gfdnavi 1.3.0.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- data/ChangeLog +10949 -0
- data/LICENCE.txt +57 -0
- data/Makefile +18 -0
- data/TODO +132 -0
- data/app/controllers/analysis_controller.rb +700 -0
- data/app/controllers/application.rb +41 -0
- data/app/controllers/draw_method_controller.rb +172 -0
- data/app/controllers/explorer_controller.rb +197 -0
- data/app/controllers/finder_controller.rb +331 -0
- data/app/controllers/function_controller.rb +204 -0
- data/app/controllers/group_controller.rb +115 -0
- data/app/controllers/keyword_attributes_controller.rb +52 -0
- data/app/controllers/knowledge_controller.rb +928 -0
- data/app/controllers/nodes_controller.rb +515 -0
- data/app/controllers/search_controller.rb +341 -0
- data/app/controllers/user_controller.rb +337 -0
- data/app/helpers/analysis_helper.rb +2 -0
- data/app/helpers/application_helper.rb +105 -0
- data/app/helpers/description_helper.rb +2 -0
- data/app/helpers/function_helper.rb +2 -0
- data/app/helpers/group_helper.rb +2 -0
- data/app/helpers/search_helper.rb +3 -0
- data/app/helpers/user_helper.rb +2 -0
- data/app/helpers/work_flow_helper.rb +92 -0
- data/app/models/actual_file.rb +3 -0
- data/app/models/analysis.rb +715 -0
- data/app/models/analysis_history.rb +42 -0
- data/app/models/cross_array.rb +22 -0
- data/app/models/cross_result.rb +254 -0
- data/app/models/derived_spatial_attribute.rb +3 -0
- data/app/models/diagram_cache.rb +16 -0
- data/app/models/diagram_cache_datum.rb +4 -0
- data/app/models/diagram_cache_session.rb +8 -0
- data/app/models/directory.rb +21 -0
- data/app/models/draw_method.rb +48 -0
- data/app/models/draw_method_attribute.rb +8 -0
- data/app/models/draw_parameter.rb +12 -0
- data/app/models/explorer_query.rb +354 -0
- data/app/models/explorer_result.rb +312 -0
- data/app/models/function.rb +75 -0
- data/app/models/function_argument.rb +6 -0
- data/app/models/function_output.rb +4 -0
- data/app/models/group.rb +153 -0
- data/app/models/image.rb +20 -0
- data/app/models/keyword_attribute.rb +179 -0
- data/app/models/knowledge.rb +94 -0
- data/app/models/knowledge_backup.rb +32 -0
- data/app/models/knowledge_figure.rb +16 -0
- data/app/models/knowledge_figure_backup.rb +16 -0
- data/app/models/knowledge_parser.rb +392 -0
- data/app/models/node.rb +605 -0
- data/app/models/node_entity_abstract.rb +112 -0
- data/app/models/node_lineage.rb +6 -0
- data/app/models/node_relation.rb +4 -0
- data/app/models/path_node.rb +60 -0
- data/app/models/query.rb +193 -0
- data/app/models/query_history.rb +12 -0
- data/app/models/results.rb +48 -0
- data/app/models/sign_up_user.rb +25 -0
- data/app/models/spatial_and_time_attribute.rb +11 -0
- data/app/models/user.rb +115 -0
- data/app/models/user_mailer.rb +48 -0
- data/app/models/value_type.rb +3 -0
- data/app/models/variable.rb +70 -0
- data/app/models/virtual_node.rb +457 -0
- data/app/views/analysis/__help_analysis_tab.en.html +57 -0
- data/app/views/analysis/__help_draw_share.en.html +12 -0
- data/app/views/analysis/__help_draw_tab.en.html +6 -0
- data/app/views/analysis/_analysis_function_settings.rhtml +61 -0
- data/app/views/analysis/_analysis_settings.rhtml +28 -0
- data/app/views/analysis/_diagram.rhtml +70 -0
- data/app/views/analysis/_dimension_option.rhtml +59 -0
- data/app/views/analysis/_draw_general_settings.rhtml +217 -0
- data/app/views/analysis/_draw_settings.rhtml +73 -0
- data/app/views/analysis/_history.rhtml +19 -0
- data/app/views/analysis/_popular_diagrams.rhtml +42 -0
- data/app/views/analysis/_save_form.rhtml +44 -0
- data/app/views/analysis/_variables.rhtml +66 -0
- data/app/views/analysis/_variables_order.rhtml +56 -0
- data/app/views/analysis/index.rhtml +195 -0
- data/app/views/analysis/preview.rhtml +3 -0
- data/app/views/analysis/save.rhtml +73 -0
- data/app/views/analysis/show_diagram.rhtml +42 -0
- data/app/views/cross/_display_map.rhtml +201 -0
- data/app/views/cross/_result.rhtml +205 -0
- data/app/views/cross/_show_result_tree.rhtml +40 -0
- data/app/views/cross/_show_results.rhtml +80 -0
- data/app/views/cross/_style.rhtml +21 -0
- data/app/views/cross/index.rhtml +271 -0
- data/app/views/draw_method/_edit_form.rhtml +110 -0
- data/app/views/draw_method/create.rhtml +8 -0
- data/app/views/draw_method/details.rhtml +113 -0
- data/app/views/draw_method/edit.rhtml +8 -0
- data/app/views/draw_method/list.rhtml +80 -0
- data/app/views/explorer/_display_map.rhtml +199 -0
- data/app/views/explorer/_show_result_tree.rhtml +40 -0
- data/app/views/explorer/_show_results.rhtml +101 -0
- data/app/views/explorer/_style.rhtml +21 -0
- data/app/views/explorer/index.rhtml +214 -0
- data/app/views/finder/_children.html.erb +84 -0
- data/app/views/finder/_children_details.html.erb +74 -0
- data/app/views/finder/_children_details_tr.html.erb +196 -0
- data/app/views/finder/create_tree.html.erb +15 -0
- data/app/views/finder/flex.html.erb +52 -0
- data/app/views/finder/index.html.erb +47 -0
- data/app/views/finder/show_details.html.erb +3 -0
- data/app/views/finder/show_images.html.erb +3 -0
- data/app/views/function/_edit_form.rhtml +106 -0
- data/app/views/function/create.rhtml +8 -0
- data/app/views/function/details.rhtml +96 -0
- data/app/views/function/edit.rhtml +8 -0
- data/app/views/function/list.rhtml +80 -0
- data/app/views/group/add_member.rhtml +13 -0
- data/app/views/group/change_owner.rhtml +15 -0
- data/app/views/group/create.rhtml +11 -0
- data/app/views/group/delete_member.rhtml +14 -0
- data/app/views/group/list.rhtml +63 -0
- data/app/views/knowledge/_backup.rhtml +135 -0
- data/app/views/knowledge/_category.rhtml +58 -0
- data/app/views/knowledge/_category_list.rhtml +34 -0
- data/app/views/knowledge/_category_table.rhtml +23 -0
- data/app/views/knowledge/_comment.rhtml +64 -0
- data/app/views/knowledge/_comment_input_form.rhtml +19 -0
- data/app/views/knowledge/_comments.rhtml +84 -0
- data/app/views/knowledge/_form.rhtml +139 -0
- data/app/views/knowledge/_group_figure_form.rhtml +187 -0
- data/app/views/knowledge/_layout_figure.rhtml +61 -0
- data/app/views/knowledge/_layout_figures_in_a_row_above_text.rhtml +42 -0
- data/app/views/knowledge/_layout_figures_under_text.rhtml +45 -0
- data/app/views/knowledge/_layout_one_figure_above_text.rhtml +28 -0
- data/app/views/knowledge/_summary.rhtml +21 -0
- data/app/views/knowledge/edit.rhtml +37 -0
- data/app/views/knowledge/list.rhtml +287 -0
- data/app/views/knowledge/new.rhtml +23 -0
- data/app/views/knowledge/new_from_analysis.rhtml +21 -0
- data/app/views/knowledge/show.rhtml +196 -0
- data/app/views/layouts/gfdnavi.rhtml +105 -0
- data/app/views/nodes/_ancestors.html.erb +89 -0
- data/app/views/nodes/_description_methods_table.html.erb +75 -0
- data/app/views/nodes/_mode.html.erb +16 -0
- data/app/views/nodes/description.html.erb +181 -0
- data/app/views/nodes/description_methods.html.erb +1 -0
- data/app/views/nodes/edit.html.erb +73 -0
- data/app/views/nodes/index.html.erb +25 -0
- data/app/views/nodes/show.html.erb +20 -0
- data/app/views/search/_children_details_mapsearch.rhtml +68 -0
- data/app/views/search/_children_details_tr.rhtml +205 -0
- data/app/views/search/_show_grouplist.rhtml +74 -0
- data/app/views/search/_show_results.rhtml +43 -0
- data/app/views/search/_show_results_global.rhtml +36 -0
