commonmeta-ruby 3.0.0
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +7 -0
- data/.github/workflows/build.yml +38 -0
- data/.github/workflows/changelog.yml +36 -0
- data/.github/workflows/codeql-analysis.yml +72 -0
- data/.github/workflows/rubocop.yml +50 -0
- data/.gitignore +59 -0
- data/.rubocop.yml +182 -0
- data/.rubocop_todo.yml +76 -0
- data/.tool-versions +1 -0
- data/CHANGELOG.md +124 -0
- data/CITATION +16 -0
- data/CITATION.cff +20 -0
- data/Gemfile +5 -0
- data/Gemfile.lock +270 -0
- data/LICENSE.md +21 -0
- data/README.md +733 -0
- data/Rakefile +13 -0
- data/bin/commonmeta +9 -0
- data/commonmeta.gemspec +68 -0
- data/lib/commonmeta/array.rb +13 -0
- data/lib/commonmeta/author_utils.rb +172 -0
- data/lib/commonmeta/cli.rb +70 -0
- data/lib/commonmeta/crossref_utils.rb +343 -0
- data/lib/commonmeta/doi_utils.rb +81 -0
- data/lib/commonmeta/metadata.rb +269 -0
- data/lib/commonmeta/metadata_utils.rb +184 -0
- data/lib/commonmeta/pubmed.rb +36 -0
- data/lib/commonmeta/readers/bibtex_reader.rb +62 -0
- data/lib/commonmeta/readers/cff_reader.rb +146 -0
- data/lib/commonmeta/readers/codemeta_reader.rb +90 -0
- data/lib/commonmeta/readers/crossref_reader.rb +186 -0
- data/lib/commonmeta/readers/crossref_xml_reader.rb +379 -0
- data/lib/commonmeta/readers/csl_reader.rb +85 -0
- data/lib/commonmeta/readers/datacite_reader.rb +169 -0
- data/lib/commonmeta/readers/npm_reader.rb +94 -0
- data/lib/commonmeta/readers/ris_reader.rb +66 -0
- data/lib/commonmeta/readers/schema_org_reader.rb +300 -0
- data/lib/commonmeta/schema_utils.rb +19 -0
- data/lib/commonmeta/string.rb +7 -0
- data/lib/commonmeta/utils.rb +1351 -0
- data/lib/commonmeta/version.rb +5 -0
- data/lib/commonmeta/whitelist_scrubber.rb +54 -0
- data/lib/commonmeta/writers/bibtex_writer.rb +36 -0
- data/lib/commonmeta/writers/cff_writer.rb +63 -0
- data/lib/commonmeta/writers/citation_writer.rb +14 -0
- data/lib/commonmeta/writers/codemeta_writer.rb +33 -0
- data/lib/commonmeta/writers/crossref_xml_writer.rb +11 -0
- data/lib/commonmeta/writers/csl_writer.rb +11 -0
- data/lib/commonmeta/writers/csv_writer.rb +26 -0
- data/lib/commonmeta/writers/datacite_writer.rb +94 -0
- data/lib/commonmeta/writers/jats_writer.rb +138 -0
- data/lib/commonmeta/writers/rdf_xml_writer.rb +11 -0
- data/lib/commonmeta/writers/ris_writer.rb +41 -0
- data/lib/commonmeta/writers/schema_org_writer.rb +61 -0
- data/lib/commonmeta/writers/turtle_writer.rb +11 -0
- data/lib/commonmeta/xml_converter.rb +14 -0
- data/lib/commonmeta.rb +35 -0
- data/resources/2008/09/xsd.xsl +997 -0
- data/resources/cff.json +1827 -0
- data/resources/commonmeta_v0.9.json +393 -0
- data/resources/crossref/AccessIndicators.xsd +47 -0
- data/resources/crossref/JATS-journalpublishing1-3d2-mathml3-elements.xsd +10130 -0
- data/resources/crossref/JATS-journalpublishing1-3d2-mathml3.xsd +48 -0
- data/resources/crossref/JATS-journalpublishing1-elements.xsd +8705 -0
- data/resources/crossref/JATS-journalpublishing1-mathml3-elements.xsd +8608 -0
- data/resources/crossref/JATS-journalpublishing1-mathml3.xsd +49 -0
- data/resources/crossref/JATS-journalpublishing1.xsd +6176 -0
- data/resources/crossref/clinicaltrials.xsd +61 -0
- data/resources/crossref/common5.3.1.xsd +1530 -0
- data/resources/crossref/crossref5.3.1.xsd +1949 -0
- data/resources/crossref/crossref_query_output3.0.xsd +1097 -0
- data/resources/crossref/fundref.xsd +49 -0
- data/resources/crossref/module-ali.xsd +39 -0
- data/resources/crossref/relations.xsd +444 -0
- data/resources/datacite-contributorType-v4.xsd +35 -0
- data/resources/datacite-dateType-v4.xsd +25 -0
- data/resources/datacite-descriptionType-v4.xsd +19 -0
- data/resources/datacite-funderIdentifierType-v4.xsd +15 -0
- data/resources/datacite-nameType-v4.xsd +10 -0
- data/resources/datacite-relatedIdentifierType-v4.xsd +34 -0
- data/resources/datacite-relationType-v4.xsd +49 -0
- data/resources/datacite-resourceType-v4.xsd +28 -0
- data/resources/datacite-titleType-v4.xsd +14 -0
- data/resources/datacite-v3.json +508 -0
- data/resources/datacite-v4.json +512 -0
- data/resources/kernel-3.0/include/datacite-contributorType-v3.xsd +33 -0
- data/resources/kernel-3.0/include/datacite-dateType-v3.xsd +21 -0
- data/resources/kernel-3.0/include/datacite-descriptionType-v3.xsd +17 -0
- data/resources/kernel-3.0/include/datacite-relatedIdentifierType-v3.xsd +27 -0
- data/resources/kernel-3.0/include/datacite-relationType-v3.xsd +33 -0
- data/resources/kernel-3.0/include/datacite-resourceType-v3.xsd +26 -0
- data/resources/kernel-3.0/include/datacite-titleType-v3.xsd +12 -0
- data/resources/kernel-3.0/include/xml.xsd +286 -0
- data/resources/kernel-3.0/metadata.xsd +377 -0
- data/resources/kernel-4/include/datacite-contributorType-v4.xsd +35 -0
- data/resources/kernel-4/include/datacite-dateType-v4.xsd +25 -0
- data/resources/kernel-4/include/datacite-descriptionType-v4.xsd +19 -0
- data/resources/kernel-4/include/datacite-funderIdentifierType-v4.xsd +16 -0
- data/resources/kernel-4/include/datacite-nameType-v4.xsd +10 -0
- data/resources/kernel-4/include/datacite-numberType-v4.xsd +12 -0
- data/resources/kernel-4/include/datacite-relatedIdentifierType-v4.xsd +34 -0
- data/resources/kernel-4/include/datacite-relationType-v4.xsd +51 -0
- data/resources/kernel-4/include/datacite-resourceType-v4.xsd +43 -0
- data/resources/kernel-4/include/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-4/include/xml.xsd +286 -0
- data/resources/kernel-4/metadata.xsd +707 -0
- data/resources/oecd/dfg-mappings.json +1866 -0
- data/resources/oecd/for-mappings.json +1099 -0
- data/resources/oecd/fos-mappings.json +198 -0
- data/resources/schema_org/jsonldcontext.json +7477 -0
- data/resources/spdx/licenses.json +5297 -0
- data/resources/xml.xsd +286 -0
- data/rubocop.sarif +0 -0
- data/sonar-project.properties +11 -0
- data/spec/array_spec.rb +22 -0
- data/spec/author_utils_spec.rb +132 -0
- data/spec/cli_spec.rb +309 -0
- data/spec/doi_utils_spec.rb +318 -0
- data/spec/find_from_format_spec.rb +144 -0
- data/spec/fixtures/CITATION.cff +83 -0
- data/spec/fixtures/aida.json +82 -0
- data/spec/fixtures/cgimp_package.json +18 -0
- data/spec/fixtures/cit_package.json +19 -0
- data/spec/fixtures/citeproc-no-author.json +26 -0
- data/spec/fixtures/citeproc-no-categories.json +21 -0
- data/spec/fixtures/citeproc.json +30 -0
- data/spec/fixtures/codemeta.json +86 -0
- data/spec/fixtures/codemeta_v2.json +86 -0
- data/spec/fixtures/crosscite.json +63 -0
- data/spec/fixtures/crossref.bib +14 -0
- data/spec/fixtures/crossref.json +572 -0
- data/spec/fixtures/crossref.ris +15 -0
- data/spec/fixtures/crossref.xml +606 -0
- data/spec/fixtures/datacite.json +86 -0
- data/spec/fixtures/datacite_software.json +21 -0
- data/spec/fixtures/datacite_software_missing_comma.json +18 -0
- data/spec/fixtures/datacite_software_overlapping_keys.json +18 -0
- data/spec/fixtures/datacite_software_version.json +74 -0
- data/spec/fixtures/edam_package.json +12 -0
- data/spec/fixtures/maremma/codemeta.json +36 -0
- data/spec/fixtures/pure.bib +14 -0
- data/spec/fixtures/pure.ris +15 -0
- data/spec/fixtures/pure.xml +188 -0
- data/spec/fixtures/ris_bug.ris +9 -0
- data/spec/fixtures/schema_4.0.xml +140 -0
- data/spec/fixtures/schema_org.json +49 -0
- data/spec/fixtures/schema_org_front-matter.json +32 -0
- data/spec/fixtures/schema_org_geolocation.json +82 -0
- data/spec/fixtures/schema_org_geoshape.json +550 -0
- data/spec/fixtures/schema_org_gtex.json +75 -0
- data/spec/fixtures/schema_org_list.json +12623 -0
- data/spec/fixtures/schema_org_tdl_iodp_invalid_authors.json +25 -0
- data/spec/fixtures/schema_org_topmed.json +53 -0
- data/spec/fixtures/schema_org_type_as_array.json +41 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref/default.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref/to_bibtex.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref/to_crossref_xml.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref/to_datacite.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref/to_schema_org.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref_xml/default.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref_xml/to_bibtex.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref_xml/to_crossref_xml.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref_xml/to_datacite.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref_xml/to_schema_org.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/default.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_bibtex.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_citation.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_crossref_xml.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_datacite.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_jats.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_schema_org.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/default.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/to_bibtex.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/to_citation.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/to_datacite.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/to_jats.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/to_schema_org.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/schema_org/default.yml +1098 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/schema_org/to_datacite.yml +1098 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/schema_org/to_schema_org.yml +1100 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/crossref.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/datacite.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/jalc.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/kisti.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/medra.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/op.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/authors_as_string/author.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/authors_as_string/no_author.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/authors_as_string/single_author.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/authors_as_string/with_organization.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/change_metadata_as_datacite_xml/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/crossref.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/datacite.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/jalc.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/kisti.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/medra.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/not_found.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/op.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/find_from_format_by_ID/crossref.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/find_from_format_by_ID/crossref_doi_not_url.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/find_from_format_by_ID/datacite.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/find_from_format_by_ID/datacite_doi_http.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/find_from_format_by_ID/unknown_DOI_registration_agency.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/hsh_to_fos_for_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/hsh_to_fos_for_with_schemeUri_in_hash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/hsh_to_fos_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/hsh_to_fos_no_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/name_to_fos_for_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/name_to_fos_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/name_to_fos_no_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/from_schema_org/with_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/from_schema_org_creators/with_affiliation.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/from_schema_org_creators/without_affiliation.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_cff_metadata/cff-converter-python.yml +200 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_cff_metadata/ruby-cff.yml +154 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_cff_metadata/ruby-cff_repository_url.yml +154 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_codemeta_metadata/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_codemeta_metadata/metadata_reports.yml +93 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/DOI_with_ORCID_ID.yml +337 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/DOI_with_SICI_DOI.yml +347 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/DOI_with_data_citation.yml +359 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/JaLC.yml +384 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/KISTI.yml +330 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/OP.yml +969 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/affiliation_is_space.yml +358 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/another_book.yml +312 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/another_book_chapter.yml +465 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/article_id_as_page_number.yml +276 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/author_literal.yml +492 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/book.yml +523 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/book_chapter.yml +377 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/book_chapter_with_RDF_for_container.yml +336 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/book_oup.yml +289 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/component.yml +289 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/dataset.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/dataset_usda.yml +341 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/date_in_future.yml +570 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/dissertation.yml +301 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/empty_given_name.yml +303 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/invalid_date.yml +307 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_article.yml +461 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_article_original_language_title.yml +276 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_article_with.yml +470 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_article_with_RDF_for_container.yml +519 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_article_with_funding.yml +456 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_issue.yml +270 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/mEDRA.yml +310 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/markup.yml +329 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/missing_creator.yml +307 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/multiple_issn.yml +393 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/multiple_titles.yml +265 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/multiple_titles_with_missing.yml +860 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/not_found_error.yml +209 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/peer_review.yml +287 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/posted_content.yml +326 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/posted_content_copernicus.yml +297 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/report_osti.yml +315 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/vor_with_url.yml +451 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/yet_another_book.yml +816 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/yet_another_book_chapter.yml +324 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_raw/journal_article.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datacite_metadata/dissertation.yml +152 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datacite_metadata/funding_references.yml +175 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datacite_metadata/subject_scheme.yml +328 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date/publication_date.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_date_parts/date.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_date_parts/year-month.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_date_parts/year.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_parts/date.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_parts/year-month.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_parts/year.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_parts/date.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_parts/year-month.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_parts/year.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datetime_from_time/future.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datetime_from_time/invalid.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datetime_from_time/nil.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datetime_from_time/past.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datetime_from_time/present.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_one_author/has_familyName.yml +133 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_one_author/has_name_in_display-order_with_ORCID.yml +153 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_one_author/is_organization.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_one_author/name_with_affiliation_crossref.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_one_author/only_familyName_and_givenName.yml +468 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/BlogPosting.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/BlogPosting_with_new_DOI.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/get_schema_org_metadata_front_matter/BlogPosting.yml +534 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/harvard_dataverse.yml +1838 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/pangaea.yml +468 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/upstream_blog.yml +885 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/zenodo.yml +583 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_series_information/only_title.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_series_information/title_and_pages.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_series_information/title_volume_and_pages.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_series_information/title_volume_issue_and_pages.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/github/github_as_cff_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/github/github_as_codemeta_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/github/github_from_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/github/github_from_url_cff_file.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/github/github_from_url_file.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/handle_input/DOI_RA_not_Crossref_or_DataCite.