snappy 3.2__cp313-cp313-macosx_11_0_arm64.whl

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  1. snappy/CyOpenGL.cpython-313-darwin.so +0 -0
  2. snappy/SnapPy.cpython-313-darwin.so +0 -0
  3. snappy/SnapPy.ico +0 -0
  4. snappy/SnapPy.png +0 -0
  5. snappy/SnapPyHP.cpython-313-darwin.so +0 -0
  6. snappy/__init__.py +760 -0
  7. snappy/app.py +605 -0
  8. snappy/app_menus.py +372 -0
  9. snappy/browser.py +998 -0
  10. snappy/cache.py +25 -0
  11. snappy/canonical.py +249 -0
  12. snappy/cusps/__init__.py +38 -0
  13. snappy/cusps/cusp_area_matrix.py +101 -0
  14. snappy/cusps/cusp_areas_from_matrix.py +173 -0
  15. snappy/cusps/maximal_cusp_area_matrix.py +136 -0
  16. snappy/cusps/test.py +21 -0
  17. snappy/cusps/trig_cusp_area_matrix.py +63 -0
  18. snappy/database.py +454 -0
  19. snappy/db_utilities.py +79 -0
  20. snappy/decorated_isosig.py +710 -0
  21. snappy/dev/__init__.py +0 -0
  22. snappy/dev/extended_ptolemy/__init__.py +8 -0
  23. snappy/dev/extended_ptolemy/closed.py +106 -0
  24. snappy/dev/extended_ptolemy/complexVolumesClosed.py +149 -0
  25. snappy/dev/extended_ptolemy/direct.py +42 -0
  26. snappy/dev/extended_ptolemy/extended.py +406 -0
  27. snappy/dev/extended_ptolemy/giac_helper.py +43 -0
  28. snappy/dev/extended_ptolemy/giac_rur.py +129 -0
  29. snappy/dev/extended_ptolemy/gluing.py +46 -0
  30. snappy/dev/extended_ptolemy/phc_wrapper.py +220 -0
  31. snappy/dev/extended_ptolemy/printMatrices.py +70 -0
  32. snappy/dev/vericlosed/__init__.py +1 -0
  33. snappy/dev/vericlosed/computeApproxHyperbolicStructureNew.py +159 -0
  34. snappy/dev/vericlosed/computeApproxHyperbolicStructureOrb.py +90 -0
  35. snappy/dev/vericlosed/computeVerifiedHyperbolicStructure.py +111 -0
  36. snappy/dev/vericlosed/gimbalLoopFinder.py +130 -0
  37. snappy/dev/vericlosed/hyperbolicStructure.py +313 -0
  38. snappy/dev/vericlosed/krawczykCertifiedEdgeLengthsEngine.py +165 -0
  39. snappy/dev/vericlosed/oneVertexTruncatedComplex.py +122 -0
  40. snappy/dev/vericlosed/orb/__init__.py +1 -0
  41. snappy/dev/vericlosed/orb/orb_solution_for_snappea_finite_triangulation_mac +0 -0
  42. snappy/dev/vericlosed/parseVertexGramMatrixFile.py +47 -0
  43. snappy/dev/vericlosed/polishApproxHyperbolicStructure.py +61 -0
  44. snappy/dev/vericlosed/test.py +54 -0
  45. snappy/dev/vericlosed/truncatedComplex.py +176 -0
  46. snappy/dev/vericlosed/verificationError.py +58 -0
  47. snappy/dev/vericlosed/verifyHyperbolicStructureEngine.py +177 -0
  48. snappy/doc/_images/SnapPy-196.png +0 -0
  49. snappy/doc/_images/geodesics.jpg +0 -0
  50. snappy/doc/_images/m004_paper_plane_on_systole.jpg +0 -0
  51. snappy/doc/_images/m125_paper_plane.jpg +0 -0
  52. snappy/doc/_images/mac.png +0 -0
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  54. snappy/doc/_images/o9_00000_systole_paper_plane_closer.jpg +0 -0
  55. snappy/doc/_images/plink-action.png +0 -0
  56. snappy/doc/_images/ubuntu.png +0 -0
  57. snappy/doc/_images/win7.png +0 -0
  58. snappy/doc/_sources/additional_classes.rst.txt +40 -0
  59. snappy/doc/_sources/bugs.rst.txt +14 -0
  60. snappy/doc/_sources/censuses.rst.txt +51 -0
  61. snappy/doc/_sources/credits.rst.txt +75 -0
  62. snappy/doc/_sources/development.rst.txt +259 -0
  63. snappy/doc/_sources/index.rst.txt +182 -0
  64. snappy/doc/_sources/installing.rst.txt +247 -0
  65. snappy/doc/_sources/manifold.rst.txt +6 -0
  66. snappy/doc/_sources/manifoldhp.rst.txt +46 -0
