commonmeta-ruby 3.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (791) hide show
  1. checksums.yaml +7 -0
  2. data/.github/workflows/build.yml +38 -0
  3. data/.github/workflows/changelog.yml +36 -0
  4. data/.github/workflows/codeql-analysis.yml +72 -0
  5. data/.github/workflows/rubocop.yml +50 -0
  6. data/.gitignore +59 -0
  7. data/.rubocop.yml +182 -0
  8. data/.rubocop_todo.yml +76 -0
  9. data/.tool-versions +1 -0
  10. data/CHANGELOG.md +124 -0
  11. data/CITATION +16 -0
  12. data/CITATION.cff +20 -0
  13. data/Gemfile +5 -0
  14. data/Gemfile.lock +270 -0
  15. data/LICENSE.md +21 -0
  16. data/README.md +733 -0
  17. data/Rakefile +13 -0
  18. data/bin/commonmeta +9 -0
  19. data/commonmeta.gemspec +68 -0
  20. data/lib/commonmeta/array.rb +13 -0
  21. data/lib/commonmeta/author_utils.rb +172 -0
  22. data/lib/commonmeta/cli.rb +70 -0
  23. data/lib/commonmeta/crossref_utils.rb +343 -0
  24. data/lib/commonmeta/doi_utils.rb +81 -0
  25. data/lib/commonmeta/metadata.rb +269 -0
  26. data/lib/commonmeta/metadata_utils.rb +184 -0
  27. data/lib/commonmeta/pubmed.rb +36 -0
  28. data/lib/commonmeta/readers/bibtex_reader.rb +62 -0
  29. data/lib/commonmeta/readers/cff_reader.rb +146 -0
  30. data/lib/commonmeta/readers/codemeta_reader.rb +90 -0
  31. data/lib/commonmeta/readers/crossref_reader.rb +186 -0
  32. data/lib/commonmeta/readers/crossref_xml_reader.rb +379 -0
  33. data/lib/commonmeta/readers/csl_reader.rb +85 -0
  34. data/lib/commonmeta/readers/datacite_reader.rb +169 -0
  35. data/lib/commonmeta/readers/npm_reader.rb +94 -0
  36. data/lib/commonmeta/readers/ris_reader.rb +66 -0
  37. data/lib/commonmeta/readers/schema_org_reader.rb +300 -0
  38. data/lib/commonmeta/schema_utils.rb +19 -0
  39. data/lib/commonmeta/string.rb +7 -0
  40. data/lib/commonmeta/utils.rb +1351 -0
  41. data/lib/commonmeta/version.rb +5 -0
  42. data/lib/commonmeta/whitelist_scrubber.rb +54 -0
  43. data/lib/commonmeta/writers/bibtex_writer.rb +36 -0
  44. data/lib/commonmeta/writers/cff_writer.rb +63 -0
  45. data/lib/commonmeta/writers/citation_writer.rb +14 -0
  46. data/lib/commonmeta/writers/codemeta_writer.rb +33 -0
  47. data/lib/commonmeta/writers/crossref_xml_writer.rb +11 -0
  48. data/lib/commonmeta/writers/csl_writer.rb +11 -0
  49. data/lib/commonmeta/writers/csv_writer.rb +26 -0
  50. data/lib/commonmeta/writers/datacite_writer.rb +94 -0
  51. data/lib/commonmeta/writers/jats_writer.rb +138 -0
  52. data/lib/commonmeta/writers/rdf_xml_writer.rb +11 -0
  53. data/lib/commonmeta/writers/ris_writer.rb +41 -0
  54. data/lib/commonmeta/writers/schema_org_writer.rb +61 -0
  55. data/lib/commonmeta/writers/turtle_writer.rb +11 -0
  56. data/lib/commonmeta/xml_converter.rb +14 -0
  57. data/lib/commonmeta.rb +35 -0
  58. data/resources/2008/09/xsd.xsl +997 -0
  59. data/resources/cff.json +1827 -0
  60. data/resources/commonmeta_v0.9.json +393 -0
  61. data/resources/crossref/AccessIndicators.xsd +47 -0
  62. data/resources/crossref/JATS-journalpublishing1-3d2-mathml3-elements.xsd +10130 -0
  63. data/resources/crossref/JATS-journalpublishing1-3d2-mathml3.xsd +48 -0
  64. data/resources/crossref/JATS-journalpublishing1-elements.xsd +8705 -0
  65. data/resources/crossref/JATS-journalpublishing1-mathml3-elements.xsd +8608 -0
  66. data/resources/crossref/JATS-journalpublishing1-mathml3.xsd +49 -0
  67. data/resources/crossref/JATS-journalpublishing1.xsd +6176 -0
  68. data/resources/crossref/clinicaltrials.xsd +61 -0
  69. data/resources/crossref/common5.3.1.xsd +1530 -0
  70. data/resources/crossref/crossref5.3.1.xsd +1949 -0
  71. data/resources/crossref/crossref_query_output3.0.xsd +1097 -0
  72. data/resources/crossref/fundref.xsd +49 -0
  73. data/resources/crossref/module-ali.xsd +39 -0
  74. data/resources/crossref/relations.xsd +444 -0
  75. data/resources/datacite-contributorType-v4.xsd +35 -0
  76. data/resources/datacite-dateType-v4.xsd +25 -0
  77. data/resources/datacite-descriptionType-v4.xsd +19 -0
  78. data/resources/datacite-funderIdentifierType-v4.xsd +15 -0
  79. data/resources/datacite-nameType-v4.xsd +10 -0
  80. data/resources/datacite-relatedIdentifierType-v4.xsd +34 -0
  81. data/resources/datacite-relationType-v4.xsd +49 -0
  82. data/resources/datacite-resourceType-v4.xsd +28 -0
  83. data/resources/datacite-titleType-v4.xsd +14 -0
  84. data/resources/datacite-v3.json +508 -0
  85. data/resources/datacite-v4.json +512 -0
  86. data/resources/kernel-3.0/include/datacite-contributorType-v3.xsd +33 -0
  87. data/resources/kernel-3.0/include/datacite-dateType-v3.xsd +21 -0
  88. data/resources/kernel-3.0/include/datacite-descriptionType-v3.xsd +17 -0
  89. data/resources/kernel-3.0/include/datacite-relatedIdentifierType-v3.xsd +27 -0
  90. data/resources/kernel-3.0/include/datacite-relationType-v3.xsd +33 -0
  91. data/resources/kernel-3.0/include/datacite-resourceType-v3.xsd +26 -0
  92. data/resources/kernel-3.0/include/datacite-titleType-v3.xsd +12 -0
  93. data/resources/kernel-3.0/include/xml.xsd +286 -0
  94. data/resources/kernel-3.0/metadata.xsd +377 -0
  95. data/resources/kernel-4/include/datacite-contributorType-v4.xsd +35 -0
  96. data/resources/kernel-4/include/datacite-dateType-v4.xsd +25 -0
  97. data/resources/kernel-4/include/datacite-descriptionType-v4.xsd +19 -0
  98. data/resources/kernel-4/include/datacite-funderIdentifierType-v4.xsd +16 -0
  99. data/resources/kernel-4/include/datacite-nameType-v4.xsd +10 -0
  100. data/resources/kernel-4/include/datacite-numberType-v4.xsd +12 -0
  101. data/resources/kernel-4/include/datacite-relatedIdentifierType-v4.xsd +34 -0
  102. data/resources/kernel-4/include/datacite-relationType-v4.xsd +51 -0
  103. data/resources/kernel-4/include/datacite-resourceType-v4.xsd +43 -0
  104. data/resources/kernel-4/include/datacite-titleType-v4.xsd +14 -0
  105. data/resources/kernel-4/include/xml.xsd +286 -0
  106. data/resources/kernel-4/metadata.xsd +707 -0
  107. data/resources/oecd/dfg-mappings.json +1866 -0
  108. data/resources/oecd/for-mappings.json +1099 -0
  109. data/resources/oecd/fos-mappings.json +198 -0
  110. data/resources/schema_org/jsonldcontext.json +7477 -0
  111. data/resources/spdx/licenses.json +5297 -0
  112. data/resources/xml.xsd +286 -0
  113. data/rubocop.sarif +0 -0
  114. data/sonar-project.properties +11 -0
  115. data/spec/array_spec.rb +22 -0
  116. data/spec/author_utils_spec.rb +132 -0
  117. data/spec/cli_spec.rb +309 -0
  118. data/spec/doi_utils_spec.rb +318 -0
  119. data/spec/find_from_format_spec.rb +144 -0
  120. data/spec/fixtures/CITATION.cff +83 -0
  121. data/spec/fixtures/aida.json +82 -0
  122. data/spec/fixtures/cgimp_package.json +18 -0
  123. data/spec/fixtures/cit_package.json +19 -0
  124. data/spec/fixtures/citeproc-no-author.json +26 -0
  125. data/spec/fixtures/citeproc-no-categories.json +21 -0
  126. data/spec/fixtures/citeproc.json +30 -0
  127. data/spec/fixtures/codemeta.json +86 -0
  128. data/spec/fixtures/codemeta_v2.json +86 -0
  129. data/spec/fixtures/crosscite.json +63 -0
  130. data/spec/fixtures/crossref.bib +14 -0
  131. data/spec/fixtures/crossref.json +572 -0
  132. data/spec/fixtures/crossref.ris +15 -0
  133. data/spec/fixtures/crossref.xml +606 -0
  134. data/spec/fixtures/datacite.json +86 -0
  135. data/spec/fixtures/datacite_software.json +21 -0
  136. data/spec/fixtures/datacite_software_missing_comma.json +18 -0
  137. data/spec/fixtures/datacite_software_overlapping_keys.json +18 -0
  138. data/spec/fixtures/datacite_software_version.json +74 -0
  139. data/spec/fixtures/edam_package.json +12 -0
  140. data/spec/fixtures/maremma/codemeta.json +36 -0
  141. data/spec/fixtures/pure.bib +14 -0
  142. data/spec/fixtures/pure.ris +15 -0
  143. data/spec/fixtures/pure.xml +188 -0
  144. data/spec/fixtures/ris_bug.ris +9 -0
  145. data/spec/fixtures/schema_4.0.xml +140 -0
  146. data/spec/fixtures/schema_org.json +49 -0
  147. data/spec/fixtures/schema_org_front-matter.json +32 -0
  148. data/spec/fixtures/schema_org_geolocation.json +82 -0
  149. data/spec/fixtures/schema_org_geoshape.json +550 -0
  150. data/spec/fixtures/schema_org_gtex.json +75 -0
  151. data/spec/fixtures/schema_org_list.json +12623 -0
  152. data/spec/fixtures/schema_org_tdl_iodp_invalid_authors.json +25 -0
  153. data/spec/fixtures/schema_org_topmed.json +53 -0
  154. data/spec/fixtures/schema_org_type_as_array.json +41 -0
  155. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref/default.yml +110 -0
  156. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref/to_bibtex.yml +110 -0
  157. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref/to_crossref_xml.yml +110 -0
  158. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref/to_datacite.yml +110 -0
  159. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref/to_schema_org.yml +110 -0
  160. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref_xml/default.yml +55 -0
  161. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref_xml/to_bibtex.yml +55 -0
  162. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref_xml/to_crossref_xml.yml +55 -0
  163. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref_xml/to_datacite.yml +55 -0
  164. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_file/crossref_xml/to_schema_org.yml +55 -0
  165. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/default.yml +299 -0
  166. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_bibtex.yml +299 -0
  167. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_citation.yml +299 -0
  168. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_crossref_xml.yml +299 -0
  169. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_datacite.yml +299 -0
  170. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_jats.yml +299 -0
  171. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/crossref/to_schema_org.yml +299 -0
  172. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/default.yml +172 -0
  173. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/to_bibtex.yml +172 -0
  174. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/to_citation.yml +172 -0
  175. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/to_datacite.yml +172 -0
  176. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/to_jats.yml +172 -0
  177. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/datacite/to_schema_org.yml +172 -0
  178. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/schema_org/default.yml +1098 -0
  179. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/schema_org/to_datacite.yml +1098 -0
  180. data/spec/fixtures/vcr_cassettes/Briard_CLI/convert_from_id/schema_org/to_schema_org.yml +1100 -0
  181. data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/crossref.yml +55 -0
  182. data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/datacite.yml +55 -0
  183. data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/jalc.yml +55 -0
  184. data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/kisti.yml +55 -0
  185. data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/medra.yml +55 -0
  186. data/spec/fixtures/vcr_cassettes/Briard_CLI/find_from_format_by_id/op.yml +55 -0
  187. data/spec/fixtures/vcr_cassettes/Briard_Metadata/authors_as_string/author.yml +164 -0
  188. data/spec/fixtures/vcr_cassettes/Briard_Metadata/authors_as_string/no_author.yml +164 -0
  189. data/spec/fixtures/vcr_cassettes/Briard_Metadata/authors_as_string/single_author.yml +164 -0
  190. data/spec/fixtures/vcr_cassettes/Briard_Metadata/authors_as_string/with_organization.yml +164 -0
  191. data/spec/fixtures/vcr_cassettes/Briard_Metadata/change_metadata_as_datacite_xml/with_data_citation.yml +247 -0
  192. data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/crossref.yml +55 -0
  193. data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/datacite.yml +55 -0
  194. data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/jalc.yml +55 -0
  195. data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/kisti.yml +55 -0
  196. data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/medra.yml +55 -0
  197. data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/not_found.yml +55 -0
  198. data/spec/fixtures/vcr_cassettes/Briard_Metadata/doi_registration_agency/op.yml +55 -0
  199. data/spec/fixtures/vcr_cassettes/Briard_Metadata/find_from_format_by_ID/crossref.yml +55 -0
  200. data/spec/fixtures/vcr_cassettes/Briard_Metadata/find_from_format_by_ID/crossref_doi_not_url.yml +55 -0
  201. data/spec/fixtures/vcr_cassettes/Briard_Metadata/find_from_format_by_ID/datacite.yml +55 -0
  202. data/spec/fixtures/vcr_cassettes/Briard_Metadata/find_from_format_by_ID/datacite_doi_http.yml +55 -0
  203. data/spec/fixtures/vcr_cassettes/Briard_Metadata/find_from_format_by_ID/unknown_DOI_registration_agency.yml +55 -0
  204. data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/hsh_to_fos_for_match.yml +221 -0
  205. data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/hsh_to_fos_for_with_schemeUri_in_hash.yml +221 -0
  206. data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/hsh_to_fos_match.yml +221 -0
  207. data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/hsh_to_fos_no_match.yml +221 -0
  208. data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/name_to_fos_for_match.yml +221 -0
  209. data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/name_to_fos_match.yml +221 -0
  210. data/spec/fixtures/vcr_cassettes/Briard_Metadata/fos/name_to_fos_no_match.yml +221 -0
  211. data/spec/fixtures/vcr_cassettes/Briard_Metadata/from_schema_org/with_id.yml +221 -0
  212. data/spec/fixtures/vcr_cassettes/Briard_Metadata/from_schema_org_creators/with_affiliation.yml +221 -0
  213. data/spec/fixtures/vcr_cassettes/Briard_Metadata/from_schema_org_creators/without_affiliation.yml +221 -0
  214. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_cff_metadata/cff-converter-python.yml +200 -0
  215. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_cff_metadata/ruby-cff.yml +154 -0
  216. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_cff_metadata/ruby-cff_repository_url.yml +154 -0
  217. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_codemeta_metadata/maremma.yml +86 -0
  218. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_codemeta_metadata/metadata_reports.yml +93 -0
  219. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/DOI_with_ORCID_ID.yml +337 -0
  220. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/DOI_with_SICI_DOI.yml +347 -0
  221. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/DOI_with_data_citation.yml +359 -0
  222. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/JaLC.yml +384 -0
  223. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/KISTI.yml +330 -0
  224. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/OP.yml +969 -0
  225. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/affiliation_is_space.yml +358 -0
  226. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/another_book.yml +312 -0
  227. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/another_book_chapter.yml +465 -0
  228. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/article_id_as_page_number.yml +276 -0
  229. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/author_literal.yml +492 -0
  230. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/book.yml +523 -0
  231. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/book_chapter.yml +377 -0
  232. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/book_chapter_with_RDF_for_container.yml +336 -0
  233. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/book_oup.yml +289 -0
  234. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/component.yml +289 -0
  235. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/dataset.yml +299 -0
  236. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/dataset_usda.yml +341 -0
  237. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/date_in_future.yml +570 -0
  238. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/dissertation.yml +301 -0
  239. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/empty_given_name.yml +303 -0
  240. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/invalid_date.yml +307 -0
  241. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_article.yml +461 -0
  242. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_article_original_language_title.yml +276 -0
  243. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_article_with.yml +470 -0
  244. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_article_with_RDF_for_container.yml +519 -0
  245. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_article_with_funding.yml +456 -0
  246. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/journal_issue.yml +270 -0
  247. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/mEDRA.yml +310 -0
  248. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/markup.yml +329 -0
  249. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/missing_creator.yml +307 -0
  250. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/multiple_issn.yml +393 -0
  251. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/multiple_titles.yml +265 -0
  252. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/multiple_titles_with_missing.yml +860 -0
  253. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/not_found_error.yml +209 -0
  254. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/peer_review.yml +287 -0
  255. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/posted_content.yml +326 -0
  256. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/posted_content_copernicus.yml +297 -0
  257. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/report_osti.yml +315 -0
  258. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/vor_with_url.yml +451 -0
  259. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/yet_another_book.yml +816 -0
  260. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_metadata/yet_another_book_chapter.yml +324 -0
  261. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_crossref_raw/journal_article.yml +110 -0
  262. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datacite_metadata/dissertation.yml +152 -0
  263. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datacite_metadata/funding_references.yml +175 -0
  264. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datacite_metadata/subject_scheme.yml +328 -0
  265. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date/publication_date.yml +221 -0
  266. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_date_parts/date.yml +221 -0
  267. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_date_parts/year-month.yml +221 -0
  268. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_date_parts/year.yml +221 -0
  269. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_parts/date.yml +221 -0
  270. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_parts/year-month.yml +221 -0
  271. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_from_parts/year.yml +221 -0
