new method cyclic_ext.
1347
+ * varray.rb: [], []=: modified to accept false (rubber dim)
1348
+ Unbelievable that it was not yet.
1349
+ * sample/map_projection.rb: created. (sample program to demonstrate
1350
+ map projection with GGraph)
1351
+ * doc/gpprint.html,doc/gpview.html,doc/grads2nc_with_gphys.html:
1352
+ created using rd2.
1353
+ * doc/index.(rd|html): modified to include the commands.
1354
+ Mon Jan 12 2005 D Tsukahara
1355
+ * bin/gpview: use GGraph::margin_info and GGraph::color_bar. Add many
1356
+ options(ex. s/cint, s/crange, aspect...), write options document,
1357
+ and fix SAMPLE.
1358
+ Mon Jan 10 2005 T Horinouchi (partly < D Tsukahara)
1359
+ * install.rb: changed to install files in bin/
1360
+ * bin/install.rb: removed
1361
+ * bin/grads2nc_with_gphys: renamed grads2nc.rb to grads2nc_with_gphys
1362
+ * bin/gpprint: added
1363
+ * bin/gpview: added -- This program was written by D Tsukahara
1364
+ and imported from [dennou-ruby:001970]
1365
+ Mon Jan 10 2005 T Horinouchi
1366
+ * numru/ggraph.rb: Added GGraph::margin_info, which shows
1367
+ strings in the bottom margin (representing program name, date,
1368
+ and data source)
1369
+ * numru/ggraph.rb: DCLExt::color_bar: improved the algorithm used
1370
+ to define levels to label.
1371
+ Tue Dec 7 2004 T Horinouchi
1372
+ * numru/ggraph.rb: DCLExt::color_bar: changed the default to portrait
1373
+ (which looks nicer). Labelling is improved to chose good levels.
1374
+ Mon Dec 6 2004 T Horinouchi
1375
+ * grid.rb: Grid#transpose modified to preserve @lost_axes
1376
+ Fri Dec 3 2004 T Horinouchi
1377
+ * varray.rb: VArray#coerse: added NArrayMiss support
1378
+ Wed Dec 1 2004 T Horinouchi
1379
+ * numru/ggraph.rb:
1380
+ * GGraph::tone: changed the default value of 'tonc'
1381
+ and 'tonf' to false. (there seems a bug in uetonf, while a bug in
1382
+ uetone must have eliminated in dcl5.3. Also, I think it was my
1383
+ careless mistake to set the default val of 'tonc' to true.)
1384
+ Changed the timing to call DCL.ueitlv -- this is to leave
1385
+ tone levels for color bars.
1386
+ * DCLExt::color_bar: Created. General program to draw COLOR BARS.
1387
+ Mon Nov 29 2004 R Mizuta
1388
+ * numru/gphys/grads_gridded.rb: changed the basis of time axis
1389
+ from the first Julian period to the date of the first data record.
1390
+ Wed Nov 24 2004 R Mizuta
1391
+ * numru/gphys/grads_gridded.rb: support data containing missing data,
1392
+ 2-byte signed integers, and 1-byte unsigned integers.
1393
+ Tue Nov 12 2004 D Tsukahara
1394
+ * numru/gphys/ep_flux.rb:
1395
+ 1. add accesor method p00 and modified set||get constants
1396
+ 2. undef C_p and R; instead def @@cp, @@gas_const and accesor method.
1397
+ 3. fix document: ep_full_sphere(about argument xfzdims)
1398
+ * test/test_ep_flux.rb: reflect adjustment of ep_flux.rb
1399
+ Tue Nov 09 2004 T Horinouchi
1400
+ * gphys-0.3.4 released (cvs tag gphys-0_3_4)
1401
+ * varray.rb: coerce: changed the assumptions of the units of
1402
+ Numeric etc (to assume the same units instead of non-dim, for
1403
+ consistency between numeric+varray and varray+numeric).
1404
+ Refactoring regarding attribute copying.