- data/app/views/search/_show_results_partial.rhtml +39 -0
- data/app/views/search/_show_results_partial_groupbyfile.rhtml +50 -0
- data/app/views/search/_show_variablelist.rhtml +28 -0
- data/app/views/search/mapsearch.rhtml +176 -0
- data/app/views/search/remapsearch.rjs +18 -0
- data/app/views/search/show_details.rhtml +3 -0
- data/app/views/user/add_user.rhtml +30 -0
- data/app/views/user/change_password.rhtml +25 -0
- data/app/views/user/edit.html.erb +50 -0
- data/app/views/user/index.rhtml +162 -0
- data/app/views/user/login.rhtml +41 -0
- data/app/views/user/logout.rhtml +4 -0
- data/app/views/user/signup.rhtml +36 -0
- data/app/views/user/signup_succeeded.rhtml +36 -0
- data/app/views/user_mailer/authorization_inform.rhtml +15 -0
- data/app/views/user_mailer/signup_accepted.rhtml +12 -0
- data/app/views/user_mailer/signup_confirm.rhtml +14 -0
- data/app/views/user_mailer/signup_inform.rhtml +13 -0
- data/app/views/user_mailer/signup_rejected.rhtml +11 -0
- data/app/views/work_flow/_push_wsdls.rhtml +55 -0
- data/app/views/work_flow/index.rhtml +46 -0
- data/config/database.yml.example +35 -0
- data/config/environment.rb +68 -0
- data/config/gfdnavi.yml.example +95 -0
- data/config/load_config.rb +151 -0
- data/config/routes.rb +35 -0
- data/consistency_checker.rb +129 -0
- data/data/gfdnavi_docs/how_to_draw_multiple_images.knlge +68 -0
- data/data/gfdnavi_docs/how_to_knowledge.knlge +138 -0
- data/data/gfdnavi_docs/how_to_write_document_about_Gfdnavi.knlge +30 -0
- data/data/samples/jmadata.SIGEN +8 -0
- data/data/samples/jmadata.yml +6 -0
- data/data/samples/jmadata/MSM-P/2006.nc.yml +2 -0
- data/data/samples/jmadata/MSM-P/2006.yml +17 -0
- data/data/samples/jmadata/MSM-P/2006/0101.nc +0 -0
- data/data/samples/jmadata/MSM-P/2006/0101.nc.yml +13 -0
- data/data/samples/jmadata/MSM-P/2006/0102.nc +0 -0
- data/data/samples/jmadata/MSM-P/2006/0103.nc +0 -0
- data/data/samples/jmadata/MSM-P/2006/0104.nc +0 -0
- data/data/samples/jmadata/MSM-P/2006/0105.nc +0 -0
- data/data/samples/jmadata/MSM-P/2006/010[1-3].nc.yml +2 -0
- data/data/samples/jmadata/MSM-P/2006/skip_data.rb +96 -0
- data/data/samples/jmadata/MSM-P/2006/skip_data.sh +6 -0
- data/data/samples/reanalysis.SIGEN +8 -0
- data/data/samples/reanalysis/era40.SIGEN +8 -0
- data/data/samples/reanalysis/era40.yml +2 -0
- data/data/samples/reanalysis/era40/t.jan.nc +0 -0
- data/data/samples/reanalysis/era40/t.jan.nc.yml +1 -0
- data/data/samples/reanalysis/ncep.SIGEN +9 -0
- data/data/samples/reanalysis/ncep/T.jan.100hPa.png +0 -0
- data/data/samples/reanalysis/ncep/T.jan.100hPa.png.yml +43 -0
- data/data/samples/reanalysis/ncep/T.jan.nc +0 -0
- data/data/samples/reanalysis/ncep/T.jan.zonal_mean.nc +0 -0
- data/data/samples/reanalysis/ncep/T.jan.zonal_mean.nc.yml +8 -0
- data/data/samples/reanalysis/ncep/T.jan_only_root.nc +0 -0
- data/data/samples/reanalysis/ncep/T.jan_only_root.nc.yml +4 -0
- data/data/samples/reanalysis/ncep/UV.jan.nc +0 -0
- data/data/samples/reanalysis/ncep/UV.jan.nc.yml +10 -0
- data/data/samples/reanalysis/ncep/UV.jan.nc.yml.ja +11 -0
- data/data/samples/sonde_operational.yml +5 -0
- data/data/samples/sonde_operational/std_plev.yml +12 -0
- data/data/samples/sonde_operational/std_plev/41256.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/42410.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/43333.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/43346.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/48698.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/61641.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/63741.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/67083.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/72261.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/76805.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/82193.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/91165.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/91610.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/91948.spl.nc +0 -0
- data/data/samples/sonde_operational/std_plev/94294.spl.nc +0 -0
- data/db/NetCDFparser.rb +406 -0
- data/db/create_derived_spatial_attributes.sql +12 -0
- data/db/draw_methods/line.yml +6 -0
- data/db/draw_methods/scatter.yml +38 -0
- data/db/draw_methods/tone.yml +64 -0
- data/db/draw_methods/vector.yml +19 -0
- data/db/dump_db.rb +43 -0
- data/db/functions/additions.yml +10 -0
- data/db/functions/cut.yml +10 -0
- data/db/functions/division.yml +10 -0
- data/db/functions/mean.yml +28 -0
- data/db/functions/multiplication.yml +10 -0
- data/db/functions/stddev.yml +28 -0
- data/db/functions/subtraction.yml +10 -0
- data/db/migrate/001_initial_scheme.rb +289 -0
- data/db/migrate/002_add_open_id_authentication_tables.rb +20 -0
- data/db/register_directory_tree.rb +760 -0
- data/db/restore_db.rb +60 -0
- data/gfdnavi-install +828 -0
- data/install.rb +828 -0
- data/lib/activerecord_gfdnavi.rb +31 -0
- data/lib/basic_authorization.rb +50 -0
- data/lib/create_activeresources.rb +108 -0
- data/lib/execute_analysis.rb +472 -0
- data/lib/file_gfdnavi.rb +38 -0
- data/lib/gphys_gfdnavi.rb +81 -0
- data/lib/localdir.rb +110 -0
- data/lib/login_system.rb +110 -0
- data/lib/multibytes.rb +20 -0
- data/lib/narray_yaml.rb +58 -0
- data/lib/no_rdb_base.rb +40 -0
- data/lib/opendapdir.rb +171 -0
- data/lib/tar.rb +127 -0
- data/lib/tasks/clean.rake +65 -0
- data/lib/tasks/setup.rake +316 -0
- data/lib/tasks/update.rake +62 -0
- data/lib/vizshot_gfdnavi.rb +224 -0
- data/public/crossdomain.xml +4 -0
- data/public/flex/NodeTreeDescriptor.as +55 -0
- data/public/flex/TreeNode.as +253 -0
- data/public/flex/finder.mxml +304 -0
- data/public/flex/finder.swf +0 -0
- data/public/flex/gfdnavi.mxml +52 -0
- data/public/flex/gfdnavi.swf +0 -0
- data/public/images/Help_S-shots/dir_tree_with_add.jpg +0 -0
- data/public/images/analyze.gif +0 -0
- data/public/images/circle.gif +0 -0
- data/public/images/create_from_analysis_button.png +0 -0
- data/public/images/delete.png +0 -0
- data/public/images/down.png +0 -0
- data/public/images/drawbutton.gif +0 -0
- data/public/images/gfdnavi_home_logo.png +0 -0
- data/public/images/gfdnavi_logo_big.png +0 -0
- data/public/images/gfdnavi_logo_med.png +0 -0
- data/public/images/gfdnavi_logo_mini.png +0 -0
- data/public/images/gfdnavi_logo_nobg_big.png +0 -0
- data/public/images/gfdnavi_logo_nobg_med.png +0 -0
- data/public/images/gfdnavi_logo_nobg_small.png +0 -0
- data/public/images/gfdnavi_logo_small.png +0 -0
- data/public/images/gfdnavi_logo_xsmall.png +0 -0
- data/public/images/hbar.png +0 -0
- data/public/images/helpmark16.png +0 -0
- data/public/images/helpmark18.png +0 -0
- data/public/images/kikyu_g.gif +0 -0
- data/public/images/kikyu_r.gif +0 -0
- data/public/images/map_icon_g.gif +0 -0
- data/public/images/map_icon_r.gif +0 -0
- data/public/images/new_knowledge.png +0 -0
- data/public/images/openid.png +0 -0
- data/public/images/read_in_the_form.png +0 -0
- data/public/images/slider_f.gif +0 -0
- data/public/images/slider_f_red.gif +0 -0
- data/public/images/star1.gif +0 -0
- data/public/images/star2.gif +0 -0
- data/public/images/startanim.gif +0 -0
- data/public/images/stopanim.gif +0 -0
- data/public/images/tree/DL.png +0 -0
- data/public/images/tree/anal_viz.png +0 -0
