gfdnavi 1.3.0.0

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Files changed (446) hide show
  1. data/ChangeLog +10949 -0
  2. data/LICENCE.txt +57 -0
  3. data/Makefile +18 -0
  4. data/TODO +132 -0
  5. data/app/controllers/analysis_controller.rb +700 -0
  6. data/app/controllers/application.rb +41 -0
  7. data/app/controllers/draw_method_controller.rb +172 -0
  8. data/app/controllers/explorer_controller.rb +197 -0
  9. data/app/controllers/finder_controller.rb +331 -0
  10. data/app/controllers/function_controller.rb +204 -0
  11. data/app/controllers/group_controller.rb +115 -0
  12. data/app/controllers/keyword_attributes_controller.rb +52 -0
  13. data/app/controllers/knowledge_controller.rb +928 -0
  14. data/app/controllers/nodes_controller.rb +515 -0
  15. data/app/controllers/search_controller.rb +341 -0
  16. data/app/controllers/user_controller.rb +337 -0
  17. data/app/helpers/analysis_helper.rb +2 -0
  18. data/app/helpers/application_helper.rb +105 -0
  19. data/app/helpers/description_helper.rb +2 -0
  20. data/app/helpers/function_helper.rb +2 -0
  21. data/app/helpers/group_helper.rb +2 -0
  22. data/app/helpers/search_helper.rb +3 -0
  23. data/app/helpers/user_helper.rb +2 -0
  24. data/app/helpers/work_flow_helper.rb +92 -0
  25. data/app/models/actual_file.rb +3 -0
  26. data/app/models/analysis.rb +715 -0
  27. data/app/models/analysis_history.rb +42 -0
  28. data/app/models/cross_array.rb +22 -0
  29. data/app/models/cross_result.rb +254 -0
  30. data/app/models/derived_spatial_attribute.rb +3 -0
  31. data/app/models/diagram_cache.rb +16 -0
  32. data/app/models/diagram_cache_datum.rb +4 -0
  33. data/app/models/diagram_cache_session.rb +8 -0
  34. data/app/models/directory.rb +21 -0
  35. data/app/models/draw_method.rb +48 -0
  36. data/app/models/draw_method_attribute.rb +8 -0
  37. data/app/models/draw_parameter.rb +12 -0
  38. data/app/models/explorer_query.rb +354 -0
  39. data/app/models/explorer_result.rb +312 -0
  40. data/app/models/function.rb +75 -0
  41. data/app/models/function_argument.rb +6 -0
  42. data/app/models/function_output.rb +4 -0
  43. data/app/models/group.rb +153 -0
  44. data/app/models/image.rb +20 -0
  45. data/app/models/keyword_attribute.rb +179 -0
  46. data/app/models/knowledge.rb +94 -0
  47. data/app/models/knowledge_backup.rb +32 -0
  48. data/app/models/knowledge_figure.rb +16 -0
  49. data/app/models/knowledge_figure_backup.rb +16 -0
  50. data/app/models/knowledge_parser.rb +392 -0
  51. data/app/models/node.rb +605 -0
  52. data/app/models/node_entity_abstract.rb +112 -0
  53. data/app/models/node_lineage.rb +6 -0
  54. data/app/models/node_relation.rb +4 -0
  55. data/app/models/path_node.rb +60 -0
  56. data/app/models/query.rb +193 -0
  57. data/app/models/query_history.rb +12 -0
  58. data/app/models/results.rb +48 -0
  59. data/app/models/sign_up_user.rb +25 -0
  60. data/app/models/spatial_and_time_attribute.rb +11 -0
  61. data/app/models/user.rb +115 -0
  62. data/app/models/user_mailer.rb +48 -0
  63. data/app/models/value_type.rb +3 -0
  64. data/app/models/variable.rb +70 -0
  65. data/app/models/virtual_node.rb +457 -0
  66. data/app/views/analysis/__help_analysis_tab.en.html +57 -0
  67. data/app/views/analysis/__help_draw_share.en.html +12 -0
  68. data/app/views/analysis/__help_draw_tab.en.html +6 -0
  69. data/app/views/analysis/_analysis_function_settings.rhtml +61 -0
  70. data/app/views/analysis/_analysis_settings.rhtml +28 -0
  71. data/app/views/analysis/_diagram.rhtml +70 -0
  72. data/app/views/analysis/_dimension_option.rhtml +59 -0
  73. data/app/views/analysis/_draw_general_settings.rhtml +217 -0
  74. data/app/views/analysis/_draw_settings.rhtml +73 -0
  75. data/app/views/analysis/_history.rhtml +19 -0
  76. data/app/views/analysis/_popular_diagrams.rhtml +42 -0
  77. data/app/views/analysis/_save_form.rhtml +44 -0
  78. data/app/views/analysis/_variables.rhtml +66 -0
  79. data/app/views/analysis/_variables_order.rhtml +56 -0
  80. data/app/views/analysis/index.rhtml +195 -0
  81. data/app/views/analysis/preview.rhtml +3 -0
  82. data/app/views/analysis/save.rhtml +73 -0
  83. data/app/views/analysis/show_diagram.rhtml +42 -0
  84. data/app/views/cross/_display_map.rhtml +201 -0
  85. data/app/views/cross/_result.rhtml +205 -0
  86. data/app/views/cross/_show_result_tree.rhtml +40 -0
  87. data/app/views/cross/_show_results.rhtml +80 -0