1405
+ Mon Nov 08 2004 T Horinouchi
1406
+ * numru/gphys.rb: to require numru/gphys/ep_flux
1407
+ (which requires numru/gphys/derivative etc)
1408
+ Mon Nov 08 2004 D Tsukahara
1409
+ * numru/gphys/ep_flux.rb: modified
1410
+ 1. add accesor method g_forces
1411
+ 2. delete "require numru/gphys"
1412
+ 3. fixed strm_rmean : change int_v (VArray => GPhys) and not setting
1413
+ units.
1414
+ * sample/ep_flux/demo_NCEP_1.rb,demo_NCEP_2.rb,demo_NCEP_3.rb:
1415
+ write testdata's URL and simple description.
1416
+ Tue Nov 02 2004 D Tsukahara
1417
+ * doc/ep_flux.rd,ep_flux.html: fixed dead link and updated for Tutrial.
1418
+ * numru/ggraph_on_merdional_section.rb:
1419
+ delete GGraph::divergence_on_merdional_section
1420
+ * doc/ep_flux/ggraph_on_merdional_section.html:
1421
+ delete GGraph::divergence_on_merdional_section
1422
+ Thu Nov 02 2004 T Horinouchi
1423
+ * doc/index.(rd|html) updated for ep_flux and derivative.
1424
+ Tue Nov 02 2004 D Tsukahara
1425
+ * numru/gphys/ep_flux.rb: created
1426
+ * numru/ggraph_on_merdional_section.rb: created
1427
+ * TODO_ep_flux: created
1428
+ * numru/derivative.rb: created
1429
+ * numru/gphys/derivative.rb: created
1430
+ * test/test_ep_flux.rb:created
1431
+ * sample/ep_flux/demo_NCEP_1.rb,demo_NCEP_2.rb,demo_NCEP_3.rb: created
1432
+ (require demo-data)
1433
+ * doc/ep_flux/index.rd,index.html,ep_flux.html,
1434
+ ggraph_on_merdional_section.html: created
1435
+ * doc/ep_flux/math-doc/document.tex,document.pdf: created
1436
+ * doc/ep_flux/math-doc/document/*: many mathmatical document files
1437
+ created (html version)
1438
+ * doc/derivative/index.rd,index.html,numru-derivative.html,
1439
+ gphys-derivative.html: created
1440
+ * doc/derivative/math-doc/document.tex,document.pdf: created
1441
+ * doc/derivative/math-doc/document/*: many mathmatical document files
1442
+ created (html version)
1443
+ Thu Aug 26 2004 T Horinouchi
1444
+ * gphys_io_common.rb: debug in each_along_dims_write
1445
+ Fri Aug 18 2004 T Horinouchi
1446
+ * ggraph.rb: Added options 'tonf', 'tonc' to GGraph.tone
1447
+ Fri Aug 12 2004 T Horinouchi
1448
+ * ggraph.rb: Added GGraph::vector. Renamed DCLExt::ug_flow_vect
1449
+ to DCLExt::flow_vect and revised. Added DCLExt::unit_vect;
1450
+ DCLExt::set_unit_vect_options, and DCLExt::next_unit_vect_options.
1451
+ * gphys.rb: added att_names, get_att, set_att,
1452
+ put_att(aliased to set_att), del_att.
1453
+ * varray.rb: added VArray#attr_copy
1454
+ * netcdf_convention.rb: _op_attr_edit: not to delete 'long_name'
1455
+ Fri Aug 10 2004 T Horinouchi
1456
+ * varray.rb,gphys.rb: added method convert_units
1457
+ Fri Aug 9 2004 T Horinouchi
1458
+ * ggraph.rb: added DCLExt::ug_flow_vect
1459
+ * removed ggraph_old.rb (to be deleted in the next release)
1460
+ Fri Aug 9 2004 T Horinouchi
1461
+ * gphys-0.3.3 released (cvs tag gphys-0_3_3)
1462
+ * grid.rb: delete_axes: to allow dimension specification by name(s)
1463
+ * axis.rb(,gphys.rb): added Axis#to_gphys(datavary1d=nil), which
1464
+ makes a 1D GPhys object using the axis. By default, the axis's
1465
+ coordinate variable is used as the data.
1466
+ Its test program was added to gphys.rb.
1467
+ * ggraph.rb: contour,tone: added transpose option to exchange x&y axes.
1468
+ * grid.rb,varray.rb,gphys.rb: added transpose method.