  67. snappy/doc/_sources/news.rst.txt +355 -0
  68. snappy/doc/_sources/other.rst.txt +25 -0
  69. snappy/doc/_sources/platonic_census.rst.txt +20 -0
  70. snappy/doc/_sources/plink.rst.txt +102 -0
  71. snappy/doc/_sources/ptolemy.rst.txt +66 -0
  72. snappy/doc/_sources/ptolemy_classes.rst.txt +42 -0
  73. snappy/doc/_sources/ptolemy_examples1.rst.txt +298 -0
  74. snappy/doc/_sources/ptolemy_examples2.rst.txt +363 -0
  75. snappy/doc/_sources/ptolemy_examples3.rst.txt +301 -0
  76. snappy/doc/_sources/ptolemy_examples4.rst.txt +61 -0
  77. snappy/doc/_sources/ptolemy_prelim.rst.txt +105 -0
  78. snappy/doc/_sources/screenshots.rst.txt +21 -0
  79. snappy/doc/_sources/snap.rst.txt +87 -0
  80. snappy/doc/_sources/snappy.rst.txt +28 -0
  81. snappy/doc/_sources/spherogram.rst.txt +103 -0
  82. snappy/doc/_sources/todo.rst.txt +47 -0
  83. snappy/doc/_sources/triangulation.rst.txt +11 -0
  84. snappy/doc/_sources/tutorial.rst.txt +49 -0
  85. snappy/doc/_sources/verify.rst.txt +210 -0
  86. snappy/doc/_sources/verify_internals.rst.txt +79 -0
  87. snappy/doc/_static/SnapPy-horizontal-128.png +0 -0
  88. snappy/doc/_static/SnapPy.ico +0 -0
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  139. snappy/doc/_static/js/theme.js +1 -0
  140. snappy/doc/_static/js/versions.js +228 -0
  141. snappy/doc/_static/language_data.js +199 -0
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  146. snappy/doc/_static/snappy_furo.css +33 -0
  147. snappy/doc/_static/snappy_sphinx_rtd_theme.css +42 -0
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  149. snappy/doc/additional_classes.html +1500 -0
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  152. snappy/doc/credits.html +181 -0
  153. snappy/doc/development.html +384 -0
  154. snappy/doc/genindex.html +1331 -0
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  157. snappy/doc/manifold.html +3452 -0
  158. snappy/doc/manifoldhp.html +180 -0
  159. snappy/doc/news.html +388 -0
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  162. snappy/doc/platonic_census.html +375 -0
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  164. snappy/doc/ptolemy.html +254 -0
  165. snappy/doc/ptolemy_classes.html +1144 -0
  166. snappy/doc/ptolemy_examples1.html +409 -0
  167. snappy/doc/ptolemy_examples2.html +471 -0
  168. snappy/doc/ptolemy_examples3.html +414 -0
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  171. snappy/doc/py-modindex.html +165 -0
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  178. snappy/doc/todo.html +166 -0
  179. snappy/doc/triangulation.html +1584 -0
  180. snappy/doc/tutorial.html +159 -0
  181. snappy/doc/verify.html +330 -0
  182. snappy/doc/verify_internals.html +1235 -0
  183. snappy/drilling/__init__.py +456 -0
  184. snappy/drilling/barycentric.py +103 -0
  185. snappy/drilling/constants.py +5 -0
  186. snappy/drilling/crush.py +270 -0
  187. snappy/drilling/cusps.py +125 -0
  188. snappy/drilling/debug.py +242 -0
  189. snappy/drilling/epsilons.py +6 -0
  190. snappy/drilling/exceptions.py +55 -0
  191. snappy/drilling/moves.py +620 -0
  192. snappy/drilling/peripheral_curves.py +210 -0
  193. snappy/drilling/perturb.py +188 -0
  194. snappy/drilling/shorten.py +36 -0
  195. snappy/drilling/subdivide.py +274 -0
  196. snappy/drilling/test.py +23 -0
  197. snappy/drilling/test_cases.py +126 -0
  198. snappy/drilling/tracing.py +351 -0