- data/public/images/tree/analyze_visualize_checked_items.png +0 -0
- data/public/images/tree/binary.png +0 -0
- data/public/images/tree/details.png +0 -0
- data/public/images/tree/download_checked_items.png +0 -0
- data/public/images/tree/folder.png +0 -0
- data/public/images/tree/folder_close.gif +0 -0
- data/public/images/tree/image2.png +0 -0
- data/public/images/tree/knowledge.png +0 -0
- data/public/images/tree/knowledges.png +0 -0
- data/public/images/tree/last.gif +0 -0
- data/public/images/tree/last.png +0 -0
- data/public/images/tree/minus.gif +0 -0
- data/public/images/tree/minus_simple.gif +0 -0
- data/public/images/tree/none.gif +0 -0
- data/public/images/tree/none.png +0 -0
- data/public/images/tree/plus.gif +0 -0
- data/public/images/tree/plus_simple.gif +0 -0
- data/public/images/tree/show.png +0 -0
- data/public/images/tree/show_checked_items.png +0 -0
- data/public/images/tree/t.gif +0 -0
- data/public/images/tree/t.png +0 -0
- data/public/images/tree/tate.gif +0 -0
- data/public/images/tree/tate.png +0 -0
- data/public/images/up.png +0 -0
- data/public/images/vbar.png +0 -0
- data/public/images/white.bmp +0 -0
- data/public/images/x.gif +0 -0
- data/public/index.html +100 -0
- data/public/javascripts/AC_OETags.js +269 -0
- data/public/javascripts/analysis.js +751 -0
- data/public/javascripts/application.js +29 -0
- data/public/javascripts/directory_tree.js +102 -0
- data/public/javascripts/draw_method.js +83 -0
- data/public/javascripts/excanvas.js +704 -0
- data/public/javascripts/function.js +107 -0
- data/public/javascripts/gfdnavi.js +175 -0
- data/public/javascripts/knowledge.js +384 -0
- data/public/javascripts/mapsearch.js +313 -0
- data/public/javascripts/progress.js +42 -0
- data/public/javascripts/resizable_box.js +164 -0
- data/public/javascripts/slider.js +260 -0
- data/public/javascripts/tab.js +17 -0
- data/public/javascripts/work_flow.js +452 -0
- data/public/stylesheets/analysis.css +111 -0
- data/public/stylesheets/description.css +71 -0
- data/public/stylesheets/gfdnavi.css +141 -0
- data/public/stylesheets/knowledge.css +218 -0
- data/public/stylesheets/search.css +184 -0
- data/public/stylesheets/tree.css +45 -0
- data/public/stylesheets/tree_for_ie.css +3 -0
- data/public/stylesheets/work_flow.css +78 -0
- data/script/cleaner +11 -0
- data/script/server_ssl +131 -0
- data/test/fixtures/diagram_cache_data.yml +5 -0
- data/test/fixtures/diagram_cache_sessions.yml +6 -0
- data/test/fixtures/diagram_caches.yml +6 -0
- data/test/fixtures/directories.yml +57 -0
- data/test/fixtures/draw_parameters.yml +6 -0
- data/test/fixtures/function_arguments.yml +15 -0
- data/test/fixtures/function_outputs.yml +15 -0
- data/test/fixtures/functions.yml +29 -0
- data/test/fixtures/group_members.yml +33 -0
- data/test/fixtures/groups.yml +25 -0
- data/test/fixtures/images.yml +12 -0
- data/test/fixtures/keyword_attributes.yml +73 -0
- data/test/fixtures/knowledges.yml +10 -0
- data/test/fixtures/node_relations.yml +11 -0
- data/test/fixtures/nodes.yml +298 -0
- data/test/fixtures/sign_up_users.yml +8 -0
- data/test/fixtures/spatial_and_time_attributes.yml +29 -0
- data/test/fixtures/user_mailer/authorization_inform +11 -0
- data/test/fixtures/user_mailer/signup_accepted +10 -0
- data/test/fixtures/user_mailer/signup_confirm +17 -0
- data/test/fixtures/user_mailer/signup_inform +10 -0
- data/test/fixtures/user_mailer/signup_rejected +9 -0
- data/test/fixtures/users.yml +31 -0
- data/test/fixtures/value_types.yml +10 -0
- data/test/fixtures/variables.yml +17 -0
- data/test/functional/analysis_controller_test.rb +169 -0
- data/test/functional/description_controller_test.rb +18 -0
- data/test/functional/function_controller_test.rb +18 -0
- data/test/functional/group_controller_test.rb +18 -0
- data/test/functional/search_controller_test.rb +83 -0
- data/test/functional/user_controller_test.rb +77 -0
- data/test/functional/webservice_analysis_api_test.rb +12 -0
- data/test/functional/work_flow_controller_test.rb +18 -0
- data/test/test_helper.rb +28 -0
- data/test/unit/diagram_cache_datum_test.rb +10 -0
- data/test/unit/diagram_cache_session_test.rb +10 -0
- data/test/unit/diagram_cache_test.rb +10 -0
- data/test/unit/directory_test.rb +49 -0
- data/test/unit/draw_parameter_test.rb +10 -0
- data/test/unit/function_argument_test.rb +10 -0
- data/test/unit/function_output_test.rb +10 -0
- data/test/unit/function_test.rb +10 -0
- data/test/unit/group_test.rb +48 -0
- data/test/unit/image_test.rb +13 -0
- data/test/unit/keyword_attribute_test.rb +33 -0
- data/test/unit/knowledge_test.rb +13 -0
- data/test/unit/node_relation_test.rb +20 -0
- data/test/unit/node_test.rb +85 -0
- data/test/unit/sign_up_user_test.rb +20 -0
- data/test/unit/spatial_and_time_attribute_test.rb +29 -0
- data/test/unit/user_mailer_test.rb +101 -0
- data/test/unit/user_test.rb +134 -0
- data/test/unit/value_type_test.rb +10 -0
- data/test/unit/variable_test.rb +35 -0
- data/vendor/plugins/acts_as_list/README +23 -0
- data/vendor/plugins/acts_as_list/init.rb +3 -0
- data/vendor/plugins/acts_as_list/lib/active_record/acts/list.rb +256 -0
- data/vendor/plugins/acts_as_list/test/list_test.rb +332 -0
- data/vendor/plugins/acts_as_tree/README +26 -0
- data/vendor/plugins/acts_as_tree/Rakefile +22 -0
- data/vendor/plugins/acts_as_tree/init.rb +1 -0
- data/vendor/plugins/acts_as_tree/lib/active_record/acts/tree.rb +96 -0
- data/vendor/plugins/acts_as_tree/test/abstract_unit.rb +0 -0
- data/vendor/plugins/acts_as_tree/test/acts_as_tree_test.rb +219 -0
- data/vendor/plugins/acts_as_tree/test/database.yml +0 -0
- data/vendor/plugins/acts_as_tree/test/fixtures/mixin.rb +0 -0
- data/vendor/plugins/acts_as_tree/test/fixtures/mixins.yml +0 -0
- data/vendor/plugins/acts_as_tree/test/schema.rb +0 -0
- data/vendor/plugins/will_paginate/CHANGELOG +92 -0
- data/vendor/plugins/will_paginate/LICENSE +18 -0
- data/vendor/plugins/will_paginate/README.rdoc +131 -0
- data/vendor/plugins/will_paginate/Rakefile +62 -0
- data/vendor/plugins/will_paginate/examples/apple-circle.gif +0 -0
- data/vendor/plugins/will_paginate/examples/index.haml +69 -0
- data/vendor/plugins/will_paginate/examples/index.html +92 -0
- data/vendor/plugins/will_paginate/examples/pagination.css +90 -0
- data/vendor/plugins/will_paginate/examples/pagination.sass +91 -0
- data/vendor/plugins/will_paginate/init.rb +1 -0
- data/vendor/plugins/will_paginate/lib/will_paginate.rb +86 -0
- data/vendor/plugins/will_paginate/lib/will_paginate/array.rb +16 -0
- data/vendor/plugins/will_paginate/lib/will_paginate/collection.rb +145 -0
- data/vendor/plugins/will_paginate/lib/will_paginate/core_ext.rb +32 -0
- data/vendor/plugins/will_paginate/lib/will_paginate/finder.rb +247 -0
- data/vendor/plugins/will_paginate/lib/will_paginate/named_scope.rb +132 -0
- data/vendor/plugins/will_paginate/lib/will_paginate/named_scope_patch.rb +39 -0
- data/vendor/plugins/will_paginate/lib/will_paginate/version.rb +9 -0
- data/vendor/plugins/will_paginate/lib/will_paginate/view_helpers.rb +373 -0
- data/vendor/plugins/will_paginate/will_paginate.gemspec +21 -0
- metadata +586 -0
|
@@ -0,0 +1,105 @@
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# Methods added to this helper will be available to all templates in the application.