  272. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_parts/date.yml +221 -0
  273. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_parts/year-month.yml +221 -0
  274. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_date_parts/year.yml +221 -0
  275. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datetime_from_time/future.yml +221 -0
  276. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datetime_from_time/invalid.yml +221 -0
  277. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datetime_from_time/nil.yml +221 -0
  278. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datetime_from_time/past.yml +221 -0
  279. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_datetime_from_time/present.yml +221 -0
  280. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_one_author/has_familyName.yml +133 -0
  281. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_one_author/has_name_in_display-order_with_ORCID.yml +153 -0
  282. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_one_author/is_organization.yml +164 -0
  283. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_one_author/name_with_affiliation_crossref.yml +247 -0
  284. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_one_author/only_familyName_and_givenName.yml +468 -0
  285. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/BlogPosting.yml +530 -0
  286. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/BlogPosting_with_new_DOI.yml +530 -0
  287. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/get_schema_org_metadata_front_matter/BlogPosting.yml +534 -0
  288. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/harvard_dataverse.yml +1838 -0
  289. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/pangaea.yml +468 -0
  290. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/upstream_blog.yml +885 -0
  291. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_schema_org_metadata/zenodo.yml +583 -0
  292. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_series_information/only_title.yml +221 -0
  293. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_series_information/title_and_pages.yml +221 -0
  294. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_series_information/title_volume_and_pages.yml +221 -0
  295. data/spec/fixtures/vcr_cassettes/Briard_Metadata/get_series_information/title_volume_issue_and_pages.yml +221 -0
  296. data/spec/fixtures/vcr_cassettes/Briard_Metadata/github/github_as_cff_url.yml +221 -0
  297. data/spec/fixtures/vcr_cassettes/Briard_Metadata/github/github_as_codemeta_url.yml +221 -0
  298. data/spec/fixtures/vcr_cassettes/Briard_Metadata/github/github_from_url.yml +221 -0
  299. data/spec/fixtures/vcr_cassettes/Briard_Metadata/github/github_from_url_cff_file.yml +221 -0
  300. data/spec/fixtures/vcr_cassettes/Briard_Metadata/github/github_from_url_file.yml +221 -0
  301. data/spec/fixtures/vcr_cassettes/Briard_Metadata/handle_input/DOI_RA_not_Crossref_or_DataCite.yml +55 -0
  302. data/spec/fixtures/vcr_cassettes/Briard_Metadata/handle_input/unknown_DOI_prefix.yml +55 -0
  303. data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_comma.yml +164 -0
  304. data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_family_name.yml +164 -0
  305. data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_id.yml +164 -0
  306. data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_known_given_name.yml +164 -0
  307. data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_no_info.yml +164 -0
  308. data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_orcid_id.yml +164 -0
  309. data/spec/fixtures/vcr_cassettes/Briard_Metadata/is_personal_name_/has_type_organization.yml +164 -0
  310. data/spec/fixtures/vcr_cassettes/Briard_Metadata/json_schema_errors/is_valid.yml +221 -0
  311. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_cc_url/not_found.yml +221 -0
  312. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_cc_url/with_trailing_slash.yml +221 -0
  313. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_cc_url/with_trailing_slash_and_to_https.yml +221 -0
  314. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/doi.yml +221 -0
  315. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/doi_as_url.yml +221 -0
  316. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/filename.yml +221 -0
  317. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/ftp.yml +221 -0
  318. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/invalid_url.yml +221 -0
  319. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/sandbox_via_options.yml +221 -0
  320. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/sandbox_via_url.yml +221 -0
  321. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/string.yml +221 -0
  322. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/url.yml +221 -0
  323. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_id/url_with_utf-8.yml +221 -0
  324. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_ids/doi.yml +221 -0
  325. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_ids/url.yml +221 -0
  326. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_issn/from_array.yml +221 -0
  327. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_issn/from_empty_array.yml +221 -0
  328. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_issn/from_hash.yml +221 -0
  329. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_issn/from_string.yml +221 -0
  330. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_url/uri.yml +221 -0
  331. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_url/with_trailing_slash.yml +221 -0
  332. data/spec/fixtures/vcr_cassettes/Briard_Metadata/normalize_url/with_trailing_slash_and_to_https.yml +221 -0
  333. data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/array.yml +221 -0
  334. data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/array_of_strings.yml +221 -0
  335. data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/first.yml +221 -0
  336. data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/hash.yml +221 -0
  337. data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/hash_with_array_value.yml +221 -0
  338. data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/nil.yml +221 -0
  339. data/spec/fixtures/vcr_cassettes/Briard_Metadata/parse_attributes/string.yml +221 -0
  340. data/spec/fixtures/vcr_cassettes/Briard_Metadata/random_doi/decode_anothe_doi.yml +221 -0
  341. data/spec/fixtures/vcr_cassettes/Briard_Metadata/random_doi/decode_doi.yml +221 -0
  342. data/spec/fixtures/vcr_cassettes/Briard_Metadata/random_doi/encode_doi.yml +221 -0
  343. data/spec/fixtures/vcr_cassettes/Briard_Metadata/sanitize/onlies_keep_specific_tags.yml +221 -0
  344. data/spec/fixtures/vcr_cassettes/Briard_Metadata/sanitize/removes_a_tags.yml +221 -0
  345. data/spec/fixtures/vcr_cassettes/Briard_Metadata/spdx/hsh_to_spdx_id.yml +221 -0
  346. data/spec/fixtures/vcr_cassettes/Briard_Metadata/spdx/hsh_to_spdx_not_found.yml +221 -0
  347. data/spec/fixtures/vcr_cassettes/Briard_Metadata/spdx/hsh_to_spdx_url.yml +221 -0
  348. data/spec/fixtures/vcr_cassettes/Briard_Metadata/spdx/name_to_spdx_exists.yml +221 -0
  349. data/spec/fixtures/vcr_cassettes/Briard_Metadata/spdx/name_to_spdx_id.yml +221 -0
  350. data/spec/fixtures/vcr_cassettes/Briard_Metadata/to_schema_org/with_id.yml +221 -0
  351. data/spec/fixtures/vcr_cassettes/Briard_Metadata/to_schema_org_identifiers/with_identifiers.yml +221 -0
  352. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid.yml +221 -0
  353. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_https.yml +221 -0
  354. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_id.yml +221 -0
  355. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_sandbox.yml +221 -0
  356. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_sandbox_https.yml +221 -0
  357. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_with_spaces.yml +221 -0
  358. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_wrong_id.yml +221 -0
  359. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid/validate_orcid_www.yml +221 -0
  360. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid_scheme/validate_orcid_scheme.yml +221 -0
  361. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid_scheme/validate_orcid_scheme_https.yml +221 -0
  362. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid_scheme/validate_orcid_scheme_trailing_slash.yml +221 -0
  363. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_orcid_scheme/validate_orcid_scheme_www.yml +221 -0
  364. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_url/DOI.yml +221 -0
  365. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_url/ISSN.yml +221 -0
  366. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_url/URL.yml +221 -0
  367. data/spec/fixtures/vcr_cassettes/Briard_Metadata/validate_url/string.yml +221 -0
  368. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/BlogPosting.yml +81 -0
  369. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/Dataset.yml +120 -0
  370. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/authors_with_affiliations.yml +186 -0
  371. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/climate_data.yml +74 -0
  372. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/from_schema_org.yml +530 -0
  373. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/keywords_subject_scheme.yml +149 -0
  374. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/maremma.yml +86 -0
  375. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/text.yml +100 -0
  376. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/with_data_citation.yml +247 -0
  377. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_bibtex/with_pages.yml +228 -0
  378. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_cff/Collection_of_Jupyter_notebooks.yml +143 -0
  379. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_cff/SoftwareSourceCode_Zenodo.yml +150 -0
  380. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_cff/SoftwareSourceCode_also_Zenodo.yml +93 -0
  381. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_cff/ruby-cff.yml +154 -0
  382. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/Dataset.yml +120 -0
  383. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/Journal_article.yml +247 -0
  384. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/Journal_article_vancouver_style.yml +299 -0
  385. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/Missing_author.yml +199 -0
  386. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/interactive_resource_without_dates.yml +75 -0
  387. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_citation/software_w/version.yml +86 -0
  388. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite.yml +76 -0
  389. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite_check_codemeta_v2.yml +76 -0
  390. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/another_schema_org_from_front-matter.yml +541 -0
  391. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/journal_article.yml +55 -0
  392. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/journal_article_from_datacite.yml +85 -0
  393. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/posted_content.yml +283 -0
  394. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/schema_org_from_another_science_blog.yml +123 -0
  395. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/schema_org_from_front_matter.yml +477 -0
  396. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_crossref/schema_org_from_upstream_blog.yml +1025 -0
  397. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/Another_dataset.yml +110 -0
  398. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/BlogPosting.yml +81 -0
  399. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/BlogPosting_schema_org.yml +530 -0
  400. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/Dataset.yml +120 -0
  401. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/container_title.yml +153 -0
  402. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/interactive_resource_without_dates.yml +75 -0
  403. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/journal_article.yml +247 -0
  404. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/keywords_subject_scheme.yml +149 -0
  405. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/maremma.yml +86 -0
  406. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/missing_creator.yml +199 -0
  407. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/multiple_abstracts.yml +101 -0
  408. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/organization_author.yml +314 -0
  409. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/software.yml +90 -0
  410. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/software_w/version.yml +86 -0
  411. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/with_only_first_page.yml +333 -0
  412. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csl/with_pages.yml +228 -0
  413. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csv/climate_data.yml +74 -0
  414. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csv/maremma.yml +86 -0
  415. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csv/text.yml +100 -0
  416. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csv/with_data_citation.yml +247 -0
  417. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_csv/with_pages.yml +228 -0
  418. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite/from_schema_org.yml +530 -0
  419. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite/maremma.yml +86 -0
  420. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite/with_ORCID_ID.yml +228 -0
  421. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite/with_data_citation.yml +247 -0
  422. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite_json/from_schema_org.yml +530 -0
  423. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite_json/maremma.yml +86 -0
  424. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite_json/with_ORCID_ID.yml +228 -0
  425. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_datacite_json/with_data_citation.yml +247 -0
  426. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/Dataset_in_schema_4_0.yml +120 -0
  427. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/Text_pass-thru.yml +106 -0
  428. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/book_chapter.yml +163 -0
  429. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/from_schema_org.yml +530 -0
  430. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/interactive_resource_without_dates.yml +75 -0
  431. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/maremma.yml +86 -0
  432. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/with_ORCID_ID.yml +228 -0
  433. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/with_data_citation.yml +247 -0
  434. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_jats_xml/with_editor.yml +355 -0
  435. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_rdf_xml/BlogPosting.yml +81 -0
  436. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_rdf_xml/BlogPosting_schema_org.yml +530 -0
  437. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_rdf_xml/journal_article.yml +247 -0
  438. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_rdf_xml/maremma.yml +86 -0
  439. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_rdf_xml/with_pages.yml +228 -0
  440. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/BlogPosting.yml +81 -0
  441. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/BlogPosting_schema_org.yml +530 -0
  442. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/Dataset.yml +120 -0
  443. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/alternate_name.yml +138 -0
  444. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/journal_article.yml +115 -0
  445. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/keywords_with_subject_scheme.yml +149 -0
  446. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/maremma.yml +86 -0
  447. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_ris/with_pages.yml +112 -0
  448. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Another_Schema_org_JSON.yml +120 -0
  449. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Funding.yml +192 -0
  450. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Funding_OpenAIRE.yml +150 -0
  451. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Schema_org_JSON.yml +98 -0
  452. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Schema_org_JSON_Cyark.yml +160 -0
  453. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/Schema_org_JSON_IsSupplementTo.yml +153 -0
  454. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/alternate_identifiers.yml +131 -0
  455. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/data_catalog.yml +136 -0
  456. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/geo_location_box.yml +181 -0
  457. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/interactive_resource_without_dates.yml +127 -0
  458. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/journal_article.yml +247 -0
  459. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/maremma_schema_org_JSON.yml +86 -0
  460. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/series_information.yml +174 -0
  461. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/subject_scheme.yml +199 -0
  462. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_schema_org/subject_scheme_multiple_keywords.yml +201 -0
  463. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_turtle/BlogPosting.yml +81 -0
  464. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_turtle/BlogPosting_schema_org.yml +530 -0
  465. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_turtle/Dataset.yml +120 -0
  466. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_turtle/journal_article.yml +247 -0
  467. data/spec/fixtures/vcr_cassettes/Briard_Metadata/write_metadata_as_turtle/with_pages.yml +228 -0
  468. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/default.yml +110 -0
  469. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/to_bibtex.yml +110 -0
  470. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/to_crossref_xml.yml +110 -0
  471. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/to_datacite.yml +110 -0
  472. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/to_schema_org.yml +110 -0
  473. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref_xml/default.yml +55 -0
  474. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref_xml/to_bibtex.yml +55 -0
  475. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref_xml/to_crossref_xml.yml +55 -0
  476. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref_xml/to_datacite.yml +55 -0
  477. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref_xml/to_schema_org.yml +55 -0
  478. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/default.yml +299 -0
  479. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_bibtex.yml +299 -0