  199. snappy/exceptions.py +26 -0
  200. snappy/export_stl.py +120 -0
  201. snappy/exterior_to_link/__init__.py +2 -0
  202. snappy/exterior_to_link/barycentric_geometry.py +463 -0
  203. snappy/exterior_to_link/exceptions.py +6 -0
  204. snappy/exterior_to_link/geodesic_map.json +14408 -0
  205. snappy/exterior_to_link/hyp_utils.py +112 -0
  206. snappy/exterior_to_link/link_projection.py +323 -0
  207. snappy/exterior_to_link/main.py +197 -0
  208. snappy/exterior_to_link/mcomplex_with_expansion.py +261 -0
  209. snappy/exterior_to_link/mcomplex_with_link.py +687 -0
  210. snappy/exterior_to_link/mcomplex_with_memory.py +162 -0
  211. snappy/exterior_to_link/pl_utils.py +491 -0
  212. snappy/exterior_to_link/put_in_S3.py +156 -0
  213. snappy/exterior_to_link/rational_linear_algebra.py +123 -0
  214. snappy/exterior_to_link/rational_linear_algebra_wrapped.py +135 -0
  215. snappy/exterior_to_link/simplify_to_base_tri.py +114 -0
  216. snappy/exterior_to_link/stored_moves.py +475 -0
  217. snappy/exterior_to_link/test.py +31 -0
  218. snappy/filedialog.py +28 -0
  219. snappy/geometric_structure/__init__.py +212 -0
  220. snappy/geometric_structure/cusp_neighborhood/__init__.py +3 -0
  221. snappy/geometric_structure/cusp_neighborhood/complex_cusp_cross_section.py +697 -0
  222. snappy/geometric_structure/cusp_neighborhood/cusp_cross_section_base.py +484 -0
  223. snappy/geometric_structure/cusp_neighborhood/exceptions.py +42 -0
  224. snappy/geometric_structure/cusp_neighborhood/real_cusp_cross_section.py +298 -0
  225. snappy/geometric_structure/cusp_neighborhood/tiles_for_cusp_neighborhood.py +159 -0
  226. snappy/geometric_structure/cusp_neighborhood/vertices.py +32 -0
  227. snappy/geometric_structure/geodesic/__init__.py +0 -0
  228. snappy/geometric_structure/geodesic/add_core_curves.py +152 -0
  229. snappy/geometric_structure/geodesic/avoid_core_curves.py +369 -0
  230. snappy/geometric_structure/geodesic/canonical_keys.py +52 -0
  231. snappy/geometric_structure/geodesic/check_away_from_core_curve.py +60 -0
  232. snappy/geometric_structure/geodesic/constants.py +6 -0
  233. snappy/geometric_structure/geodesic/exceptions.py +22 -0
  234. snappy/geometric_structure/geodesic/fixed_points.py +93 -0
  235. snappy/geometric_structure/geodesic/geodesic_start_point_info.py +435 -0
  236. snappy/geometric_structure/geodesic/graph_trace_helper.py +67 -0
  237. snappy/geometric_structure/geodesic/line.py +30 -0
  238. snappy/geometric_structure/geodesic/multiplicity.py +127 -0
  239. snappy/geometric_structure/geodesic/tiles_for_geodesic.py +101 -0
  240. snappy/geometric_structure/test.py +22 -0
  241. snappy/gui.py +121 -0
  242. snappy/horoviewer.py +443 -0
  243. snappy/hyperboloid/__init__.py +212 -0
  244. snappy/hyperboloid/distances.py +245 -0
  245. snappy/hyperboloid/horoball.py +19 -0
  246. snappy/hyperboloid/line.py +35 -0
  247. snappy/hyperboloid/point.py +9 -0
  248. snappy/hyperboloid/triangle.py +29 -0
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  250. snappy/infowindow.py +65 -0
  251. snappy/isometry_signature.py +382 -0
  252. snappy/len_spec/__init__.py +596 -0
  253. snappy/len_spec/geodesic_info.py +110 -0
  254. snappy/len_spec/geodesic_key_info_dict.py +117 -0
  255. snappy/len_spec/geodesic_piece.py +143 -0
  256. snappy/len_spec/geometric_structure.py +182 -0
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  258. snappy/len_spec/length_spectrum_geodesic_info.py +170 -0