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/handle_input/unknown_DOI_prefix.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_comma.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_family_name.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_id.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_known_given_name.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_no_info.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_orcid_id.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_type_organization.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/json_schema_errors/is_valid.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_cc_url/not_found.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_cc_url/with_trailing_slash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_cc_url/with_trailing_slash_and_to_https.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/doi.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/doi_as_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/filename.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/ftp.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/invalid_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/sandbox_via_options.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/sandbox_via_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/string.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/url_with_utf-8.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_ids/doi.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_ids/url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_issn/from_array.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_issn/from_empty_array.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_issn/from_hash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_issn/from_string.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_url/uri.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_url/with_trailing_slash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_url/with_trailing_slash_and_to_https.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/array.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/array_of_strings.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/first.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/hash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/hash_with_array_value.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/nil.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/string.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/random_doi/decode_anothe_doi.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/random_doi/decode_doi.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/random_doi/encode_doi.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/sanitize/onlies_keep_specific_tags.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/sanitize/removes_a_tags.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/spdx/hsh_to_spdx_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/spdx/hsh_to_spdx_not_found.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/spdx/hsh_to_spdx_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/spdx/name_to_spdx_exists.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/spdx/name_to_spdx_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/to_schema_org/with_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/to_schema_org_identifiers/with_identifiers.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_https.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_sandbox.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_sandbox_https.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_with_spaces.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_wrong_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_www.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid_scheme/validate_orcid_scheme.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid_scheme/validate_orcid_scheme_https.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid_scheme/validate_orcid_scheme_trailing_slash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid_scheme/validate_orcid_scheme_www.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_url/DOI.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_url/ISSN.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_url/URL.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_url/string.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/BlogPosting.yml +81 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/Dataset.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/authors_with_affiliations.yml +186 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/climate_data.yml +74 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/from_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/keywords_subject_scheme.yml +149 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/text.yml +100 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/with_pages.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_cff/Collection_of_Jupyter_notebooks.yml +143 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_cff/SoftwareSourceCode_Zenodo.yml +150 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_cff/SoftwareSourceCode_also_Zenodo.yml +93 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_cff/ruby-cff.yml +154 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/Dataset.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/Journal_article.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/Journal_article_vancouver_style.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/Missing_author.yml +199 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/interactive_resource_without_dates.yml +75 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/software_w/version.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite.yml +76 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite_check_codemeta_v2.yml +76 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/another_schema_org_from_front-matter.yml +541 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/journal_article.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/journal_article_from_datacite.yml +85 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/posted_content.yml +283 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/schema_org_from_another_science_blog.yml +123 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/schema_org_from_front_matter.yml +477 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/schema_org_from_upstream_blog.yml +1025 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/Another_dataset.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/BlogPosting.yml +81 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/BlogPosting_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/Dataset.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/container_title.yml +153 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/interactive_resource_without_dates.yml +75 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/journal_article.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/keywords_subject_scheme.yml +149 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/missing_creator.yml +199 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/multiple_abstracts.yml +101 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/organization_author.yml +314 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/software.yml +90 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/software_w/version.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/with_only_first_page.yml +333 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/with_pages.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csv/climate_data.yml +74 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csv/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csv/text.yml +100 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csv/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csv/with_pages.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite/from_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite/with_ORCID_ID.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite_json/from_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite_json/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite_json/with_ORCID_ID.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite_json/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/Dataset_in_schema_4_0.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/Text_pass-thru.yml +106 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/book_chapter.yml +163 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/from_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/interactive_resource_without_dates.yml +75 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/with_ORCID_ID.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/with_editor.yml +355 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_rdf_xml/BlogPosting.yml +81 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_rdf_xml/BlogPosting_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_rdf_xml/journal_article.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_rdf_xml/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_rdf_xml/with_pages.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/BlogPosting.yml +81 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/BlogPosting_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/Dataset.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/alternate_name.yml +138 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/journal_article.yml +115 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/keywords_with_subject_scheme.yml +149 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/with_pages.yml +112 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Another_Schema_org_JSON.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Funding.yml +192 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Funding_OpenAIRE.yml +150 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Schema_org_JSON.yml +98 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Schema_org_JSON_Cyark.yml +160 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Schema_org_JSON_IsSupplementTo.yml +153 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/alternate_identifiers.yml +131 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/data_catalog.yml +136 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/geo_location_box.yml +181 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/interactive_resource_without_dates.yml +127 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/journal_article.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/maremma_schema_org_JSON.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/series_information.yml +174 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/subject_scheme.yml +199 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/subject_scheme_multiple_keywords.yml +201 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_turtle/BlogPosting.yml +81 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_turtle/BlogPosting_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_turtle/Dataset.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_turtle/journal_article.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_turtle/with_pages.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/default.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/to_bibtex.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/to_crossref_xml.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/to_datacite.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/to_schema_org.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref_xml/default.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref_xml/to_bibtex.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref_xml/to_crossref_xml.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref_xml/to_datacite.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref_xml/to_schema_org.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/default.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_bibtex.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_citation.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_crossref_xml.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_datacite.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_jats.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_schema_org.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/default.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/to_bibtex.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/to_citation.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/to_datacite.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/to_jats.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/to_schema_org.yml +172 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/schema_org/default.yml +1096 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/schema_org/to_datacite.yml +1096 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/schema_org/to_schema_org.yml +1098 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/crossref.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/datacite.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/jalc.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/kisti.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/medra.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/op.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/change_metadata_as_datacite_xml/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/crossref.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/datacite.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/jalc.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/kisti.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/medra.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/not_found.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/op.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/find_from_format_by_ID/crossref.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/find_from_format_by_ID/crossref_doi_not_url.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/find_from_format_by_ID/datacite.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/find_from_format_by_ID/datacite_doi_http.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/find_from_format_by_ID/unknown_DOI_registration_agency.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/hsh_to_fos_for_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/hsh_to_fos_for_with_schemeUri_in_hash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/hsh_to_fos_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/hsh_to_fos_no_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/name_to_fos_for_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/name_to_fos_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/name_to_fos_no_match.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/from_schema_org/with_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_cff_metadata/cff-converter-python.yml +200 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_cff_metadata/ruby-cff.yml +154 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_cff_metadata/ruby-cff_repository_url.yml +154 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_codemeta_metadata/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_codemeta_metadata/metadata_reports.yml +93 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/DOI_with_ORCID_ID.yml +337 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/DOI_with_SICI_DOI.yml +347 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/DOI_with_data_citation.yml +170 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/JaLC.yml +384 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/KISTI.yml +330 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/OP.yml +969 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/affiliation_is_space.yml +358 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/another_book.yml +312 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/another_book_chapter.yml +465 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/article_id_as_page_number.yml +276 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/author_literal.yml +492 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/book.yml +523 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/book_chapter.yml +377 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/book_chapter_with_RDF_for_container.yml +336 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/book_oup.yml +289 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/component.yml +289 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/dataset.yml +300 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/dataset_usda.yml +341 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/date_in_future.yml +570 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/dissertation.yml +301 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/empty_given_name.yml +303 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/invalid_date.yml +307 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_article.yml +461 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_article_original_language_title.yml +276 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_article_with.yml +908 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_article_with_RDF_for_container.yml +519 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_article_with_funding.yml +456 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_issue.yml +270 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/mEDRA.yml +310 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/markup.yml +329 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/missing_creator.yml +307 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/multiple_issn.yml +393 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/multiple_titles.yml +265 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/multiple_titles_with_missing.yml +860 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/not_found_error.yml +209 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/peer_review.yml +287 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/posted_content.yml +326 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/posted_content_copernicus.yml +297 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/report_osti.yml +315 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/vor_with_url.yml +451 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/yet_another_book.yml +816 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/yet_another_book_chapter.yml +324 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_raw/journal_article.