1469
+ * varray.rb: added VArray#del_att. VArray#coerce: support UNumeric.
1470
+ asin, atan etc: units of the return value set to 'rad' (it was '1')
1471
+ * unumeric.rb: debug in expection messaging in UNumeric#convert2
1472
+ Math funcs such as log&sin: to return UNumeric (instead of Numeric).
1473
+ Added atan2.
1474
+ asin, atan etc: units of the return value set to 'rad' (it was '1')
1475
+ Fri Jul 16 2004 T Horinouchi
1476
+ * ggraph.rb:
1477
+ axes -- to set the uz parameter 'roffxt', when units of the left
1478
+ y axis is to be written to avoid the overlay with the title.
1479
+ line -- added a new parameter 'label'
1480
+ Thu Jul 15 2004 T Horinouchi
1481
+ * gphys_fft.rb: added GPhys#detrend, GPhys#cos_taper,
1482
+ and GPhys::COS_TAPER_SP_FACTOR (==1/0.875)
1483
+ Thu Jul 15 2004 R Mizuta
1484
+ * grads_gridded.rb: created natts, get_att, and att_names
1485
+ Thu Jun 10 2004 T Horinouchi
1486
+ * grads_gridded.rb: treat cray_32bit_ieee as bigendian
1487
+ Thu May 24 2004 R Mizuta
1488
+ * coordtransform.rb: bug fixed
1489
+ Fri May 21 2004 T Horinouchi
1490
+ * gphys-0.3.2 released (cvs tag gphys-0_3_2)
1491
+ * gphys_io_common.rb: debug in each_along_dims_write -- the previous
1492
+ version did not work with the unlimited dimension.
1493
+ * coordtransform.rb: minor change (HAVE_SSL2 -> HAVE_NUMRU_SSL2)
1494
+ Mon May 10 2004 R Mizuta
1495
+ * grads_gridded.rb,gphys_grads_io.rb,varraygrads.rb:
1496
+ supported GrADS output
1497
+ * coordtransform.rb: linear interpolation without SSL2
1498
+ Wed May 5 2004 T Horinouchi
1499
+ * gphys.rb: [],[]=: minor debug (handling of specification by dim name)
1500
+ * ggraph.rb: _set_tone_levels_ (used in tone): improved --
1501
+ it is ok now not to specify 'patterns'.
1502
+ tone: added options 'clr_min', 'clr_max' (just for convenience
1503
+ and consitstency with contour --- one can instead directly
1504
+ specify the uepack parameter icolor[12])
1505
+ Tue May 4 2004 T Horinouchi
1506
+ * gphys_fft.rb: debug & improve coordinate handling in GPhys#fft
1507
+ Sun May 2 2004 T Horinouchi
1508
+ * gphys_fft.rb: added units handling in rawspect2powerspect
1509
+ * unumeric.rb: debug in "/"; added the "**"
1510
+ Fri Apr 2 2004 T Horinouchi
1511
+ * netcdf_convention.rb: NetCDF_Conventions::find -> not to raise an
1512
+ exception when gtool4
1513
+ Sun Mar 21 2004 T Horinouchi
1514
+ * gphys-0.3.1 released (cvs tag gphys-0_3_1)
1515
+ * ggraph.rb,gphys.rb: Moved GPhys#first1D & GPhys#first1D from the
1516
+ former to the latter.
1517
+ * gphys_io.rb: very minor change
1518
+ Sat Mar 20 2004 T Horinouchi
1519
+ * grads_gridded.rb: GrADS_Gridded: added reader to @ctlfile
1520
+ * lib/numru/gphys.rb: changed required files accordingly
1521
+ * gphys_io.rb: Created (module GPhys::IO).
1522
+ Consolidates specific IO modules such as GrADS_IO and NetCDF_IO.
1523
+ Figures out file type internally and forward messages to
1524
+ appropriate modules.
1525
+ * gphys_io_common.rb: Created by separating from
1526
+ gphys_netcdf_io.rb. Internal usage only (to be used by IO,
1527
+ NetCDF_IO, GrADS_IO etc.)
1528
+ * gphys_netcdf_io.rb: Separated module IO_Common into
1529
+ gphys_io_common.rb.