  259. snappy/len_spec/spine.py +206 -0
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  261. snappy/len_spec/test_cases.py +69 -0
  262. snappy/len_spec/tile.py +275 -0
  263. snappy/len_spec/word.py +86 -0
  264. snappy/manifolds/HTWKnots/alternating.gz +0 -0
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  271. snappy/pari.py +41 -0
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  277. snappy/ptolemy/fieldExtensions.py +153 -0
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  467. snappy/twister/twister_core.cpython-313-darwin.so +0 -0
  468. snappy/upper_halfspace/__init__.py +146 -0
  469. snappy/upper_halfspace/ideal_point.py +26 -0
  470. snappy/verify/__init__.py +13 -0
  471. snappy/verify/canonical.py +542 -0
  472. snappy/verify/complex_volume/__init__.py +18 -0
  473. snappy/verify/complex_volume/adjust_torsion.py +86 -0
  474. snappy/verify/complex_volume/closed.py +168 -0
  475. snappy/verify/complex_volume/compute_ptolemys.py +90 -0
  476. snappy/verify/complex_volume/cusped.py +56 -0
  477. snappy/verify/complex_volume/extended_bloch.py +201 -0
  478. snappy/verify/cusp_translations.py +85 -0
  479. snappy/verify/edge_equations.py +80 -0
  480. snappy/verify/exceptions.py +254 -0
  481. snappy/verify/hyperbolicity.py +224 -0
  482. snappy/verify/interval_newton_shapes_engine.py +523 -0
  483. snappy/verify/interval_tree.py +400 -0
  484. snappy/verify/krawczyk_shapes_engine.py +518 -0
  485. snappy/verify/maximal_cusp_area_matrix/__init__.py +46 -0
  486. snappy/verify/maximal_cusp_area_matrix/cusp_tiling_engine.py +419 -0
  487. snappy/verify/maximal_cusp_area_matrix/cusp_translate_engine.py +153 -0
  488. snappy/verify/real_algebra.py +286 -0
  489. snappy/verify/shapes.py +25 -0
  490. snappy/verify/short_slopes.py +200 -0
  491. snappy/verify/square_extensions.py +1005 -0
  492. snappy/verify/test.py +78 -0
  493. snappy/verify/upper_halfspace/__init__.py +9 -0
  494. snappy/verify/upper_halfspace/extended_matrix.py +100 -0
  495. snappy/verify/upper_halfspace/finite_point.py +283 -0
  496. snappy/verify/upper_halfspace/ideal_point.py +426 -0
  497. snappy/verify/volume.py +128 -0
  498. snappy/version.py +2 -0
  499. snappy-3.2.dist-info/METADATA +58 -0
  500. snappy-3.2.dist-info/RECORD +503 -0
  501. snappy-3.2.dist-info/WHEEL +5 -0
  502. snappy-3.2.dist-info/entry_points.txt +2 -0
  503. snappy-3.2.dist-info/top_level.txt +28 -0
@@ -0,0 +1,243 @@
1
+ # $Id: arrow.py,v 1.3 2003/04/30 19:59:58 t3m Exp $
2
+ # t3m - software for studying triangulated 3-manifolds
3
+ # Copyright (C) 2002 Marc Culler, Nathan Dunfield and others
4
+ #
5
+ # This program is distributed under the terms of the
6
+ # GNU General Public License, version 2 or later, as published by
7
+ # the Free Software Foundation. See the file GPL.txt for details.
8
+
9
+ from .simplex import *
10
+ from .perm4 import Perm4, inv
11
+
12
+ # I have implemented Casson's Arrow as a class whose attributes are
13
+ # "an edge in a face in a tetrahedron". The Edge attribute is the
14
+ # (unoriented) edge opposite to the arrow, if the arrow is thought of
15
+ # as a directed edge. The Face attribute is the face that is disjoint
16
+ # from the directed edge, except that it contains the head vertex,
17
+ # i.e. the Face is the face that is normally associated to the arrow
18
+ # when the arrow is used for gluing faces together.