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2
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module ApplicationHelper
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3
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4
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@@locale = 'en' # or 'ja' etc etc
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def self.locale= (locale)
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@@locale = locale
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end
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8
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9
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def render_erb(src)
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::ERB.new(src).result(binding)
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end
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def relative_url_root
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if ActionController::Base.respond_to?(:relative_url_root)
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# for >= 2.2.2
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return ActionController::Base.relative_url_root || ""
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elsif controller.request.respond_to?(:relative_url_root)
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# for < 2.2.2
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return controller.request.relative_url_root
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else
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raise "bug"
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end
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end
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def help_popup(html_file_partial)
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if base_path
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dir = File.join(base_path, controller.controller_name)
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elsif defined?(finder)
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dir = File.join(finder.view_paths[0], controller.controller_name)
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else
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dir = File.join(view_paths.to_a[0], controller.controller_name)
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end
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33
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prefix = dir + '/__help_' + html_file_partial
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34
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if File.exists?( path = prefix+'.'+@@locale+'.html' ) ||
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File.exists?( path = prefix+'.html' ) ||
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File.exists?( path = prefix+'.en.html' )
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help_text = File.read( path )
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38
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else
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39
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help_text = '[BUG] Sorry, no help text was found for '+html_file_partial
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40
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end
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41
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42
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html =<<-EOS
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<label id='#{'help_'+html_file_partial}' style="cursor:pointer">
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#{image_tag('helpmark16.png', :title=>'Help')}
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</label>
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46
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<script>
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new PopupMenu('#{'help_'+html_file_partial}',
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'#{escape_javascript(help_text)}',
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'Help' );
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</script>
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51
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EOS
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html
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53
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end
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54
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55
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def host_information_table
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56
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request = controller.request
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57
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html =<<-"EOS"
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58
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<table>
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59
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<tr><td>Host</td><td>#{request.host_with_port}</td></tr>
|
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60
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<tr><td>Gfdnavi Root</td><td>/#{request.relative_url_root}</td></tr>
|
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61
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<tr><td>Path</td><td>#{request.path}</td></tr>
|
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62
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<tr><td>Env</td><td>#{RAILS_ENV}</td></tr>
|
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63
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<tr><td>Server Software</td><td>#{request.server_software}</td></tr>
|
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64
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+
</table>
|
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65
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EOS
|
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66
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return html
|
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67
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+
end
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68
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|
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69
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def image_path(obj)
|
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70
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case obj
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71
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+
when Image, Node
|
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72
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+
data_dl_url(:path => obj.path.sub(/^\//,""))
|
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73
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+
when DiagramCache
|
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74
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+
url_for(:controller => 'analysis', :action => 'show_image', :id => obj.id)
|
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75
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+
when String
|
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76
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image_tag(obj)
|
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77
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else
|
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78
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nil
|
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79
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+
end
|
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80
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+
end
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81
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+
|
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82
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+
def tree_lines(dir, user, first=true)
|
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83
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lines = ""
|
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84
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+
if (parent = dir.parent)
|
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85
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+
if parent.directory_nodes(:user=>user)[-1] == dir
|
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86
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if first
|
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87
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type = "last"
|
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88
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else
|
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89
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type = "none"
|
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90
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end
|
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91
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else
|
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92
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if first
|
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93
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type = "t"
|
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94
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else
|
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95
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|
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96
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type = "tate"
|
|
97
|
+
end
|
|
98
|
+
end
|
|
99
|
+
lines += tree_lines(parent, user, false)
|
|
100
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+
lines += image_tag("tree/#{type}.gif", :border => "0", :align => "middle", :class => "tree")+"<span class=\"tree\">\n</span>"
|
|
101
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+
end
|
|
102
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return lines
|
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103
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+
end
|
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104
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+
|
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105
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+
end
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@@ -0,0 +1,92 @@
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1
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module WorkFlowHelper
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2
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+
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3
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+
def get_input_html(name, value, write_type=true)
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4
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html = ""
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5
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+
javascript = ""
|
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6
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+
if Array === value
|
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7
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ary = get_input_html(name+[0], value[0])
|
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8
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+
fname = "add_#{name.join("_")}"
|
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9
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html += "["
|
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10
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+
html += ary[0]
|
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11
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html += ", "
|
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12
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+
html += "<span class=\"link\" onclick=\"#{fname}(this);\">add</span>"
|
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13
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+
html += "]"
|
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14
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+
if ary[1]
|
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15
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+
javascript += ary[1]
|
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16
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+
end
|
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17
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+
tmp = "tmp#{name.length}"
|
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18
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+
ary = get_input_html(name+[tmp], value[0], false)
|
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19
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+
javascript +=<<"EOF"
|
|
20
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+
window.#{fname} = function(elm) {
|
|
21
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+
if (elm.count)
|
|
22
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+
elm.count += 1;
|
|
23
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+
else
|
|
24
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+
elm.count = 1;
|
|
25
|
+
new Insertion.Before(elm,'#{ary[0]}, '.gsub('#{tmp}',elm.count));
|
|
26
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+
EOF
|
|
27
|
+
if ary[1]
|
|
28
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+
javascript += " eval('#{escape_javascript(ary[1])}'.gsub('#{tmp}',elm.count));\n"
|
|
29
|
+
end
|
|
30
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+
javascript += "}\n"
|
|
31
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+
elsif Hash === value
|
|
32
|
+
html += '<ul style="margin:0">'
|
|
33
|
+
value.each{|k,v|
|
|
34
|
+
ary = get_input_html(name+[k], v)
|
|
35
|
+
html += "<li>#{k}: "
|
|
36
|
+
html += ary[0]
|
|
37
|
+
if ary[1]
|
|
38
|
+
javascript += ary[1]
|
|
39
|
+
end
|
|
40
|
+
}
|
|
41
|
+
html += '</ul>'
|
|
42
|
+
elsif value == "string"
|
|
43
|
+
if write_type
|
|
44
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+
html += "(#{value})"
|
|
45
|
+
end
|
|
46
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+
html += text_field_tag("apis[api_id][#{name.join("][")}]")
|
|
47
|
+
elsif value == "int" || value == "float" || value == "double"
|
|
48
|
+
if write_type
|
|
49
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+
html += "(#{value})"
|
|
50
|
+
end
|
|
51
|
+
html += text_field_tag("apis[api_id][#{name.join("][")}]", nil, :size=>5)
|
|
52
|
+
elsif value == "boolean"
|
|
53
|
+
html += select_tag("apis[api_id][#{name.join("][")}]", "<option></option><option>true</option><option>false</option>")
|
|
54
|
+
elsif
|
|
55
|
+
if write_type
|
|
56
|
+
html += "(#{value})"
|
|
57
|
+
end
|
|
58
|
+
html += text_field_tag("apis[api_id][#{name.join("][")}]")
|
|
59
|
+
end
|
|
60
|
+
return html, javascript=="" ? nil : javascript
|
|
61
|
+
end
|
|
62
|
+
|
|
63
|
+
def get_output_text(value, type, name="")
|
|
64
|
+
if Array === value
|
|
65
|
+
case type
|
|
66
|
+
when "html"
|
|
67
|
+
return "[#{get_output_text(value[0], type)}]"
|
|
68
|
+
when "list"
|
|
69
|
+
ary = Array.new
|
|
70
|
+
3.times{|i|
|
|
71
|
+
ary[i] = get_output_text(value[0], type, name+"[#{i}]")
|
|
72
|
+
}
|
|
73
|
+
return ary.join(",")
|
|
74
|
+
end
|
|
75
|
+
elsif Hash === value
|
|
76
|
+
case type
|
|
77
|
+
when "html"
|
|
78
|
+
return "{#{value.collect{|k,v| k+"=>"+get_output_text(v,type)}.join(", ")}}"
|
|
79
|
+
when "list"
|
|
80
|
+
return value.collect{|k,v| get_output_text(v,type,name+"[#{k}]")}.join(", ")
|
|
81
|
+
end
|
|
82
|
+
else
|
|
83
|
+
case type
|
|
84
|
+
when "html"
|
|
85
|
+
return "(#{value})"
|
|
86
|
+
when "list"
|
|
87
|
+
return "'(#{value})#{name}'"
|
|
88
|
+
end
|
|
89
|
+
end
|
|
90
|
+
end
|
|
91
|
+
|
|
92
|
+
end
|
|
@@ -0,0 +1,715 @@
|
|
|
1
|
+
require "numru/gphys"
|
|
2
|
+
require "no_rdb_base"
|
|
3
|
+
require "vizshot_gfdnavi"
|
|
4
|
+
|
|
5
|
+
class AnalysisColumn < ActiveRecord::ConnectionAdapters::Column
|
|
6
|
+
|
|
7
|
+
def type_cast_code(var_name)
|
|
8
|
+
case type
|
|
9
|
+
when :array
|
|
10
|
+
"#{self.class.name}.value_to_array(#{var_name})"
|
|
11
|
+
when :array_int
|
|
12
|
+
"#{self.class.name}.value_to_array(#{var_name}, :int)"
|
|
13
|
+
when :array_float
|
|
14
|
+
"#{self.class.name}.value_to_array(#{var_name}, :float)"
|
|
15
|
+
when :model
|
|
16
|
+
"#{self.class.name}.value_to_model(#{var_name})"
|
|
17
|
+
else
|
|
18
|
+
super("(#{var_name}=='NULL' ? nil : #{var_name})")
|
|
19
|
+
end
|
|
20
|
+
end
|
|
21
|
+
|
|
22
|
+
def self.value_to_array(value, val_type=nil)
|
|
23
|
+
if Array === value
|
|
24
|
+
ary = value
|
|
25
|
+
elsif Hash === value
|
|
26
|
+
ary = Array.new
|
|
27
|
+
value.each{|k,v|
|
|
28
|
+
ary[k.to_i] = v
|
|
29
|
+
}
|
|
30
|
+
elsif String === value
|
|
31
|
+
ary = value.split(/,/)
|
|
32
|
+
else
|
|
33
|
+
ary = [value]
|
|
34
|
+
end
|
|
35
|
+
case val_type
|
|
36
|
+
when :int
|
|
37
|
+
ary.collect!{|v| v.to_i}
|
|
38
|
+
when :float
|
|
39
|
+
ary.collect!{|v| v.to_f}
|
|
40
|
+
end
|
|
41
|
+
return ary
|
|
42
|
+
end
|
|
43
|
+
|
|
44
|
+
def self.value_to_model(value)
|
|
45
|
+
return nil if value.nil? || value[:name].nil?