1530
+ Fri Mar 19 2004 T Horinouchi
1531
+ * ggraph.rb: Do not check class of a VArray (for dRuby)
1532
+ * varray.rb: NMath --> Misc::EMath, debug: VArray#** (units treatment)
1533
+ * unumeric.rb: scale-offset conversion --> to warn regardress $VERBOSE
1534
+ Thu Mar 4 2004 T Horinouchi
1535
+ * varray.rb: __ntype: "lint" -> "int"
1536
+ Tue Mar 2 2004 T Horinouchi
1537
+ * netcdf_convention.rb: minor debug in an exception message
1538
+ Tue Mar 2 2004 T Horinouchi
1539
+ * gphys-0.3.0 released (cvs tag gphys-0_3_0)
1540
+ * doc/index.rd: created (separated from lib/numru/gphys.rb)
1541
+ * netcdf_convention.rb: CREATED. To hold NetCDF convensions
1542
+ --- better support of the User's Guide convention.
1543
+ Supported the Wind Profiler convention.
1544
+ * unumeric.rb: added documentation.
1545
+ * gphys_netcdf_io.rb,varraynetcdf.rb,varraycomposite.rb: changed
1546
+ according to the introduction of netcdf_convention.rb
1547
+ * varray.rb,gphys.rb: supported atan2
1548
+ * attributenetcdf.rb: AttributeNetCDF.new: to accept a NetCDF in
1549
+ addition to NetCDFVar (this is to support global attributes).
1550
+ Mon Mar 1 2004 T Horinouchi
1551
+ * varraycomposite.rb: val: to support NArraMiss; added convention
1552
+ * varraynetcdf.rb: convention module moved in from gphys_netcdf_io.rb.
1553
+ NetCDFVar#get/put re-aliasesed to (get|put)_with_miss_and_scaling
1554
+ (by default, they are aliased to simple_(get|put)).
1555
+ (CAUTION: Need NArrayMiss newer THAN 1.0.1, which has a bug)
1556
+ * gphys_netcdf_io.rb: convention module moved out to varraynetcdf.rb
1557
+ Sun Feb 29 2004 T Horinouchi
1558
+ * unumeric.rb: added to_f, to_i
1559
+ Sat Feb 28 2004 T Horinouchi
1560
+ * gphys_fft.rb: change to use a NumRu::Units operation in wavenum calc
1561
+ Fri Feb 27 2004 T Horinouchi
1562
+ * unumeric.rb: created.
1563
+ * varray.rb: Modified to use NumRu::Units
1564
+ - added methods units and units=
1565
+ - modified Math funcs, binary operators, and
1566
+ type3_methods (mean,max,etc).
1567
+ * gphys.rb: added methods units and units= (forwarded to @data)
1568
+ * axis.rb,grid.rb: minor change in response to the change in varray.rb
1569
+ Fri Feb 27 2004 T Horinouchi
1570
+ * varray.rb: improved binary operators (to coerce unknown objects).
1571
+ VArray#coerce: debug.
1572
+ VArray#val: changed to return @ary.dup instead of @ary for
1573
+ consistency with other VArray subclasses and the mapping case.
1574
+ * gphys.rb: added GPhys#coerce,
1575
+ binary&math operators: changed to copy the grid
1576
+ Thu Feb 5 2004 T Horinouchi
1577
+ * gphys_fft.rb: Debuged spect_zero_centering and spect_one_sided.
1578
+ Made a test part. Added rawspect2powerspect.
1579
+ Wed Feb 4 2004 T Horinouchi
1580
+ * varray.rb: increased NArray_type1_methods (such as real, imag,
1581
+ random, etc.etc.) and Binary_operators (imag=).
1582
+ * gphys_fft.rb: added new GPhys methods spect_zero_centering
1583
+ and spect_one_sided.
1584
+ Thu Jan 29 2004 T Horinouchi < S Nishizawa
1585
+ * gphys_netcdf_io.rb: debug in NetCDF_IO::open
1586
+ Thu Jan 29 2004 T Horinouchi
1587
+ * gphys-0.2.3 released
1588
+ * axis.rb: Axis#cut/Axis#cut_rank_conserving:
1589
+ supported multiple position specification by Array/NArray
1590
+ * gphys.rb: added a test for GPhys#cut (which depends on Axis#cut)
1591
+ * varray.rb,gphys.rb: removed spaces before parentheses.