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datacite_metadata/dissertation.yml +152 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datacite_metadata/funding_references.yml +175 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datacite_metadata/subject_scheme.yml +328 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date/publication_date.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_date_parts/date.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_date_parts/year-month.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_date_parts/year.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_parts/date.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_parts/year-month.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_parts/year.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_parts/date.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_parts/year-month.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_parts/year.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datetime_from_time/future.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datetime_from_time/invalid.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datetime_from_time/nil.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datetime_from_time/past.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datetime_from_time/present.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_one_author/has_familyName.yml +133 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_one_author/has_name_in_display-order_with_ORCID.yml +153 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_one_author/name_with_affiliation_crossref.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_one_author/only_familyName_and_givenName.yml +467 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/BlogPosting.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/BlogPosting_with_new_DOI.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/get_schema_org_metadata_front_matter/BlogPosting.yml +534 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/harvard_dataverse.yml +1838 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/pangaea.yml +467 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/upstream_blog.yml +885 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/zenodo.yml +583 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_series_information/only_title.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_series_information/title_and_pages.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_series_information/title_volume_and_pages.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_series_information/title_volume_issue_and_pages.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/github/github_as_cff_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/github/github_as_codemeta_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/github/github_from_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/github/github_from_url_cff_file.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/github/github_from_url_file.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/handle_input/DOI_RA_not_Crossref_or_DataCite.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/handle_input/unknown_DOI_prefix.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/json_schema_errors/is_valid.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_cc_url/not_found.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_cc_url/with_trailing_slash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_cc_url/with_trailing_slash_and_to_https.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/doi.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/doi_as_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/filename.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/ftp.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/invalid_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/sandbox_via_options.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/sandbox_via_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/string.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/url_with_utf-8.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_issn/from_array.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_issn/from_empty_array.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_issn/from_hash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_issn/from_string.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_url/uri.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_url/with_trailing_slash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_url/with_trailing_slash_and_to_https.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/array.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/array_of_strings.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/first.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/hash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/hash_with_array_value.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/nil.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/string.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/random_doi/decode_anothe_doi.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/random_doi/decode_doi.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/random_doi/encode_doi.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/sanitize/onlies_keep_specific_tags.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/sanitize/removes_a_tags.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/spdx/hsh_to_spdx_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/spdx/hsh_to_spdx_not_found.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/spdx/hsh_to_spdx_url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/spdx/name_to_spdx_exists.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/spdx/name_to_spdx_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/to_schema_org/with_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/to_schema_org_identifiers/with_identifiers.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_https.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_sandbox.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_sandbox_https.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_with_spaces.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_wrong_id.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_www.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid_scheme/validate_orcid_scheme.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid_scheme/validate_orcid_scheme_https.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid_scheme/validate_orcid_scheme_trailing_slash.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid_scheme/validate_orcid_scheme_www.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_url/DOI.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_url/ISSN.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_url/URL.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_url/string.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/BlogPosting.yml +81 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/Dataset.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/authors_with_affiliations.yml +186 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/climate_data.yml +74 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/from_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/keywords_subject_scheme.yml +149 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/text.yml +100 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/with_pages.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_cff/Collection_of_Jupyter_notebooks.yml +143 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_cff/SoftwareSourceCode_Zenodo.yml +150 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_cff/SoftwareSourceCode_also_Zenodo.yml +93 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_cff/ruby-cff.yml +154 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/Dataset.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/Journal_article.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/Journal_article_vancouver_style.yml +299 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/Missing_author.yml +199 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/interactive_resource_without_dates.yml +75 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/software_w/version.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite.yml +76 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite_check_codemeta_v2.yml +76 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/another_schema_org_from_front-matter.yml +541 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/journal_article.yml +55 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/journal_article_from_datacite.yml +85 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/posted_content.yml +283 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/schema_org_from_another_science_blog.yml +123 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/schema_org_from_front_matter.yml +477 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/schema_org_from_upstream_blog.yml +1025 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/Another_dataset.yml +110 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/BlogPosting.yml +81 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/BlogPosting_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/Dataset.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/container_title.yml +153 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/interactive_resource_without_dates.yml +75 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/journal_article.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/keywords_subject_scheme.yml +149 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/missing_creator.yml +199 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/multiple_abstracts.yml +101 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/organization_author.yml +314 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/software.yml +90 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/software_w/version.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/with_only_first_page.yml +333 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/with_pages.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csv/climate_data.yml +74 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csv/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csv/text.yml +100 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csv/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csv/with_pages.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/dissertation.yml +218 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/from_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/journal_article.yml +407 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/with_ORCID_ID.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/Dataset_in_schema_4_0.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/Text_pass-thru.yml +106 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/book_chapter.yml +163 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/from_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/interactive_resource_without_dates.yml +75 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/with_ORCID_ID.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/with_data_citation.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/with_editor.yml +355 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_rdf_xml/BlogPosting.yml +81 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_rdf_xml/BlogPosting_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_rdf_xml/journal_article.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_rdf_xml/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_rdf_xml/with_pages.yml +228 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/BlogPosting.yml +81 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/BlogPosting_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/Dataset.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/alternate_name.yml +138 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/journal_article.yml +115 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/keywords_with_subject_scheme.yml +149 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/maremma.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/with_pages.yml +112 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Another_Schema_org_JSON.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Funding.yml +192 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Funding_OpenAIRE.yml +150 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Schema_org_JSON.yml +98 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Schema_org_JSON_Cyark.yml +160 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Schema_org_JSON_IsSupplementTo.yml +153 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/alternate_identifiers.yml +131 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/data_catalog.yml +136 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/geo_location_box.yml +181 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/interactive_resource_without_dates.yml +127 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/journal_article.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/maremma_schema_org_JSON.yml +86 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/series_information.yml +174 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/subject_scheme.yml +199 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/subject_scheme_multiple_keywords.yml +201 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_turtle/BlogPosting.yml +81 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_turtle/BlogPosting_schema_org.yml +530 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_turtle/Dataset.yml +120 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_turtle/journal_article.yml +247 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_turtle/with_pages.yml +228 -0
- data/spec/fixtures/vivli.xml +17 -0
- data/spec/metadata_spec.rb +147 -0
- data/spec/readers/bibtex_reader_spec.rb +58 -0
- data/spec/readers/cff_reader_spec.rb +148 -0
- data/spec/readers/codemeta_reader_spec.rb +116 -0
- data/spec/readers/crossref_reader_spec.rb +919 -0
- data/spec/readers/crossref_xml_reader_spec.rb +948 -0
- data/spec/readers/csl_reader_spec.rb +61 -0
- data/spec/readers/datacite_reader_spec.rb +156 -0
- data/spec/readers/npm_reader_spec.rb +69 -0
- data/spec/readers/ris_reader_spec.rb +70 -0
- data/spec/readers/schema_org_reader_spec.rb +416 -0
- data/spec/schema_utils_spec.rb +16 -0
- data/spec/spec_helper.rb +96 -0
- data/spec/utils_spec.rb +631 -0
- data/spec/writers/bibtex_writer_spec.rb +160 -0
- data/spec/writers/cff_writer_spec.rb +118 -0
- data/spec/writers/citation_writer_spec.rb +51 -0
- data/spec/writers/codemeta_writer_spec.rb +47 -0
- data/spec/writers/crossref_xml_writer_spec.rb +173 -0
- data/spec/writers/csl_writer_spec.rb +291 -0
- data/spec/writers/csv_writer_spec.rb +82 -0
- data/spec/writers/datacite_writer_spec.rb +150 -0
- data/spec/writers/jats_writer_spec.rb +210 -0
- data/spec/writers/rdf_xml_writer_spec.rb +91 -0
- data/spec/writers/ris_writer_spec.rb +206 -0
- data/spec/writers/schema_org_writer_spec.rb +301 -0
- data/spec/writers/turtle_writer_spec.rb +85 -0
- metadata +1514 -0
data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/journal_article.yml
ADDED
@@ -0,0 +1,247 @@
|
|
1
|
+
---
|
2
|
+
http_interactions:
|
3
|
+
- request:
|
4
|
+
method: get
|
5
|
+
uri: https://api.crossref.org/works/10.7554/elife.01567
|
6
|
+
body:
|
7
|
+
encoding: UTF-8
|
8
|
+
string: ''
|
9
|
+
headers:
|
10
|
+
Connection:
|
11
|
+
- close
|
12
|
+
Host:
|
13
|
+
- api.crossref.org
|
14
|
+
User-Agent:
|
15
|
+
- http.rb/5.1.1
|
16
|
+
response:
|
17
|
+
status:
|
18
|
+
code: 200
|
19
|
+
message: OK
|
20
|
+
headers:
|
21
|
+
Date:
|
22
|
+
- Sun, 19 Mar 2023 17:42:49 GMT
|
23
|
+
Content-Type:
|
24
|
+
- application/json
|
25
|
+
Transfer-Encoding:
|
26
|
+
- chunked
|
27
|
+
Access-Control-Expose-Headers:
|
28
|
+
- Link
|
29
|
+
Access-Control-Allow-Headers:
|
30
|
+
- X-Requested-With, Accept, Accept-Encoding, Accept-Charset, Accept-Language,
|
31
|
+
Accept-Ranges, Cache-Control
|
32
|
+
Access-Control-Allow-Origin:
|
33
|
+
- "*"
|
34
|
+
Server:
|
35
|
+
- Jetty(9.4.40.v20210413)
|
36
|
+
X-Ratelimit-Limit:
|
37
|
+
- '50'
|
38
|
+
X-Ratelimit-Interval:
|
39
|
+
- 1s
|
40
|
+
X-Api-Pool:
|
41
|
+
- public
|
42
|
+
X-Rate-Limit-Limit:
|
43
|
+
- '50'
|
44
|
+
X-Rate-Limit-Interval:
|
45
|
+
- 1s
|
46
|
+
Permissions-Policy:
|
47
|
+
- interest-cohort=()
|
48
|
+
Connection:
|
49
|
+
- close
|
50
|
+
body:
|
51
|
+
encoding: UTF-8
|
52
|
+
string: '{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,1,28]],"date-time":"2023-01-28T13:31:01Z","timestamp":1674912661129},"reference-count":27,"publisher":"eLife
|
53
|
+
Sciences Publications, Ltd","license":[{"start":{"date-parts":[[2014,2,11]],"date-time":"2014-02-11T00:00:00Z","timestamp":1392076800000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/3.0\/"},{"start":{"date-parts":[[2014,2,11]],"date-time":"2014-02-11T00:00:00Z","timestamp":1392076800000},"content-version":"am","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/3.0\/"},{"start":{"date-parts":[[2014,2,11]],"date-time":"2014-02-11T00:00:00Z","timestamp":1392076800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/3.0\/"},{"start":{"date-parts":[[2014,2,11]],"date-time":"2014-02-11T00:00:00Z","timestamp":1392076800000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/3.0\/"},{"start":{"date-parts":[[2014,2,11]],"date-time":"2014-02-11T00:00:00Z","timestamp":1392076800000},"content-version":"am","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/3.0\/"},{"start":{"date-parts":[[2014,2,11]],"date-time":"2014-02-11T00:00:00Z","timestamp":1392076800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/3.0\/"}],"funder":[{"name":"SystemsX"},{"name":"EMBO
|
54
|
+
longterm post-doctoral fellowships"},{"name":"Marie Heim-Voegtlin"},{"DOI":"10.13039\/501100006390","name":"University
|
55
|
+
of Lausanne","doi-asserted-by":"crossref"},{"name":"SystemsX"},{"DOI":"10.13039\/501100003043","name":"EMBO","doi-asserted-by":"publisher"},{"DOI":"10.13039\/501100001711","name":"Swiss
|
56
|
+
National Science Foundation","doi-asserted-by":"publisher"},{"DOI":"10.13039\/501100006390","name":"University
|
57
|
+
of Lausanne","doi-asserted-by":"crossref"}],"content-domain":{"domain":["www.elifesciences.org"],"crossmark-restriction":false},"short-container-title":[],"abstract":"<jats:p>Among
|
58
|
+
various advantages, their small size makes model organisms preferred subjects
|
59
|
+
of investigation. Yet, even in model systems detailed analysis of numerous
|
60
|
+
developmental processes at cellular level is severely hampered by their scale.