19
+
20
+ # The eArrow class is an extension of Arrow that is initialized by
21
+ # specifying the head and tail vertices.
22
+
23
+ # I have followed Nathan's convention that a "null arrow" is an arrow
24
+ # whose Tetrahedron attribute is None. If an arrow A represents a
25
+ # boundary face then A.glued() is a null arrow. If either A or B is a
26
+ # Null Arrow then both A.glue(B) and B.glue(A) cause the appropriate
27
+ # Neighbor of the non-None Tetrahedron to be set to None, creating a
28
+ # boundary face. This trick allows deceptively short code to be used
29
+ # in writing the two_to_zero move. NOTE: The Arrow.next method does NOT
30
+ # return a null arrow if the face is a boundary face. It returns None.
31
+
32
+ # Arrows seem to be handy for gluing tetrahedra together without too
33
+ # much fussing about how vertices of a tetrahedron are numbered.
34
+ # I have not tried to figure out how they will break if you try to
35
+ # use them in a non-orientable manifold.
36
+
37
+
38
+ # For speed, we create a lookup table for all possible gluing permutations
39
+
40
+ _arrow_gluing_dict = {}
41
+ for edge0, face0 in EdgeFacePairs:
42
+ for edge1, face1 in EdgeFacePairs:
43
+ perm = Perm4({FaceIndex[face0]:FaceIndex[flip_face[edge1, face1]],
44
+ FaceIndex[flip_face[edge0, face0]]:FaceIndex[face1]})
45
+ glued_face = perm.image(face0)
46
+ _arrow_gluing_dict[edge0, face0, edge1, face1] = (perm, inv(perm), glued_face)
47
+
48
+
49
+ # Another table to speed Arrow.opposite
50
+
51
+ _arrow_opposite_dict = {}
52
+ for edge, face in EdgeFacePairs:
53
+ tail = comp(face)
54
+ head = face & comp(edge)
55
+ new_face = comp(OppTail[(tail, head)])
56
+ new_edge = comp(edge)
57
+ _arrow_opposite_dict[edge, face] = (new_edge, new_face)
58
+
59
+
60
+ # Another table to speed Arrow.next
61
+
62
+ _arrow_next_dict = {}
63
+ for edge, face in EdgeFacePairs:
64
+ for perm in Perm4.S4():
65
+ new_edge = perm.image(edge)
66
+ new_face = flip_face[new_edge, perm.image(face)]
67
+ _arrow_next_dict[perm._index, edge, face] = (new_edge, new_face)
68
+
69
+
70
+ class Arrow:
71
+
72
+ def __init__(self, edge, face, tet):
73
+ self.Edge = edge
74
+ self.Face = face
75
+ self.Tetrahedron = tet
76
+
77
+ def __repr__(self):
78
+ return ('< '+SubsimplexName[self.Edge]+' | ' +
79
+ SubsimplexName[self.Face]+' | '+str(self.Tetrahedron)+' >')
80
+
81
+ def head(self):
82
+ return self.Face & comp(self.Edge)
83
+
84
+ def tail(self):
85
+ return comp(self.Face)
86
+
87
+ # Here are the six edges of the tetrahedron, as seen from the
88
+ # point of view of the arrow.
89
+ def equator(self):
90
+ return self.Tetrahedron.Class[comp(self.Edge)]
91
+
92
+ def axis(self):
93
+ return self.Tetrahedron.Class[self.Edge]
94
+
95
+ def north_head(self):
96
+ return self.Tetrahedron.Class[self.head() | OppTail[self.head(),self.tail()]]
97
+
98
+ def south_head(self):
99
+ return self.Tetrahedron.Class[self.head() | OppTail[self.tail(),self.head()]]
100
+
101
+ def north_tail(self):
102
+ return self.Tetrahedron.Class[self.tail() | OppTail[self.head(),self.tail()]]
103
+
104
+ def south_tail(self):
105
+ return self.Tetrahedron.Class[self.tail() | OppTail[self.tail(),self.head()]]
106
+
107
+ def is_null(self):
108
+ return 1 if self.Tetrahedron is None else 0
109
+
110
+ def face_class(self):
111
+ return self.Tetrahedron.Class[self.Face]
112
+
113
+ # Does NOT create a new arrow.