  88. data/app/views/cross/_style.rhtml +21 -0
  89. data/app/views/cross/index.rhtml +271 -0
  90. data/app/views/draw_method/_edit_form.rhtml +110 -0
  91. data/app/views/draw_method/create.rhtml +8 -0
  92. data/app/views/draw_method/details.rhtml +113 -0
  93. data/app/views/draw_method/edit.rhtml +8 -0
  94. data/app/views/draw_method/list.rhtml +80 -0
  95. data/app/views/explorer/_display_map.rhtml +199 -0
  96. data/app/views/explorer/_show_result_tree.rhtml +40 -0
  97. data/app/views/explorer/_show_results.rhtml +101 -0
  98. data/app/views/explorer/_style.rhtml +21 -0
  99. data/app/views/explorer/index.rhtml +214 -0
  100. data/app/views/finder/_children.html.erb +84 -0
  101. data/app/views/finder/_children_details.html.erb +74 -0
  102. data/app/views/finder/_children_details_tr.html.erb +196 -0
  103. data/app/views/finder/create_tree.html.erb +15 -0
  104. data/app/views/finder/flex.html.erb +52 -0
  105. data/app/views/finder/index.html.erb +47 -0
  106. data/app/views/finder/show_details.html.erb +3 -0
  107. data/app/views/finder/show_images.html.erb +3 -0
  108. data/app/views/function/_edit_form.rhtml +106 -0
  109. data/app/views/function/create.rhtml +8 -0
  110. data/app/views/function/details.rhtml +96 -0
  111. data/app/views/function/edit.rhtml +8 -0
  112. data/app/views/function/list.rhtml +80 -0
  113. data/app/views/group/add_member.rhtml +13 -0
  114. data/app/views/group/change_owner.rhtml +15 -0
  115. data/app/views/group/create.rhtml +11 -0
  116. data/app/views/group/delete_member.rhtml +14 -0
  117. data/app/views/group/list.rhtml +63 -0
  118. data/app/views/knowledge/_backup.rhtml +135 -0
  119. data/app/views/knowledge/_category.rhtml +58 -0
  120. data/app/views/knowledge/_category_list.rhtml +34 -0
  121. data/app/views/knowledge/_category_table.rhtml +23 -0
  122. data/app/views/knowledge/_comment.rhtml +64 -0
  123. data/app/views/knowledge/_comment_input_form.rhtml +19 -0
  124. data/app/views/knowledge/_comments.rhtml +84 -0
  125. data/app/views/knowledge/_form.rhtml +139 -0
  126. data/app/views/knowledge/_group_figure_form.rhtml +187 -0
  127. data/app/views/knowledge/_layout_figure.rhtml +61 -0
  128. data/app/views/knowledge/_layout_figures_in_a_row_above_text.rhtml +42 -0
  129. data/app/views/knowledge/_layout_figures_under_text.rhtml +45 -0
  130. data/app/views/knowledge/_layout_one_figure_above_text.rhtml +28 -0
  131. data/app/views/knowledge/_summary.rhtml +21 -0
  132. data/app/views/knowledge/edit.rhtml +37 -0
  133. data/app/views/knowledge/list.rhtml +287 -0
  134. data/app/views/knowledge/new.rhtml +23 -0
  135. data/app/views/knowledge/new_from_analysis.rhtml +21 -0
  136. data/app/views/knowledge/show.rhtml +196 -0
  137. data/app/views/layouts/gfdnavi.rhtml +105 -0
  138. data/app/views/nodes/_ancestors.html.erb +89 -0
  139. data/app/views/nodes/_description_methods_table.html.erb +75 -0
  140. data/app/views/nodes/_mode.html.erb +16 -0
  141. data/app/views/nodes/description.html.erb +181 -0
  142. data/app/views/nodes/description_methods.html.erb +1 -0
  143. data/app/views/nodes/edit.html.erb +73 -0
  144. data/app/views/nodes/index.html.erb +25 -0
  145. data/app/views/nodes/show.html.erb +20 -0
  146. data/app/views/search/_children_details_mapsearch.rhtml +68 -0
  147. data/app/views/search/_children_details_tr.rhtml +205 -0
  148. data/app/views/search/_show_grouplist.rhtml +74 -0
  149. data/app/views/search/_show_results.rhtml +43 -0
  150. data/app/views/search/_show_results_global.rhtml +36 -0
  151. data/app/views/search/_show_results_partial.rhtml +39 -0
  152. data/app/views/search/_show_results_partial_groupbyfile.rhtml +50 -0
  153. data/app/views/search/_show_variablelist.rhtml +28 -0
  154. data/app/views/search/mapsearch.rhtml +176 -0
  155. data/app/views/search/remapsearch.rjs +18 -0
  156. data/app/views/search/show_details.rhtml +3 -0
  157. data/app/views/user/add_user.rhtml +30 -0
  158. data/app/views/user/change_password.rhtml +25 -0
  159. data/app/views/user/edit.html.erb +50 -0
  160. data/app/views/user/index.rhtml +162 -0
  161. data/app/views/user/login.rhtml +41 -0
  162. data/app/views/user/logout.rhtml +4 -0
  163. data/app/views/user/signup.rhtml +36 -0
  164. data/app/views/user/signup_succeeded.rhtml +36 -0
  165. data/app/views/user_mailer/authorization_inform.rhtml +15 -0
  166. data/app/views/user_mailer/signup_accepted.rhtml +12 -0