|
61
|
+
For instance, secondary growth of Arabidopsis hypocotyls creates a radial
|
62
|
+
pattern of highly specialized tissues that comprises several thousand cells
|
63
|
+
starting from a few dozen. This dynamic process is difficult to follow because
|
64
|
+
of its scale and because it can only be investigated invasively, precluding
|
65
|
+
comprehensive understanding of the cell proliferation, differentiation, and
|
66
|
+
patterning events involved. To overcome such limitation, we established an
|
67
|
+
automated quantitative histology approach. We acquired hypocotyl cross-sections
|
68
|
+
from tiled high-resolution images and extracted their information content
|
69
|
+
using custom high-throughput image processing and segmentation. Coupled with
|
70
|
+
automated cell type recognition through machine learning, we could establish
|
71
|
+
a cellular resolution atlas that reveals vascular morphodynamics during secondary
|
72
|
+
growth, for example equidistant phloem pole formation.<\/jats:p>","DOI":"10.7554\/elife.01567","type":"journal-article","created":{"date-parts":[[2014,2,11]],"date-time":"2014-02-11T16:29:04Z","timestamp":1392136144000},"source":"Crossref","is-referenced-by-count":27,"title":["Automated
|
73
|
+
quantitative histology reveals vascular morphodynamics during Arabidopsis
|
74
|
+
hypocotyl secondary growth"],"prefix":"10.7554","volume":"3","author":[{"given":"Martial","family":"Sankar","sequence":"first","affiliation":[{"name":"Department
|
75
|
+
of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland"}]},{"given":"Kaisa","family":"Nieminen","sequence":"additional","affiliation":[{"name":"Department
|
76
|
+
of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland"}]},{"given":"Laura","family":"Ragni","sequence":"additional","affiliation":[{"name":"Department
|
77
|
+
of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland"}]},{"given":"Ioannis","family":"Xenarios","sequence":"additional","affiliation":[{"name":"Vital-IT,
|
78
|
+
Swiss Institute of Bioinformatics, Lausanne, Switzerland"}]},{"given":"Christian
|
79
|
+
S","family":"Hardtke","sequence":"additional","affiliation":[{"name":"Department
|
80
|
+
of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland"}]}],"member":"4374","published-online":{"date-parts":[[2014,2,11]]},"reference":[{"key":"bib1","doi-asserted-by":"publisher","first-page":"181","DOI":"10.1038\/nature02100","article-title":"APL
|
81
|
+
regulates vascular tissue identity in Arabidopsis","volume":"426","author":"Bonke","year":"2003","journal-title":"Nature"},{"key":"bib2","doi-asserted-by":"publisher","first-page":"413","DOI":"10.1534\/genetics.109.104976","article-title":"In
|
82
|
+
the beginning was the worm","volume":"182","author":"Brenner","year":"2009","journal-title":"Genetics"},{"key":"bib3","doi-asserted-by":"publisher","first-page":"594","DOI":"10.1034\/j.1399-3054.2002.1140413.x","article-title":"Secondary
|
83
|
+
xylem development in Arabidopsis: a model for wood formation","volume":"114","author":"Chaffey","year":"2002","journal-title":"Physiologia
|
84
|
+
Plantarum"},{"key":"bib4","doi-asserted-by":"publisher","first-page":"2119","DOI":"10.1162\/089976601750399335","article-title":"Training
|
85
|
+
nu-support vector classifiers: theory and algorithms","volume":"13","author":"Chang","year":"2001","journal-title":"Neural
|
86
|
+
computation"},{"key":"bib5","doi-asserted-by":"crossref","first-page":"273","DOI":"10.1007\/BF00994018","article-title":"Support-vector
|
87
|
+
Networks","volume":"20","author":"Cortes","year":"1995","journal-title":"Machine
|
88
|
+
Learning"},{"key":"bib6","doi-asserted-by":"crossref","first-page":"71","DOI":"10.1242\/dev.119.1.71","article-title":"Cellular
|
89
|
+
organisation of the Arabidopsis thaliana root","volume":"119","author":"Dolan","year":"1993","journal-title":"Development"},{"key":"bib7","doi-asserted-by":"publisher","first-page":"1097","DOI":"10.1016\/j.semcdb.2009.09.009","article-title":"Stem
|
90
|
+
cell function during plant vascular development","volume":"20","author":"Elo","year":"2009","journal-title":"Seminars
|
91
|
+
in Cell & Developmental Biology"},{"key":"bib8","doi-asserted-by":"publisher","first-page":"2224","DOI":"10.1242\/dev.091314","article-title":"WOX4
|
92
|
+
and WOX14 act downstream of the PXY receptor kinase to regulate plant vascular
|
93
|
+
proliferation independently of any role in vascular organisation","volume":"140","author":"Etchells","year":"2013","journal-title":"Development"},{"key":"bib9","doi-asserted-by":"publisher","first-page":"e1002997","DOI":"10.1371\/journal.pgen.1002997","article-title":"Plant
|
94
|
+
vascular cell division is maintained by an interaction between PXY and ethylene
|
95
|
+
signalling","volume":"8","author":"Etchells","year":"2012","journal-title":"PLOS
|
96
|
+
Genetics"},{"key":"bib10","doi-asserted-by":"publisher","first-page":"370","DOI":"10.1038\/msb.2010.25","article-title":"Clustering
|
97
|
+
phenotype populations by genome-wide RNAi and multiparametric imaging","volume":"6","author":"Fuchs","year":"2010","journal-title":"Molecular
|
98
|
+
Systems Biology"},{"key":"bib11","doi-asserted-by":"publisher","first-page":"60","DOI":"10.1016\/j.biosystems.2012.07.004","article-title":"BaSAR-A
|
99
|
+
tool in R for frequency detection","volume":"110","author":"Granqvist","year":"2012","journal-title":"Bio
|
100
|
+
Systems"},{"key":"bib12","doi-asserted-by":"publisher","first-page":"55","DOI":"10.1016\/j.pbi.2005.11.013","article-title":"Developmental
|
101
|
+
mechanisms regulating secondary growth in woody plants","volume":"9","author":"Groover","year":"2006","journal-title":"Current
|
102
|
+
Opinion in Plant Biology"},{"key":"bib13","doi-asserted-by":"publisher","first-page":"2618","DOI":"10.1105\/tpc.110.076083","article-title":"TDIF
|
103
|
+
peptide signaling regulates vascular stem cell proliferation via the WOX4
|
104
|
+
homeobox gene in Arabidopsis","volume":"22","author":"Hirakawa","year":"2010","journal-title":"Plant
|
105
|
+
Cell"},{"key":"bib14","doi-asserted-by":"publisher","first-page":"15208","DOI":"10.1073\/pnas.0808444105","article-title":"Non-cell-autonomous
|
106
|
+
control of vascular stem cell fate by a CLE peptide\/receptor system","volume":"105","author":"Hirakawa","year":"2008","journal-title":"Proceedings
|
107
|
+
of the National Academy of Sciences of the United States of America"},{"key":"bib15","doi-asserted-by":"publisher","first-page":"263","DOI":"10.1016\/0092-8674(89)90900-8","article-title":"Arabidopsis,
|
108
|
+
a useful weed","volume":"56","author":"Meyerowitz","year":"1989","journal-title":"Cell"},{"key":"bib16","doi-asserted-by":"publisher","first-page":"1482","DOI":"10.1126\/science.1066609","article-title":"Plants
|
109
|
+
compared to animals: the broadest comparative study of development","volume":"295","author":"Meyerowitz","year":"2002","journal-title":"Science"},{"key":"bib17","doi-asserted-by":"publisher","first-page":"653","DOI":"10.1104\/pp.104.040212","article-title":"A
|
110
|
+
weed for wood? Arabidopsis as a genetic model for xylem development","volume":"135","author":"Nieminen","year":"2004","journal-title":"Plant
|
111
|
+
Physiol"},{"key":"bib18","doi-asserted-by":"publisher","first-page":"1565","DOI":"10.1038\/nbt1206-1565","article-title":"What
|
112
|
+
is a support vector machine?","volume":"24","author":"Noble","year":"2006","journal-title":"Nature
|
113
|
+
Biotechnology"},{"key":"bib19","doi-asserted-by":"publisher","first-page":"1516","DOI":"10.1073\/pnas.77.3.1516","article-title":"Classification
|
114
|
+
of cultured mammalian cells by shape analysis and pattern recognition","volume":"77","author":"Olson","year":"1980","journal-title":"Proceedings
|
115
|
+
of the National Academy of Sciences of the United States of America"},{"key":"bib20","doi-asserted-by":"publisher","first-page":"979","DOI":"10.1093\/bioinformatics\/btq046","article-title":"EBImage\u2013an
|
116
|
+
R package for image processing with applications to cellular phenotypes","volume":"26","author":"Pau","year":"2010","journal-title":"Bioinformatics"},{"key":"bib21","doi-asserted-by":"publisher","first-page":"1322","DOI":"10.1105\/tpc.111.084020","article-title":"Mobile
|
117
|
+
gibberellin directly stimulates Arabidopsis hypocotyl xylem expansion","volume":"23","author":"Ragni","year":"2011","journal-title":"Plant
|
118
|
+
Cell"},{"key":"bib22","doi-asserted-by":"publisher","article-title":"Data
|
119
|
+
from: Automated quantitative histology reveals vascular morphodynamics during
|
120
|
+
Arabidopsis hypocotyl secondary growth","author":"Sankar","year":"2014","journal-title":"Dryad
|
121
|
+
Digital Repository","DOI":"10.5061\/dryad.b835k"},{"key":"bib23","doi-asserted-by":"publisher","first-page":"458","DOI":"10.1016\/j.cub.2008.02.070","article-title":"Flowering
|
122
|
+
as a condition for xylem expansion in Arabidopsis hypocotyl and root","volume":"18","author":"Sibout","year":"2008","journal-title":"Current