114
+ def reverse(self):
115
+ self.Face = flip_face[self.Edge, self.Face]
116
+ return self
117
+
118
+ # By successive applications of self.next() you can walk around an edge.
119
+ # The sequence of 1-subsimplices self.Edge are all equivalent.
120
+ # The sequence of 2-subsimplices self.Face are the faces adjacent to the edge.
121
+ # When you hit the boundary, self.next() returns None without changing self.
122
+ # Does NOT create a new arrow.
123
+ def next(self):
124
+ if self.Tetrahedron is not None:
125
+ perm = self.Tetrahedron.Gluing[self.Face]
126
+ tet = self.Tetrahedron.Neighbor[self.Face]
127
+ if tet is None:
128
+ return None
129
+
130
+ # Next line equivalent to:
131
+ # self.Edge = perm.image(self.Edge)
132
+ # self.Face = flip_face[self.Edge, perm.image(self.Face)]
133
+ self.Edge, self.Face = _arrow_next_dict[perm._index, self.Edge, self.Face]
134
+ self.Tetrahedron = tet
135
+ return self
136
+
137
+ # Glues two faces together so that other becomes self.next().
138
+ # Returns None
139
+ def glue(self, other):
140
+ if self.Tetrahedron is None and other.Tetrahedron is None:
141
+ return
142
+ if self.Tetrahedron is None:
143
+ other.reverse().glue(self)
144
+ other.reverse()
145
+ return
146
+ if other.Tetrahedron is None:
147
+ self.Tetrahedron.attach(self.Face, None, (0,1,2,3))
148
+ return
149
+ # We do this manually for speed. The below code is equivalent to
150
+ #
151
+ # self.Tetrahedron.attach(self.Face, other.Tetrahedron,
152
+ # { FaceIndex[self.Face]:FaceIndex[flip_face(other.Edge,other.Face)],
153
+ # FaceIndex[flip_face(self.Edge,self.Face)]:FaceIndex[other.Face] })
154
+ tet0, face0, edge0 = self.Tetrahedron, self.Face, self.Edge
155
+ tet1, face1, edge1 = other.Tetrahedron, other.Face, other.Edge
156
+ perm, inv_perm, glued_face = _arrow_gluing_dict[edge0, face0, edge1, face1]
157
+ tet0.Neighbor[face0] = tet1
158
+ tet0.Gluing[face0] = perm
159
+ tet1.Neighbor[glued_face] = tet0
160
+ tet1.Gluing[glued_face] = inv_perm
161
+
162
+ # Returns a COPY of self.next(), or a null arrow in the case of a boundary
163
+ # face.
164
+ # DOES create a new arrow.
165
+ def glued(self):
166
+ a = self.copy()
167
+ if a.next() is None:
168
+ a.Tetrahedron = None
169
+ return a
170
+
171
+ # Changes the arrow into its opposite.
172
+ # Does NOT create a new arrow.
173
+ def opposite(self):
174
+ # Equivalent to
175
+ # self.Face = comp(OppTail[(self.tail(),self.head())])
176
+ # self.Edge = comp(self.Edge)
177
+ self.Edge, self.Face = _arrow_opposite_dict[self.Edge, self.Face]
178
+ return self
179
+
180
+ # Rotate arrow n/3 turns clockwise about self.head()
181
+ # Does NOT create a new arrow
182
+ def rotate(self, n):
183
+ for i in range(n % 3):
184
+ head = self.head()
185
+ tail = self.tail()
186
+ self.Edge = tail | OppTail[(tail, head)]
187
+ self.Face = self.Edge | head
188
+ return self
189
+
190
+ # DOES create a new arrow.
191
+ def copy(self):
192
+ return Arrow(self.Edge, self.Face, self.Tetrahedron)
193
+
194
+ # Two arrows are equal if their attributes are equal. The
195
+ # null arrows must be handled separately. This also allows
196
+ # comparison with None.
197
+ def __eq__(self, other):
198
+ if other is None:
199
+ return False
200
+ if self.Tetrahedron is None and other.Tetrahedron is None:
201
+ return True
202
+ return (self.Tetrahedron == other.Tetrahedron and
203
+ self.Edge == other.Edge and
204
+ self.Face == other.Face)
205
+
206
+ def __ne__(self, other):
207
+ return not self.__eq__(other)
208
+
209
+ # The arrows associated to a given edge e form a cycle of edges linking
210
+ # e. This function returns a list of the edges in that linking cycle.