  480. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_citation.yml +299 -0
  481. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_crossref_xml.yml +299 -0
  482. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_datacite.yml +299 -0
  483. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_jats.yml +299 -0
  484. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/crossref/to_schema_org.yml +299 -0
  485. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/default.yml +172 -0
  486. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/to_bibtex.yml +172 -0
  487. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/to_citation.yml +172 -0
  488. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/to_datacite.yml +172 -0
  489. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/to_jats.yml +172 -0
  490. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/datacite/to_schema_org.yml +172 -0
  491. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/schema_org/default.yml +1096 -0
  492. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/schema_org/to_datacite.yml +1096 -0
  493. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_from_id/schema_org/to_schema_org.yml +1098 -0
  494. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/crossref.yml +55 -0
  495. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/datacite.yml +55 -0
  496. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/jalc.yml +55 -0
  497. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/kisti.yml +55 -0
  498. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/medra.yml +55 -0
  499. data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/find_from_format_by_id/op.yml +55 -0
  500. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/change_metadata_as_datacite_xml/with_data_citation.yml +247 -0
  501. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/crossref.yml +55 -0
  502. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/datacite.yml +55 -0
  503. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/jalc.yml +55 -0
  504. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/kisti.yml +55 -0
  505. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/medra.yml +55 -0
  506. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/not_found.yml +55 -0
  507. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/doi_registration_agency/op.yml +55 -0
  508. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/find_from_format_by_ID/crossref.yml +55 -0
  509. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/find_from_format_by_ID/crossref_doi_not_url.yml +55 -0
  510. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/find_from_format_by_ID/datacite.yml +55 -0
  511. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/find_from_format_by_ID/datacite_doi_http.yml +55 -0
  512. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/find_from_format_by_ID/unknown_DOI_registration_agency.yml +55 -0
  513. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/hsh_to_fos_for_match.yml +221 -0
  514. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/hsh_to_fos_for_with_schemeUri_in_hash.yml +221 -0
  515. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/hsh_to_fos_match.yml +221 -0
  516. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/hsh_to_fos_no_match.yml +221 -0
  517. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/name_to_fos_for_match.yml +221 -0
  518. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/name_to_fos_match.yml +221 -0
  519. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/fos/name_to_fos_no_match.yml +221 -0
  520. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/from_schema_org/with_id.yml +221 -0
  521. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_cff_metadata/cff-converter-python.yml +200 -0
  522. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_cff_metadata/ruby-cff.yml +154 -0
  523. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_cff_metadata/ruby-cff_repository_url.yml +154 -0
  524. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_codemeta_metadata/maremma.yml +86 -0
  525. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_codemeta_metadata/metadata_reports.yml +93 -0
  526. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/DOI_with_ORCID_ID.yml +337 -0
  527. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/DOI_with_SICI_DOI.yml +347 -0
  528. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/DOI_with_data_citation.yml +170 -0
  529. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/JaLC.yml +384 -0
  530. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/KISTI.yml +330 -0
  531. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/OP.yml +969 -0
  532. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/affiliation_is_space.yml +358 -0
  533. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/another_book.yml +312 -0
  534. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/another_book_chapter.yml +465 -0
  535. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/article_id_as_page_number.yml +276 -0
  536. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/author_literal.yml +492 -0
  537. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/book.yml +523 -0
  538. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/book_chapter.yml +377 -0
  539. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/book_chapter_with_RDF_for_container.yml +336 -0
  540. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/book_oup.yml +289 -0
  541. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/component.yml +289 -0
  542. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/dataset.yml +300 -0
  543. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/dataset_usda.yml +341 -0
  544. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/date_in_future.yml +570 -0
  545. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/dissertation.yml +301 -0
  546. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/empty_given_name.yml +303 -0
  547. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/invalid_date.yml +307 -0
  548. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_article.yml +461 -0
  549. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_article_original_language_title.yml +276 -0
  550. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_article_with.yml +908 -0
  551. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_article_with_RDF_for_container.yml +519 -0
  552. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_article_with_funding.yml +456 -0
  553. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/journal_issue.yml +270 -0
  554. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/mEDRA.yml +310 -0
  555. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/markup.yml +329 -0
  556. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/missing_creator.yml +307 -0
  557. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/multiple_issn.yml +393 -0
  558. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/multiple_titles.yml +265 -0
  559. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/multiple_titles_with_missing.yml +860 -0
  560. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/not_found_error.yml +209 -0
  561. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/peer_review.yml +287 -0
  562. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/posted_content.yml +326 -0
  563. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/posted_content_copernicus.yml +297 -0
  564. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/report_osti.yml +315 -0
  565. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/vor_with_url.yml +451 -0
  566. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/yet_another_book.yml +816 -0
  567. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/yet_another_book_chapter.yml +324 -0
  568. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_raw/journal_article.yml +110 -0
  569. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datacite_metadata/dissertation.yml +152 -0
  570. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datacite_metadata/funding_references.yml +175 -0
  571. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datacite_metadata/subject_scheme.yml +328 -0
  572. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date/publication_date.yml +221 -0
  573. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_date_parts/date.yml +221 -0
  574. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_date_parts/year-month.yml +221 -0
  575. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_date_parts/year.yml +221 -0
  576. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_parts/date.yml +221 -0
  577. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_parts/year-month.yml +221 -0
  578. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_from_parts/year.yml +221 -0
  579. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_parts/date.yml +221 -0
  580. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_parts/year-month.yml +221 -0
  581. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_date_parts/year.yml +221 -0
  582. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datetime_from_time/future.yml +221 -0
  583. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datetime_from_time/invalid.yml +221 -0
  584. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datetime_from_time/nil.yml +221 -0
  585. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datetime_from_time/past.yml +221 -0
  586. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datetime_from_time/present.yml +221 -0
  587. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_one_author/has_familyName.yml +133 -0
  588. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_one_author/has_name_in_display-order_with_ORCID.yml +153 -0
  589. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_one_author/name_with_affiliation_crossref.yml +247 -0
  590. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_one_author/only_familyName_and_givenName.yml +467 -0
  591. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/BlogPosting.yml +530 -0
  592. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/BlogPosting_with_new_DOI.yml +530 -0
  593. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/get_schema_org_metadata_front_matter/BlogPosting.yml +534 -0
  594. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/harvard_dataverse.yml +1838 -0
  595. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/pangaea.yml +467 -0
  596. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/upstream_blog.yml +885 -0
  597. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_schema_org_metadata/zenodo.yml +583 -0
  598. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_series_information/only_title.yml +221 -0
  599. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_series_information/title_and_pages.yml +221 -0
  600. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_series_information/title_volume_and_pages.yml +221 -0
  601. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_series_information/title_volume_issue_and_pages.yml +221 -0
  602. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/github/github_as_cff_url.yml +221 -0
  603. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/github/github_as_codemeta_url.yml +221 -0
  604. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/github/github_from_url.yml +221 -0
  605. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/github/github_from_url_cff_file.yml +221 -0
  606. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/github/github_from_url_file.yml +221 -0
  607. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/handle_input/DOI_RA_not_Crossref_or_DataCite.yml +55 -0
  608. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/handle_input/unknown_DOI_prefix.yml +55 -0
  609. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/json_schema_errors/is_valid.yml +221 -0
  610. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_cc_url/not_found.yml +221 -0
  611. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_cc_url/with_trailing_slash.yml +221 -0
  612. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_cc_url/with_trailing_slash_and_to_https.yml +221 -0
  613. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/doi.yml +221 -0
  614. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/doi_as_url.yml +221 -0
  615. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/filename.yml +221 -0
  616. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/ftp.yml +221 -0
  617. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/invalid_url.yml +221 -0
  618. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/sandbox_via_options.yml +221 -0
  619. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/sandbox_via_url.yml +221 -0
  620. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/string.yml +221 -0
  621. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/url.yml +221 -0
  622. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_id/url_with_utf-8.yml +221 -0
  623. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_issn/from_array.yml +221 -0
  624. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_issn/from_empty_array.yml +221 -0
  625. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_issn/from_hash.yml +221 -0
  626. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_issn/from_string.yml +221 -0
  627. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_url/uri.yml +221 -0
  628. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_url/with_trailing_slash.yml +221 -0
  629. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/normalize_url/with_trailing_slash_and_to_https.yml +221 -0
  630. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/array.yml +221 -0
  631. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/array_of_strings.yml +221 -0
  632. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/first.yml +221 -0
  633. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/hash.yml +221 -0
  634. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/hash_with_array_value.yml +221 -0
  635. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/nil.yml +221 -0
  636. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/parse_attributes/string.yml +221 -0
  637. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/random_doi/decode_anothe_doi.yml +221 -0
  638. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/random_doi/decode_doi.yml +221 -0
  639. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/random_doi/encode_doi.yml +221 -0
  640. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/sanitize/onlies_keep_specific_tags.yml +221 -0
  641. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/sanitize/removes_a_tags.yml +221 -0
  642. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/spdx/hsh_to_spdx_id.yml +221 -0
  643. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/spdx/hsh_to_spdx_not_found.yml +221 -0
  644. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/spdx/hsh_to_spdx_url.yml +221 -0
  645. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/spdx/name_to_spdx_exists.yml +221 -0
  646. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/spdx/name_to_spdx_id.yml +221 -0
  647. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/to_schema_org/with_id.yml +221 -0
  648. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/to_schema_org_identifiers/with_identifiers.yml +221 -0
  649. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid.yml +221 -0
  650. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_https.yml +221 -0
  651. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_id.yml +221 -0
  652. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_sandbox.yml +221 -0
  653. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_sandbox_https.yml +221 -0
  654. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_with_spaces.yml +221 -0
  655. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_wrong_id.yml +221 -0
  656. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid/validate_orcid_www.yml +221 -0
  657. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid_scheme/validate_orcid_scheme.yml +221 -0
  658. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid_scheme/validate_orcid_scheme_https.yml +221 -0
  659. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid_scheme/validate_orcid_scheme_trailing_slash.yml +221 -0
  660. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_orcid_scheme/validate_orcid_scheme_www.yml +221 -0
  661. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_url/DOI.yml +221 -0
  662. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_url/ISSN.yml +221 -0
  663. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_url/URL.yml +221 -0
  664. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/validate_url/string.yml +221 -0
  665. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/BlogPosting.yml +81 -0
  666. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/Dataset.yml +120 -0
  667. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/authors_with_affiliations.yml +186 -0
  668. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/climate_data.yml +74 -0
  669. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/from_schema_org.yml +530 -0
  670. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/keywords_subject_scheme.yml +149 -0
  671. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/maremma.yml +86 -0
  672. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/text.yml +100 -0
  673. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/with_data_citation.yml +247 -0
  674. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_bibtex/with_pages.yml +228 -0
  675. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_cff/Collection_of_Jupyter_notebooks.yml +143 -0
  676. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_cff/SoftwareSourceCode_Zenodo.yml +150 -0
  677. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_cff/SoftwareSourceCode_also_Zenodo.yml +93 -0
  678. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_cff/ruby-cff.yml +154 -0
  679. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/Dataset.yml +120 -0
  680. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/Journal_article.yml +247 -0
  681. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/Journal_article_vancouver_style.yml +299 -0
  682. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/Missing_author.yml +199 -0
  683. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/interactive_resource_without_dates.yml +75 -0
  684. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_citation/software_w/version.yml +86 -0
  685. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite.yml +76 -0
  686. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite_check_codemeta_v2.yml +76 -0
  687. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/another_schema_org_from_front-matter.yml +541 -0