|
|
46
|
+
if Hash === value && value[:class]
|
|
47
|
+
case value[:class]
|
|
48
|
+
when "user"
|
|
49
|
+
return User.find_by_login(value[:name])
|
|
50
|
+
when "function"
|
|
51
|
+
return Function.find(:first, :conditions=>["name=?",value[:name]], :user=>value[:user])
|
|
52
|
+
when "draw_method"
|
|
53
|
+
return DrawMethod.find(:first, :conditions=>["name=?",value[:name]], :user=>value[:user])
|
|
54
|
+
end
|
|
55
|
+
else
|
|
56
|
+
raise "a model is expected"
|
|
57
|
+
end
|
|
58
|
+
end
|
|
59
|
+
|
|
60
|
+
def default
|
|
61
|
+
Array===@default ? @default.dup : @default
|
|
62
|
+
end
|
|
63
|
+
|
|
64
|
+
|
|
65
|
+
private
|
|
66
|
+
def simplified_type(type)
|
|
67
|
+
case type
|
|
68
|
+
when /array_int/i
|
|
69
|
+
:array_int
|
|
70
|
+
when /array_float/i
|
|
71
|
+
:array_float
|
|
72
|
+
when /array/i
|
|
73
|
+
:array
|
|
74
|
+
when /model/i
|
|
75
|
+
:model
|
|
76
|
+
else
|
|
77
|
+
super(type)
|
|
78
|
+
end
|
|
79
|
+
end
|
|
80
|
+
|
|
81
|
+
end
|
|
82
|
+
|
|
83
|
+
class Analysis < ActiveRecord::NoRdbBase
|
|
84
|
+
|
|
85
|
+
ACTION_TYPE = %w( draw analysis )
|
|
86
|
+
|
|
87
|
+
DRAW_PROJECTION = {1 => "rectangular uniform coordinate",
|
|
88
|
+
2 => "semi-logarithmic coordinate (y axis)",
|
|
89
|
+
3 => "semi-logarithmic coordinate (x axis)",
|
|
90
|
+
4 => "logarithmic coordinate",
|
|
91
|
+
5 => "polar coordinate",
|
|
92
|
+
6 => "bipolar coordinate",
|
|
93
|
+
# 7 => "elliptic coordinate",
|
|
94
|
+
10 => "equidistant cylindrical projection",
|
|
95
|
+
11 => "Mercator's projection",
|
|
96
|
+
12 => "Mollweide's projection",
|
|
97
|
+
13 => "Hammer's projection",
|
|
98
|
+
14 => "Eckert VI projection",
|
|
99
|
+
15 => "Kitada's elliptic projection",
|
|
100
|
+
20 => "equidistant conical projection",
|
|
101
|
+
21 => "Lambert's equal-area conical projection",
|
|
102
|
+
22 => "Lambert's conformal conical projection",
|
|
103
|
+
23 => "Bonne's projection",
|
|
104
|
+
30 => "orthographic projection",
|
|
105
|
+
31 => "polar stereo projection",
|
|
106
|
+
32 => "azimuthal equidistant projection",
|
|
107
|
+
33 => "Lambert's azimuthal equal-area projection"
|
|
108
|
+
}
|
|
109
|
+
|
|
110
|
+
DRAW_SIZE = [[700,700], [550,550], [400,400], [250,250]]
|
|
111
|
+
|
|
112
|
+
|
|
113
|
+
common_attrs =
|
|
114
|
+
[
|
|
115
|
+
{:name => "variables", :default => [], :type => "array"},
|
|
116
|
+
{:name => "action_type", :default => ACTION_TYPE.index("draw"), :type => "int"}
|
|
117
|
+
]
|
|
118
|
+
draw_attrs =
|
|
119
|
+
[
|
|
120
|
+
{:name => "draw_share", :default => true, :type => "boolean"},
|
|
121
|
+
{:name => "draw_method", :type => "model"},
|
|
122
|
+
{:name => "x_axis", :type => "string"},
|
|
123
|
+
{:name => "y_axis", :type => "string"},
|
|
124
|
+
{:name => "z_axis", :type => "string"},
|
|
125
|
+
{:name => "draw_projection", :default => 1, :type => "int"},
|
|
126
|
+
{:name => "region", :default => {}, :type => "hash"},
|
|
127
|
+
{:name => "draw_pileup", :default => false, :type => "boolean"},
|
|
128
|
+
{:name => "draw_keep", :default => false, :type => "boolean"},
|
|
129
|
+
{:name => "draw_size", :default => 1, :type => "int"},
|
|
130
|
+
{:name => "anim", :default => false, :type => "boolean", :optional => true},
|
|
131
|
+
{:name => "anim_dim", :type => "string", :optional => true},
|
|
132
|
+
{:name => "viewport", :default => "0.2, 0.8, 0.2, 0.8", :type => "array_float", :optional => true},
|
|
133
|
+
{:name => "draw_variables_order", :default => [], :type => "array", :optional => true},
|
|
134
|
+
{:name => "map", :default => false, :type => "boolean", :optional => true}
|
|
135
|
+
]
|
|
136
|
+
function_attrs =
|
|
137
|
+
[
|
|
138
|
+
{:name => "function", :type => "model"},
|
|
139
|
+
{:name => "function_arguments", :default => [], :type => "array"},
|
|
140
|
+
{:name => "function_variables_order", :default => [], :type => "array"}
|
|
141
|
+
]
|
|
142
|
+
|
|
143
|
+
@@minmaxs =
|
|
144
|
+
{
|
|
145
|
+
"action_type" => [0, ACTION_TYPE.length-1],
|
|
146
|
+
"draw_size" => [0, DRAW_SIZE.length-1]
|
|
147
|
+
}
|
|
148
|
+
|
|
149
|
+
push_column AnalysisColumn.new("user", nil, "model", true)
|
|
150
|
+
(common_attrs +
|
|
151
|
+
draw_attrs +
|
|
152
|
+
function_attrs
|
|
153
|
+
).each{ |hash|
|
|
154
|
+
push_column AnalysisColumn.new(hash[:name], hash[:default], hash[:type], hash[:optional]==true )
|
|
155
|
+
}
|
|
156
|
+
if ActiveRecord::Base.connection.tables.include?("nodes")
|
|
157
|
+
DrawMethod.find(:all, :user=>:all).each{|dm|
|
|
158
|
+
dm.draw_method_attributes.each{|dma|
|
|
159
|
+
push_column AnalysisColumn.new( "#{dm.name}_#{dma.name}", dma.default=="NULL"?nil : dma.default, dma.value_type.name, dma.optional)
|
|
160
|
+
}
|
|
161
|
+
}
|
|
162
|
+
end
|
|
163
|
+
|
|
164
|
+
def write_attribute(attr_name, value)
|
|
165
|
+
case attr_name.to_s
|
|
166
|
+
when "function"
|
|
167
|
+
unless Function === value
|
|
168
|
+
value = Function.find(:first, :conditions=>["name=?",value], :user=>user)
|
|
169
|
+
end
|
|
170
|
+
value = {:class => "function", :name => value && value.name, :user => user}
|
|
171
|
+
when "draw_method"
|
|
172
|
+
unless DrawMethod === value
|
|
173
|
+
value = DrawMethod.find(:first, :conditions=>["name=?",value], :user=>user)