211
+ def linking_cycle(self):
212
+ a = self.copy()
213
+ cycle = []
214
+ while 1:
215
+ cycle.append(a.Tetrahedron.Class[OppositeEdge[a.Edge]])
216
+ a.next()
217
+ if a == self:
218
+ break
219
+ return cycle
220
+
221
+ # This function returns a list of those edges that are adjacent to the
222
+ # edge associated to the arrow, and meet it at its tail.
223
+ def radii(self):
224
+ a = self.copy()
225
+ radius_list = []
226
+ while 1:
227
+ a.rotate(2)
228
+ radius_list.append(a.Tetrahedron.Class[OppositeEdge[a.Edge]])
229
+ a.rotate(1).next()
230
+ if a == self:
231
+ break
232
+ return radius_list
233
+
234
+
235
+ # This class allows one to initialize an arrow by specifying the head and
236
+ # tail vertices of the directed edge.
237
+ #
238
+ class eArrow(Arrow):
239
+
240
+ def __init__(self, tet, tail, head):
241
+ self.Edge = comp( tail | head )
242
+ self.Face = comp( tail )
243
+ self.Tetrahedron = tet
@@ -0,0 +1,22 @@
1
+ # $Id: corner.py,v 1.2 2002/09/20 03:52:16 culler Exp $
2
+ # t3m - software for studying triangulated 3-manifolds
3
+ # Copyright (C) 2002 Marc Culler, Nathan Dunfield and others
4
+ #
5
+ # This program is distributed under the terms of the
6
+ # GNU General Public License, version 2 or later, as published by
7
+ # the Free Software Foundation. See the file GPL.txt for details.
8
+
9
+ from .simplex import SubsimplexName
10
+
11
+ # A Corner is a "subsimplex in a tetrahedron".
12
+
13
+
14
+ class Corner:
15
+
16
+ def __init__(self, tetrahedron, subsimplex):
17
+ self.Tetrahedron = tetrahedron
18
+ self.Subsimplex = subsimplex
19
+
20
+ def __repr__(self):
21
+ return ('<'+SubsimplexName[self.Subsimplex] + ' of ' +
22
+ str(self.Tetrahedron) + '>')
@@ -0,0 +1,172 @@
1
+ # $Id: edge.py,v 1.3 2002/09/20 03:52:16 culler Exp $
2
+ # t3m - software for studying triangulated 3-manifolds
3
+ # Copyright (C) 2002 Marc Culler, Nathan Dunfield and others
4
+ #
5
+ # This program is distributed under the terms of the
6
+ # GNU General Public License, version 2 or later, as published by
7
+ # the Free Software Foundation. See the file GPL.txt for details.
8
+
9
+ from .simplex import *
10
+ from .corner import Corner
11
+ from .arrow import Arrow
12
+ from .perm4 import Perm4
13
+ import sys
14
+
15
+ # A table used for _add_corner, equivalent to:
16
+ # other_arrow = arrow.copy().opposite()
17
+ # tail, head = other_arrow.tail(), other_arrow.head()
18
+
19
+ _edge_add_corner_dict = {}
20
+ for edge, face in EdgeFacePairs:
21
+ other_arrow = Arrow(edge, face, None).opposite()
22
+ _edge_add_corner_dict[edge, face] = other_arrow.tail(), other_arrow.head()
23
+
24
+
25
+ # An edge has an initial and terminal vertex, but these are determined
26
+ # arbitrarily when the 1-skeleton is constructed.
27
+
28
+ class Edge:
29
+
30
+ def __init__(self):
31
+ self.Index = -1
32
+ self.Name = ''
33
+ self.IntOrBdry = '' # value: '', 'int' or 'bdry'
34
+ self.Corners = [] # Corners of type "1-simplex in Tetrahedron"
35
+ self.Vertices = [] # pairs: (initial Vertex, terminal Vertex)
36
+ self.LeftBdryArrow = None # Arrows representing the two boundary faces,
37
+ self.RightBdryArrow = None # if this is a boundary edge.