  167. data/app/views/user_mailer/signup_confirm.rhtml +14 -0
  168. data/app/views/user_mailer/signup_inform.rhtml +13 -0
  169. data/app/views/user_mailer/signup_rejected.rhtml +11 -0
  170. data/app/views/work_flow/_push_wsdls.rhtml +55 -0
  171. data/app/views/work_flow/index.rhtml +46 -0
  172. data/config/database.yml.example +35 -0
  173. data/config/environment.rb +68 -0
  174. data/config/gfdnavi.yml.example +95 -0
  175. data/config/load_config.rb +151 -0
  176. data/config/routes.rb +35 -0
  177. data/consistency_checker.rb +129 -0
  178. data/data/gfdnavi_docs/how_to_draw_multiple_images.knlge +68 -0
  179. data/data/gfdnavi_docs/how_to_knowledge.knlge +138 -0
  180. data/data/gfdnavi_docs/how_to_write_document_about_Gfdnavi.knlge +30 -0
  181. data/data/samples/jmadata.SIGEN +8 -0
  182. data/data/samples/jmadata.yml +6 -0
  183. data/data/samples/jmadata/MSM-P/2006.nc.yml +2 -0
  184. data/data/samples/jmadata/MSM-P/2006.yml +17 -0
  185. data/data/samples/jmadata/MSM-P/2006/0101.nc +0 -0
  186. data/data/samples/jmadata/MSM-P/2006/0101.nc.yml +13 -0
  187. data/data/samples/jmadata/MSM-P/2006/0102.nc +0 -0
  188. data/data/samples/jmadata/MSM-P/2006/0103.nc +0 -0
  189. data/data/samples/jmadata/MSM-P/2006/0104.nc +0 -0
  190. data/data/samples/jmadata/MSM-P/2006/0105.nc +0 -0
  191. data/data/samples/jmadata/MSM-P/2006/010[1-3].nc.yml +2 -0
  192. data/data/samples/jmadata/MSM-P/2006/skip_data.rb +96 -0
  193. data/data/samples/jmadata/MSM-P/2006/skip_data.sh +6 -0
  194. data/data/samples/reanalysis.SIGEN +8 -0
  195. data/data/samples/reanalysis/era40.SIGEN +8 -0
  196. data/data/samples/reanalysis/era40.yml +2 -0
  197. data/data/samples/reanalysis/era40/t.jan.nc +0 -0
  198. data/data/samples/reanalysis/era40/t.jan.nc.yml +1 -0
  199. data/data/samples/reanalysis/ncep.SIGEN +9 -0
  200. data/data/samples/reanalysis/ncep/T.jan.100hPa.png +0 -0
  201. data/data/samples/reanalysis/ncep/T.jan.100hPa.png.yml +43 -0
  202. data/data/samples/reanalysis/ncep/T.jan.nc +0 -0
  203. data/data/samples/reanalysis/ncep/T.jan.zonal_mean.nc +0 -0
  204. data/data/samples/reanalysis/ncep/T.jan.zonal_mean.nc.yml +8 -0
  205. data/data/samples/reanalysis/ncep/T.jan_only_root.nc +0 -0
  206. data/data/samples/reanalysis/ncep/T.jan_only_root.nc.yml +4 -0
  207. data/data/samples/reanalysis/ncep/UV.jan.nc +0 -0
  208. data/data/samples/reanalysis/ncep/UV.jan.nc.yml +10 -0
  209. data/data/samples/reanalysis/ncep/UV.jan.nc.yml.ja +11 -0
  210. data/data/samples/sonde_operational.yml +5 -0
  211. data/data/samples/sonde_operational/std_plev.yml +12 -0
  212. data/data/samples/sonde_operational/std_plev/41256.spl.nc +0 -0
  213. data/data/samples/sonde_operational/std_plev/42410.spl.nc +0 -0
  214. data/data/samples/sonde_operational/std_plev/43333.spl.nc +0 -0
  215. data/data/samples/sonde_operational/std_plev/43346.spl.nc +0 -0
  216. data/data/samples/sonde_operational/std_plev/48698.spl.nc +0 -0
  217. data/data/samples/sonde_operational/std_plev/61641.spl.nc +0 -0
  218. data/data/samples/sonde_operational/std_plev/63741.spl.nc +0 -0
  219. data/data/samples/sonde_operational/std_plev/67083.spl.nc +0 -0
  220. data/data/samples/sonde_operational/std_plev/72261.spl.nc +0 -0
  221. data/data/samples/sonde_operational/std_plev/76805.spl.nc +0 -0
  222. data/data/samples/sonde_operational/std_plev/82193.spl.nc +0 -0
  223. data/data/samples/sonde_operational/std_plev/91165.spl.nc +0 -0
  224. data/data/samples/sonde_operational/std_plev/91610.spl.nc +0 -0
  225. data/data/samples/sonde_operational/std_plev/91948.spl.nc +0 -0
  226. data/data/samples/sonde_operational/std_plev/94294.spl.nc +0 -0
  227. data/db/NetCDFparser.rb +406 -0
  228. data/db/create_derived_spatial_attributes.sql +12 -0
  229. data/db/draw_methods/line.yml +6 -0
  230. data/db/draw_methods/scatter.yml +38 -0
  231. data/db/draw_methods/tone.yml +64 -0
  232. data/db/draw_methods/vector.yml +19 -0
  233. data/db/dump_db.rb +43 -0
  234. data/db/functions/additions.yml +10 -0
  235. data/db/functions/cut.yml +10 -0
  236. data/db/functions/division.yml +10 -0
  237. data/db/functions/mean.yml +28 -0
  238. data/db/functions/multiplication.yml +10 -0
  239. data/db/functions/stddev.yml +28 -0
  240. data/db/functions/subtraction.yml +10 -0
  241. data/db/migrate/001_initial_scheme.rb +289 -0
  242. data/db/migrate/002_add_open_id_authentication_tables.rb +20 -0
  243. data/db/register_directory_tree.rb +760 -0