  688. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/journal_article.yml +55 -0
  689. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/journal_article_from_datacite.yml +85 -0
  690. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/posted_content.yml +283 -0
  691. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/schema_org_from_another_science_blog.yml +123 -0
  692. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/schema_org_from_front_matter.yml +477 -0
  693. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/schema_org_from_upstream_blog.yml +1025 -0
  694. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/Another_dataset.yml +110 -0
  695. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/BlogPosting.yml +81 -0
  696. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/BlogPosting_schema_org.yml +530 -0
  697. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/Dataset.yml +120 -0
  698. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/container_title.yml +153 -0
  699. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/interactive_resource_without_dates.yml +75 -0
  700. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/journal_article.yml +247 -0
  701. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/keywords_subject_scheme.yml +149 -0
  702. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/maremma.yml +86 -0
  703. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/missing_creator.yml +199 -0
  704. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/multiple_abstracts.yml +101 -0
  705. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/organization_author.yml +314 -0
  706. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/software.yml +90 -0
  707. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/software_w/version.yml +86 -0
  708. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/with_only_first_page.yml +333 -0
  709. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csl/with_pages.yml +228 -0
  710. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csv/climate_data.yml +74 -0
  711. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csv/maremma.yml +86 -0
  712. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csv/text.yml +100 -0
  713. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csv/with_data_citation.yml +247 -0
  714. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_csv/with_pages.yml +228 -0
  715. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/dissertation.yml +218 -0
  716. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/from_schema_org.yml +530 -0
  717. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/journal_article.yml +407 -0
  718. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/maremma.yml +86 -0
  719. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/with_ORCID_ID.yml +228 -0
  720. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_datacite/with_data_citation.yml +247 -0
  721. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/Dataset_in_schema_4_0.yml +120 -0
  722. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/Text_pass-thru.yml +106 -0
  723. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/book_chapter.yml +163 -0
  724. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/from_schema_org.yml +530 -0
  725. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/interactive_resource_without_dates.yml +75 -0
  726. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/maremma.yml +86 -0
  727. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/with_ORCID_ID.yml +228 -0
  728. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/with_data_citation.yml +247 -0
  729. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_jats_xml/with_editor.yml +355 -0
  730. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_rdf_xml/BlogPosting.yml +81 -0
  731. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_rdf_xml/BlogPosting_schema_org.yml +530 -0
  732. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_rdf_xml/journal_article.yml +247 -0
  733. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_rdf_xml/maremma.yml +86 -0
  734. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_rdf_xml/with_pages.yml +228 -0
  735. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/BlogPosting.yml +81 -0
  736. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/BlogPosting_schema_org.yml +530 -0
  737. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/Dataset.yml +120 -0
  738. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/alternate_name.yml +138 -0
  739. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/journal_article.yml +115 -0
  740. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/keywords_with_subject_scheme.yml +149 -0
  741. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/maremma.yml +86 -0
  742. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_ris/with_pages.yml +112 -0
  743. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Another_Schema_org_JSON.yml +120 -0
  744. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Funding.yml +192 -0
  745. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Funding_OpenAIRE.yml +150 -0
  746. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Schema_org_JSON.yml +98 -0
  747. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Schema_org_JSON_Cyark.yml +160 -0
  748. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/Schema_org_JSON_IsSupplementTo.yml +153 -0
  749. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/alternate_identifiers.yml +131 -0
  750. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/data_catalog.yml +136 -0
  751. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/geo_location_box.yml +181 -0
  752. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/interactive_resource_without_dates.yml +127 -0
  753. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/journal_article.yml +247 -0
  754. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/maremma_schema_org_JSON.yml +86 -0
  755. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/series_information.yml +174 -0
  756. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/subject_scheme.yml +199 -0
  757. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_schema_org/subject_scheme_multiple_keywords.yml +201 -0
  758. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_turtle/BlogPosting.yml +81 -0
  759. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_turtle/BlogPosting_schema_org.yml +530 -0
  760. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_turtle/Dataset.yml +120 -0
  761. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_turtle/journal_article.yml +247 -0
  762. data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_turtle/with_pages.yml +228 -0
  763. data/spec/fixtures/vivli.xml +17 -0
  764. data/spec/metadata_spec.rb +147 -0
  765. data/spec/readers/bibtex_reader_spec.rb +58 -0
  766. data/spec/readers/cff_reader_spec.rb +148 -0
  767. data/spec/readers/codemeta_reader_spec.rb +116 -0
  768. data/spec/readers/crossref_reader_spec.rb +919 -0
  769. data/spec/readers/crossref_xml_reader_spec.rb +948 -0
  770. data/spec/readers/csl_reader_spec.rb +61 -0
  771. data/spec/readers/datacite_reader_spec.rb +156 -0
  772. data/spec/readers/npm_reader_spec.rb +69 -0
  773. data/spec/readers/ris_reader_spec.rb +70 -0
  774. data/spec/readers/schema_org_reader_spec.rb +416 -0
  775. data/spec/schema_utils_spec.rb +16 -0
  776. data/spec/spec_helper.rb +96 -0
  777. data/spec/utils_spec.rb +631 -0
  778. data/spec/writers/bibtex_writer_spec.rb +160 -0
  779. data/spec/writers/cff_writer_spec.rb +118 -0
  780. data/spec/writers/citation_writer_spec.rb +51 -0
  781. data/spec/writers/codemeta_writer_spec.rb +47 -0
  782. data/spec/writers/crossref_xml_writer_spec.rb +173 -0
  783. data/spec/writers/csl_writer_spec.rb +291 -0
  784. data/spec/writers/csv_writer_spec.rb +82 -0
  785. data/spec/writers/datacite_writer_spec.rb +150 -0
  786. data/spec/writers/jats_writer_spec.rb +210 -0
  787. data/spec/writers/rdf_xml_writer_spec.rb +91 -0
  788. data/spec/writers/ris_writer_spec.rb +206 -0
  789. data/spec/writers/schema_org_writer_spec.rb +301 -0
  790. data/spec/writers/turtle_writer_spec.rb +85 -0
  791. metadata +1514 -0
@@ -0,0 +1,85 @@
1
+ ---
2
+ http_interactions:
3
+ - request:
4
+ method: get
5
+ uri: https://api.datacite.org/dois/10.2312/geowissenschaften.1989.7.181?include=media,client
6
+ body:
7
+ encoding: UTF-8
8
+ string: ''
9
+ headers:
10
+ Connection:
11
+ - close
12
+ Host:
13
+ - api.datacite.org
14
+ User-Agent:
15
+ - http.rb/5.1.1
16
+ response:
17
+ status:
18
+ code: 200
19
+ message: OK
20
+ headers:
21
+ Date:
22
+ - Sun, 12 Mar 2023 22:21:28 GMT
23
+ Content-Type:
24
+ - application/json; charset=utf-8
25
+ Transfer-Encoding:
26
+ - chunked
27
+ Connection:
28
+ - close
29
+ Status:
30
+ - 200 OK
31
+ X-Anonymous-Consumer:
32
+ - 'true'
33
+ Cache-Control:
34
+ - max-age=0, private, must-revalidate
35
+ Vary:
36
+ - Accept-Encoding
37
+ Referrer-Policy:
38
+ - strict-origin-when-cross-origin
39
+ X-Permitted-Cross-Domain-Policies:
40
+ - none
41
+ X-Xss-Protection:
42
+ - 1; mode=block
43
+ X-Request-Id:
44
+ - 1152d562-56ac-4bb9-9591-2e002f988053
45
+ X-Download-Options:
46
+ - noopen
47
+ Etag:
48
+ - W/"3fe8d01847cc194b5171f52f04049a50"
49
+ X-Frame-Options:
50
+ - SAMEORIGIN
51
+ X-Runtime:
52
+ - '0.023037'
53
+ X-Content-Type-Options:
54
+ - nosniff
55
+ X-Powered-By:
56
+ - Phusion Passenger(R) 6.0.17
57
+ Server:
58
+ - nginx/1.18.0 + Phusion Passenger(R) 6.0.17
59
+ Access-Control-Allow-Credentials:
60
+ - 'true'
61
+ Access-Control-Allow-Methods:
62
+ - GET, POST, PUT, PATCH, DELETE, OPTIONS
63
+ Access-Control-Allow-Headers:
64
+ - Accept,Access-Control-Allow-Origin,Access-Control-Expose-Headers,Access-Control-Allow-Methods,Access-Control-Allow-Headers,Authorization,Cache-Control,Content-Type,DNT,If-Modified-Since,Keep-Alive,Origin,User-Agent,X-Mx-ReqToken,X-Requested-With
65
+ Access-Control-Expose-Headers:
66
+ - Authorization
67
+ body:
68
+ encoding: UTF-8
69
+ string: '{"data":{"id":"10.2312/geowissenschaften.1989.7.181","type":"dois","attributes":{"doi":"10.2312/geowissenschaften.1989.7.181","prefix":"10.2312","suffix":"geowissenschaften.1989.7.181","identifiers":[{"identifier":"awi:doi~10.2312%2Fgeowissenschaften.1989.7.181","identifierType":"ftx-old"},{"identifier":"awi:7058a56c5e43afd705af945d01536b9aaeeee491","identifierType":"ftx-id"}],"alternateIdentifiers":[{"alternateIdentifierType":"ftx-old","alternateIdentifier":"awi:doi~10.2312%2Fgeowissenschaften.1989.7.181"},{"alternateIdentifierType":"ftx-id","alternateIdentifier":"awi:7058a56c5e43afd705af945d01536b9aaeeee491"}],"creators":[{"name":"Mossman,
70
+ David J","nameType":"Personal","givenName":"David J","familyName":"Mossman","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"An
71
+ Overview of the Geology of Canadian Gold Occurrences"}],"publisher":"VCH Verlagsgesellschaft
72
+ mbH","container":{"type":"Series","title":"Die Geowissenschaften"},"publicationYear":1989,"subjects":[{"subject":"Earth
73
+ Science","subjectScheme":"linsearch(mapping)","classificationCode":"geo"},{"subject":"Earth
74
+ sciences and geology","subjectScheme":"ddc","classificationCode":"550"}],"contributors":[{"name":"TIB-Technische
75
+ Informationsbibliothek Universitätsbibliothek Hannover","nameType":"Organizational","affiliation":[],"contributorType":"HostingInstitution","nameIdentifiers":[]},{"name":"Alfred-Wegener-Institut
76
+ Für Polar- Und Meeresforschung","affiliation":[],"contributorType":"DataManager","nameIdentifiers":[]}],"dates":[{"date":"1989-01-01","dateType":"Issued"},{"date":"1989-01-01","dateType":"Copyrighted"}],"language":"en","types":{"ris":"JOUR","bibtex":"article","citeproc":"article-journal","schemaOrg":"ScholarlyArticle","resourceType":"Electronic
77
+ Resource","resourceTypeGeneral":"JournalArticle"},"relatedIdentifiers":[{"relationType":"IsPublishedIn","relatedIdentifier":"0933-0704","relatedIdentifierType":"ISSN"}],"relatedItems":[{"issue":"7","titles":[{"title":"Die
78
+ Geowissenschaften"}],"volume":"7","creators":[],"lastPage":"186","firstPage":"181","contributors":[],"relationType":"IsPublishedIn","relatedItemType":"Journal","relatedItemIdentifier":{"relatedItemIdentifier":"0933-0704","relatedItemIdentifierType":"ISSN"}}],"sizes":["6
79
+ pages"],"formats":["application/pdf"],"version":"1.0","rightsList":[{"rights":"VCH
80
+ Verlagsgesellschaft mbH"}],"descriptions":[{"descriptionType":"Abstract"},{"description":"Die
81
+ Geowissenschaften","descriptionType":"SeriesInformation"}],"geoLocations":[],"fundingReferences":[],"xml":"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","url":"https://www.tib.eu/suchen/id/awi:7058a56c5e43afd705af945d01536b9aaeeee491","contentUrl":null,"metadataVersion":10,"schemaVersion":"http://datacite.org/schema/kernel-4","source":"mds","isActive":true,"state":"findable","reason":null,"viewCount":0,"viewsOverTime":[],"downloadCount":0,"downloadsOverTime":[],"referenceCount":0,"citationCount":0,"citationsOverTime":[],"partCount":0,"partOfCount":0,"versionCount":0,"versionOfCount":0,"created":"2011-12-13T16:36:34.000Z","registered":"2011-08-19T09:10:02.000Z","published":"1989","updated":"2022-03-24T00:30:25.000Z"},"relationships":{"client":{"data":{"id":"tib.awi","type":"clients"}},"provider":{"data":{"id":"ruwk","type":"providers"}},"media":{"data":{"id":"10.2312/geowissenschaften.1989.7.181","type":"media"}},"references":{"data":[]},"citations":{"data":[]},"parts":{"data":[]},"partOf":{"data":[]},"versions":{"data":[]},"versionOf":{"data":[]}}},"included":[{"id":"tib.awi","type":"clients","attributes":{"name":"Alfred
82
+ Wegener Institute","symbol":"TIB.AWI","year":2011,"alternateName":null,"description":"TIB-Portal
83
+ Betrieb","language":[],"clientType":"repository","domains":"*","re3data":null,"opendoar":null,"issn":{},"url":null,"created":"2011-11-24T12:21:02.000Z","updated":"2020-12-18T15:03:59.000Z","isActive":true},"relationships":{"provider":{"data":{"id":"ruwk","type":"providers"}},"consortium":{"data":{"id":"tibco","type":"providers"}},"prefixes":{"data":[{"id":"10.48433","type":"prefixes"}]}}}]}'
84
+ recorded_at: Sun, 12 Mar 2023 22:21:28 GMT
85
+ recorded_with: VCR 6.1.0
@@ -0,0 +1,283 @@
1
+ ---
2
+ http_interactions:
3
+ - request:
4
+ method: get
5
+ uri: https://doi.org/ra/10.1101
6
+ body:
7
+ encoding: UTF-8
8
+ string: ''
9
+ headers:
10
+ Connection:
11
+ - close
12
+ Host:
13
+ - doi.org
14
+ User-Agent:
15
+ - http.rb/5.1.1
16
+ response:
17
+ status:
18
+ code: 200
19
+ message: OK
20
+ headers:
21
+ Date:
22
+ - Sun, 12 Mar 2023 22:21:27 GMT
23
+ Content-Type:
24
+ - application/json;charset=UTF-8
25
+ Transfer-Encoding:
26
+ - chunked
27
+ Connection:
28
+ - close
29
+ Permissions-Policy:
30
+ - interest-cohort=(),browsing-topics=()
31
+ Cf-Cache-Status:
32
+ - DYNAMIC
33
+ Report-To:
34
+ - '{"endpoints":[{"url":"https:\/\/a.nel.cloudflare.com\/report\/v3?s=7PRkV2ygXD0tjzZR8bhCX7Q7e9IKahTS8pzTMadkTmsoZIkp2WWPw4KhMf11PwosKuQEvCIvf%2BTtcQBVoz4HsWR0OjZwkIY1KZDRITlxMF6FchidO7%2BThDmHbZpywOPVe%2B%2FuO54%3D"}],"group":"cf-nel","max_age":604800}'
35
+ Nel:
36
+ - '{"success_fraction":0,"report_to":"cf-nel","max_age":604800}'
37
+ Strict-Transport-Security:
38
+ - max-age=31536000; includeSubDomains; preload
39
+ Server:
40
+ - cloudflare
41
+ Cf-Ray:
42
+ - 7a6f6e2608250ba4-AMS
43
+ Alt-Svc:
44
+ - h3=":443"; ma=86400, h3-29=":443"; ma=86400
45
+ body:
46
+ encoding: UTF-8
47
+ string: |-
48
+ [
49
+ {
50
+ "DOI": "10.1101",
51
+ "RA": "Crossref"
52
+ }
53
+ ]
54
+ recorded_at: Sun, 12 Mar 2023 22:21:27 GMT
55
+ - request:
56
+ method: get
57
+ uri: https://api.crossref.org/works/10.1101/2020.12.01.406702
58
+ body:
59
+ encoding: UTF-8
60
+ string: ''
61
+ headers:
62
+ Connection:
63
+ - close
64
+ Host:
65
+ - api.crossref.org
66
+ User-Agent:
67
+ - http.rb/5.1.1
68
+ response:
69
+ status:
70
+ code: 200
71
+ message: OK
72
+ headers:
73
+ Date:
74
+ - Sun, 12 Mar 2023 22:21:27 GMT
75
+ Content-Type:
76
+ - application/json
77
+ Transfer-Encoding:
78
+ - chunked
79
+ Access-Control-Expose-Headers:
80
+ - Link
81
+ Access-Control-Allow-Headers:
82
+ - X-Requested-With, Accept, Accept-Encoding, Accept-Charset, Accept-Language,
83
+ Accept-Ranges, Cache-Control
84
+ Access-Control-Allow-Origin:
85
+ - "*"
86
+ Server:
87
+ - Jetty(9.4.40.v20210413)
88
+ X-Ratelimit-Limit:
89
+ - '50'
90
+ X-Ratelimit-Interval:
91
+ - 1s
92
+ X-Api-Pool:
93
+ - public
94
+ X-Rate-Limit-Limit:
95
+ - '50'
96
+ X-Rate-Limit-Interval:
97
+ - 1s
98
+ Permissions-Policy:
99
+ - interest-cohort=()
100
+ Connection:
101
+ - close
102
+ body:
103
+ encoding: UTF-8
104
+ string: '{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"institution":[{"name":"bioRxiv"}],"indexed":{"date-parts":[[2022,5,25]],"date-time":"2022-05-25T20:13:20Z","timestamp":1653509600935},"posted":{"date-parts":[[2020,12,1]]},"group-title":"Microbiology","reference-count":61,"publisher":"Cold
105
+ Spring Harbor Laboratory","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"accepted":{"date-parts":[[2022,1,5]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Bacterial
106
+ membrane lipids are critical for membrane bilayer formation, cell division,
107
+ protein localization, stress responses, and pathogenesis. Despite their critical
108
+ roles, membrane lipids have not been fully elucidated for many pathogens.
109
+ Here, we report the discovery of a novel cationic glycolipid, Lysyl-Glucosyl-Diacylglycerol
110
+ (Lys-Glc-DAG) that is synthesized in high abundance by the bacterium <jats:italic>Streptococcus
111
+ agalactiae<\/jats:italic> (Group B <jats:italic>Streptococcus<\/jats:italic>,
112
+ GBS). To our knowledge, Lys-Glc-DAG is more positively charged than any other
113
+ known lipids. Lys-Glc-DAG carries two positive net charges per molecule, distinct
114
+ from the widely described lysylated phospholipid Lysyl-phosphatidylglycerol
115
+ (Lys-PG) which carries one positive net charge due to the presence of a negatively
116
+ charged phosphate moiety. We use normal phase liquid chromatography (NPLC)
117
+ coupled with electrospray ionization (ESI) high-resolution tandem mass spectrometry
118
+ (HRMS\/MS) and genetic approaches to determine that Lys-Glc-DAG is synthesized
119
+ by the enzyme MprF in GBS, which covalently modifies the neutral glycolipid
120
+ Glc-DAG with the cationic amino acid lysine. GBS is a leading cause of neonatal
121
+ meningitis, which requires traversal of the endothelial blood-brain barrier
122
+ (BBB). We demonstrate that GBS strains lacking <jats:italic>mprF<\/jats:italic>
123
+ exhibit a significant decrease in the ability to invade BBB endothelial cells.
124
+ Further, mice challenged with a GBS\u0394<jats:italic>mprF<\/jats:italic>
125
+ mutant developed bacteremia comparably to Wild-Type infected mice yet had
126
+ less recovered bacteria from brain tissue and a lower incidence of meningitis.