|
|
174
|
+
end
|
|
175
|
+
value = {:class => "draw_method", :name => value && value.name, :user => user}
|
|
176
|
+
when "user"
|
|
177
|
+
unless User === value
|
|
178
|
+
value = User.find_by_login(value)
|
|
179
|
+
end
|
|
180
|
+
value = {:class => "user", :name => value && value.login}
|
|
181
|
+
when "draw_variables_order"
|
|
182
|
+
value = variables_order(value)
|
|
183
|
+
when "function_variables_order"
|
|
184
|
+
value = variables_order(value)
|
|
185
|
+
end
|
|
186
|
+
|
|
187
|
+
value = nil if value == "NULL"
|
|
188
|
+
|
|
189
|
+
super(attr_name, value)
|
|
190
|
+
|
|
191
|
+
if (minmax = @@minmaxs[attr_name.to_s])
|
|
192
|
+
val = read_attribute(attr_name)
|
|
193
|
+
if val < minmax[0]
|
|
194
|
+
write_attribute(attr_name, minmax[0].to_s)
|
|
195
|
+
elsif val > minmax[1]
|
|
196
|
+
write_attribute(attr_name, minmax[1].to_s)
|
|
197
|
+
end
|
|
198
|
+
end
|
|
199
|
+
xa = read_attribute("x_axis")
|
|
200
|
+
ya = read_attribute("y_axis")
|
|
201
|
+
za = read_attribute("z_axis")
|
|
202
|
+
ad = read_attribute("anim") && read_attribute("anim_dim")
|
|
203
|
+
case attr_name.to_s
|
|
204
|
+
when "x_axis"
|
|
205
|
+
=begin
|
|
206
|
+
if xa
|
|
207
|
+
if xa == ya
|
|
208
|
+
write_attribute("y_axis", nil)
|
|
209
|
+
elsif xa == za
|
|
210
|
+
write_attribute("z_axis", nil)
|
|
211
|
+
elsif xa == ad
|
|
212
|
+
write_attribute("anim_dim", nil)
|
|
213
|
+
end
|
|
214
|
+
end
|
|
215
|
+
=end
|
|
216
|
+
when "y_axis"
|
|
217
|
+
=begin
|
|
218
|
+
if ya
|
|
219
|
+
if ya == xa
|
|
220
|
+
write_attribute("x_axis", nil)
|
|
221
|
+
elsif ya == za
|
|
222
|
+
write_attribute("z_axis", nil)
|
|
223
|
+
elsif ya == ad
|
|
224
|
+
write_attribute("anim_dim", nil)
|
|
225
|
+
end
|
|
226
|
+
end
|
|
227
|
+
=end
|
|
228
|
+
when "z_axis"
|
|
229
|
+
=begin
|
|
230
|
+
if za
|
|
231
|
+
if za == xa
|
|
232
|
+
write_attribute("x_axis", nil)
|
|
233
|
+
elsif za == ya
|
|
234
|
+
write_attribute("y_axis", nil)
|
|
235
|
+
elsif ya == ad
|
|
236
|
+
write_attribute("anim_dim", nil)
|
|
237
|
+
end
|
|
238
|
+
end
|
|
239
|
+
=end
|
|
240
|
+
when "anim_dim"
|
|
241
|
+
=begin
|
|
242
|
+
if ad
|
|
243
|
+
if ad == xa
|
|
244
|
+
write_attribute("x_axis", nil)
|
|
245
|
+
elsif ad == ya
|
|
246
|
+
write_attribute("x_axis", nil)
|
|
247
|
+
elsif ad == za
|
|
248
|
+
write_attribute("z_axis", nil)
|
|
249
|
+
end
|
|
250
|
+
end
|
|
251
|
+
=end
|
|
252
|
+
when "draw_projection"
|
|
253
|
+
unless DRAW_PROJECTION[value.to_i]
|
|
254
|
+
write_attribute("draw_projection", "1")
|
|
255
|
+
end
|
|
256
|
+
when "viewport"
|
|
257
|
+
unless viewport.length==4
|
|
258
|
+
write_attribute("viewport", Analysis.columns_hash["viewport"].default)
|
|
259
|
+
end
|
|
260
|
+
end
|
|
261
|
+
end
|
|
262
|
+
|
|
263
|
+
def variables
|
|
264
|
+
user_model = user && User.find_by_login(user)
|
|
265
|
+
vars = read_attribute("variables")
|
|
266
|
+
vars.each{|var|
|
|
267
|
+
next if var.new_record?
|
|
268
|
+
unless var.other_mode==4 || ( user_model && (var.rgroups & user_model.groups) )
|
|
269
|
+
raise "an invalid variable was set"
|
|
270
|
+
end
|
|
271
|
+
}
|
|
272
|
+
return vars
|
|
273
|
+
end
|
|
274
|
+
|
|
275
|
+
def draw_methods
|
|
276
|
+
dm = read_attribute("draw_method")
|
|
277
|
+
return dm if dm.nil?
|
|
278
|
+
user_model = user && User.find_by_login(user)
|
|
279
|
+
unless dm == DrawMethod.find(:first, :conditions=>["id=>",dm.node.id], :user=>user_model)
|
|
280
|
+
raise "an invalid draw method was set"
|
|
281
|
+
end
|
|
282
|
+
return dm
|
|
283
|
+
end
|
|
284
|
+
|
|
285
|
+
def functions
|
|
286
|
+
func = read_attribute("function")
|
|
287
|
+
return func if func.nil?
|
|
288
|
+
user_model = user && User.find_by_login(user)
|
|
289
|
+
unless func == Function.find(:first, :conditions=>["id=?",func.id], :user=>user_model)
|
|
290
|
+
raise "an invalid function was set"
|
|
291
|
+
end
|
|
292
|
+
return func
|
|
293
|
+
end
|
|
294
|
+
|
|
295
|
+
|
|
296
|
+
def variable_clear
|
|
297
|
+
@dimensions = nil
|
|
298
|
+
%w( variables region x_axis y_axis z_axis draw_variables_order function_variables_order ).each{|name|
|
|
299
|
+
column = column_for_attribute(name)
|
|
300
|
+
default = column.default
|
|
301
|
+
self[name] = default
|
|
302
|
+
}
|
|
303
|
+
end
|
|
304
|
+
|
|
305
|
+
def file_and_variable_names
|
|
306
|
+
variables.collect do |var|
|
|
307
|
+
[fname, vname]
|
|
308
|
+
end
|
|
309
|
+
end
|
|
310
|
+
|
|
311
|
+
def gphyses
|
|
312
|
+
variables.collect do |var|
|
|
313
|
+
var.gphys
|
|
314
|
+
end
|
|
315
|
+
end
|
|
316
|
+
|
|
317
|
+
def dimensions
|
|
318
|
+
unless @dimensions
|
|
319
|
+
axes = Hash.new
|
|
320
|
+
@dimensions = Array.new
|
|
321
|
+
self.gphyses.each{|gp|
|
|
322
|
+
gp.rank.times do |i|
|
|
323
|
+
ax = gp.axis(i)
|
|
324
|
+
ax_name = ax.name
|
|
325
|
+
if axes[ax_name]
|
|
326
|
+
ind, units, ary = axes[ax_name]
|
|
327
|
+
pos = ax.pos
|
|
328
|
+
ary2 = pos.val
|
|
329
|
+
unless pos.units == units
|
|
330
|
+
begin
|
|
331
|
+
factor,offset = Units.new(units).factor_and_offset(Units.new(pos.units))
|
|
332
|
+
ary2 = ary*factor + offset
|
|
333
|
+
rescue
|
|
334
|
+
end
|
|
335
|
+
end
|
|
336
|
+
ary += ary2.to_a
|
|
337
|
+
ary.sort!.uniq!