  244. data/db/restore_db.rb +60 -0
  245. data/gfdnavi-install +828 -0
  246. data/install.rb +828 -0
  247. data/lib/activerecord_gfdnavi.rb +31 -0
  248. data/lib/basic_authorization.rb +50 -0
  249. data/lib/create_activeresources.rb +108 -0
  250. data/lib/execute_analysis.rb +472 -0
  251. data/lib/file_gfdnavi.rb +38 -0
  252. data/lib/gphys_gfdnavi.rb +81 -0
  253. data/lib/localdir.rb +110 -0
  254. data/lib/login_system.rb +110 -0
  255. data/lib/multibytes.rb +20 -0
  256. data/lib/narray_yaml.rb +58 -0
  257. data/lib/no_rdb_base.rb +40 -0
  258. data/lib/opendapdir.rb +171 -0
  259. data/lib/tar.rb +127 -0
  260. data/lib/tasks/clean.rake +65 -0
  261. data/lib/tasks/setup.rake +316 -0
  262. data/lib/tasks/update.rake +62 -0
  263. data/lib/vizshot_gfdnavi.rb +224 -0
  264. data/public/crossdomain.xml +4 -0
  265. data/public/flex/NodeTreeDescriptor.as +55 -0
  266. data/public/flex/TreeNode.as +253 -0
  267. data/public/flex/finder.mxml +304 -0
  268. data/public/flex/finder.swf +0 -0
  269. data/public/flex/gfdnavi.mxml +52 -0
  270. data/public/flex/gfdnavi.swf +0 -0
  271. data/public/images/Help_S-shots/dir_tree_with_add.jpg +0 -0
  272. data/public/images/analyze.gif +0 -0
  273. data/public/images/circle.gif +0 -0
  274. data/public/images/create_from_analysis_button.png +0 -0
  275. data/public/images/delete.png +0 -0
  276. data/public/images/down.png +0 -0
  277. data/public/images/drawbutton.gif +0 -0
  278. data/public/images/gfdnavi_home_logo.png +0 -0
  279. data/public/images/gfdnavi_logo_big.png +0 -0
  280. data/public/images/gfdnavi_logo_med.png +0 -0
  281. data/public/images/gfdnavi_logo_mini.png +0 -0
  282. data/public/images/gfdnavi_logo_nobg_big.png +0 -0
  283. data/public/images/gfdnavi_logo_nobg_med.png +0 -0
  284. data/public/images/gfdnavi_logo_nobg_small.png +0 -0
  285. data/public/images/gfdnavi_logo_small.png +0 -0
  286. data/public/images/gfdnavi_logo_xsmall.png +0 -0
  287. data/public/images/hbar.png +0 -0
  288. data/public/images/helpmark16.png +0 -0
  289. data/public/images/helpmark18.png +0 -0
  290. data/public/images/kikyu_g.gif +0 -0
  291. data/public/images/kikyu_r.gif +0 -0
  292. data/public/images/map_icon_g.gif +0 -0
  293. data/public/images/map_icon_r.gif +0 -0
  294. data/public/images/new_knowledge.png +0 -0
  295. data/public/images/openid.png +0 -0
  296. data/public/images/read_in_the_form.png +0 -0
  297. data/public/images/slider_f.gif +0 -0
  298. data/public/images/slider_f_red.gif +0 -0
  299. data/public/images/star1.gif +0 -0
  300. data/public/images/star2.gif +0 -0
  301. data/public/images/startanim.gif +0 -0
  302. data/public/images/stopanim.gif +0 -0
  303. data/public/images/tree/DL.png +0 -0
  304. data/public/images/tree/anal_viz.png +0 -0
  305. data/public/images/tree/analyze_visualize_checked_items.png +0 -0
  306. data/public/images/tree/binary.png +0 -0
  307. data/public/images/tree/details.png +0 -0
  308. data/public/images/tree/download_checked_items.png +0 -0
  309. data/public/images/tree/folder.png +0 -0
  310. data/public/images/tree/folder_close.gif +0 -0
  311. data/public/images/tree/image2.png +0 -0
  312. data/public/images/tree/knowledge.png +0 -0
  313. data/public/images/tree/knowledges.png +0 -0
  314. data/public/images/tree/last.gif +0 -0
  315. data/public/images/tree/last.png +0 -0
  316. data/public/images/tree/minus.gif +0 -0
  317. data/public/images/tree/minus_simple.gif +0 -0
  318. data/public/images/tree/none.gif +0 -0
  319. data/public/images/tree/none.png +0 -0
  320. data/public/images/tree/plus.gif +0 -0
  321. data/public/images/tree/plus_simple.gif +0 -0
  322. data/public/images/tree/show.png +0 -0
  323. data/public/images/tree/show_checked_items.png +0 -0
  324. data/public/images/tree/t.gif +0 -0
  325. data/public/images/tree/t.png +0 -0
  326. data/public/images/tree/tate.gif +0 -0
  327. data/public/images/tree/tate.png +0 -0
  328. data/public/images/up.png +0 -0
  329. data/public/images/vbar.png +0 -0
  330. data/public/images/white.bmp +0 -0
  331. data/public/images/x.gif +0 -0
  332. data/public/index.html +100 -0
  333. data/public/javascripts/AC_OETags.js +269 -0
  334. data/public/javascripts/analysis.js +751 -0
  335. data/public/javascripts/application.js +29 -0
  336. data/public/javascripts/directory_tree.js +102 -0
  337. data/public/javascripts/draw_method.js +83 -0
  338. data/public/javascripts/excanvas.js +704 -0