1592
+ Tue Jan 27 2004 T Horinouchi
1593
+ * varraycomposite.rb: redefined methods ntype and typecode
1594
+ Tue Jan 6 2004 T Horinouchi
1595
+ * gphys_netcdf_io.rb: created GPhys::IO_Common module, which is to
1596
+ be separated in a independent file in future.
1597
+ Made IO_Common::each_along_dims_write and
1598
+ NetCDF_IO::each_along_dims_write, where the latter uses the former.
1599
+ * axis.rb: debug in Axis#[] (treatment of @aux)
1600
+ * gphys.rb: added GPhys#rename
1601
+ Mon Jan 5 2004 T Horinouchi
1602
+ * varraynetcdf.rb: aliased VArrayNetCDF.new2 to VArrayNetCDF.def_var
1603
+ * gphys.rb: created GPhys#dim_index.
1604
+ GPhys#[], GPhys#[]= : enhanced to support specification by Hash
1605
+ (with keys representing axis names. e.g., gphys['x'=>2..-3]).
1606
+ Sun Jan 4 2004 T Horinouchi
1607
+ * grid.rb: unify Grid#axis and Grid#get_axis (so, get_axis
1608
+ is kept only for backward compatibility)
1609
+ * gphys.rb: replaced Grid#get_axis calls with Grid#axis calls.
1610
+ Created GPhys#grid_copy to return a deep clone of the grid
1611
+ (@grid.copy).
1612
+ * gphys_netcdf_io.rb: separated NetCDF_IO::write_grid from
1613
+ NetCDF_IO::write
1614
+ * varraynetcdf.rb: VArrayNetCDF.new2 (class method): to allow
1615
+ dimension specification by name.
1616
+ Thu Nov 20 2003 T Horinouchi
1617
+ * gphys_fft.rb: to use FFTW3 if exists
1618
+ Mon Nov 17 2003 T Horinouchi
1619
+ * lib/numru/gphys.rb: to require gphys_operations
1620
+ * gphys_fft.rb: created
1621
+ * varray.rb: VArray#name modified to return a copy (dup) of the name
1622
+ * varray.rb: added "abs" to NArray_type1_methods
1623
+ * varray.rb: added a new method VArray#replace_val
1624
+ * gphys.rb: added a new method GPhys#replace_val
1625
+ Mon Nov 10 2003 R Mizuta
1626
+ * ggraph.rb: debug in tone, options added to axes, and
1627
+ support of String in xx_set_params
1628
+ Sun Nov 9 2003 T Horinouchi
1629
+ * gphys_netcdf_io.rb: debug in __to_na_of_netcdf.
1630
+ Fri Nov 7 2003 T Horinouchi
1631
+ * gphys-0.2.2 released
1632
+ * bin/grads2nc.rb: created. (file format converter)
1633
+ * bin/install.rb: created. (to install files in bin/)
1634
+ * lib/numru/gphys.rb: to require "gphys_grads_io.rb"
1635
+ * gphys_grads_io.rb: added an RD document
1636
+ Wed Nov 5 2003 T Horinouchi
1637
+ * varray.rb: added to_i, to_f and to_type to NArray_type1_methods
1638
+ Tue Oct 28 2003 R Mizuta
1639
+ * grads_gridded.rb: bugs fixed and ruby-1.8 support
1640
+ * gphys_grads_io.rb: transforms GrADS into NetCDF in the test code.
1641
+ Tue Oct 28 2003 T Horinouchi
1642
+ * varraynetcf.rb: VArrayNetCDF#write: debug unlim-dim treatment etc.
1643
+ VArrayNetCDF#val=: improved unlimited dim treatment.
1644
+ Fri Oct 24 2003 T Horinouchi
1645
+ * gphys.rb: enhanced GPhys#mean etc (VArray::NArray_type3_methods)
1646
+ to accept specification by name
1647
+ * grid.rb: changed Grid#axnames and Grid#lost_axes to duplicate
1648
+ the resultant array to return.