127
+ Thus, our data suggest that Lys-Glc-DAG may contribute to bacterial uptake
128
+ into host cells and disease progression. Importantly, our discovery provides
129
+ a platform for further study of cationic lipids at the host-pathogen interface.<\/jats:p>","DOI":"10.1101\/2020.12.01.406702","type":"posted-content","created":{"date-parts":[[2020,12,2]],"date-time":"2020-12-02T05:50:27Z","timestamp":1606888227000},"source":"Crossref","is-referenced-by-count":1,"title":["Identification
130
+ of a novel cationic glycolipid in <i>Streptococcus agalactiae<\/i> that contributes
131
+ to brain entry and meningitis"],"prefix":"10.1101","author":[{"ORCID":"http:\/\/orcid.org\/0000-0002-9346-671X","authenticated-orcid":false,"given":"Luke
132
+ R.","family":"Joyce","sequence":"first","affiliation":[]},{"ORCID":"http:\/\/orcid.org\/0000-0002-2864-6212","authenticated-orcid":false,"given":"Haider
133
+ S.","family":"Manzer","sequence":"additional","affiliation":[]},{"ORCID":"http:\/\/orcid.org\/0000-0002-2555-4582","authenticated-orcid":false,"given":"J\u00e9ssica
134
+ da C.","family":"Mendon\u00e7a","sequence":"additional","affiliation":[]},{"ORCID":"http:\/\/orcid.org\/0000-0001-7641-4136","authenticated-orcid":false,"given":"Ricardo","family":"Villarreal","sequence":"additional","affiliation":[]},{"ORCID":"http:\/\/orcid.org\/0000-0001-6007-0033","authenticated-orcid":false,"given":"Prescilla
135
+ E.","family":"Nagao","sequence":"additional","affiliation":[]},{"ORCID":"http:\/\/orcid.org\/0000-0003-4232-6837","authenticated-orcid":false,"given":"Kelly
136
+ S.","family":"Doran","sequence":"additional","affiliation":[]},{"ORCID":"http:\/\/orcid.org\/0000-0002-7343-9271","authenticated-orcid":false,"given":"Kelli
137
+ L.","family":"Palmer","sequence":"additional","affiliation":[]},{"ORCID":"http:\/\/orcid.org\/0000-0002-8082-3423","authenticated-orcid":false,"given":"Ziqiang","family":"Guan","sequence":"additional","affiliation":[]}],"member":"246","reference":[{"key":"2022011102351436000_2020.12.01.406702v5.1","doi-asserted-by":"publisher","DOI":"10.1002\/iub.240"},{"key":"2022011102351436000_2020.12.01.406702v5.2","first-page":"e02552","article-title":"Streptococcus
138
+ mitis and S. oralis Lack a Requirement for CdsA, the Enzyme Required for Synthesis
139
+ of Major Membrane Phospholipids in Bacteria","volume":"61","year":"2017","journal-title":"Antimicrobial
140
+ agents and chemotherapy"},{"key":"2022011102351436000_2020.12.01.406702v5.3","first-page":"e00495","article-title":"Phosphatidylcholine
141
+ Biosynthesis in Mitis Group Streptococci via Host Metabolite Scavenging","volume":"201","year":"2019","journal-title":"Journal
142
+ of bacteriology"},{"key":"2022011102351436000_2020.12.01.406702v5.4","doi-asserted-by":"publisher","DOI":"10.1146\/annurev.mi.32.100178.000353"},{"key":"2022011102351436000_2020.12.01.406702v5.5","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2958.2004.04266.x"},{"key":"2022011102351436000_2020.12.01.406702v5.6","doi-asserted-by":"publisher","DOI":"10.1093\/cid\/cix660"},{"key":"2022011102351436000_2020.12.01.406702v5.7","doi-asserted-by":"publisher","DOI":"10.1128\/CMR.11.3.497"},{"key":"2022011102351436000_2020.12.01.406702v5.8","doi-asserted-by":"publisher","DOI":"10.1016\/S0022-3476(85)80342-5"},{"key":"2022011102351436000_2020.12.01.406702v5.9","doi-asserted-by":"crossref","unstructured":"Ohlsson
143
+ A , Shah VS . Intrapartum antibiotics for known maternal Group B Streptococcal
144
+ colonization. The Cochrane database of systematic reviews. 2014:CD007467.","DOI":"10.1002\/14651858.CD007467.pub4"},{"key":"2022011102351436000_2020.12.01.406702v5.10","doi-asserted-by":"publisher","DOI":"10.1016\/j.jmb.2019.01.035"},{"key":"2022011102351436000_2020.12.01.406702v5.11","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0931493100"},{"key":"2022011102351436000_2020.12.01.406702v5.12","doi-asserted-by":"publisher","DOI":"10.1016\/0005-2760(77)90046-7"},{"key":"2022011102351436000_2020.12.01.406702v5.13","doi-asserted-by":"crossref","unstructured":"Joyce
145
+ LR , Guan Z , Palmer KL . Streptococcus pneumoniae, S. pyogenes and S. agalactiae
146
+ membrane phospholipid remodelling in response to human serum. Microbiology
147
+ (Reading). 2021;167(5).","DOI":"10.1099\/mic.0.001048"},{"key":"2022011102351436000_2020.12.01.406702v5.14","doi-asserted-by":"publisher","DOI":"10.1172\/JCI23829"},{"key":"2022011102351436000_2020.12.01.406702v5.15","doi-asserted-by":"crossref","first-page":"1310","DOI":"10.1016\/j.bbalip.2016.11.013","article-title":"Bacterial
148
+ aminoacyl phospholipids - Biosynthesis and role in basic cellular processes
149
+ and pathogenicity","volume":"1862","year":"2017","journal-title":"Biochimica
150
+ et biophysica acta Molecular and cell biology of lipids"},{"key":"2022011102351436000_2020.12.01.406702v5.16","doi-asserted-by":"publisher","DOI":"10.1084\/jem.193.9.1067"},{"key":"2022011102351436000_2020.12.01.406702v5.17","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.73.12.8033-8038.2005"},{"key":"2022011102351436000_2020.12.01.406702v5.18","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.57.10.3058-3065.1989"},{"key":"2022011102351436000_2020.12.01.406702v5.19","doi-asserted-by":"publisher","DOI":"10.1084\/jem.142.1.165"},{"key":"2022011102351436000_2020.12.01.406702v5.20","doi-asserted-by":"crossref","first-page":"183","DOI":"10.1128\/jcm.6.2.183-184.1977","article-title":"Nontypable
151
+ Group B Streptococci isolated from human sources","volume":"6","year":"1977","journal-title":"Journal
152
+ of clinical microbiology"},{"key":"2022011102351436000_2020.12.01.406702v5.21","doi-asserted-by":"publisher","DOI":"10.1097\/01.ftd.0000179845.53213.39"},{"key":"2022011102351436000_2020.12.01.406702v5.22","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkl838"},{"key":"2022011102351436000_2020.12.01.406702v5.23","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0800006105"},{"key":"2022011102351436000_2020.12.01.406702v5.24","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1007848"},{"key":"2022011102351436000_2020.12.01.406702v5.25","first-page":"1","article-title":"Cas9
153
+ contributes to Group B Streptococcal colonization and disease","volume":"10","year":"2019","journal-title":"Frontiers
154
+ in Microbiology"},{"key":"2022011102351436000_2020.12.01.406702v5.26","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.00870-14"},{"key":"2022011102351436000_2020.12.01.406702v5.27","doi-asserted-by":"crossref","unstructured":"Spencer
155
+ BL , Chatterjee A , Duerkop BA , Baker CJ , Doran KS . Complete Genome Sequence
156
+ of Neonatal Clinical Group B Streptococcal Isolate CJB111. Microbiology resource
157
+ announcements. 2021;10.","DOI":"10.1128\/MRA.01268-20"},{"key":"2022011102351436000_2020.12.01.406702v5.28","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0153891"},{"key":"2022011102351436000_2020.12.01.406702v5.29","doi-asserted-by":"publisher","DOI":"10.3391\/mbi.2015.6.1.01"},{"key":"2022011102351436000_2020.12.01.406702v5.30","doi-asserted-by":"publisher","DOI":"10.1074\/jbc.M109.046367"},{"key":"2022011102351436000_2020.12.01.406702v5.31","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1511167112"},{"key":"2022011102351436000_2020.12.01.406702v5.32","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.55.4.934"},{"key":"2022011102351436000_2020.12.01.406702v5.33","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1002891"},{"key":"2022011102351436000_2020.12.01.406702v5.34","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1005816"},{"key":"2022011102351436000_2020.12.01.406702v5.35","doi-asserted-by":"publisher","DOI":"10.4155\/tde-2016-0006"},{"key":"2022011102351436000_2020.12.01.406702v5.36","doi-asserted-by":"publisher","DOI":"10.1038\/sj.gt.3301506"},{"key":"2022011102351436000_2020.12.01.406702v5.37","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.27.2.444-448.1980"},{"key":"2022011102351436000_2020.12.01.406702v5.38","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1002190"},{"key":"2022011102351436000_2020.12.01.406702v5.39","doi-asserted-by":"publisher","DOI":"10.1016\/j.micpath.2009.05.003"},{"key":"2022011102351436000_2020.12.01.406702v5.40","doi-asserted-by":"publisher","DOI":"10.1128\/JB.182.6.1529-1540.2000"},{"key":"2022011102351436000_2020.12.01.406702v5.41","doi-asserted-by":"publisher","DOI":"10.1128\/JB.185.4.1208-1217.2003"},{"key":"2022011102351436000_2020.12.01.406702v5.42","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01882-18"},{"key":"2022011102351436000_2020.12.01.406702v5.43","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.55.12.3119-3123.1989"},{"key":"2022011102351436000_2020.12.01.406702v5.44","doi-asserted-by":"crossref","first-page":"3539","DOI":"10.1128\/aem.63.9.3539-3547.1997","article-title":"New
158
+ genetic techniques for Group B Streptococci: High-efficiency transformation,
159
+ maintenance of temperature-sensitive pWV01 plasmids, and mutagenesis with
160
+ Tn917","volume":"63","year":"1997","journal-title":"Applied and Environmental
161
+ Microbiology"},{"key":"2022011102351436000_2020.12.01.406702v5.45","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1212797109"},{"key":"2022011102351436000_2020.12.01.406702v5.46","doi-asserted-by":"publisher","DOI":"10.1074\/jbc.M116.762070"},{"key":"2022011102351436000_2020.12.01.406702v5.47","doi-asserted-by":"publisher","DOI":"10.1172\/JCI74159"},{"key":"2022011102351436000_2020.12.01.406702v5.48","doi-asserted-by":"crossref","first-page":"462","DOI":"10.1038\/ncomms1474","article-title":"Bacterial
162
+ Pili exploit integrin machinery to promote immune activation and efficient
163
+ blood-brain barrier penetration","volume":"2","year":"2011","journal-title":"Nature
164
+ communications"},{"key":"2022011102351436000_2020.12.01.406702v5.49","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.57.10.3058-3065.1989"},{"key":"2022011102351436000_2020.12.01.406702v5.50","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.00870-14"},{"key":"2022011102351436000_2020.12.01.406702v5.51","doi-asserted-by":"crossref","unstructured":"Spencer
165
+ BL , Chatterjee A , Duerkop BA , Baker CJ , Doran KS . Complete Genome Sequence
166
+ of Neonatal Clinical Group B Streptococcal Isolate CJB111. Microbiology resource
167
+ announcements. 2021;10.","DOI":"10.1128\/MRA.01268-20"},{"key":"2022011102351436000_2020.12.01.406702v5.52","doi-asserted-by":"publisher","DOI":"10.1084\/jem.142.1.165"},{"key":"2022011102351436000_2020.12.01.406702v5.53","first-page":"e01338","article-title":"Complete
168
+ Genome Sequence of Streptococcus agalactiae CNCTC 10\/84, a Hypervirulent
169
+ Sequence Type 26 Strain","volume":"2","year":"2014","journal-title":"Genome
170
+ announcements"},{"key":"2022011102351436000_2020.12.01.406702v5.54","doi-asserted-by":"crossref","first-page":"183","DOI":"10.1128\/jcm.6.2.183-184.1977","article-title":"Nontypable
171
+ Group B Streptococci isolated from human sources","volume":"6","year":"1977","journal-title":"Journal
172
+ of clinical microbiology"},{"key":"2022011102351436000_2020.12.01.406702v5.55","doi-asserted-by":"publisher","DOI":"10.1099\/00207713-39-4-471"},{"key":"2022011102351436000_2020.12.01.406702v5.56","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/21.7.1677"},{"key":"2022011102351436000_2020.12.01.406702v5.57","doi-asserted-by":"publisher","DOI":"10.1016\/0022-2836(80)90283-1"},{"key":"2022011102351436000_2020.12.01.406702v5.58","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00153-10"},{"key":"2022011102351436000_2020.12.01.406702v5.59","doi-asserted-by":"publisher","DOI":"10.1128\/JB.182.6.1529-1540.2000"},{"key":"2022011102351436000_2020.12.01.406702v5.60","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01882-18"},{"key":"2022011102351436000_2020.12.01.406702v5.61","doi-asserted-by":"publisher","DOI":"10.1128\/JB.185.4.1208-1217.2003"}],"container-title":[],"original-title":[],"link":[{"URL":"https:\/\/syndication.highwire.org\/content\/doi\/10.1101\/2020.12.01.406702","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,5,25]],"date-time":"2022-05-25T19:51:18Z","timestamp":1653508278000},"score":1,"resource":{"primary":{"URL":"http:\/\/biorxiv.org\/lookup\/doi\/10.1101\/2020.12.01.406702"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,12,1]]},"references-count":61,"URL":"http:\/\/dx.doi.org\/10.1101\/2020.12.01.406702","relation":{"is-preprint-of":[{"id-type":"doi","id":"10.1371\/journal.pbio.3001555","asserted-by":"subject"}]},"published":{"date-parts":[[2020,12,1]]},"subtype":"preprint"}}'
173
+ recorded_at: Sun, 12 Mar 2023 22:21:28 GMT
174
+ - request:
175
+ method: get
176
+ uri: https://doi.org/ra/10.1101
177
+ body:
178
+ encoding: UTF-8
179
+ string: ''
180
+ headers:
181
+ Connection:
182
+ - close
183
+ Host:
184
+ - doi.org
185
+ User-Agent:
186
+ - http.rb/5.1.1
187
+ response:
188
+ status:
189
+ code: 200
190
+ message: OK
191
+ headers:
192
+ Date:
193
+ - Sun, 12 Mar 2023 22:21:28 GMT
194
+ Content-Type:
195
+ - application/json;charset=UTF-8
196
+ Transfer-Encoding:
197
+ - chunked
198
+ Connection:
199
+ - close
200
+ Permissions-Policy:
201
+ - interest-cohort=(),browsing-topics=()
202
+ Cf-Cache-Status:
203
+ - DYNAMIC
204
+ Report-To:
205
+ - '{"endpoints":[{"url":"https:\/\/a.nel.cloudflare.com\/report\/v3?s=RrbNFJWRQBXS6y931anATogZWNo7ADstfMIWWGyJt4uCgzcwDmHJIhmD5B1GBcxVumtrIgR9UvQAjAeHSegjECYTKV0iXFmlEs8inqORNU%2FJmkVjHv%2F1qos%2B8I1Hh18J671MWWM%3D"}],"group":"cf-nel","max_age":604800}'
206
+ Nel:
207
+ - '{"success_fraction":0,"report_to":"cf-nel","max_age":604800}'
208
+ Strict-Transport-Security:
209
+ - max-age=31536000; includeSubDomains; preload
210
+ Server:
211
+ - cloudflare
212
+ Cf-Ray:
213
+ - 7a6f6e2b9c22b906-AMS
214
+ Alt-Svc:
215
+ - h3=":443"; ma=86400, h3-29=":443"; ma=86400
216
+ body:
217
+ encoding: UTF-8
218
+ string: |-
219
+ [
220
+ {
221
+ "DOI": "10.1101",
222
+ "RA": "Crossref"
223
+ }
224
+ ]
225
+ recorded_at: Sun, 12 Mar 2023 22:21:28 GMT
226
+ - request:
227
+ method: get
228
+ uri: https://api.crossref.org/members/246
229
+ body:
230
+ encoding: UTF-8
231
+ string: ''
232
+ headers:
233
+ Connection:
234
+ - close
235
+ Host:
236
+ - api.crossref.org
237
+ User-Agent:
238
+ - http.rb/5.1.1
239
+ response:
240
+ status:
241
+ code: 200
242
+ message: OK
243
+ headers:
244
+ Date:
245
+ - Wed, 15 Mar 2023 21:15:14 GMT
246
+ Content-Type:
247
+ - application/json
248
+ Transfer-Encoding:
249
+ - chunked
250
+ Access-Control-Expose-Headers:
251
+ - Link
252
+ Access-Control-Allow-Headers:
253
+ - X-Requested-With, Accept, Accept-Encoding, Accept-Charset, Accept-Language,
254
+ Accept-Ranges, Cache-Control
255
+ Access-Control-Allow-Origin:
256
+ - "*"
257
+ Server:
258
+ - Jetty(9.4.40.v20210413)
259
+ X-Ratelimit-Limit:
260
+ - '50'
261
+ X-Ratelimit-Interval:
262
+ - 1s
263
+ X-Api-Pool:
264
+ - public
265
+ X-Rate-Limit-Limit:
266
+ - '50'
267
+ X-Rate-Limit-Interval:
268
+ - 1s
269
+ Permissions-Policy:
270
+ - interest-cohort=()
271
+ Connection:
272
+ - close
273
+ body:
274
+ encoding: UTF-8
275
+ string: '{"status":"ok","message-type":"member","message-version":"1.0.0","message":{"last-status-check-time":1678836305645,"primary-name":"Cold
276
+ Spring Harbor Laboratory","counts":{"current-dois":106911,"backfile-dois":160223,"total-dois":267134},"breakdowns":{"dois-by-issued-year":[[2020,53638],[2021,50443],[2022,46893],[2019,31261],[2018,22041],[2017,12746],[2023,9575],[2016,6114],[2006,3590],[2015,3299],[2014,2295],[2009,1926],[2007,1796],[2010,1753],[2008,1646],[2013,1450],[2011,1418],[2012,1356],[2004,949],[2003,872],[2005,861],[2001,801],[2002,781],[2000,774],[1999,714],[1998,707],[1997,515],[1996,504],[1995,448],[1994,441],[1993,389],[1992,364],[1991,336],[1990,304],[1989,304],[1988,283],[1974,235],[1983,228],[1987,227],[1979,154],[1980,143],[1986,129],[1978,122],[1981,117],[1985,107],[1970,101],[1977,98],[1968,97],[1984,95],[1982,95],[1969,94],[1966,94],[1973,84],[1963,79],[1972,74],[1967,72],[1950,63],[1976,62],[1965,60],[1960,53],[1964,50],[1962,49],[1961,48],[1937,43],[1953,42],[1957,39],[1958,38],[1951,37],[1938,37],[1935,37],[1936,36],[1955,34],[1941,34],[1939,34],[1934,32],[1956,31],[1954,29],[1946,29],[1933,29],[1959,28],[1952,28],[1940,28],[1948,27],[1947,27],[1942,18]]},"prefixes":["10.1261","10.1110","10.1101","10.14224"],"coverage":{"affiliations-current":0.0,"similarity-checking-current":1.0,"descriptions-current":0.0,"ror-ids-current":0.0,"funders-backfile":0.02186327805620916,"licenses-backfile":6.86543130511849E-5,"funders-current":0.007623163191813752,"affiliations-backfile":6.241301186471356E-6,"resource-links-backfile":6.241301186471356E-6,"orcids-backfile":0.5046092009262091,"update-policies-current":0.0,"ror-ids-backfile":0.0,"orcids-current":0.7910972678208978,"similarity-checking-backfile":0.9900451246075782,"references-backfile":0.8710859239934342,"descriptions-backfile":0.0,"award-numbers-backfile":0.02004081810975952,"update-policies-backfile":0.0,"licenses-current":0.0,"award-numbers-current":0.007033888000299314,"abstracts-backfile":0.8899783426848829,"resource-links-current":0.0,"abstracts-current":0.995547698553002,"references-current":0.9825275228928735},"prefix":[{"name":"Cold