  339. data/public/javascripts/function.js +107 -0
  340. data/public/javascripts/gfdnavi.js +175 -0
  341. data/public/javascripts/knowledge.js +384 -0
  342. data/public/javascripts/mapsearch.js +313 -0
  343. data/public/javascripts/progress.js +42 -0
  344. data/public/javascripts/resizable_box.js +164 -0
  345. data/public/javascripts/slider.js +260 -0
  346. data/public/javascripts/tab.js +17 -0
  347. data/public/javascripts/work_flow.js +452 -0
  348. data/public/stylesheets/analysis.css +111 -0
  349. data/public/stylesheets/description.css +71 -0
  350. data/public/stylesheets/gfdnavi.css +141 -0
  351. data/public/stylesheets/knowledge.css +218 -0
  352. data/public/stylesheets/search.css +184 -0
  353. data/public/stylesheets/tree.css +45 -0
  354. data/public/stylesheets/tree_for_ie.css +3 -0
  355. data/public/stylesheets/work_flow.css +78 -0
  356. data/script/cleaner +11 -0
  357. data/script/server_ssl +131 -0
  358. data/test/fixtures/diagram_cache_data.yml +5 -0
  359. data/test/fixtures/diagram_cache_sessions.yml +6 -0
  360. data/test/fixtures/diagram_caches.yml +6 -0
  361. data/test/fixtures/directories.yml +57 -0
  362. data/test/fixtures/draw_parameters.yml +6 -0
  363. data/test/fixtures/function_arguments.yml +15 -0
  364. data/test/fixtures/function_outputs.yml +15 -0
  365. data/test/fixtures/functions.yml +29 -0
  366. data/test/fixtures/group_members.yml +33 -0
  367. data/test/fixtures/groups.yml +25 -0
  368. data/test/fixtures/images.yml +12 -0
  369. data/test/fixtures/keyword_attributes.yml +73 -0
  370. data/test/fixtures/knowledges.yml +10 -0
  371. data/test/fixtures/node_relations.yml +11 -0
  372. data/test/fixtures/nodes.yml +298 -0
  373. data/test/fixtures/sign_up_users.yml +8 -0
  374. data/test/fixtures/spatial_and_time_attributes.yml +29 -0
  375. data/test/fixtures/user_mailer/authorization_inform +11 -0
  376. data/test/fixtures/user_mailer/signup_accepted +10 -0
  377. data/test/fixtures/user_mailer/signup_confirm +17 -0
  378. data/test/fixtures/user_mailer/signup_inform +10 -0
  379. data/test/fixtures/user_mailer/signup_rejected +9 -0
  380. data/test/fixtures/users.yml +31 -0
  381. data/test/fixtures/value_types.yml +10 -0
  382. data/test/fixtures/variables.yml +17 -0
  383. data/test/functional/analysis_controller_test.rb +169 -0
  384. data/test/functional/description_controller_test.rb +18 -0
  385. data/test/functional/function_controller_test.rb +18 -0
  386. data/test/functional/group_controller_test.rb +18 -0
  387. data/test/functional/search_controller_test.rb +83 -0
  388. data/test/functional/user_controller_test.rb +77 -0
  389. data/test/functional/webservice_analysis_api_test.rb +12 -0
  390. data/test/functional/work_flow_controller_test.rb +18 -0
  391. data/test/test_helper.rb +28 -0
  392. data/test/unit/diagram_cache_datum_test.rb +10 -0
  393. data/test/unit/diagram_cache_session_test.rb +10 -0
  394. data/test/unit/diagram_cache_test.rb +10 -0
  395. data/test/unit/directory_test.rb +49 -0
  396. data/test/unit/draw_parameter_test.rb +10 -0
  397. data/test/unit/function_argument_test.rb +10 -0
  398. data/test/unit/function_output_test.rb +10 -0
  399. data/test/unit/function_test.rb +10 -0
  400. data/test/unit/group_test.rb +48 -0
  401. data/test/unit/image_test.rb +13 -0
  402. data/test/unit/keyword_attribute_test.rb +33 -0
  403. data/test/unit/knowledge_test.rb +13 -0
  404. data/test/unit/node_relation_test.rb +20 -0
  405. data/test/unit/node_test.rb +85 -0
  406. data/test/unit/sign_up_user_test.rb +20 -0
  407. data/test/unit/spatial_and_time_attribute_test.rb +29 -0
  408. data/test/unit/user_mailer_test.rb +101 -0
  409. data/test/unit/user_test.rb +134 -0
  410. data/test/unit/value_type_test.rb +10 -0
  411. data/test/unit/variable_test.rb +35 -0
  412. data/vendor/plugins/acts_as_list/README +23 -0
  413. data/vendor/plugins/acts_as_list/init.rb +3 -0
  414. data/vendor/plugins/acts_as_list/lib/active_record/acts/list.rb +256 -0
  415. data/vendor/plugins/acts_as_list/test/list_test.rb +332 -0
  416. data/vendor/plugins/acts_as_tree/README +26 -0
  417. data/vendor/plugins/acts_as_tree/Rakefile +22 -0
  418. data/vendor/plugins/acts_as_tree/init.rb +1 -0
  419. data/vendor/plugins/acts_as_tree/lib/active_record/acts/tree.rb +96 -0
  420. data/vendor/plugins/acts_as_tree/test/abstract_unit.rb +0 -0
  421. data/vendor/plugins/acts_as_tree/test/acts_as_tree_test.rb +219 -0