|
123
|
+
Biology"},{"key":"bib24","doi-asserted-by":"publisher","first-page":"577","DOI":"10.1111\/j.1469-8137.2010.03236.x","article-title":"Evolution
|
124
|
+
of development of vascular cambia and secondary growth","volume":"186","author":"Spicer","year":"2010","journal-title":"The
|
125
|
+
New Phytologist"},{"key":"bib25","doi-asserted-by":"publisher","first-page":"659","DOI":"10.1007\/s00138-011-0345-9","article-title":"Cell
|
126
|
+
morphology classification and clutter mitigation in phase-contrast microscopy
|
127
|
+
images using machine learning","volume":"23","author":"Theriault","year":"2012","journal-title":"Machine
|
128
|
+
Vision and Applications"},{"key":"bib26","doi-asserted-by":"publisher","first-page":"439","DOI":"10.1016\/j.cell.2012.02.048","article-title":"Mechanical
|
129
|
+
stress acts via katanin to amplify differences in growth rate between adjacent
|
130
|
+
cells in Arabidopsis","volume":"149","author":"Uyttewaal","year":"2012","journal-title":"Cell"},{"key":"bib27","doi-asserted-by":"publisher","first-page":"860","DOI":"10.1038\/ncb2764","article-title":"A
|
131
|
+
screen for morphological complexity identifies regulators of switch-like transitions
|
132
|
+
between discrete cell shapes","volume":"15","author":"Yin","year":"2013","journal-title":"Nature
|
133
|
+
Cell Biology"}],"container-title":["eLife"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/cdn.elifesciences.org\/articles\/01567\/elife-01567-v1.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/cdn.elifesciences.org\/articles\/01567\/elife-01567-v1.xml","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2022,3,26]],"date-time":"2022-03-26T09:21:50Z","timestamp":1648286510000},"score":1,"resource":{"primary":{"URL":"https:\/\/elifesciences.org\/articles\/01567"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2014,2,11]]},"references-count":27,"alternative-id":["10.7554\/eLife.01567"],"URL":"http:\/\/dx.doi.org\/10.7554\/elife.01567","archive":["CLOCKSS"],"relation":{"is-supplemented-by":[{"id-type":"doi","id":"10.5061\/dryad.b835k","asserted-by":"subject"}]},"ISSN":["2050-084X"],"issn-type":[{"value":"2050-084X","type":"electronic"}],"subject":["General
|
134
|
+
Immunology and Microbiology","General Biochemistry, Genetics and Molecular
|
135
|
+
Biology","General Medicine","General Neuroscience"],"published":{"date-parts":[[2014,2,11]]},"assertion":[{"value":"2013-09-20","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication
|
136
|
+
History"}},{"value":"2013-12-24","order":1,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication
|
137
|
+
History"}},{"value":"2014-02-11","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication
|
138
|
+
History"}}]}}'
|
139
|
+
recorded_at: Sun, 19 Mar 2023 17:42:49 GMT
|
140
|
+
- request:
|
141
|
+
method: get
|
142
|
+
uri: https://api.crossref.org/members/4374
|
143
|
+
body:
|
144
|
+
encoding: UTF-8
|
145
|
+
string: ''
|
146
|
+
headers:
|
147
|
+
Connection:
|
148
|
+
- close
|
149
|
+
Host:
|
150
|
+
- api.crossref.org
|
151
|
+
User-Agent:
|
152
|
+
- http.rb/5.1.1
|
153
|
+
response:
|
154
|
+
status:
|
155
|
+
code: 200
|
156
|
+
message: OK
|
157
|
+
headers:
|
158
|
+
Date:
|
159
|
+
- Sun, 19 Mar 2023 17:42:50 GMT
|
160
|
+
Content-Type:
|
161
|
+
- application/json
|
162
|
+
Transfer-Encoding:
|
163
|
+
- chunked
|
164
|
+
Access-Control-Expose-Headers:
|
165
|
+
- Link
|
166
|
+
Access-Control-Allow-Headers:
|
167
|
+
- X-Requested-With, Accept, Accept-Encoding, Accept-Charset, Accept-Language,
|
168
|
+
Accept-Ranges, Cache-Control
|
169
|
+
Access-Control-Allow-Origin:
|
170
|
+
- "*"
|
171
|
+
Server:
|
172
|
+
- Jetty(9.4.40.v20210413)
|
173
|
+
X-Ratelimit-Limit:
|
174
|
+
- '50'
|
175
|
+
X-Ratelimit-Interval:
|
176
|
+
- 1s
|
177
|
+
X-Api-Pool:
|
178
|
+
- public
|
179
|
+
X-Rate-Limit-Limit:
|
180
|
+
- '50'
|
181
|
+
X-Rate-Limit-Interval:
|
182
|
+
- 1s
|
183
|
+
Permissions-Policy:
|
184
|
+
- interest-cohort=()
|
185
|
+
Connection:
|
186
|
+
- close
|
187
|
+
body:
|
188
|
+
encoding: UTF-8
|
189
|
+
string: '{"status":"ok","message-type":"member","message-version":"1.0.0","message":{"last-status-check-time":1679189264013,"primary-name":"eLife
|
190
|
+
Sciences Publications, Ltd","counts":{"current-dois":14448,"backfile-dois":28272,"total-dois":42720},"breakdowns":{"dois-by-issued-year":[[2021,7221],[2022,6527],[2020,6182],[2019,4846],[2017,4117],[2018,4053],[2016,3510],[2015,2808],[2014,1786],[2013,811],[2023,700],[2012,159]]},"prefixes":["10.7554"],"coverage":{"affiliations-current":0.9873338870431894,"similarity-checking-current":0.0,"descriptions-current":0.0,"ror-ids-current":0.5564091915836102,"funders-backfile":0.3053551216751556,"licenses-backfile":0.9999646293152235,"funders-current":0.2924280177187154,"affiliations-backfile":0.9898132427843803,"resource-links-backfile":0.3482951329937748,"orcids-backfile":0.8474108658743633,"update-policies-current":0.3181755260243632,"ror-ids-backfile":0.002192982456140351,"orcids-current":0.946843853820598,"similarity-checking-backfile":0.0,"references-backfile":0.3393817204301075,"descriptions-backfile":0.0,"award-numbers-backfile":0.2867501414827391,"update-policies-backfile":0.070776740237691,"licenses-current":1.0,"award-numbers-current":0.2825996677740864,"abstracts-backfile":0.34065506508206,"resource-links-current":0.3181755260243632,"abstracts-current":0.3169988925802879,"references-current":0.3066168327796235},"prefix":[{"name":"eLife
|
191
|
+
Sciences Publications, Ltd.","value":"10.7554"}],"id":4374,"tokens":["elife","sciences","publications","ltd"],"counts-type":{"all":{"peer-review":28227,"journal-article":14446,"journal":1,"component":143802,"posted-content":47},"backfile":{"peer-review":18423,"journal-article":9849},"current":{"peer-review":9804,"journal-article":4597,"posted-content":47}},"coverage-type":{"all":{"peer-review":{"last-status-check-time":1679189264013,"affiliations":0.9939419704538208,"abstracts":0.0,"orcids":0.8838700534948808,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.2097282743472562,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1679189264013,"affiliations":0.9792330056763118,"abstracts":0.9804790253357331,"orcids":0.8751211408002215,"licenses":0.9999307766855877,"references":0.9708569846324242,"funders":0.890073376713277,"similarity-checking":0.0,"award-numbers":0.8438322026858646,"ror-ids":0.1509760487332133,"update-policies":0.4567354284923162,"resource-links":0.9998615533711754,"descriptions":0.0},"journal":{"last-status-check-time":1679189264013,"affiliations":0.0,"abstracts":0.0,"orcids":0.0,"licenses":0.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"component":{"last-status-check-time":1679189264013,"affiliations":0.0,"abstracts":0.0,"orcids":0.0,"licenses":4.867804342081473E-4,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"posted-content":{"last-status-check-time":1679189264013,"affiliations":1.0,"abstracts":1.0,"orcids":1.0,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0}},"backfile":{"peer-review":{"last-status-check-time":1679189264013,"affiliations":0.997123161265809,"abstracts":0.0,"orcids":0.8637029799706888,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.003365358519242252,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1679189264013,"affiliations":0.9761397096151894,"abstracts":0.9778657731749416,"orcids":0.8169357295156869,"licenses":0.9998984668494263,"references":0.9742105797542898,"funders":0.8765356889024266,"similarity-checking":0.0,"award-numbers":0.8231292517006803,"ror-ids":0.0,"update-policies":0.2031678342978983,"resource-links":0.9997969336988527,"descriptions":0.0}},"current":{"peer-review":{"last-status-check-time":1679189264013,"affiliations":0.9879640962872297,"abstracts":0.0,"orcids":0.9217666258669931,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.5975112199102407,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1679189264013,"affiliations":0.9858603437024146,"abstracts":0.9860778768762236,"orcids":0.999782466826191,"licenses":1.0,"references":0.963671959973896,"funders":0.9190776593430497,"similarity-checking":0.0,"award-numbers":0.888187948662171,"ror-ids":0.4744398520774418,"update-policies":1.0,"resource-links":1.0,"descriptions":0.0},"posted-content":{"last-status-check-time":1679189264013,"affiliations":1.0,"abstracts":1.0,"orcids":1.0,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0}}},"flags":{"deposits-abstracts-current":true,"deposits-orcids-current":true,"deposits":true,"deposits-affiliations-backfile":true,"deposits-update-policies-backfile":true,"deposits-similarity-checking-backfile":false,"deposits-award-numbers-current":true,"deposits-resource-links-current":true,"deposits-ror-ids-current":true,"deposits-articles":true,"deposits-affiliations-current":true,"deposits-funders-current":true,"deposits-references-backfile":true,"deposits-ror-ids-backfile":true,"deposits-abstracts-backfile":true,"deposits-licenses-backfile":true,"deposits-award-numbers-backfile":true,"deposits-descriptions-current":false,"deposits-references-current":true,"deposits-resource-links-backfile":true,"deposits-descriptions-backfile":false,"deposits-orcids-backfile":true,"deposits-funders-backfile":true,"deposits-update-policies-current":true,"deposits-similarity-checking-current":false,"deposits-licenses-current":true},"location":"Cambridge,