1649
+ Thu Oct 23 2003 T Horinouchi
1650
+ * gphys.rb: debug - Binary operators, GPhys#shape_coerce
1651
+ * varray.rb: aliases set_att to put_att
1652
+ Wed Oct 1 2003 T Horinouchi
1653
+ * subsetmapping.rb: debug for the irregular mapping
1654
+ * axis.rb: Axis[] was modified to accept NArray and Array
1655
+ Fri Sep 26 2003 T Horinouchi
1656
+ * gphys-0.2.1 released
1657
+ * varray.rb,varraycomposite.rb: set_att changed to return self
1658
+ * gphys_netcdf_io.rb: support multiple gphys output in a single
1659
+ file
1660
+ * testdata/cira86.dat: (added) text file to hold the CIRA86 data
1661
+ * sample/cira86_to_nc.rb: converts the CIRA data into NetCDF file
1662
+ via GPhys.
1663
+ Tue Sep 23 2003 T Horinouchi
1664
+ * axis.rb,grid.rb: use sprintf("%g",..) to format lost axis info.
1665
+ * varraycomposite.rb: further debug in [].
1666
+ * varray.rb: debug for NArray_type3_methods (NArrayMiss handling)
1667
+ * gphys_netcdf_io.rb: found bug in missing data handling. Not
1668
+ fully fixed but disabled -- waiting for the NArrayMiss handling
1669
+ support by RubyDCL.
1670
+ Mon Sep 22 2003 T Horinouchi
1671
+ * axis.rb: to require "numru/gphys/varraycomposite"
1672
+ * varraycomposite.rb: support the rubber dim. debug in [].
1673
+ * gphys_netcdf_io.rb: NetCDF_IO.open: support multiple files.
1674
+ Added a RD doc.
1675
+ Thu Sep 18 2003 T Horinouchi
1676
+ * gphys-0.2.0 released
1677
+ * doc/grads_gridded.html: (generated from grads_gridded.rb)
1678
+ * gphys.rb,grid.rb,varray.rb,ggraph.rb: added 3rd&4th args to "eval"
1679
+ for backtrace
1680
+ Tue Sep 16 2003 R Mizuta
1681
+ * gphys_grads_io.rb: (created)
1682
+ * varraygrads.rb: (created)
1683
+ * grads_gridded.rb: (created) classes for GrADS gridded datasets
1684
+ * testdata/T.jan.dat: (created) GrADS binary data
1685
+ * testdata/T.jan.ctl: (created) GrADS control file for T.jan.dat
1686
+ Wed Sep 3 2003 T Horinouchi
1687
+ * gphys.rb: modified GPhys#axis, GPhys#coord to support spec by name
1688
+ * varray.rb: added VArray#file
1689
+ * varraynetcdf.rb: added VArrayNetCDF#file
1690
+ Tue Sep 2 2003 T Horinouchi
1691
+ * gphys-0.1.0 released
1692
+ * sample/druby_serv2.rb: enhanced to accept a port specified
1693
+ * sample/druby_cli2.rb: changed to use the current GGraph.
1694
+ Fri Aug 29 2003 T Horinouchi
1695
+ * axis.rb: renamed Axis#mean to Axis#average, Axis#integ to
1696
+ Axis#integrate (thus renaming Grid#mean and GPhys#mean
1697
+ to Grid#average and GPhys#average and so on). Test programs are
1698
+ changed accordingly (axis.rb, grid.rb, gphys.rb, ggraph.rb,
1699
+ and ggraph_old.rb).
1700
+ * gphys.rb: GPhys#coord added (coord(i) is same as axis(i).pos)
1701
+ * grid.rb,gphys.rb: renamed collapsed_axes to lost_axes
1702
+ * varray.rb: set VArray#attr private. Defined VArray#(set|get)_att
1703
+ VArray#att_names. Aso changed corresponding to this change are
1704
+ varraynetcdf.rb, axis.rb, coordtransform.rb, grid.rb
1705
+ gphys_netcdf_io.rb, varraycomposite.rb, ggraph.rb ggraph_old.rb
1706
+ * varray.rb: added type1 methods such as sort and type2 methods
1707
+ such as mean, min, max. (type2 had been supported)
1708
+ Changed gphys.rb accordingly.