  422. data/vendor/plugins/acts_as_tree/test/database.yml +0 -0
  423. data/vendor/plugins/acts_as_tree/test/fixtures/mixin.rb +0 -0
  424. data/vendor/plugins/acts_as_tree/test/fixtures/mixins.yml +0 -0
  425. data/vendor/plugins/acts_as_tree/test/schema.rb +0 -0
  426. data/vendor/plugins/will_paginate/CHANGELOG +92 -0
  427. data/vendor/plugins/will_paginate/LICENSE +18 -0
  428. data/vendor/plugins/will_paginate/README.rdoc +131 -0
  429. data/vendor/plugins/will_paginate/Rakefile +62 -0
  430. data/vendor/plugins/will_paginate/examples/apple-circle.gif +0 -0
  431. data/vendor/plugins/will_paginate/examples/index.haml +69 -0
  432. data/vendor/plugins/will_paginate/examples/index.html +92 -0
  433. data/vendor/plugins/will_paginate/examples/pagination.css +90 -0
  434. data/vendor/plugins/will_paginate/examples/pagination.sass +91 -0
  435. data/vendor/plugins/will_paginate/init.rb +1 -0
  436. data/vendor/plugins/will_paginate/lib/will_paginate.rb +86 -0
  437. data/vendor/plugins/will_paginate/lib/will_paginate/array.rb +16 -0
  438. data/vendor/plugins/will_paginate/lib/will_paginate/collection.rb +145 -0
  439. data/vendor/plugins/will_paginate/lib/will_paginate/core_ext.rb +32 -0
  440. data/vendor/plugins/will_paginate/lib/will_paginate/finder.rb +247 -0
  441. data/vendor/plugins/will_paginate/lib/will_paginate/named_scope.rb +132 -0
  442. data/vendor/plugins/will_paginate/lib/will_paginate/named_scope_patch.rb +39 -0
  443. data/vendor/plugins/will_paginate/lib/will_paginate/version.rb +9 -0
  444. data/vendor/plugins/will_paginate/lib/will_paginate/view_helpers.rb +373 -0
  445. data/vendor/plugins/will_paginate/will_paginate.gemspec +21 -0
  446. metadata +586 -0
@@ -0,0 +1,8 @@
1
+ <h2>Create Draw Method</h2>
2
+ <% form_tag do %>
3
+
4
+ <%= render :partial=>"edit_form" %>
5
+
6
+ <%= submit_tag("create") %>
7
+
8
+ <% end %>
@@ -0,0 +1,113 @@
1
+ <%
2
+ ary=Array.new
3
+ @draw_method.nvars.times{|i|
4
+ ary[i]= i==0 ? "gphys" : "gphys#{i}"
5
+ }
6
+ arg_str = ary.join(", ")
7
+ %>
8
+ <h2>Draw Method: <%= h(@draw_method.name) %></h2>
9
+
10
+ <table border=2>
11
+ <tr>
12
+ <th colspan=2>name</th>
13
+ <td><%= h(@draw_method.name) %></td>
14
+ </tr>
15
+ <tr>
16
+ <th colspan=2>description</th>
17
+ <td><%= h(@draw_method.description) %></td>
18
+ </tr>
19
+ <% if @draw_method.owner == @user %>
20
+ <tr>
21
+ <th colspan=2>usable to</th>
22
+ <td><%= if @draw_method.other_readable
23
+ rgs = Group.find_by_bit_flag(@draw_method.rgroups)
24
+ srgs = rgs.length>0 ? ' ('+rgs.collect{|g| g.name}.join(' ')+')' : ''
25
+ "everyone"+srgs
26
+ else
27
+ ags = Group.find_by_bit_flag(@draw_method.groups_readable)
28
+ ags.length>0 ? ags.collect{|g| g.name}.join(' ') : 'nobody'
29
+ end
30
+ %></td>
31
+ </tr>
32
+ <% end %>
33
+ <tr>
34
+ <th colspan=2>number of variables</label></th>
35
+ <td><%= @draw_method.nvars %></td>
36
+ </tr>
37
+ <tr>
38
+ <th colspan=2>number of dimensions</label></th>
39
+ <td><%= @draw_method.ndims %></td>
40
+ </tr>
41
+ <tr>
42
+ <th colspan=2>vizshot method</label></th>
43
+ <td><%= @draw_method.vizshot_method %></td>
44
+ </tr>
45
+ <tr>
46
+ <th colspan=2>script for vizshot</th>
47
+ <td>
48
+ <% if @draw_method.script %>
49
+ {|<%= arg_str %>|
50
+ <br/>
51
+ <div style="padding-left:1em">
52
+ <pre><%= h(@draw_method.script) %></pre>
53
+ </div>
54
+ }
55
+ <% end %>
56
+ </td>
57
+ </tr>
58
+ <tr>
59
+ <th colspan=2>script for ggraph</th>
60
+ <td>
61
+ <% if @draw_method.ggraph %>
62
+ {|<%= arg_str %>|
63
+ <br/>
64
+ <div style="padding-left:1em">
65
+ <pre><%= h(@draw_method.ggraph) %></pre>
66
+ </div>
67
+ }
68
+ <% end %>
69
+ </td>
70
+ </tr>
71
+
72
+
73
+ <%
74
+ attrs = @draw_method.draw_method_attributes
75
+ nattr = attrs.length
76
+ nattr.times do |j|
77
+ attr = attrs[j]
78
+ %>
79
+ <tr>
80
+ <th rowspan=5>attribute<%= j %></th>
81
+ <th>name</th>
82
+ <td><%= h(attr.name) %></td>
83
+ </tr>
84
+ <tr>
85
+ <th>value type</th>
86
+ <td><%= h(attr.value_type.name) %></td>
87
+ </tr>
88
+ <tr>
89
+ <th>default</th>
90
+ <td><%= h(attr.default) %></td>
91
+ </tr>
92
+ <tr>
93
+ <th>optional</th>
94
+ <td><%= attr.optional ? "true" : "false" %></td>
95
+ </tr>
96
+ <tr>
97
+ <th>parser</th>
98
+ <td><%= h(attr.parser) %></td>
99
+ </tr>
100
+ <% end %>
101
+
102
+
103
+
104
+ </table>
105
+
106
+ <br/>
107
+ <br/>
108
+
109
+ <% if (@user.super_user || @draw_method.owner==@user) && !@draw_method.default %>