|
192
|
+
United Kingdom","names":["eLife Sciences Publications, Ltd","eLife Sciences
|
193
|
+
Publications, Ltd."]}}'
|
194
|
+
recorded_at: Sun, 19 Mar 2023 17:42:49 GMT
|
195
|
+
- request:
|
196
|
+
method: get
|
197
|
+
uri: https://doi.org/ra/10.7554
|
198
|
+
body:
|
199
|
+
encoding: UTF-8
|
200
|
+
string: ''
|
201
|
+
headers:
|
202
|
+
Connection:
|
203
|
+
- close
|
204
|
+
Host:
|
205
|
+
- doi.org
|
206
|
+
User-Agent:
|
207
|
+
- http.rb/5.1.1
|
208
|
+
response:
|
209
|
+
status:
|
210
|
+
code: 200
|
211
|
+
message: OK
|
212
|
+
headers:
|
213
|
+
Date:
|
214
|
+
- Sun, 19 Mar 2023 17:42:50 GMT
|
215
|
+
Content-Type:
|
216
|
+
- application/json;charset=UTF-8
|
217
|
+
Transfer-Encoding:
|
218
|
+
- chunked
|
219
|
+
Connection:
|
220
|
+
- close
|
221
|
+
Permissions-Policy:
|
222
|
+
- interest-cohort=(),browsing-topics=()
|
223
|
+
Cf-Cache-Status:
|
224
|
+
- DYNAMIC
|
225
|
+
Report-To:
|
226
|
+
- '{"endpoints":[{"url":"https:\/\/a.nel.cloudflare.com\/report\/v3?s=fgEDNy9k9usQWFSEoSZI%2F8XzaSc1HcsGgD5g0mROQtqioqYewAOHPG5CcTyoG12CDu%2FCeImKTbl0LZE4QJtXHO2MUQxXxahm6voQxWbDOUYCPiQFP3OPGBFLifcA5v1yJk0s2Ek%3D"}],"group":"cf-nel","max_age":604800}'
|
227
|
+
Nel:
|
228
|
+
- '{"success_fraction":0,"report_to":"cf-nel","max_age":604800}'
|
229
|
+
Strict-Transport-Security:
|
230
|
+
- max-age=31536000; includeSubDomains; preload
|
231
|
+
Server:
|
232
|
+
- cloudflare
|
233
|
+
Cf-Ray:
|
234
|
+
- 7aa783a40d210e08-AMS
|
235
|
+
Alt-Svc:
|
236
|
+
- h3=":443"; ma=86400, h3-29=":443"; ma=86400
|
237
|
+
body:
|
238
|
+
encoding: UTF-8
|
239
|
+
string: |-
|
240
|
+
[
|
241
|
+
{
|
242
|
+
"DOI": "10.7554",
|
243
|
+
"RA": "Crossref"
|
244
|
+
}
|
245
|
+
]
|
246
|
+
recorded_at: Sun, 19 Mar 2023 17:42:50 GMT
|
247
|
+
recorded_with: VCR 6.1.0
|
@@ -0,0 +1,149 @@
|
|
1
|
+
---
|
2
|
+
http_interactions:
|
3
|
+
- request:
|
4
|
+
method: get
|
5
|
+
uri: https://api.datacite.org/dois/10.1594/pangaea.721193?include=media,client
|
6
|
+
body:
|
7
|
+
encoding: UTF-8
|
8
|
+
string: ''
|
9
|
+
headers:
|
10
|
+
Connection:
|
11
|
+
- close
|
12
|
+
Host:
|
13
|
+
- api.datacite.org
|
14
|
+
User-Agent:
|
15
|
+
- http.rb/5.1.1
|
16
|
+
response:
|
17
|
+
status:
|
18
|
+
code: 200
|
19
|
+
message: OK
|
20
|
+
headers:
|
21
|
+
Date:
|
22
|
+
- Sun, 19 Mar 2023 17:42:48 GMT
|
23
|
+
Content-Type:
|
24
|
+
- application/json; charset=utf-8
|
25
|
+
Transfer-Encoding:
|
26
|
+
- chunked
|
27
|
+
Connection:
|
28
|
+
- close
|
29
|
+
Status:
|
30
|
+
- 200 OK
|
31
|
+
X-Anonymous-Consumer:
|
32
|
+
- 'true'
|
33
|
+
Cache-Control:
|
34
|
+
- max-age=0, private, must-revalidate
|
35
|
+
Vary:
|
36
|
+
- Accept-Encoding
|
37
|
+
Referrer-Policy:
|
38
|
+
- strict-origin-when-cross-origin
|
39
|
+
X-Permitted-Cross-Domain-Policies:
|
40
|
+
- none
|
41
|
+
X-Xss-Protection:
|
42
|
+
- 1; mode=block
|
43
|
+
X-Request-Id:
|
44
|
+
- 11d4be7b-eb35-4b21-a694-171fa69e96e8
|
45
|
+
X-Download-Options:
|
46
|
+
- noopen
|
47
|
+
Etag:
|
48
|
+
- W/"134239acb30f9e7fd37ef6e0a1c45f69"
|
49
|
+
X-Frame-Options:
|
50
|
+
- SAMEORIGIN
|
51
|
+
X-Runtime:
|
52
|
+
- '0.034861'
|
53
|
+
X-Content-Type-Options:
|
54
|
+
- nosniff
|
55
|
+
X-Powered-By:
|
56
|
+
- Phusion Passenger(R) 6.0.17
|
57
|
+
Server:
|
58
|
+
- nginx/1.18.0 + Phusion Passenger(R) 6.0.17
|
59
|
+
Access-Control-Allow-Credentials:
|
60
|
+
- 'true'
|
61
|
+
Access-Control-Allow-Methods:
|
62
|
+
- GET, POST, PUT, PATCH, DELETE, OPTIONS
|
63
|
+
Access-Control-Allow-Headers:
|
64
|
+
- Accept,Access-Control-Allow-Origin,Access-Control-Expose-Headers,Access-Control-Allow-Methods,Access-Control-Allow-Headers,Authorization,Cache-Control,Content-Type,DNT,If-Modified-Since,Keep-Alive,Origin,User-Agent,X-Mx-ReqToken,X-Requested-With
|
65
|
+
Access-Control-Expose-Headers:
|
66
|
+
- Authorization
|
67
|
+
body:
|
68
|
+
encoding: UTF-8
|
69
|
+
string: '{"data":{"id":"10.1594/pangaea.721193","type":"dois","attributes":{"doi":"10.1594/pangaea.721193","prefix":"10.1594","suffix":"pangaea.721193","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"Kurihara,
|
70
|
+
Haruko","givenName":"Haruko","familyName":"Kurihara","affiliation":[],"nameIdentifiers":[]},{"name":"Kato,
|
71
|
+
Shoji","givenName":"Shoji","familyName":"Kato","affiliation":[],"nameIdentifiers":[]},{"name":"Ishimatsu,
|
72
|
+
Atsushi","givenName":"Atsushi","familyName":"Ishimatsu","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"Seawater
|
73
|
+
carbonate chemistry and processes during experiments with Crassostrea gigas,
|
74
|
+
2007"}],"publisher":"PANGAEA","container":{},"publicationYear":2007,"subjects":[{"subject":"Animalia"},{"subject":"Bottles
|
75
|
+
or small containers/Aquaria (<20 L)"},{"subject":"Calcification/Dissolution"},{"subject":"Coast
|
76
|
+
and continental shelf"},{"subject":"Crassostrea gigas"},{"subject":"Development"},{"subject":"Growth/Morphology"},{"subject":"Laboratory
|
77
|
+
experiment"},{"subject":"Mollusca"},{"subject":"North Pacific"},{"subject":"Pelagos"},{"subject":"Single
|
78
|
+
species"},{"subject":"Temperate"},{"subject":"Zooplankton"},{"subject":"Experimental
|
79
|
+
treatment","subjectScheme":"Parameter"},{"subject":"Carbonate system computation
|
80
|
+
flag","subjectScheme":"Parameter"},{"subject":"Temperature, water","subjectScheme":"Parameter"},{"subject":"Salinity","subjectScheme":"Parameter"},{"subject":"pH","subjectScheme":"Parameter"},{"subject":"Alkalinity,
|
81
|
+
total","subjectScheme":"Parameter"},{"subject":"Carbon, inorganic, dissolved","subjectScheme":"Parameter"},{"subject":"Carbon
|
82
|
+
dioxide","subjectScheme":"Parameter"},{"subject":"Bicarbonate ion","subjectScheme":"Parameter"},{"subject":"Carbonate
|
83
|
+
ion","subjectScheme":"Parameter"},{"subject":"Partial pressure of carbon dioxide
|
84
|
+
(water) at sea surface temperature (wet air)","subjectScheme":"Parameter"},{"subject":"Fugacity
|
85
|
+
of carbon dioxide (water) at sea surface temperature (wet air)","subjectScheme":"Parameter"},{"subject":"Aragonite
|
86
|
+
saturation state","subjectScheme":"Parameter"},{"subject":"Calcite saturation
|
87
|
+
state","subjectScheme":"Parameter"},{"subject":"Proportion","subjectScheme":"Parameter"},{"subject":"Crassostrea
|
88
|
+
gigas, larvae length","subjectScheme":"Parameter"},{"subject":"Crassostrea
|
89
|
+
gigas, larvae height","subjectScheme":"Parameter"},{"subject":"Crassostrea
|
90
|
+
gigas, non mineralized","subjectScheme":"Parameter"},{"subject":"Crassostrea
|
91
|
+
gigas, partially mineralized","subjectScheme":"Parameter"},{"subject":"Crassostrea
|
92
|
+
gigas, fully mineralized","subjectScheme":"Parameter"},{"subject":"Experiment","subjectScheme":"Method"},{"subject":"Calculated
|
93
|
+
using seacarb after Nisumaa et al. (2010)","subjectScheme":"Method"},{"subject":"Refractometer
|
94
|
+
(Atago 100-S)","subjectScheme":"Method"},{"subject":"pH meter (Mettler Toledo,
|
95
|
+
USA)","subjectScheme":"Method"},{"subject":"pH meter (PHM290, Radiometer)","subjectScheme":"Method"},{"subject":"Measured","subjectScheme":"Method"},{"subject":"European
|
96
|
+
network of excellence for Ocean Ecosystems Analysis (EUR-OCEANS)","subjectScheme":"Project"},{"subject":"European
|
97
|
+
Project on Ocean Acidification (EPOCA)","subjectScheme":"Project"},{"subject":"Ocean
|
98
|
+
Acidification International Coordination Centre (OA-ICC)","subjectScheme":"Project"}],"contributors":[{"name":"Nisumaa,
|
99
|
+
Anne-Marin","givenName":"Anne-Marin","familyName":"Nisumaa","contributorType":"DataCollector","affiliation":[],"nameIdentifiers":[]}],"dates":[{"date":"2007","dateType":"Issued"}],"language":"en","types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Supplementary
|
100
|
+
Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[{"relationType":"IsSupplementTo","relatedIdentifier":"10.3354/ab00009","relatedIdentifierType":"DOI"}],"relatedItems":[],"sizes":["2170
|
101
|
+
data points"],"formats":["text/tab-separated-values"],"version":null,"rightsList":[{"rights":"Creative
|
102
|
+
Commons Attribution 3.0 Unported","rightsUri":"https://creativecommons.org/licenses/by/3.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-3.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"This
|
103
|
+
study demonstrated that the increased partial pressure of CO2 (pCO2) in seawater
|
104
|
+
and the attendant acidification that are projected to occur by the year 2300
|
105
|
+
will severely impact the early development of the oyster Crassostrea gigas.