1709
+ * gphys.rb: made GPhys#grid protected
1710
+ Thu Aug 28 2003 T Horinouchi
1711
+ * grid.rb: modified Grid::[] to support the rubber dimension
1712
+ * gphys.rb: modified GPhys::[] & []= to support the rubber dimension
1713
+ Thu Aug 28 2003 T Horinouchi
1714
+ * gphys-0.0.6 released
1715
+ Wed Aug 27 2003 T Horinouchi
1716
+ * gphys.rb: added RD indexes
1717
+ * ggraph.rb: further built and documentation written. Now it has
1718
+ a basic graphic functionality.
1719
+ Tue Aug 26 2003 T Horinouchi
1720
+ * axis.rb: refined Axis#[] (no change in behavior). added Axis#cut*
1721
+ * grid.rb: modified Grid#cut* to depend on Axis#cut*
1722
+ * ggraph.rb: further built
1723
+ Mon Aug 25 2003 T Horinouchi
1724
+ * gphys.rb: added GPhys#cut*
1725
+ * grid.rb: slightly editted
1726
+ Mon Aug 25 2003 T Horinouchi
1727
+ * gphys-0.0.5 released
1728
+ * ggraph.rb: slightly enhanced (still underconstruction)
1729
+ Fri Aug 22 2003 T Horinouchi
1730
+ * varray.rb: debug VArray#inspect
1731
+ * grid.rb: added Grid#cut, Grid#cut_rank_conserving
1732
+ * ggraph.rb: enhanced (with many changes; but still underconstruction)
1733
+ Wed Aug 20 2003 T Horinouchi
1734
+ * gphys.rb: added methods axis and collapsed_axes, so that one
1735
+ does not have to put like gphys.grid.axis(1). Also added is
1736
+ rank, which of course must be.
1737
+ * grid.rb: renamed collapsed to collapsed_axes. Updated.
1738
+ * ggraph.rb: slightly modified (still underconstruction)
1739
+ * ggraph_old.rb: Updated
1740
+ Tue Aug 19 2003 T Horinouchi
1741
+ * sample/druby_cli1.rb,sample/druby_serv1.rb: updated
1742
+ * sample/druby_cli2.rb,sample/druby_serv2.rb: created
1743
+ Sun Aug 11 2003 T Horinouchi
1744
+ * gphys-0.0.4 released
1745
+ * varray.rb: added documentation; minor changes
1746
+ * varraynetcdf.rb,varraycomposite.rb: minor changes
1747
+ Sun Aug 10 2003 T Horinouchi
1748
+ * varraycomposite.rb: made to realize a composite VArray class
1749
+ VArrayComposite.
1750
+ Fri Aug 8 2003 T Horinouchi
1751
+ * varray.rb: minor change in inspect.
1752
+ * axis.rb: change implimentation of Axis#mean and Axis#integ
1753
+ --- to simplify the source code and not to use Proc.
1754
+ Also, use of the observer pattern to notify addion of similar
1755
+ methods was eliminated, so to add some has to be done before
1756
+ Grid or GPhys is loaded.
1757
+ * grid.rb,gphys.rb: minor changes corresponding to the change in
1758
+ axis.rb (see above).
1759
+ Mon Jun 23 2003 T Horinouchi
1760
+ * gphys-0.0.3 released (although the revision is still
1761
+ underway)
1762
+ * start CVS
1763
+ Jun 12-23 2003 T Horinouchi
1764
+ * Many updates such as direcotry reorganization, addition of
1765
+ coord*.rb, debug, etc.etc.
1766
+ Wed Jun 11 2003 T Horinouchi
1767
+ * axis.rb: loc -> pos
1768
+ * grid.rb: delete attr_reader axes and define axis/set_axis methods
1769
+ * gphys_netcdf_io.rb: define write
1770
+ Mon Jun 9 2003 T Horinouchi
1771
+ * axis.rb,grid.rb,gphys.rb: define copy (I will probably change
1772
+ the name). This is to make a deep clone, which possbly read
1773
+ data in a file (or files) and store them on memoty.
1774
+ Sun Jun 8 2003 T Horinouchi
1775
+ * ggraph.rb: saved and start writing from scratch (far from completed)
1776
+ Wed May 14 2003 T Horinouchi
1777
+ * gphys-0.0.2 released