277
+ Spring Harbor Laboratory","value":"10.1261"},{"name":"","value":"10.1110"},{"name":"Cold
278
+ Spring Harbor Laboratory","value":"10.1101"},{"name":"Cold Spring Harbor Laboratory
279
+ - CSHL Library & Archives","value":"10.14224"}],"id":246,"tokens":["cold","spring","harbor","laboratory"],"counts-type":{"all":{"report":20,"journal-article":39420,"journal":8,"posted-content":227692,"journal-issue":2},"backfile":{"report":20,"journal-article":37729,"posted-content":122472,"journal-issue":2},"current":{"journal-article":1691,"posted-content":105220}},"coverage-type":{"all":{"report":{"last-status-check-time":1678836305645,"affiliations":0.0,"abstracts":0.0,"orcids":0.35,"licenses":0.0,"references":0.0,"funders":0.0,"similarity-checking":0.1,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1678836305645,"affiliations":2.536783358701167E-5,"abstracts":0.5463723997970573,"orcids":0.05849822425164891,"licenses":2.790461694571284E-4,"references":0.6114155251141553,"funders":0.1095383054287164,"similarity-checking":0.9600456621004566,"award-numbers":0.1005327245053272,"ror-ids":0.0,"update-policies":0.0,"resource-links":2.536783358701167E-5,"descriptions":0.0},"journal":{"last-status-check-time":1678836305645,"affiliations":0.0,"abstracts":0.0,"orcids":0.0,"licenses":0.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"posted-content":{"last-status-check-time":1678836305645,"affiliations":0.0,"abstracts":0.9991216204346222,"orcids":0.716380022135165,"licenses":0.0,"references":0.9684529979094566,"funders":0.0,"similarity-checking":1.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-issue":{"last-status-check-time":1678836305645,"affiliations":0.0,"abstracts":0.0,"orcids":0.0,"licenses":0.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0}},"backfile":{"report":{"last-status-check-time":1678836305645,"affiliations":0.0,"abstracts":0.0,"orcids":0.35,"licenses":0.0,"references":0.0,"funders":0.0,"similarity-checking":0.1,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1678836305645,"affiliations":2.65048106231281E-5,"abstracts":0.538392218187601,"orcids":0.03750430703172626,"licenses":2.915529168544091E-4,"references":0.6052373505791301,"funders":0.09284635161281773,"similarity-checking":0.9582549232685732,"award-numbers":0.08510694691086432,"ror-ids":0.0,"update-policies":0.0,"resource-links":2.65048106231281E-5,"descriptions":0.0},"posted-content":{"last-status-check-time":1678836305645,"affiliations":0.0,"abstracts":0.998448624991835,"orcids":0.6485400744660004,"licenses":0.0,"references":0.9531403096217911,"funders":0.0,"similarity-checking":1.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-issue":{"last-status-check-time":1678836305645,"affiliations":0.0,"abstracts":0.0,"orcids":0.0,"licenses":0.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0}},"current":{"journal-article":{"last-status-check-time":1678836305645,"affiliations":0.0,"abstracts":0.7244234180958014,"orcids":0.5269071555292726,"licenses":0.0,"references":0.7492607924305145,"funders":0.4819633353045535,"similarity-checking":1.0,"award-numbers":0.4447072738024837,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"posted-content":{"last-status-check-time":1678836305645,"affiliations":0.0,"abstracts":0.9999049610340239,"orcids":0.7953430906671735,"licenses":0.0,"references":0.9862763733130584,"funders":0.0,"similarity-checking":1.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0}}},"flags":{"deposits-abstracts-current":true,"deposits-orcids-current":true,"deposits":true,"deposits-affiliations-backfile":true,"deposits-update-policies-backfile":false,"deposits-similarity-checking-backfile":true,"deposits-award-numbers-current":true,"deposits-resource-links-current":false,"deposits-ror-ids-current":false,"deposits-articles":true,"deposits-affiliations-current":false,"deposits-funders-current":true,"deposits-references-backfile":true,"deposits-ror-ids-backfile":false,"deposits-abstracts-backfile":true,"deposits-licenses-backfile":true,"deposits-award-numbers-backfile":true,"deposits-descriptions-current":false,"deposits-references-current":true,"deposits-resource-links-backfile":true,"deposits-descriptions-backfile":false,"deposits-orcids-backfile":true,"deposits-funders-backfile":true,"deposits-update-policies-current":false,"deposits-similarity-checking-current":true,"deposits-licenses-current":false},"location":"Woodbury,
280
+ NY, United States","names":["Cold Spring Harbor Laboratory","","Cold Spring
281
+ Harbor Laboratory - CSHL Library & Archives"]}}'
282
+ recorded_at: Wed, 15 Mar 2023 21:15:14 GMT
283
+ recorded_with: VCR 6.1.0
@@ -0,0 +1,123 @@
1
+ ---
2
+ http_interactions:
3
+ - request:
4
+ method: get
5
+ uri: https://donnywinston.com/posts/implementing-the-fair-principles-through-fair-enabling-artifacts-and-services
6
+ body:
7
+ encoding: UTF-8
8
+ string: ''
9
+ headers:
10
+ Connection:
11
+ - close
12
+ Host:
13
+ - donnywinston.com
14
+ User-Agent:
15
+ - http.rb/5.1.1
16
+ response:
17
+ status:
18
+ code: 301
19
+ message: Moved Permanently
20
+ headers:
21
+ Age:
22
+ - '0'
23
+ Cache-Control:
24
+ - public, max-age=0, must-revalidate
25
+ Content-Length:
26
+ - '17088'
27
+ Content-Type:
28
+ - text/html; charset=UTF-8
29
+ Date:
30
+ - Sun, 12 Mar 2023 22:21:27 GMT
31
+ Etag:
32
+ - '"c29965807caee28e6477b9844cedd90f-ssl"'
33
+ Location:
34
+ - "/posts/implementing-the-fair-principles-through-fair-enabling-artifacts-and-services/"
35
+ Server:
36
+ - Netlify
37
+ Strict-Transport-Security:
38
+ - max-age=31536000
39
+ X-Nf-Request-Id:
40
+ - 01GVBYM4M28PM2G7H8D95AHHXF
41
+ Connection:
42
+ - close
43
+ body:
44
+ encoding: UTF-8
45
+ string: |-
46
+ <!doctype html><html lang=en-us><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="IE=edge,chrome=1"><meta name=viewport content="width=device-width,initial-scale=1"><meta name=format-detection content="telephone=no"><title>Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services | Donny Winston</title><script type=application/ld+json>{"@context":{"@vocab":"https://schema.org/","dcterms":"http://purl.org/dc/terms/"},"@type":"BlogPosting","author":[{"@type":"Person","name":"Donny Winston","image":{"@type":"ImageObject","url":"https://www.gravatar.com/avatar/7fd9c14251809462e5f9cee070cf881d?s=250&r=x&d=mp","width":250,"height":250},"url":"https://donnywinston.com","identifier":"https://orcid.org/0000-0002-8424-0604","sameAs":["https://twitter.com/donnywinston","https://www.linkedin.com/in/donnywinston/"]}],"publisher":{"@type":"Organization","name":"Polyneme LLC","url":"https://www.polyneme.xyz","logo":{"@type":"ImageObject","url":"https://polyneme.xyz/icons/icon-96x96.png","width":60,"height":60}},"headline":"Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services","url":"https:\/\/donnywinston.com\/posts\/implementing-the-fair-principles-through-fair-enabling-artifacts-and-services\/","datePublished":"2022-10-21 13:24:46 -0400 -0400","dateModified":"2022-10-21 13:24:46 -0400 -0400","keywords":[],"@id":"https://doi.org/10.57099/11h5yt3819","name":"Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services","educationalLevel":"Beginner","description":"How does a Research Software Engineer (RSE) — often responsible for developing infrastructure to manage and share digital research objects (data, models, code, notebooks, workflows, etc.","competencyRequired":[],"teaches":[],"abstract":"How does a Research Software Engineer (RSE) — often responsible for developing infrastructure to manage and share digital research objects (data, models, code, notebooks, workflows, etc.","about":[{"@type":"DefinedTerm","@id":"http://edamontology.org/data_3669","inDefinedTermSet":"http://edamontology.org","termCode":"data_3670","name":"Training material","url":"http://edamontology.org/data_3669"},{"@type":"DefinedTerm","@id":"http://edamontology.org/topic_0605","inDefinedTermSet":"http://edamontology.org","termCode":"topic_0605","name":"Informatics","alternate_name":["Information science","Knowledge management","Information management"],"description":"The study and practice of information processing and use of computer information systems.","url":"http://edamontology.org/data_3669"}],"audience":{"@type":"Audience","audienceType":"People interested in publishing their research output"},"identifier":"https://n2t.net/ark:57802/dw0/blog/\/posts\/implementing-the-fair-principles-through-fair-enabling-artifacts-and-services\/","inLanguage":["en-US"],"learningResourceType":["blogpost"],"license":["https://creativecommons.org/licenses/by/4.0/"],"timeRequired":"PT10M","creativeWorkStatus":"Active","dateCreated":"2022-10-21 13:24:46 -0400 -0400","version":"1"}</script><link rel=apple-touch-icon sizes=180x180 href=/apple-touch-icon.png><link rel=icon type=image/png sizes=32x32 href=/favicon-32x32.png><link rel=icon type=image/png sizes=16x16 href=/favicon-16x16.png><link rel=manifest href=/manifest.json><link rel=mask-icon href=/safari-pinned-tab.svg color=#ff3db4><meta name=theme-color content="#ffffff"><link rel=me href=https://fairpoints.social/@donny><link rel=stylesheet href=https://donnywinston.com/css/main.min.b9c692d7b890e6a24e0280548d2a8519d6f71fa047a6c9fac701d2de45896323.css><link rel=stylesheet href=https://donnywinston.com/css/custom.min.817b30e0146652a7e9e48e1ca44f82117b0e69dca0b10ac258150d1c6f325fcd.css></head><body><nav><header><div class=site-title><a href=/>Donny Winston</a></div></header><div class=nav-menu><a class="color-link nav-link" href=/about/>About</a>
47
+ <a class="color-link nav-link" href=/consulting/>Consulting</a>
48
+ <a class="color-link nav-link" href=/archives/>Archives</a>
49
+ <a class="color-link nav-link" href=https://donnywinston.com/index.xml target=_blank rel=noopener type=application/rss+xml>RSS</a></div><footer class=footer><div class=social-icons><a class=social-icon href=https://orcid.org/0000-0002-8424-0604 target=_blank rel=noopener title=Orcid><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M27 14c0 7.1804687-5.8195313 13-13 13C6.81953125 27 1 21.1804687 1 14 1 6.81953125 6.81953125 1 14 1c7.1804687.0 13 5.81953125 13 13zM9.76484375 19.9109375V13.9492188 9.03359375H8.20078125V19.9109375h1.5640625zM12.0601563 9.03359375V19.9210938h4.2453125c3.5851562.0 5.76875-2.6507813 5.76875-5.4437501.0-2.5695312-1.7671875-5.44374995-5.7890625-5.44374995h-4.225zM13.6242188 18.509375V10.4453125H16.03125c3.046875.0 4.4382813 1.8484375 4.4382813 4.0320312.0 1.3406251-.8125 4.0320313-4.3570313 4.0320313H13.6242188zM10.0085938 6.76875c0-.55859375-.457031300000001-1.02578125-1.0257813-1.02578125S7.95703125 6.2 7.95703125 6.76875c0 .55859375.45703125 1.02578125 1.02578125 1.02578125S10.0085938 7.32734375 10.0085938 6.76875z"/></svg></a><a class=social-icon href=https://fairpoints.social/@donny target=_blank rel="noopener rel" title=Mastodon><svg xmlns="http://www.w3.org/2000/svg" width="28" height="28" viewBox="0 0 418 512" fill="currentcolor" stroke="currentcolor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><path d="M433 179.11c0-97.2-63.71-125.7-63.71-125.7-62.52-28.7-228.56-28.4-290.48.0.0.0-63.72 28.5-63.72 125.7.0 115.7-6.6 259.4 105.63 289.1 40.51 10.7 75.32 13 103.33 11.4 50.81-2.8 79.32-18.1 79.32-18.1l-1.7-36.9s-36.31 11.4-77.12 10.1c-40.41-1.4-83-4.4-89.63-54a102.54 102.54.0 01-.9-13.9c85.63 20.9 158.65 9.1 178.75 6.7 56.12-6.7 105-41.3 111.23-72.9 9.8-49.8 9-121.5 9-121.5zm-75.12 125.2h-46.63v-114.2c0-49.7-64-51.6-64 6.9v62.5h-46.33V197c0-58.5-64-56.6-64-6.9v114.2H90.19c0-122.1-5.2-147.9 18.41-175 25.9-28.9 79.82-30.8 103.83 6.1l11.6 19.5 11.6-19.5c24.11-37.1 78.12-34.8 103.83-6.1 23.71 27.3 18.4 53 18.4 175z"/></svg></a><a class=social-icon href=https://www.linkedin.com/in/donnywinston/ target=_blank rel=noopener title=LinkedIn><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M2 3.654102c0-.95502059.79442509-1.73012354 1.77383592-1.73012354H24.2261641C25.2058917 1.92397846 26 2.69908141 26 3.654102V24.3462148C26 25.3015521 25.2058917 26.0760215 24.2261641 26.0760215H3.77383592C2.79442509 26.0760215 2 25.3015521 2 24.3465315V3.65378524 3.654102zM9.27526132 22.1415901V11.2356668H5.65030092V22.1415901H9.27557808 9.27526132zM7.46341463 9.74691162c1.2638581.0 2.05068103-.83750395 2.05068103-1.88406715C9.49033893 6.79252455 8.72727273 5.97846056 7.48748812 5.97846056c-1.24073487.0-2.05099778.81406399-2.05099778 1.88438391.0 1.0465632.78650618 1.88406715 2.00316756 1.88406715h.02343998H7.46341463zM11.2815965 22.1415901h3.6246436v-6.089642C14.9062401 15.7263225 14.9299968 15.4000634 15.0256573 15.1675641c.261957499999999-.6515679.8584099-1.3259423 1.8599936-1.3259423 1.3113716.0 1.836237 1 1.836237 2.4662654v5.8337029h3.6246436V15.8885017c0-3.349699-1.7880899-4.9084574-4.172949-4.9084574-1.9553373.0-2.814064 1.0928097-3.2910991 1.8371872H14.9065569v-1.581248H11.2819132C11.3291099 12.2591067 11.2815965 22.1419069 11.2815965 22.1419069V22.1415901z"/></svg></a><a class=social-icon href=https://github.com/dwinston/ target=_blank rel=noopener title=GitHub><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M13.9988029 1.32087331C6.82105037 1.32087331 1 7.14112562 1 14.3212723c0 5.7436386 3.72454649 10.6157955 8.89038951 12.3348169C10.5408085 26.7757983 10.7778323 26.374374 10.7778323 26.0296121 10.7778323 25.7215609 10.7666595 24.9035493 10.760275 23.8189856 7.14426471 24.6042767 6.38131925 22.0760223 6.38131925 22.0760223c-.59136253-1.5019491-1.44369072-1.9017772-1.44369072-1.9017772C3.75729765 19.3682044 5.02701126 19.3841656 5.02701126 19.3841656 6.33183953 19.4759425 7.01817121 20.7241085 7.01817121 20.7241085c1.15958133 1.9863716 3.04300319 1.4125664 3.78360289 1.0797753.1181129-.8395592.4540962-1.4125663.8251942-1.7373768C8.74038491 19.7385043 5.70536235 18.6228163 5.70536235 13.6413251c0-1.4189508.50676816-2.5801283 1.33834679-3.4883207C6.90963504 9.82420367 6.46351945 8.50181809 7.17139875 6.71256734c0 0 1.09094816-.34955032 3.57451115 1.33276037C11.78259 7.75642995 12.8950858 7.61277914 14.000399 7.60719272 15.1049142 7.61277914 16.2166119 7.75642995 17.2548881 8.04532771c2.4819669-1.68231069 3.571319-1.33276037 3.571319-1.33276037C21.5356825 8.50181809 21.0895669 9.82420367 20.9562909 10.1530044 21.7894656 11.0611968 22.2922435 12.2223743 22.2922435 13.6413251c0 4.9942601-3.039811 6.0931889-5.935173 6.4148071.4660671.401424200000001.8818564 1.194696.8818564 2.4077473C17.2389269 24.2012564 17.2229657 25.603448 17.2229657 26.0296121 17.2229657 26.3775663 17.4575954 26.7821827 18.116793 26.6552912 23.2786458 24.9322794 27 20.0633148 27 14.3212723 27 7.14112562 21.1789496 1.32087331 13.9988029 1.32087331"/></svg></a></div><div class=hugo-attrib><p><a href=https://github.com/kimcc/hugo-theme-noteworthy target=_blank rel=noopener>Noteworthy theme</a></p><p><a href=https://gohugo.io target=_blank rel=noopener>Built with Hugo</a></p></div><script src=https://donnywinston.com/js/main.min.a7205ef73b078c8daed6fe1b0826e8ba229ffabbb69d299d9446cf41f2c7d8aa.js integrity="sha256-pyBe9zsHjI2u1v4bCCbouiKf+ru2nSmdlEbPQfLH2Ko=" crossorigin=anonymous></script></footer></nav><div id=content class=content-container><h1 class=post-title>Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services</h1><time>October 21, 2022</time><div><p><p>How does a <a href=https://researchsoftware.org/>Research Software Engineer (RSE)</a> — often
50
+ responsible for developing infrastructure to manage and share digital research objects (data,
51
+ models, code, notebooks, workflows, etc.) — get from &ldquo;Yes, FAIR sounds great, but how?&rdquo; to &ldquo;I better
52
+ understand what the FAIR principles really mean and how I can put them into practice.&rdquo;? I hope the
53
+ diagram below can help.</p><figure><a href=/fair-enabling-resources-services-principles-diagram.pdf><img src=/img/fair-enabling-resources-services-principles-diagram-nocaption.svg width=100%></a><figcaption>Relating
54
+ <a href=https://w3id.org/fair/fip/terms/FAIR-Enabling-Resource>FAIR-Enabling Resource</a>
55
+ <strong>artifacts</strong>, from the
56
+ <a href=https://w3id.org/fair/fip/terms/FIP-Ontology>FAIR Implementation Profile (FIP) ontology</a>,
57
+ to <strong>services</strong>.