|
|
338
|
+
axes[ax_name] = [ind, units, ary]
|
|
339
|
+
else
|
|
340
|
+
pos = ax.pos
|
|
341
|
+
axes[ax_name] = [axes.length, pos.units, pos.val.to_a]
|
|
342
|
+
end
|
|
343
|
+
end
|
|
344
|
+
axes.each do |name, ary|
|
|
345
|
+
@dimensions[ary[0]] = {:name => name, :units => ary[1], :ary => ary[2]}
|
|
346
|
+
end
|
|
347
|
+
}
|
|
348
|
+
end
|
|
349
|
+
return @dimensions
|
|
350
|
+
end
|
|
351
|
+
|
|
352
|
+
def index
|
|
353
|
+
dims = region
|
|
354
|
+
if region.length == 0
|
|
355
|
+
dims = Hash.new
|
|
356
|
+
dimensions.each{|dim|
|
|
357
|
+
dims[dim[:name]] = {"min"=>dim[:ary][0], "max"=>dim[:ary][-1]}
|
|
358
|
+
}
|
|
359
|
+
end
|
|
360
|
+
twoD = dimensions.length > 1
|
|
361
|
+
threeD = dimensions.length > 2
|
|
362
|
+
dim0 = dimensions[0][:name]
|
|
363
|
+
dim1 = dimensions[1][:name] if twoD
|
|
364
|
+
dim2 = dimensions[2][:name] if threeD
|
|
365
|
+
unless x_axis
|
|
366
|
+
xa = dim0
|
|
367
|
+
xa = (twoD && y_axis==xa) ? dim1 : xa
|
|
368
|
+
xa = (threeD && z_axis==xa) ? dim2 : xa
|
|
369
|
+
self.x_axis = xa
|
|
370
|
+
end
|
|
371
|
+
if twoD && !y_axis
|
|
372
|
+
ya = dim1
|
|
373
|
+
ya = x_axis==ya ? dim0 : ya
|
|
374
|
+
ya = (threeD && z_axis==ya) ? dim2 : ya
|
|
375
|
+
self.y_axis = ya
|
|
376
|
+
end
|
|
377
|
+
if threeD && !z_axis
|
|
378
|
+
za = dim2
|
|
379
|
+
za = y_axis==za ? dim1 : za
|
|
380
|
+
za = x_axis==za ? dim0 : za
|
|
381
|
+
self.z_axis = za
|
|
382
|
+
end
|
|
383
|
+
hash = Hash.new
|
|
384
|
+
dims.each do |name,range|
|
|
385
|
+
if ACTION_TYPE[action_type]=="analysis" || (name==x_axis || (draw_method.ndims>1&&name==y_axis) || (draw_method.ndims>2&&name==z_axis))
|
|
386
|
+
min = range["min"].to_f
|
|
387
|
+
max = range["max"].to_f
|
|
388
|
+
hash[name] = min==max ? min : min..max
|
|
389
|
+
else
|
|
390
|
+
hash[name] = range["min"].to_f
|
|
391
|
+
end
|
|
392
|
+
end
|
|
393
|
+
return hash
|
|
394
|
+
end
|
|
395
|
+
|
|
396
|
+
def get_vizshots(basename)
|
|
397
|
+
options = Hash.new
|
|
398
|
+
vars = variables
|
|
399
|
+
nvars = variables.length
|
|
400
|
+
if nvars == 0
|
|
401
|
+
return [false, "at least one variable must be selected"]
|
|
402
|
+
end
|
|
403
|
+
dm_nvars = draw_method.nvars
|
|
404
|
+
if nvars%dm_nvars != 0
|
|
405
|
+
return [false, "number of variable must be multiples of #{dm_nvars}"]
|
|
406
|
+
end
|
|
407
|
+
ix = get_index_from_name(x_axis)
|
|
408
|
+
iy = get_index_from_name(y_axis)
|
|
409
|
+
iz = get_index_from_name(z_axis)
|
|
410
|
+
|
|
411
|
+
options[:method] = draw_method.vizshot_method.to_sym
|
|
412
|
+
options.update( get_vizshot_options )
|
|
413
|
+
options["transpose"] = true if draw_method.ndims>1 && ix && iy && ix > iy
|
|
414
|
+
options[:cut] = index
|
|
415
|
+
|
|
416
|
+
size = Analysis::DRAW_SIZE[draw_size]
|
|
417
|
+
vizs = Array.new
|
|
418
|
+
nfig = nvars/dm_nvars
|
|
419
|
+
nfig.times{|n|
|
|
420
|
+
if dm_nvars == 2
|
|
421
|
+
options[:variables] = [ vars[draw_variables_order[n][0]].path, vars[draw_variables_order[n][1]].path ]
|
|
422
|
+
else
|
|
423
|
+
options[:variables] = [ vars[n].path ]
|
|
424
|
+
end
|
|
425
|
+
if draw_pileup && vizs[0]
|
|
426
|
+
viz = vizs[0]
|
|
427
|
+
else
|
|
428
|
+
viz = NumRu::VizShot.new(:iwidth => size[0], :iheight => size[1], :basename => basename)
|
|
429
|
+
viz.set_fig('itr' => draw_projection, 'viewport' => viewport)
|
|
430
|
+
unless draw_projection == 5
|
|
431
|
+
viz.set_tone('tonf' => true )
|
|
432
|
+
end
|
|
433
|
+
vizs.push viz
|
|
434
|
+
end
|
|
435
|
+
viz.plot( options.dup )
|
|
436
|
+
}
|
|
437
|
+
return [true, vizs]
|
|
438
|
+
end
|
|
439
|
+
|
|
440
|
+
|
|
441
|
+
|
|
442
|
+
|
|
443
|
+
def diagram_label
|
|
444
|
+
label = draw_method.name
|
|
445
|
+
label += ", #{region[x_axis][:name]}(#{region[x_axis]["min"]}:#{region[x_axis]["max"]})"
|
|
446
|
+
if draw_method.ndims > 1
|
|
447
|
+
label += " vs #{region[y_axis][:name]}(#{region[y_axis]["min"]}:#{region[y_axis]["max"]})"
|
|
448
|
+
end
|
|
449
|
+
if draw_method.ndims > 2
|
|
450
|
+
label += " vs #{region[z_axis][:name]}(#{region[z_axis]["min"]}:#{region[z_axis]["max"]})"
|
|
451
|
+
end
|
|
452
|
+
tmp = Array.new
|
|
453
|
+
dimensions.each{|dim|
|
|
454
|
+
name = dim[:name]
|
|
455
|
+
next if name==x_axis
|
|
456
|
+
next if draw_method.ndims>1 && name==y_axis
|
|
457
|
+
next if draw_method.ndims>2 && name==z_axis
|
|
458
|
+
tmp.push "#{name}=#{region[name]["min"]}" if region[name]
|
|
459
|
+
}
|
|
460
|
+
label += " @ "+tmp.join(",") unless tmp.length==0
|
|
461
|
+
return label
|
|
462
|
+
end
|
|
463
|
+
|
|
464
|
+
|
|
465
|
+
def self.from_vizshot(viz)
|
|
466
|
+
if viz && (par = parse_vizshot(viz))
|
|
467
|
+
vars, params = par
|
|
468
|
+
analysis = Analysis.new
|
|
469
|
+
vars.each{|var|
|
|
470
|
+
analysis.variables.push var
|
|
471
|
+
}
|
|
472
|
+
analysis.action_type = ACTION_TYPE.index("draw")
|
|
473
|
+
params.each{|name,val|
|
|
474
|
+
analysis.send(name+"=", val)
|
|
475
|
+
}
|
|
476
|
+
return analysis
|
|
477
|
+
else
|
|
478
|
+
return nil
|
|
479
|
+
end
|
|
480
|
+
end
|
|
481
|
+
|
|
482
|
+
|
|
483
|
+
def self.uri_params_from_vizshot(viz)
|
|
484
|
+
if viz && (par = parse_vizshot(viz))
|
|
485
|
+
vars, params = par
|
|
486
|
+
ary = Array.new
|
|
487
|
+
vars.each{|var|
|
|
488
|
+
ary.push "variables[#{var.path}]=1"
|
|
489
|
+
}
|
|
490
|
+
ary.push "action_type=draw"
|
|
491
|
+
params.each{|name,val|
|
|
492
|
+
ary += param_to_str("analysis[#{name}]",val)
|
|
493
|
+
}
|
|
494
|
+
# params.collect{|str| str.gsub(/[/,"%5B").gsub(/]/,"%5D")}.join("&")
|
|
495
|
+
URI.escape( ary.join("&") )
|
|
496
|
+
else
|
|
497
|
+
return nil
|
|
498
|
+
end
|
|
499
|
+
end
|
|
500
|
+
|
|
501
|
+
|
|
502
|
+
|
|
503
|
+
private
|
|
504
|
+
def self.parse_vizshot(viz)
|
|
505
|
+
if viz.get_variables.length == 0
|
|
506
|
+
return nil
|
|
507
|
+
end
|
|
508
|
+
|
|
509
|
+
plots = viz.get_plots
|
|
510
|
+
plots.each{|plot|
|
|
511
|
+
plot.each{|k,v|