110
+ <%= link_to("edit draw_methodtion", :action => "edit", :id => h(@draw_method.name)) %>
111
+ <br/>
112
+ <% end %>
113
+ <%= link_to("back to list", :action => "list") %>
@@ -0,0 +1,8 @@
1
+ <h2>Edit Draw Method: <%=h(@draw_method.name)%></h2>
2
+ <% form_tag do %>
3
+
4
+ <%= render :partial=>"edit_form" %>
5
+
6
+ <%= submit_tag("edit") %>
7
+
8
+ <% end %>
@@ -0,0 +1,80 @@
1
+ <h2>Own Draw Methods</h2>
2
+ <%
3
+ ndm = @own_dms.length
4
+ if ndm == 0
5
+ %>
6
+ None
7
+ <% else %>
8
+ <table border=1>
9
+ <tr>
10
+ <th>name</th>
11
+ <th>description</th>
12
+ <th></th>
13
+ <th></th>
14
+ </tr>
15
+ <%
16
+ ndm.times{|n|
17
+ dm = @own_dms[n]
18
+ name = h(dm.name)
19
+ %>
20
+ <tr>
21
+ <td><%= name %></td>
22
+ <td><%= h(dm.description) %></td>
23
+ <td><%= link_to("details", :action=>"details", :id=>name) %></td>
24
+ <% unless dm.default %>
25
+ <td><%= link_to("edit", :action=>"edit", :id=>name) %></td>
26
+ <% else %>
27
+ <td></td>
28
+ <% end %>
29
+ </tr>
30
+ <% } %>
31
+ </table>
32
+ <% end %>
33
+
34
+ <br/>
35
+ <br/>
36
+
37
+ <h2>Othere Draw Methods</h2>
38
+ <%
39
+ ndm = @other_dms.length
40
+ if ndm == 0
41
+ %>
42
+ None
43
+ <% else %>
44
+ <table border=1>
45
+ <tr>
46
+ <th>name</th>
47
+ <th>description</th>
48
+ <th></th>
49
+ <% if @super_user %>
50
+ <th></th>
51
+ <th></th>
52
+ <% end %>
53
+ </tr>
54
+ <%
55
+ ndm.times{|n|
56
+ dm = @other_dms[n]
57
+ name = h(dm.name)
58
+ %>
59
+ <tr>
60
+ <td><%= name %></td>
61
+ <td><%= h(dm.description) %></td>
62
+ <td><%= link_to("details", :action=>"details", :id=>name) %></td>
63
+ <% if @super_user %>
64
+ <td><%= h(dm.owner.login) %>
65
+ <% unless dm.default %>
66
+ <td><%= link_to("edit", :action=>"edit", :id=>name) %></td>
67
+ <% else %>
68
+ <td></td>
69
+ <% end %>
70
+ <% end %>
71
+ </tr>
72
+ <% } %>
73
+ </table>
74
+ <% end %>
75
+
76
+ <br/>
77
+ <br/>
78
+
79
+
80
+ <%= link_to("create draw method", :action => "create") %>
@@ -0,0 +1,199 @@
1
+ <script type="text/javascript">
2
+
3
+ var select_region;
4
+ var partial_covered=[];
5
+ var points=[];
6
+ var marker;
7
+
8
+ window.onload = function() {
9
+ map = new GMap2($("map"));
10
+ map.addControl(new GLargeMapControl());
11
+ map.addControl(new GScaleControl());
12
+ map.addControl(new GMapTypeControl());
13
+ startflg=false;
14
+ dDrag();
15
+ <% if @start_lon==nil && @previd!=nil then
16
+ # qh=QueryHistory.find(:first,:conditions=>["querypath like concat('%',?)",@previd])
17
+ qh=QueryHistory.find(:first,:conditions=>["queryset_id=? and querytype='space'",@results.qsetid])
18
+ if qh!=nil then
19
+ /\[S\]\((.*),(.*)\)-\((.*),(.*)\)/=~qh.description
20
+ @start_lon=$1.to_f
21
+ @start_lat=$2.to_f
22
+ @end_lon=$3.to_f
23
+ @end_lat=$4.to_f
24
+ end
25
+ end %>
26
+
27
+ <% if @start_lon!=nil then %>
28
+ <% if @start_lon.to_f > 180 then
29
+ slon=180-@start_lon.to_f
30
+ else
31
+ slon=@start_lon.to_f
32
+ end
33
+ if @end_lon.to_f > 180 then
34
+ elon=180-@end_lon.to_f
35
+ else
36
+ elon=@end_lon.to_f
37
+ end
38
+ %>
39
+
40
+ $("start_lon").value=<%= slon %>
41
+ $("end_lon").value=<%= elon %>
42
+ $("start_lat").value=<%= @start_lat %>
43
+ $("end_lat").value=<%= @end_lat %>
44
+
45
+ var rectObj;
46
+ <% if @dateline==1 then %>
47
+ rectObj = new GLatLngBounds(new GLatLng(<%=@start_lat.to_f%>,<%=elon%>), new GLatLng(<%=@end_lat.to_f%>,<%=slon%>));
48
+ <% else %>
49
+ rectObj = new GLatLngBounds(new GLatLng(<%=@start_lat.to_f%>,<%=slon%>), new GLatLng(<%=@end_lat.to_f%>,<%=elon%>));
50
+ <% end %>
51
+ var zm = map.getBoundsZoomLevel(rectObj);
52
+ <% if @dateline==1 then
53
+ cntr=((slon+elon)/2)+180;
54
+ if cntr>180 then
55
+ cntr = 180-cntr
56
+ end
57
+ %>
58
+ map.setCenter(new GLatLng(<%=(@end_lat.to_f+@start_lat.to_f)/2 %>,<%= cntr %>), zm, G_NORMAL_MAP);
59
+ <% else %>
60
+ map.setCenter(new GLatLng(<%= (@end_lat.to_f+@start_lat.to_f)/2 %>,<%= (slon+elon)/2 %>), zm, G_NORMAL_MAP);
61
+ <% end %>
62
+ var rectBounds = new GLatLngBounds(new GLatLng(<%=@start_lat%>,<%=slon%>),new GLatLng(<%=@end_lat%>,<%=elon%>));
63
+ select_region = new Rectangle(rectBounds);
64
+ map.addOverlay(select_region);
65
+ <% else %>
66
+ map.setCenter(new GLatLng(35.39,139.44),1, G_NORMAL_MAP);
67
+ <% end %>
68
+ showpoints();
69
+ showregions();
70
+
71
+ }
72
+
73
+ function modulo(x,y){
74
+ mod = x % y;
75
+ if (mod<0){ mod += y}
76
+ return mod;
77
+ }
78
+
79
+ function dDrag() {