|
106
|
+
Eggs of the oyster were artificially fertilized and incubated for 48 h in
|
107
|
+
seawater acidified to pH 7.4 by equilibrating it with CO2-enriched air (CO2
|
108
|
+
group), and the larval morphology and degree of shell mineralization were
|
109
|
+
compared with the control treatment (air-equilibrated seawater). Only 5% of
|
110
|
+
the CO2 group developed into normal ''D-shaped'' veliger larvae as compared
|
111
|
+
with 68% in the control group, although no difference was observed between
|
112
|
+
the groups up to the trochophore stage. Thus, during embryogenesis, the calcification
|
113
|
+
process appears to be particularly affected by low pH and/or the low CaCO3
|
114
|
+
saturation state of high-CO2 seawater. Veliger larvae with fully mineralized
|
115
|
+
shells accounted for 30% of the CO2-group larvae, compared with 72% in the
|
116
|
+
control (p < 0.005). Shell mineralization was completely inhibited in 45%
|
117
|
+
of the CO2-group larvae, but only in 16% of the control (p < 0.05). Normal
|
118
|
+
D-shaped veligers of the control group exhibited increased shell length and
|
119
|
+
height between 24 and 48 h after fertilization, while the few D-shaped veligers
|
120
|
+
of the CO2 group showed no shell growth during the same period. Our results
|
121
|
+
suggest that future ocean acidification will have deleterious impacts on the
|
122
|
+
early development of marine benthic calcifying organisms.","descriptionType":"Abstract"},{"description":"In
|
123
|
+
order to allow full comparability with other ocean acidification data sets,
|
124
|
+
the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete
|
125
|
+
and consistent set of carbonate system variables, as described by Nisumaa
|
126
|
+
et al. (2010). In this dataset the original values were archived in addition
|
127
|
+
with the recalculated parameters (see related PI).","descriptionType":"TechnicalInfo"},{"description":"Supplement
|
128
|
+
to: Kurihara, Haruko; Kato, Shoji; Ishimatsu, Atsushi (2007): Effects of increased
|
129
|
+
seawater pCO2 on early development of the oyster Crassostrea gigas. Aquatic
|
130
|
+
Biology, 1(1), 91-98","descriptionType":"Other"}],"geoLocations":[],"fundingReferences":[{"awardUri":"https://cordis.europa.eu/project/id/211384","awardTitle":"European
|
131
|
+
Project on Ocean Acidification","funderName":"Seventh Framework Programme","awardNumber":"211384","funderIdentifier":"https://doi.org/10.13039/100011102","funderIdentifierType":"Crossref
|
132
|
+
Funder ID"},{"awardUri":"https://cordis.europa.eu/project/id/511106","awardTitle":"European
|
133
|
+
network of excellence for Ocean Ecosystems Analysis","funderName":"Sixth Framework
|
134
|
+
Programme","awardNumber":"511106","funderIdentifier":"https://doi.org/10.13039/100011103","funderIdentifierType":"Crossref
|
135
|
+
Funder ID"}],"xml":"<?xml version="1.0" encoding="UTF-8"?>
<resource xmlns="http://datacite.org/schema/kernel-4" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://datacite.org/schema/kernel-4 http://schema.datacite.org/meta/kernel-4.3/metadata.xsd">
  <identifier identifierType="DOI">10.1594/PANGAEA.721193</identifier>
  <creators>
    <creator>
      <creatorName>Kurihara, Haruko</creatorName>
      <givenName>Haruko</givenName>
      <familyName>Kurihara</familyName>
    </creator>
    <creator>
      <creatorName>Kato, Shoji</creatorName>
      <givenName>Shoji</givenName>
      <familyName>Kato</familyName>
    </creator>
    <creator>
      <creatorName>Ishimatsu, Atsushi</creatorName>
      <givenName>Atsushi</givenName>
      <familyName>Ishimatsu</familyName>
    </creator>
  </creators>
  <titles>
    <title>Seawater carbonate chemistry and processes during experiments with Crassostrea gigas, 2007</title>
  </titles>
  <publisher>PANGAEA</publisher>
  <publicationYear>2007</publicationYear>
  <subjects>
    <subject>Animalia</subject>
    <subject>Bottles or small containers/Aquaria (&lt;20 L)</subject>
    <subject>Calcification/Dissolution</subject>
    <subject>Coast and continental shelf</subject>
    <subject>Crassostrea gigas</subject>
    <subject>Development</subject>
    <subject>Growth/Morphology</subject>
    <subject>Laboratory experiment</subject>
    <subject>Mollusca</subject>
    <subject>North Pacific</subject>
    <subject>Pelagos</subject>
    <subject>Single species</subject>
    <subject>Temperate</subject>
    <subject>Zooplankton</subject>
    <subject subjectScheme="Parameter">Experimental treatment</subject>
    <subject subjectScheme="Parameter">Carbonate system computation flag</subject>
    <subject subjectScheme="Parameter">Temperature, water</subject>
    <subject subjectScheme="Parameter">Salinity</subject>
    <subject subjectScheme="Parameter">pH</subject>
    <subject subjectScheme="Parameter">Alkalinity, total</subject>
    <subject subjectScheme="Parameter">Carbon, inorganic, dissolved</subject>
    <subject subjectScheme="Parameter">Carbon dioxide</subject>
    <subject subjectScheme="Parameter">Bicarbonate ion</subject>
    <subject subjectScheme="Parameter">Carbonate ion</subject>
    <subject subjectScheme="Parameter">Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)</subject>
    <subject subjectScheme="Parameter">Fugacity of carbon dioxide (water) at sea surface temperature (wet air)</subject>
    <subject subjectScheme="Parameter">Aragonite saturation state</subject>
    <subject subjectScheme="Parameter">Calcite saturation state</subject>
    <subject subjectScheme="Parameter">Proportion</subject>
    <subject subjectScheme="Parameter">Crassostrea gigas, larvae length</subject>
    <subject subjectScheme="Parameter">Crassostrea gigas, larvae height</subject>
    <subject subjectScheme="Parameter">Crassostrea gigas, non mineralized</subject>
    <subject subjectScheme="Parameter">Crassostrea gigas, partially mineralized</subject>
    <subject subjectScheme="Parameter">Crassostrea gigas, fully mineralized</subject>
    <subject subjectScheme="Method">Experiment</subject>
    <subject subjectScheme="Method">Calculated using seacarb after Nisumaa et al. (2010)</subject>
    <subject subjectScheme="Method">Refractometer (Atago 100-S)</subject>
    <subject subjectScheme="Method">pH meter (Mettler Toledo, USA)</subject>
    <subject subjectScheme="Method">pH meter (PHM290, Radiometer)</subject>
    <subject subjectScheme="Method">Measured</subject>
    <subject subjectScheme="Project">European network of excellence for Ocean Ecosystems Analysis (EUR-OCEANS)</subject>
    <subject subjectScheme="Project">European Project on Ocean Acidification (EPOCA)</subject>
    <subject subjectScheme="Project">Ocean Acidification International Coordination Centre (OA-ICC)</subject>
  </subjects>
  <contributors>
    <contributor contributorType="DataCollector">
      <contributorName>Nisumaa, Anne-Marin</contributorName>
      <givenName>Anne-Marin</givenName>
      <familyName>Nisumaa</familyName>
    </contributor>
  </contributors>
  <language>en</language>
  <resourceType resourceTypeGeneral="Dataset">Supplementary Dataset</resourceType>
  <relatedIdentifiers>
    <relatedIdentifier relationType="IsSupplementTo" relatedIdentifierType="DOI">10.3354/ab00009</relatedIdentifier>
  </relatedIdentifiers>
  <sizes>
    <size>2170 data points</size>
  </sizes>
  <formats>
    <format>text/tab-separated-values</format>