|
|
512
|
+
plot[k.to_sym] = v if String === k
|
|
513
|
+
}
|
|
514
|
+
}
|
|
515
|
+
vars = Array.new
|
|
516
|
+
viz.get_variables.each{|var|
|
|
517
|
+
# return nil unless var.id # commented out by horinout on 2007-06-28
|
|
518
|
+
vars.push var
|
|
519
|
+
}
|
|
520
|
+
|
|
521
|
+
params = Array.new
|
|
522
|
+
|
|
523
|
+
cut = plots[0][:cut]
|
|
524
|
+
=begin
|
|
525
|
+
plots.each{|plot|
|
|
526
|
+
unless cut == plot[:cut]
|
|
527
|
+
raise "different cuts exist"
|
|
528
|
+
end
|
|
529
|
+
}
|
|
530
|
+
=end
|
|
531
|
+
if Array === cut
|
|
532
|
+
gphys = vars[0].gphys
|
|
533
|
+
cut_ary = Array.new
|
|
534
|
+
gphys.rank.times{|i|
|
|
535
|
+
name = gphys.coord(i).name
|
|
536
|
+
cut_ary.push [name, cut[i]]
|
|
537
|
+
}
|
|
538
|
+
else Hash === cut
|
|
539
|
+
gphys = vars[0].gphys
|
|
540
|
+
cut_ary = Array.new
|
|
541
|
+
gphys.rank.times{|i|
|
|
542
|
+
name = gphys.coord(i).name
|
|
543
|
+
cut_ary.push [name, cut[name]]
|
|
544
|
+
}
|
|
545
|
+
end
|
|
546
|
+
reg = Hash.new
|
|
547
|
+
axes = Array.new
|
|
548
|
+
|
|
549
|
+
cut_ary.each{|name,range|
|
|
550
|
+
case range
|
|
551
|
+
when Range
|
|
552
|
+
reg[name] = {"min"=>range.first,"max"=>range.last}
|
|
553
|
+
axes.push name
|
|
554
|
+
when Numeric
|
|
555
|
+
reg[name] = {"min"=>range}
|
|
556
|
+
else
|
|
557
|
+
raise "[BUG]"
|
|
558
|
+
end
|
|
559
|
+
}
|
|
560
|
+
|
|
561
|
+
params.push ["region", reg]
|
|
562
|
+
|
|
563
|
+
method = plots[0][:method].to_s
|
|
564
|
+
draw_method = Node.find_draw_methods(:first, :conditions => ["vizshot_method=?",method]).entity
|
|
565
|
+
plots.each{|plot|
|
|
566
|
+
=begin
|
|
567
|
+
unless method == plot[:method].to_s
|
|
568
|
+
raise "[BUG]"
|
|
569
|
+
end
|
|
570
|
+
=end
|
|
571
|
+
}
|
|
572
|
+
unless draw_method.ndims == axes.length
|
|
573
|
+
raise "[BUG]"
|
|
574
|
+
end
|
|
575
|
+
|
|
576
|
+
params.push ["draw_method", draw_method.name]
|
|
577
|
+
|
|
578
|
+
axes = [axes[1],axes[0]] if draw_method.ndims>1 && plots[0][:transpose]
|
|
579
|
+
params.push ["x_axis", axes[0]]
|
|
580
|
+
params.push ["y_axis", axes[1]] if draw_method.ndims > 1
|
|
581
|
+
params.push ["z_axis", axes[2]] if draw_method.ndims > 2
|
|
582
|
+
params.push ["draw_projection", viz.get_itr]
|
|
583
|
+
params.push ["viewport", viz.get_viewport]
|
|
584
|
+
|
|
585
|
+
isize = DRAW_SIZE.index(viz.get_size)
|
|
586
|
+
unless isize
|
|
587
|
+
raise "[BUG]"
|
|
588
|
+
end
|
|
589
|
+
params.push ["draw_size", isize]
|
|
590
|
+
|
|
591
|
+
params += get_params_from_vizshot_plot(draw_method,plots[0])
|
|
592
|
+
if draw_method.ndims == 2
|
|
593
|
+
params.push ["draw_variables_order", {0 => {0=>0,1=>1}}]
|
|
594
|
+
end
|
|
595
|
+
|
|
596
|
+
return [vars, params]
|
|
597
|
+
end
|
|
598
|
+
|
|
599
|
+
|
|
600
|
+
def self.param_to_str(name, val)
|
|
601
|
+
ary = Array.new
|
|
602
|
+
case val
|
|
603
|
+
when String
|
|
604
|
+
ary.push "#{name}=#{val}"
|
|
605
|
+
when Numeric
|
|
606
|
+
val = val.to_i if Float === val && val.to_i == val
|
|
607
|
+
ary.push "#{name}=#{val}"
|
|
608
|
+
when TrueClass
|
|
609
|
+
ary.push "#{name}=1"
|
|
610
|
+
when FalseClass
|
|
611
|
+
ary.push "#{name}=0"
|
|
612
|
+
when Array
|
|
613
|
+
ary.push "#{name}=#{val.join(',')}"
|
|
614
|
+
when Hash
|
|
615
|
+
val = val.sort{|a,b|
|
|
616
|
+
if String===a
|
|
617
|
+
if a=="min"
|
|
618
|
+
return -1
|
|
619
|
+
elsif a=="max"
|
|
620
|
+
return 1
|
|
621
|
+
end
|
|
622
|
+
end
|
|
623
|
+
a <=> b
|
|
624
|
+
}
|
|
625
|
+
val.each{|k,v|
|
|
626
|
+
ary += param_to_str("#{name}[#{k}]", v)
|
|
627
|
+
}
|
|
628
|
+
else
|
|
629
|
+
ary.push "#{name}=#{val.inspect}"
|
|
630
|
+
end
|
|
631
|
+
return ary
|
|
632
|
+
end
|
|
633
|
+
|
|
634
|
+
|
|
635
|
+
def self.get_params_from_vizshot_plot(draw_method,plot)
|
|
636
|
+
ary = Array.new
|
|
637
|
+
draw_method.draw_method_attributes.each{|attr|
|
|
638
|
+
case attr.parser
|
|
639
|
+
when :vizshot, "vizshot"
|
|
640
|
+
name = attr.name.to_sym
|
|
641
|
+
when :ggraph, "ggraph"
|
|
642
|
+
name = attr.name
|
|
643
|
+
else
|
|
644
|
+
next
|
|
645
|
+
end
|
|
646
|
+
val = plot[name]
|
|
647
|
+
ary.push(["#{draw_method.name}_#{attr.name}",val]) if val
|
|
648
|
+
}
|
|
649
|
+
return ary
|
|
650
|
+
end
|
|
651
|
+
|
|
652
|
+
|
|
653
|
+
|
|
654
|
+
def variables_order(val)
|
|
655
|
+
unless Hash === val
|
|
656
|
+
return nil
|
|
657
|
+
end
|
|
658
|
+
variables_order = Hash.new
|
|
659
|
+
val.each{|k,v|
|
|
660
|
+
if Hash === v
|
|
661
|
+
tmp = Array.new
|
|
662
|
+
v.each{|k1,v1|
|
|
663
|
+
tmp[k1.to_i] = v1.to_i
|
|
664
|
+
}
|
|
665
|
+
variables_order[k.to_i] = tmp
|
|
666
|
+
else
|
|
667
|
+
return nil
|
|
668
|
+
end
|
|
669
|
+
}
|
|
670
|
+
ary = variables_order.values.flatten
|
|
671
|
+
unless ary.max == ary.length-1
|
|
672
|
+
return nil
|
|
673
|
+
end
|
|
674
|
+
ary.length.times{|i|
|
|
675
|
+
unless ary.include?(i)
|
|
676
|
+
return nil
|
|
677
|
+
end
|
|
678
|
+
}
|
|
679
|
+
return variables_order
|
|
680
|
+
end
|
|
681
|
+
|
|
682
|
+
|
|
683
|
+
def get_vizshot_options
|
|
684
|
+
hash = Hash.new
|
|
685
|
+
draw_method.draw_method_attributes.each{|attr|
|
|
686
|
+
case attr.parser
|
|
687
|
+
when :vizshot, "vizshot"
|
|
688
|
+
name = attr.name.to_sym
|
|
689
|
+
when :ggraph, "ggraph"
|
|
690
|
+
name = attr.name
|
|
691
|
+
else
|
|
692
|
+
next
|
|
693
|
+
end
|
|
694
|
+
val = self.send("#{draw_method.name}_#{attr.name}")
|
|
695
|
+
if !val.nil? && val!=[] && val!=""
|
|
696
|
+
hash[name] = val
|
|
697
|
+
elsif !attr.optional
|
|
698
|
+
raise "#{attr.name} of #{draw_method.name} cannot not be omitted"
|
|
699
|
+
end
|
|
700
|
+
}
|
|
701
|
+
return hash
|
|
702
|
+
end
|
|
703
|
+
|
|
704
|
+
def get_index_from_name(name)
|
|
705
|
+
dimensions.each_with_index{|dim,i|
|
|
706
|
+
if dim[:name] == name
|
|
707
|
+
return i
|
|
708
|
+
end
|
|
709
|
+
}
|
|
710
|
+
return nil
|
|
711
|
+
end
|
|
712
|
+
|
|
713
|
+
|
|
714
|
+
|
|
715
|
+
end
|