80
+ GEvent.clearListeners(map,"mousemove");
81
+ map.disableDragging();
82
+
83
+ GEvent.addListener(map, "click", function(overlay, point){
84
+
85
+ current_point=new GLatLng(point.x,point.y);
86
+
87
+ if(point.x<0){ point.x=360+point.x; }
88
+ if(!startflg){
89
+ if(select_region){
90
+ map.removeOverlay(select_region);
91
+ }
92
+ start_point=point;
93
+ $("start_lon").value=point.x;
94
+ $("start_lat").value=point.y;
95
+ startflg=true;
96
+ var rectBounds = new GLatLngBounds(start_point,start_point);
97
+ select_region = new Rectangle(rectBounds);
98
+ map.addOverlay(select_region);
99
+ }else{
100
+ end_point=point;
101
+ startflg=false;
102
+ map.removeOverlay(select_region);
103
+ mwblon = map.getBounds().getSouthWest().lng();
104
+ // mwblon = west boundary lon of the map
105
+ if( modulo(end_point.x-mwblon,360) > modulo(start_point.x-mwblon,360)){
106
+ sw_point = start_point;
107
+ ne_point = end_point;
108
+ }else{
109
+ sw_point = end_point;
110
+ ne_point = start_point;
111
+ }
112
+ ney = ne_point.y;
113
+ if (sw_point.y > ney){
114
+ ne_point.y = sw_point.y;
115
+ sw_point.y = ney;
116
+ }
117
+ latlngbounds =new GLatLngBounds(sw_point,ne_point);
118
+ select_region = new Rectangle(latlngbounds);
119
+ map.addOverlay(select_region);
120
+ $("start_lon").value=sw_point.x;
121
+ $("start_lat").value=sw_point.y;
122
+ $("end_lon").value=ne_point.x;
123
+ $("end_lat").value=ne_point.y;
124
+ }
125
+ });
126
+
127
+ }
128
+
129
+ function create_square(slat,slon,elat,elon,col){
130
+ var polygon = new GPolygon([
131
+ new GLatLng(slat,slon),
132
+ new GLatLng(slat,elon),
133
+ new GLatLng(elat,elon),
134
+ new GLatLng(elat,slon),
135
+ new GLatLng(slat,slon)
136
+ ], col, 1, 0.6, '#ccccff', 0.1);
137
+ return polygon;
138
+ }
139
+
140
+ function create_square2(sp,ep,col){
141
+ return create_square(sp.lat(),sp.lng(),ep.lat(),ep.lng(),col);
142
+ }
143
+
144
+ function showregions(obj){
145
+ var res=$("partial_covered").childNodes;
146
+ var j=0;
147
+ for(i=0;i<res.length;i++){
148
+ if(res[i].id!=undefined){
149
+ var slon = parseFloat(res[i].childNodes[1].innerHTML);
150
+ var slat = parseFloat(res[i].childNodes[3].innerHTML);
151
+ var elon = parseFloat(res[i].childNodes[5].innerHTML);
152
+ var elat = parseFloat(res[i].childNodes[7].innerHTML);
153
+ sp=new GLatLng(slat,slon);
154
+ ep=new GLatLng(elat,elon);
155
+ partial_covered[j]=create_square2(sp,ep,'#0000ff');
156
+ map.addOverlay(partial_covered[j]);
157
+ j++;
158
+ }
159
+ }
160
+ }
161
+
162
+ function show_regions(obj){
163
+ if(!obj.checked){
164
+ for(i=0;i<partial_covered.length;i++){
165
+ map.removeOverlay(partial_covered[i]);
166
+ }
167
+ }
168
+ else{
169
+ showregions();
170
+ }
171
+ }
172
+
173
+ function showpoints(){
174
+ var res=$("points").childNodes;
175
+ var j=0;
176
+ for(i=0;i<res.length;i++){
177
+ if(res[i].id!=undefined){
178
+ var lon = parseFloat(res[i].childNodes[1].innerHTML);
179
+ var lat = parseFloat(res[i].childNodes[3].innerHTML);
180
+ pt=new GLatLng(lat,lon);
181
+ points[j]=new GMarker(pt);
182
+ map.addOverlay(points[j]);
183
+ j++;
184
+ }
185
+ }
186
+ }
187
+
188
+ function show_points(obj){
189
+ if(!obj.checked){
190
+ for(i=0;i<points.length;i++){
191
+ map.removeOverlay(points[i]);
192
+ }
193
+ }
194
+ else{
195
+ showpoints();
196
+ }
197
+ }
198
+
199
+ </script>
@@ -0,0 +1,40 @@
1
+ <% stack=Array.new
2
+ ret=false
3
+ stack.push({:node=>@results.resulttree,:count=>0,:check=>false,:level=>0})
4
+ while stack.size>0 do
5
+ cur=stack[stack.size-1]
6
+ if cur[:check]==false then
7
+ if ret==true then
8
+ cur[:level].to_i.times do
9
+ -%>
10
+ &nbsp;&nbsp;
11
+ <% end
12
+ end
13
+ if cur[:node].path!="/" then
14
+ %>
15
+ <%=cur[:node].path.gsub(" ","")-%>
16
+ <%
17
+ end
18
+ cur[:check]=true
19
+ if cur[:node].children.size!=1 then -%>
20
+ (<%= cur[:node].count -%>)<br>
21
+ <%
22
+ ret=true
23
+ if cur[:node].children.size==0 && cur[:node].entries.size>0 then %>
24
+ <%= render :partial=>"show_results", :collection=>cur[:node].entries, :locals=>{:indent=>cur[:level].to_i+1} %>
25
+ <%end
26
+
27
+ else -%>/
28
+ <%
29
+ ret=false
30
+ end
31
+ end
32
+ if cur[:count]==cur[:node].children.size then
33
+ stack.pop
34
+ else
35
+ key=cur[:node].children.keys[cur[:count]]
36
+ stack.push({:node=>cur[:node].children[key],:count=>0,:check=>false,:level=>cur[:level]+1})
37
+ cur[:count]=cur[:count]+1
38
+ end
39
+ end
40
+ -%>