58
+ These services are what you deploy to implement each of the 15
59
+ <a href=https://w3id.org/fair/principles/terms/FAIR>FAIR Principles</a>
60
+ (from Box 2 of the <a href=https://doi.org/10.1038/sdata.2016.18>seminal publication</a>)
61
+ for any actual given digital research object.</figcaption></figure></p></div><div class=page-footer></div><link rel=stylesheet type=text/css href=/css/katex.min.css crossorigin=anonymous><script type=text/javascript src=/js/katex.min.js crossorigin=anonymous></script>
62
+ <script type=text/javascript src=/js/auto-render.min.js onload=renderMathInElement(document.body) crossorigin=anonymous></script></div><footer class=footer-mobile><div class=social-icons><a class=social-icon href=https://orcid.org/0000-0002-8424-0604 target=_blank rel=noopener title=Orcid><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M27 14c0 7.1804687-5.8195313 13-13 13C6.81953125 27 1 21.1804687 1 14 1 6.81953125 6.81953125 1 14 1c7.1804687.0 13 5.81953125 13 13zM9.76484375 19.9109375V13.9492188 9.03359375H8.20078125V19.9109375h1.5640625zM12.0601563 9.03359375V19.9210938h4.2453125c3.5851562.0 5.76875-2.6507813 5.76875-5.4437501.0-2.5695312-1.7671875-5.44374995-5.7890625-5.44374995h-4.225zM13.6242188 18.509375V10.4453125H16.03125c3.046875.0 4.4382813 1.8484375 4.4382813 4.0320312.0 1.3406251-.8125 4.0320313-4.3570313 4.0320313H13.6242188zM10.0085938 6.76875c0-.55859375-.457031300000001-1.02578125-1.0257813-1.02578125S7.95703125 6.2 7.95703125 6.76875c0 .55859375.45703125 1.02578125 1.02578125 1.02578125S10.0085938 7.32734375 10.0085938 6.76875z"/></svg></a><a class=social-icon href=https://fairpoints.social/@donny target=_blank rel="noopener rel" title=Mastodon><svg xmlns="http://www.w3.org/2000/svg" width="28" height="28" viewBox="0 0 418 512" fill="currentcolor" stroke="currentcolor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><path d="M433 179.11c0-97.2-63.71-125.7-63.71-125.7-62.52-28.7-228.56-28.4-290.48.0.0.0-63.72 28.5-63.72 125.7.0 115.7-6.6 259.4 105.63 289.1 40.51 10.7 75.32 13 103.33 11.4 50.81-2.8 79.32-18.1 79.32-18.1l-1.7-36.9s-36.31 11.4-77.12 10.1c-40.41-1.4-83-4.4-89.63-54a102.54 102.54.0 01-.9-13.9c85.63 20.9 158.65 9.1 178.75 6.7 56.12-6.7 105-41.3 111.23-72.9 9.8-49.8 9-121.5 9-121.5zm-75.12 125.2h-46.63v-114.2c0-49.7-64-51.6-64 6.9v62.5h-46.33V197c0-58.5-64-56.6-64-6.9v114.2H90.19c0-122.1-5.2-147.9 18.41-175 25.9-28.9 79.82-30.8 103.83 6.1l11.6 19.5 11.6-19.5c24.11-37.1 78.12-34.8 103.83-6.1 23.71 27.3 18.4 53 18.4 175z"/></svg></a><a class=social-icon href=https://www.linkedin.com/in/donnywinston/ target=_blank rel=noopener title=LinkedIn><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M2 3.654102c0-.95502059.79442509-1.73012354 1.77383592-1.73012354H24.2261641C25.2058917 1.92397846 26 2.69908141 26 3.654102V24.3462148C26 25.3015521 25.2058917 26.0760215 24.2261641 26.0760215H3.77383592C2.79442509 26.0760215 2 25.3015521 2 24.3465315V3.65378524 3.654102zM9.27526132 22.1415901V11.2356668H5.65030092V22.1415901H9.27557808 9.27526132zM7.46341463 9.74691162c1.2638581.0 2.05068103-.83750395 2.05068103-1.88406715C9.49033893 6.79252455 8.72727273 5.97846056 7.48748812 5.97846056c-1.24073487.0-2.05099778.81406399-2.05099778 1.88438391.0 1.0465632.78650618 1.88406715 2.00316756 1.88406715h.02343998H7.46341463zM11.2815965 22.1415901h3.6246436v-6.089642C14.9062401 15.7263225 14.9299968 15.4000634 15.0256573 15.1675641c.261957499999999-.6515679.8584099-1.3259423 1.8599936-1.3259423 1.3113716.0 1.836237 1 1.836237 2.4662654v5.8337029h3.6246436V15.8885017c0-3.349699-1.7880899-4.9084574-4.172949-4.9084574-1.9553373.0-2.814064 1.0928097-3.2910991 1.8371872H14.9065569v-1.581248H11.2819132C11.3291099 12.2591067 11.2815965 22.1419069 11.2815965 22.1419069V22.1415901z"/></svg></a><a class=social-icon href=https://github.com/dwinston/ target=_blank rel=noopener title=GitHub><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M13.9988029 1.32087331C6.82105037 1.32087331 1 7.14112562 1 14.3212723c0 5.7436386 3.72454649 10.6157955 8.89038951 12.3348169C10.5408085 26.7757983 10.7778323 26.374374 10.7778323 26.0296121 10.7778323 25.7215609 10.7666595 24.9035493 10.760275 23.8189856 7.14426471 24.6042767 6.38131925 22.0760223 6.38131925 22.0760223c-.59136253-1.5019491-1.44369072-1.9017772-1.44369072-1.9017772C3.75729765 19.3682044 5.02701126 19.3841656 5.02701126 19.3841656 6.33183953 19.4759425 7.01817121 20.7241085 7.01817121 20.7241085c1.15958133 1.9863716 3.04300319 1.4125664 3.78360289 1.0797753.1181129-.8395592.4540962-1.4125663.8251942-1.7373768C8.74038491 19.7385043 5.70536235 18.6228163 5.70536235 13.6413251c0-1.4189508.50676816-2.5801283 1.33834679-3.4883207C6.90963504 9.82420367 6.46351945 8.50181809 7.17139875 6.71256734c0 0 1.09094816-.34955032 3.57451115 1.33276037C11.78259 7.75642995 12.8950858 7.61277914 14.000399 7.60719272 15.1049142 7.61277914 16.2166119 7.75642995 17.2548881 8.04532771c2.4819669-1.68231069 3.571319-1.33276037 3.571319-1.33276037C21.5356825 8.50181809 21.0895669 9.82420367 20.9562909 10.1530044 21.7894656 11.0611968 22.2922435 12.2223743 22.2922435 13.6413251c0 4.9942601-3.039811 6.0931889-5.935173 6.4148071.4660671.401424200000001.8818564 1.194696.8818564 2.4077473C17.2389269 24.2012564 17.2229657 25.603448 17.2229657 26.0296121 17.2229657 26.3775663 17.4575954 26.7821827 18.116793 26.6552912 23.2786458 24.9322794 27 20.0633148 27 14.3212723 27 7.14112562 21.1789496 1.32087331 13.9988029 1.32087331"/></svg></a></div><div class=footer-mobile-links><div class=hugo-attrib><p><a href=https://github.com/kimcc/hugo-theme-noteworthy target=_blank rel=noopener>Noteworthy theme</a></p><span class=divider-bar>|</span><p><a href=https://gohugo.io target=_blank rel=noopener>Built with Hugo</a></p></div></div><script src=https://donnywinston.com/js/main.min.a7205ef73b078c8daed6fe1b0826e8ba229ffabbb69d299d9446cf41f2c7d8aa.js integrity="sha256-pyBe9zsHjI2u1v4bCCbouiKf+ru2nSmdlEbPQfLH2Ko=" crossorigin=anonymous></script></footer></body></html>
63
+ recorded_at: Sun, 12 Mar 2023 22:21:27 GMT
64
+ - request:
65
+ method: get
66
+ uri: https://donnywinston.com/posts/implementing-the-fair-principles-through-fair-enabling-artifacts-and-services/
67
+ body:
68
+ encoding: UTF-8
69
+ string: ''
70
+ headers:
71
+ Connection:
72
+ - close
73
+ User-Agent:
74
+ - http.rb/5.1.1
75
+ Host:
76
+ - donnywinston.com
77
+ response:
78
+ status:
79
+ code: 200
80
+ message: OK
81
+ headers:
82
+ Age:
83
+ - '0'
84
+ Cache-Control:
85
+ - public, max-age=0, must-revalidate
86
+ Content-Length:
87
+ - '17088'
88
+ Content-Type:
89
+ - text/html; charset=UTF-8
90
+ Date:
91
+ - Tue, 14 Mar 2023 12:43:38 GMT
92
+ Etag:
93
+ - '"c29965807caee28e6477b9844cedd90f-ssl"'
94
+ Server:
95
+ - Netlify
96
+ Strict-Transport-Security:
97
+ - max-age=31536000
98
+ X-Nf-Request-Id:
99
+ - 01GVG2BJC93PPJMGM36QJ7JQFR
100
+ Connection:
101
+ - close
102
+ body:
103
+ encoding: UTF-8
104
+ string: |-
105
+ <!doctype html><html lang=en-us><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="IE=edge,chrome=1"><meta name=viewport content="width=device-width,initial-scale=1"><meta name=format-detection content="telephone=no"><title>Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services | Donny Winston</title><script type=application/ld+json>{"@context":{"@vocab":"https://schema.org/","dcterms":"http://purl.org/dc/terms/"},"@type":"BlogPosting","author":[{"@type":"Person","name":"Donny Winston","image":{"@type":"ImageObject","url":"https://www.gravatar.com/avatar/7fd9c14251809462e5f9cee070cf881d?s=250&r=x&d=mp","width":250,"height":250},"url":"https://donnywinston.com","identifier":"https://orcid.org/0000-0002-8424-0604","sameAs":["https://twitter.com/donnywinston","https://www.linkedin.com/in/donnywinston/"]}],"publisher":{"@type":"Organization","name":"Polyneme LLC","url":"https://www.polyneme.xyz","logo":{"@type":"ImageObject","url":"https://polyneme.xyz/icons/icon-96x96.png","width":60,"height":60}},"headline":"Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services","url":"https:\/\/donnywinston.com\/posts\/implementing-the-fair-principles-through-fair-enabling-artifacts-and-services\/","datePublished":"2022-10-21 13:24:46 -0400 -0400","dateModified":"2022-10-21 13:24:46 -0400 -0400","keywords":[],"@id":"https://doi.org/10.57099/11h5yt3819","name":"Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services","educationalLevel":"Beginner","description":"How does a Research Software Engineer (RSE) — often responsible for developing infrastructure to manage and share digital research objects (data, models, code, notebooks, workflows, etc.","competencyRequired":[],"teaches":[],"abstract":"How does a Research Software Engineer (RSE) — often responsible for developing infrastructure to manage and share digital research objects (data, models, code, notebooks, workflows, etc.","about":[{"@type":"DefinedTerm","@id":"http://edamontology.org/data_3669","inDefinedTermSet":"http://edamontology.org","termCode":"data_3670","name":"Training material","url":"http://edamontology.org/data_3669"},{"@type":"DefinedTerm","@id":"http://edamontology.org/topic_0605","inDefinedTermSet":"http://edamontology.org","termCode":"topic_0605","name":"Informatics","alternate_name":["Information science","Knowledge management","Information management"],"description":"The study and practice of information processing and use of computer information systems.","url":"http://edamontology.org/data_3669"}],"audience":{"@type":"Audience","audienceType":"People interested in publishing their research output"},"identifier":"https://n2t.net/ark:57802/dw0/blog/\/posts\/implementing-the-fair-principles-through-fair-enabling-artifacts-and-services\/","inLanguage":["en-US"],"learningResourceType":["blogpost"],"license":["https://creativecommons.org/licenses/by/4.0/"],"timeRequired":"PT10M","creativeWorkStatus":"Active","dateCreated":"2022-10-21 13:24:46 -0400 -0400","version":"1"}</script><link rel=apple-touch-icon sizes=180x180 href=/apple-touch-icon.png><link rel=icon type=image/png sizes=32x32 href=/favicon-32x32.png><link rel=icon type=image/png sizes=16x16 href=/favicon-16x16.png><link rel=manifest href=/manifest.json><link rel=mask-icon href=/safari-pinned-tab.svg color=#ff3db4><meta name=theme-color content="#ffffff"><link rel=me href=https://fairpoints.social/@donny><link rel=stylesheet href=https://donnywinston.com/css/main.min.b9c692d7b890e6a24e0280548d2a8519d6f71fa047a6c9fac701d2de45896323.css><link rel=stylesheet href=https://donnywinston.com/css/custom.min.817b30e0146652a7e9e48e1ca44f82117b0e69dca0b10ac258150d1c6f325fcd.css></head><body><nav><header><div class=site-title><a href=/>Donny Winston</a></div></header><div class=nav-menu><a class="color-link nav-link" href=/about/>About</a>
106
+ <a class="color-link nav-link" href=/consulting/>Consulting</a>
107
+ <a class="color-link nav-link" href=/archives/>Archives</a>
108