  </formats>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/3.0/" schemeURI="https://spdx.org/licenses/" rightsIdentifierScheme="SPDX" rightsIdentifier="CC-BY-3.0">Creative Commons Attribution 3.0 Unported</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">This study demonstrated that the increased partial pressure of CO2 (pCO2) in seawater and the attendant acidification that are projected to occur by the year 2300 will severely impact the early development of the oyster Crassostrea gigas. Eggs of the oyster were artificially fertilized and incubated for 48 h in seawater acidified to pH 7.4 by equilibrating it with CO2-enriched air (CO2 group), and the larval morphology and degree of shell mineralization were compared with the control treatment (air-equilibrated seawater). Only 5% of the CO2 group developed into normal 'D-shaped' veliger larvae as compared with 68% in the control group, although no difference was observed between the groups up to the trochophore stage. Thus, during embryogenesis, the calcification process appears to be particularly affected by low pH and/or the low CaCO3 saturation state of high-CO2 seawater. Veliger larvae with fully mineralized shells accounted for 30% of the CO2-group larvae, compared with 72% in the control (p &lt; 0.005). Shell mineralization was completely inhibited in 45% of the CO2-group larvae, but only in 16% of the control (p &lt; 0.05). Normal D-shaped veligers of the control group exhibited increased shell length and height between 24 and 48 h after fertilization, while the few D-shaped veligers of the CO2 group showed no shell growth during the same period. Our results suggest that future ocean acidification will have deleterious impacts on the early development of marine benthic calcifying organisms.</description>
    <description descriptionType="TechnicalInfo">In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).</description>
    <description descriptionType="Other">Supplement to: Kurihara, Haruko; Kato, Shoji; Ishimatsu, Atsushi (2007): Effects of increased seawater pCO2 on early development of the oyster Crassostrea gigas. Aquatic Biology, 1(1), 91-98</description>
  </descriptions>
  <fundingReferences>
    <fundingReference>
      <funderName>Seventh Framework Programme</funderName>
      <funderIdentifier funderIdentifierType="Crossref Funder ID">https://doi.org/10.13039/100011102</funderIdentifier>
      <awardNumber awardURI="https://cordis.europa.eu/project/id/211384">211384</awardNumber>
      <awardTitle>European Project on Ocean Acidification</awardTitle>
    </fundingReference>
    <fundingReference>
      <funderName>Sixth Framework Programme</funderName>
      <funderIdentifier funderIdentifierType="Crossref Funder ID">https://doi.org/10.13039/100011103</funderIdentifier>
      <awardNumber awardURI="https://cordis.europa.eu/project/id/511106">511106</awardNumber>
      <awardTitle>European network of excellence for Ocean Ecosystems Analysis</awardTitle>
    </fundingReference>
  </fundingReferences>
</resource>","url":"https://doi.pangaea.de/10.1594/PANGAEA.721193","contentUrl":null,"metadataVersion":34,"schemaVersion":"http://datacite.org/schema/kernel-4","source":"mds","isActive":true,"state":"findable","reason":null,"viewCount":0,"viewsOverTime":[],"downloadCount":0,"downloadsOverTime":[],"referenceCount":0,"citationCount":0,"citationsOverTime":[],"partCount":0,"partOfCount":0,"versionCount":0,"versionOfCount":0,"created":"2011-12-03T14:53:05.000Z","registered":"2009-07-17T01:23:41.000Z","published":"2007","updated":"2023-02-25T10:01:25.000Z"},"relationships":{"client":{"data":{"id":"pangaea.repository","type":"clients"}},"provider":{"data":{"id":"pangaea","type":"providers"}},"media":{"data":{"id":"10.1594/pangaea.721193","type":"media"}},"references":{"data":[]},"citations":{"data":[]},"parts":{"data":[]},"partOf":{"data":[]},"versions":{"data":[]},"versionOf":{"data":[]}}},"included":[{"id":"pangaea.repository","type":"clients","attributes":{"name":"PANGAEA","symbol":"PANGAEA.REPOSITORY","year":2020,"alternateName":"Data
|
136
|
+
Publisher for Earth and Environmental Science","description":"PANGAEA is a
|
137
|
+
data publisher for earth and environmental sciences. PANGAEA currently keeps
|
138
|
+
billions of data items comprised in hundred of thousands trans-disciplinary
|
139
|
+
data sets from all over the world. Since more than 25 years, PANGAEA is one
|
140
|
+
of the leading data centers for data curation, long-term data archiving and
|
141
|
+
publication. In contrast to generic data repositories, data curation at PANGAEA
|
142
|
+
includes editing of deposited data for accuracy by well-trained data editors
|
143
|
+
from the geological and biological domains. Since more than 10 years PANGAEA
|
144
|
+
assigns Digital Object Identifiers (DOI) to datasets. The PANGAEA team support
|
145
|
+
the further development of services for cross-linking data and paper publications
|
146
|
+
as well as evaluating the FAIR-ness of repositories according to the FAIR
|
147
|
+
principles.","language":["en"],"clientType":"repository","domains":"pangaea.de,doi.pangaea.de","re3data":"https://doi.org/10.17616/R3XS37","opendoar":null,"issn":{},"url":"https://www.pangaea.de/","created":"2020-03-11T13:58:41.000Z","updated":"2023-03-09T17:50:18.000Z","isActive":true},"relationships":{"provider":{"data":{"id":"pangaea","type":"providers"}},"prefixes":{"data":[{"id":"10.1594","type":"prefixes"},{"id":"10.25594","type":"prefixes"}]}}}]}'
|
148
|
+
recorded_at: Sun, 19 Mar 2023 17:42:48 GMT
|
149
|
+
recorded_with: VCR 6.1.0
|
@@ -0,0 +1,86 @@
|
|
1
|
+
---
|
2
|
+
http_interactions:
|
3
|
+
- request:
|
4
|
+
method: get
|
5
|
+
uri: https://raw.githubusercontent.com/datacite/maremma/master/codemeta.json
|
6
|
+
body:
|
7
|
+
encoding: UTF-8
|
8
|
+
string: ''
|
9
|
+
headers:
|
10
|
+
Connection:
|
11
|
+
- close
|
12
|
+
Host:
|
13
|
+
- raw.githubusercontent.com
|
14
|
+
User-Agent:
|
15
|
+
- http.rb/5.1.1
|
16
|
+
response:
|
17
|
+
status:
|
18
|
+
code: 200
|
19
|
+
message: OK
|
20
|
+
headers:
|
21
|
+
Connection:
|
22
|
+
- close
|
23
|
+
Content-Length:
|
24
|
+
- '1260'
|
25
|
+
Cache-Control:
|
26
|
+
- max-age=300
|
27
|
+
Content-Security-Policy:
|
28
|
+
- default-src 'none'; style-src 'unsafe-inline'; sandbox
|
29
|
+
Content-Type:
|
30
|
+
- text/plain; charset=utf-8
|
31
|
+
Etag:
|
32
|
+
- '"5aa1e469c2faf6b74bf977ce0b38ce8c12fef50564b1d9a3588b2cf0197a3057"'
|
33
|
+
Strict-Transport-Security:
|
34
|
+
- max-age=31536000
|
35
|
+
X-Content-Type-Options:
|
36
|
+
- nosniff
|
37
|
+
X-Frame-Options:
|
38
|
+
- deny
|
39
|
+
X-Xss-Protection:
|
40
|
+
- 1; mode=block
|
41
|
+
X-Github-Request-Id:
|
42
|
+
- 8920:0D8D:1B9F643:1CDD42E:64174797
|
43
|
+
Accept-Ranges:
|
44
|
+
- bytes
|
45
|
+
Date:
|
46
|
+
- Sun, 19 Mar 2023 17:42:49 GMT
|
47
|
+
Via:
|
48
|
+
- 1.1 varnish
|
49
|
+
X-Served-By:
|
50
|
+
- cache-ams21054-AMS
|
51
|
+
X-Cache:
|
52
|
+
- HIT
|
53
|
+
X-Cache-Hits:
|
54
|
+
- '1'
|
55
|
+
X-Timer:
|
56
|
+
- S1679247769.023531,VS0,VE1
|
57
|
+
Vary:
|
58
|
+
- Authorization,Accept-Encoding,Origin
|
59
|
+
Access-Control-Allow-Origin:
|
60
|
+
- "*"
|
61
|
+
X-Fastly-Request-Id:
|
62
|
+
- 5e6e5f1b25f65917bd03997bcccc3297979e97bd
|
63
|
+
Expires:
|
64
|
+
- Sun, 19 Mar 2023 17:47:49 GMT
|
65
|
+
Source-Age:
|
66
|
+
- '4'
|
67
|
+
body:
|
68
|
+
encoding: UTF-8
|
69
|
+
string: "{\n\t\"@context\": \"https://raw.githubusercontent.com/codemeta/codemeta/master/codemeta.jsonld\",\n\t\"@type\":
|
70
|
+
\"SoftwareSourceCode\",\n\t\"@id\": \"https://doi.org/10.5438/QEG0-3GM3\",\n\t\"agents\":
|
71
|
+
{\n\t\t\"@id\": \"http://orcid.org/0000-0003-0077-4738\",\n\t\t\"@type\":
|
72
|
+
\"person\",\n\t\t\"name\": \"Martin Fenner\",\n\t\t\"affiliation\": \"DataCite\",\n\t\t\"mustBeCited\":
|
73
|
+
true,\n\t\t\"isMaintainer\": true,\n\t\t\"isRightsHolder\": true\n\t},\n\t\"identifier\":
|
74
|
+
\"https://doi.org/10.5438/QEG0-3GM3\",\n\t\"codeRepository\": \"https://github.com/datacite/maremma\",\n\t\"controlledTem\":
|
75
|
+
\"software\",\n\t\"dateCreated\": \"2015-11-28\",\n\t\"datePublished\": \"2017-02-24\",\n\t\"dateModified\":
|
76
|
+
\"2017-02-24\",\n\t\"description\": \"Ruby utility library for network requests.
|
77
|
+
Based on Faraday and Excon, provides a wrapper for XML/JSON parsing and error
|
78
|
+
handling. All successful responses are returned as hash with key data, all
|
79
|
+
errors in a JSONAPI-friendly hash with key errors.\",\n\t\"isAutomatedBuild\":
|
80
|
+
true,\n\t\"licenseId\": \"MIT\",\n\t\"publisher\": \"DataCite\",\n\t\"tags\":
|
81
|
+
[\n\t\t\"faraday\",\n\t\t\"excon\",\n\t\t\"net/http\"\n\t],\n\t\"title\":
|
82
|
+
\"Maremma: a Ruby library for simplified network calls\",\n\t\"programmingLanguage\":
|
83
|
+
{\n\t\t\"name\": \"Ruby\",\n\t\t\"version\": \"≥ 2.3.3\",\n\t\t\"URL\": \"https://www.ruby-lang.org\"\n\t},\n\t\"readme\":
|
84
|
+
\"https://github.com/datacite/maremma/blob/master/README.md\"\n}\n"
|
85
|
+
recorded_at: Sun, 19 Mar 2023 17:42:48 GMT
|
86
|
+
recorded_with: VCR 6.1.0
|