+ <a class="color-link nav-link" href=https://donnywinston.com/index.xml target=_blank rel=noopener type=application/rss+xml>RSS</a></div><footer class=footer><div class=social-icons><a class=social-icon href=https://orcid.org/0000-0002-8424-0604 target=_blank rel=noopener title=Orcid><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M27 14c0 7.1804687-5.8195313 13-13 13C6.81953125 27 1 21.1804687 1 14 1 6.81953125 6.81953125 1 14 1c7.1804687.0 13 5.81953125 13 13zM9.76484375 19.9109375V13.9492188 9.03359375H8.20078125V19.9109375h1.5640625zM12.0601563 9.03359375V19.9210938h4.2453125c3.5851562.0 5.76875-2.6507813 5.76875-5.4437501.0-2.5695312-1.7671875-5.44374995-5.7890625-5.44374995h-4.225zM13.6242188 18.509375V10.4453125H16.03125c3.046875.0 4.4382813 1.8484375 4.4382813 4.0320312.0 1.3406251-.8125 4.0320313-4.3570313 4.0320313H13.6242188zM10.0085938 6.76875c0-.55859375-.457031300000001-1.02578125-1.0257813-1.02578125S7.95703125 6.2 7.95703125 6.76875c0 .55859375.45703125 1.02578125 1.02578125 1.02578125S10.0085938 7.32734375 10.0085938 6.76875z"/></svg></a><a class=social-icon href=https://fairpoints.social/@donny target=_blank rel="noopener rel" title=Mastodon><svg xmlns="http://www.w3.org/2000/svg" width="28" height="28" viewBox="0 0 418 512" fill="currentcolor" stroke="currentcolor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><path d="M433 179.11c0-97.2-63.71-125.7-63.71-125.7-62.52-28.7-228.56-28.4-290.48.0.0.0-63.72 28.5-63.72 125.7.0 115.7-6.6 259.4 105.63 289.1 40.51 10.7 75.32 13 103.33 11.4 50.81-2.8 79.32-18.1 79.32-18.1l-1.7-36.9s-36.31 11.4-77.12 10.1c-40.41-1.4-83-4.4-89.63-54a102.54 102.54.0 01-.9-13.9c85.63 20.9 158.65 9.1 178.75 6.7 56.12-6.7 105-41.3 111.23-72.9 9.8-49.8 9-121.5 9-121.5zm-75.12 125.2h-46.63v-114.2c0-49.7-64-51.6-64 6.9v62.5h-46.33V197c0-58.5-64-56.6-64-6.9v114.2H90.19c0-122.1-5.2-147.9 18.41-175 25.9-28.9 79.82-30.8 103.83 6.1l11.6 19.5 11.6-19.5c24.11-37.1 78.12-34.8 103.83-6.1 23.71 27.3 18.4 53 18.4 175z"/></svg></a><a class=social-icon href=https://www.linkedin.com/in/donnywinston/ target=_blank rel=noopener title=LinkedIn><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M2 3.654102c0-.95502059.79442509-1.73012354 1.77383592-1.73012354H24.2261641C25.2058917 1.92397846 26 2.69908141 26 3.654102V24.3462148C26 25.3015521 25.2058917 26.0760215 24.2261641 26.0760215H3.77383592C2.79442509 26.0760215 2 25.3015521 2 24.3465315V3.65378524 3.654102zM9.27526132 22.1415901V11.2356668H5.65030092V22.1415901H9.27557808 9.27526132zM7.46341463 9.74691162c1.2638581.0 2.05068103-.83750395 2.05068103-1.88406715C9.49033893 6.79252455 8.72727273 5.97846056 7.48748812 5.97846056c-1.24073487.0-2.05099778.81406399-2.05099778 1.88438391.0 1.0465632.78650618 1.88406715 2.00316756 1.88406715h.02343998H7.46341463zM11.2815965 22.1415901h3.6246436v-6.089642C14.9062401 15.7263225 14.9299968 15.4000634 15.0256573 15.1675641c.261957499999999-.6515679.8584099-1.3259423 1.8599936-1.3259423 1.3113716.0 1.836237 1 1.836237 2.4662654v5.8337029h3.6246436V15.8885017c0-3.349699-1.7880899-4.9084574-4.172949-4.9084574-1.9553373.0-2.814064 1.0928097-3.2910991 1.8371872H14.9065569v-1.581248H11.2819132C11.3291099 12.2591067 11.2815965 22.1419069 11.2815965 22.1419069V22.1415901z"/></svg></a><a class=social-icon href=https://github.com/dwinston/ target=_blank rel=noopener title=GitHub><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M13.9988029 1.32087331C6.82105037 1.32087331 1 7.14112562 1 14.3212723c0 5.7436386 3.72454649 10.6157955 8.89038951 12.3348169C10.5408085 26.7757983 10.7778323 26.374374 10.7778323 26.0296121 10.7778323 25.7215609 10.7666595 24.9035493 10.760275 23.8189856 7.14426471 24.6042767 6.38131925 22.0760223 6.38131925 22.0760223c-.59136253-1.5019491-1.44369072-1.9017772-1.44369072-1.9017772C3.75729765 19.3682044 5.02701126 19.3841656 5.02701126 19.3841656 6.33183953 19.4759425 7.01817121 20.7241085 7.01817121 20.7241085c1.15958133 1.9863716 3.04300319 1.4125664 3.78360289 1.0797753.1181129-.8395592.4540962-1.4125663.8251942-1.7373768C8.74038491 19.7385043 5.70536235 18.6228163 5.70536235 13.6413251c0-1.4189508.50676816-2.5801283 1.33834679-3.4883207C6.90963504 9.82420367 6.46351945 8.50181809 7.17139875 6.71256734c0 0 1.09094816-.34955032 3.57451115 1.33276037C11.78259 7.75642995 12.8950858 7.61277914 14.000399 7.60719272 15.1049142 7.61277914 16.2166119 7.75642995 17.2548881 8.04532771c2.4819669-1.68231069 3.571319-1.33276037 3.571319-1.33276037C21.5356825 8.50181809 21.0895669 9.82420367 20.9562909 10.1530044 21.7894656 11.0611968 22.2922435 12.2223743 22.2922435 13.6413251c0 4.9942601-3.039811 6.0931889-5.935173 6.4148071.4660671.401424200000001.8818564 1.194696.8818564 2.4077473C17.2389269 24.2012564 17.2229657 25.603448 17.2229657 26.0296121 17.2229657 26.3775663 17.4575954 26.7821827 18.116793 26.6552912 23.2786458 24.9322794 27 20.0633148 27 14.3212723 27 7.14112562 21.1789496 1.32087331 13.9988029 1.32087331"/></svg></a></div><div class=hugo-attrib><p><a href=https://github.com/kimcc/hugo-theme-noteworthy target=_blank rel=noopener>Noteworthy theme</a></p><p><a href=https://gohugo.io target=_blank rel=noopener>Built with Hugo</a></p></div><script src=https://donnywinston.com/js/main.min.a7205ef73b078c8daed6fe1b0826e8ba229ffabbb69d299d9446cf41f2c7d8aa.js integrity="sha256-pyBe9zsHjI2u1v4bCCbouiKf+ru2nSmdlEbPQfLH2Ko=" crossorigin=anonymous></script></footer></nav><div id=content class=content-container><h1 class=post-title>Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services</h1><time>October 21, 2022</time><div><p><p>How does a <a href=https://researchsoftware.org/>Research Software Engineer (RSE)</a> — often
109
+ responsible for developing infrastructure to manage and share digital research objects (data,
110
+ models, code, notebooks, workflows, etc.) — get from &ldquo;Yes, FAIR sounds great, but how?&rdquo; to &ldquo;I better
111
+ understand what the FAIR principles really mean and how I can put them into practice.&rdquo;? I hope the
112
+ diagram below can help.</p><figure><a href=/fair-enabling-resources-services-principles-diagram.pdf><img src=/img/fair-enabling-resources-services-principles-diagram-nocaption.svg width=100%></a><figcaption>Relating
113
+ <a href=https://w3id.org/fair/fip/terms/FAIR-Enabling-Resource>FAIR-Enabling Resource</a>
114
+ <strong>artifacts</strong>, from the
115
+ <a href=https://w3id.org/fair/fip/terms/FIP-Ontology>FAIR Implementation Profile (FIP) ontology</a>,
116
+ to <strong>services</strong>.
117
+ These services are what you deploy to implement each of the 15
118
+ <a href=https://w3id.org/fair/principles/terms/FAIR>FAIR Principles</a>
119
+ (from Box 2 of the <a href=https://doi.org/10.1038/sdata.2016.18>seminal publication</a>)
120
+ for any actual given digital research object.</figcaption></figure></p></div><div class=page-footer></div><link rel=stylesheet type=text/css href=/css/katex.min.css crossorigin=anonymous><script type=text/javascript src=/js/katex.min.js crossorigin=anonymous></script>
121
+ <script type=text/javascript src=/js/auto-render.min.js onload=renderMathInElement(document.body) crossorigin=anonymous></script></div><footer class=footer-mobile><div class=social-icons><a class=social-icon href=https://orcid.org/0000-0002-8424-0604 target=_blank rel=noopener title=Orcid><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M27 14c0 7.1804687-5.8195313 13-13 13C6.81953125 27 1 21.1804687 1 14 1 6.81953125 6.81953125 1 14 1c7.1804687.0 13 5.81953125 13 13zM9.76484375 19.9109375V13.9492188 9.03359375H8.20078125V19.9109375h1.5640625zM12.0601563 9.03359375V19.9210938h4.2453125c3.5851562.0 5.76875-2.6507813 5.76875-5.4437501.0-2.5695312-1.7671875-5.44374995-5.7890625-5.44374995h-4.225zM13.6242188 18.509375V10.4453125H16.03125c3.046875.0 4.4382813 1.8484375 4.4382813 4.0320312.0 1.3406251-.8125 4.0320313-4.3570313 4.0320313H13.6242188zM10.0085938 6.76875c0-.55859375-.457031300000001-1.02578125-1.0257813-1.02578125S7.95703125 6.2 7.95703125 6.76875c0 .55859375.45703125 1.02578125 1.02578125 1.02578125S10.0085938 7.32734375 10.0085938 6.76875z"/></svg></a><a class=social-icon href=https://fairpoints.social/@donny target=_blank rel="noopener rel" title=Mastodon><svg xmlns="http://www.w3.org/2000/svg" width="28" height="28" viewBox="0 0 418 512" fill="currentcolor" stroke="currentcolor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><path d="M433 179.11c0-97.2-63.71-125.7-63.71-125.7-62.52-28.7-228.56-28.4-290.48.0.0.0-63.72 28.5-63.72 125.7.0 115.7-6.6 259.4 105.63 289.1 40.51 10.7 75.32 13 103.33 11.4 50.81-2.8 79.32-18.1 79.32-18.1l-1.7-36.9s-36.31 11.4-77.12 10.1c-40.41-1.4-83-4.4-89.63-54a102.54 102.54.0 01-.9-13.9c85.63 20.9 158.65 9.1 178.75 6.7 56.12-6.7 105-41.3 111.23-72.9 9.8-49.8 9-121.5 9-121.5zm-75.12 125.2h-46.63v-114.2c0-49.7-64-51.6-64 6.9v62.5h-46.33V197c0-58.5-64-56.6-64-6.9v114.2H90.19c0-122.1-5.2-147.9 18.41-175 25.9-28.9 79.82-30.8 103.83 6.1l11.6 19.5 11.6-19.5c24.11-37.1 78.12-34.8 103.83-6.1 23.71 27.3 18.4 53 18.4 175z"/></svg></a><a class=social-icon href=https://www.linkedin.com/in/donnywinston/ target=_blank rel=noopener title=LinkedIn><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M2 3.654102c0-.95502059.79442509-1.73012354 1.77383592-1.73012354H24.2261641C25.2058917 1.92397846 26 2.69908141 26 3.654102V24.3462148C26 25.3015521 25.2058917 26.0760215 24.2261641 26.0760215H3.77383592C2.79442509 26.0760215 2 25.3015521 2 24.3465315V3.65378524 3.654102zM9.27526132 22.1415901V11.2356668H5.65030092V22.1415901H9.27557808 9.27526132zM7.46341463 9.74691162c1.2638581.0 2.05068103-.83750395 2.05068103-1.88406715C9.49033893 6.79252455 8.72727273 5.97846056 7.48748812 5.97846056c-1.24073487.0-2.05099778.81406399-2.05099778 1.88438391.0 1.0465632.78650618 1.88406715 2.00316756 1.88406715h.02343998H7.46341463zM11.2815965 22.1415901h3.6246436v-6.089642C14.9062401 15.7263225 14.9299968 15.4000634 15.0256573 15.1675641c.261957499999999-.6515679.8584099-1.3259423 1.8599936-1.3259423 1.3113716.0 1.836237 1 1.836237 2.4662654v5.8337029h3.6246436V15.8885017c0-3.349699-1.7880899-4.9084574-4.172949-4.9084574-1.9553373.0-2.814064 1.0928097-3.2910991 1.8371872H14.9065569v-1.581248H11.2819132C11.3291099 12.2591067 11.2815965 22.1419069 11.2815965 22.1419069V22.1415901z"/></svg></a><a class=social-icon href=https://github.com/dwinston/ target=_blank rel=noopener title=GitHub><svg width="28" height="28" viewBox="0 0 28 28" fill="#ababab" xmlns="https://www.w3.org/2000/svg" xmlns:xlink="https://www.w3.org/1999/xlink"><path d="M13.9988029 1.32087331C6.82105037 1.32087331 1 7.14112562 1 14.3212723c0 5.7436386 3.72454649 10.6157955 8.89038951 12.3348169C10.5408085 26.7757983 10.7778323 26.374374 10.7778323 26.0296121 10.7778323 25.7215609 10.7666595 24.9035493 10.760275 23.8189856 7.14426471 24.6042767 6.38131925 22.0760223 6.38131925 22.0760223c-.59136253-1.5019491-1.44369072-1.9017772-1.44369072-1.9017772C3.75729765 19.3682044 5.02701126 19.3841656 5.02701126 19.3841656 6.33183953 19.4759425 7.01817121 20.7241085 7.01817121 20.7241085c1.15958133 1.9863716 3.04300319 1.4125664 3.78360289 1.0797753.1181129-.8395592.4540962-1.4125663.8251942-1.7373768C8.74038491 19.7385043 5.70536235 18.6228163 5.70536235 13.6413251c0-1.4189508.50676816-2.5801283 1.33834679-3.4883207C6.90963504 9.82420367 6.46351945 8.50181809 7.17139875 6.71256734c0 0 1.09094816-.34955032 3.57451115 1.33276037C11.78259 7.75642995 12.8950858 7.61277914 14.000399 7.60719272 15.1049142 7.61277914 16.2166119 7.75642995 17.2548881 8.04532771c2.4819669-1.68231069 3.571319-1.33276037 3.571319-1.33276037C21.5356825 8.50181809 21.0895669 9.82420367 20.9562909 10.1530044 21.7894656 11.0611968 22.2922435 12.2223743 22.2922435 13.6413251c0 4.9942601-3.039811 6.0931889-5.935173 6.4148071.4660671.401424200000001.8818564 1.194696.8818564 2.4077473C17.2389269 24.2012564 17.2229657 25.603448 17.2229657 26.0296121 17.2229657 26.3775663 17.4575954 26.7821827 18.116793 26.6552912 23.2786458 24.9322794 27 20.0633148 27 14.3212723 27 7.14112562 21.1789496 1.32087331 13.9988029 1.32087331"/></svg></a></div><div class=footer-mobile-links><div class=hugo-attrib><p><a href=https://github.com/kimcc/hugo-theme-noteworthy target=_blank rel=noopener>Noteworthy theme</a></p><span class=divider-bar>|</span><p><a href=https://gohugo.io target=_blank rel=noopener>Built with Hugo</a></p></div></div><script src=https://donnywinston.com/js/main.min.a7205ef73b078c8daed6fe1b0826e8ba229ffabbb69d299d9446cf41f2c7d8aa.js integrity="sha256-pyBe9zsHjI2u1v4bCCbouiKf+ru2nSmdlEbPQfLH2Ko=" crossorigin=anonymous></script></footer></body></html>
122
+ recorded_at: Tue, 14 Mar 2023 12:43:38 GMT
123
+ recorded_with: VCR 6.1.0