38
+ self._edge_orient_cache = {}
39
+
40
+ def __repr__(self):
41
+ if self.Index > -1:
42
+ return ('e' + str(self.Index) + self.Name +
43
+ ' (' + self.IntOrBdry + ')')
44
+ else:
45
+ return '< floating edge' + str(id(self)) + ' >'
46
+
47
+ # below added by NMD for more detailed printing
48
+
49
+ # returns an arrow rotating around self
50
+
51
+ def get_arrow(self):
52
+ e = self.Corners[0].Subsimplex
53
+ return Arrow(e, RightFace[e], self.Corners[0].Tetrahedron)
54
+
55
+ def info(self, out=sys.stdout):
56
+ out.write(repr(self) + "\t Edge of valence %d\tEndpoints %s\n"
57
+ % (self.valence(), self.Vertices))
58
+ if self.IntOrBdry == 'bdry':
59
+ a = self.LeftBdryArrow.copy()
60
+ a.reverse()
61
+ else:
62
+ a = self.get_arrow()
63
+ s = "\t"
64
+ for i in range(self.valence()):
65
+ s = s + repr(a) + " "
66
+ a.next()
67
+ if i > 0 and (i + 1) % 3 == 0 and i != (self.valence()-1):
68
+ s = s + "\n\t"
69
+ out.write(s + '\n')
70
+
71
+ def valence(self):
72
+ return len(self.Corners)
73
+
74
+ # Return 1 if all corners belong to distinct tetrahedra.
75
+ def distinct(self):
76
+ for corner in self.Corners:
77
+ corner.Tetrahedron.Checked = 0
78
+ for corner in self.Corners:
79
+ if corner.Tetrahedron.Checked == 1:
80
+ return 0
81
+ else:
82
+ corner.Tetrahedron.Checked = 1
83
+ return 1
84
+
85
+ # Return 1 if two sides of a 2-simplex are identified to the edge.
86
+ def self_adjacent(self):
87
+ for corner in self.Corners:
88
+ for one_subsimplex in AdjacentEdges[corner.Subsimplex]:
89
+ if corner.Tetrahedron.Class[one_subsimplex] is self:
90
+ return 1
91
+ return 0
92
+
93
+ # Return 1 if two opposite edges of a 3-simplex are identified to
94
+ # the edge.
95
+ def self_opposite(self):
96
+ count = 0
97
+ for corner in self.Corners:
98
+ if corner.Tetrahedron.Class[comp(corner.Subsimplex)] == self:
99
+ count = count + 1
100
+ return count/2
101
+
102
+ # Remove all references to self from adjoining Tetrahedra and Vertices
103
+ def erase(self):
104
+ for corner in self.Corners:
105
+ corner.Tetrahedron.Class[corner.Subsimplex] = None
106
+ for vertex in self.Vertices:
107
+ try:
108
+ vertex.Edges.remove(self)
109
+ except:
110
+ pass
111
+ self.Index = -1
112
+
113
+ # Below added 7/6/99 by NMD. Given a tetrahedra and a pair of vertices
114
+ # (a, b) returns the orientation of the edge self with respect to the arrow
115
+ # (a -> b). Returns 1 if the orientations agree and -1 if they differ.
116
+ # raises an exception if the arrow is not on this edge.
117
+
118
+ def orientation_with_respect_to(self, tet, a, b):
119
+ try:
120
+ return self._edge_orient_cache[(tet, a, b)]
121
+ except IndexError:
122
+ raise ValueError("Given corner of tet not on this edge")
123
+
124
+ def index(self):
125
+ return self.Index
126
+
127
+ def _first_embedding(self):
128
+ """
129
+ For this edge, return an edge embedding similar
130
+ to regina, that is a pair (tetrahedron, permutation) such that
131
+ vertex 0 and 1 of the tetrahedron span the edge.
132
+ """
133
+
134
+ corner = self.Corners[0]
135
+ tet = corner.Tetrahedron
136
+
137
+ for perm in Perm4.A4():
138
+ if corner.Subsimplex == perm.image(E01):
139
+ # Match orientation of edge given by Vertices
140
+ if tet.Class[perm.image(V0)] == self.Vertices[0]:
141
+ if tet.Class[perm.image(V1)] == self.Vertices[1]:
142
+ return (tet, perm)
143
+
144
+ def embeddings(self):
145
+ """
146
+ Iterator through the embeddings of this edge.
147
+ An edge embedding is a pair (tetrahedron, permutation) such that
148
+ vertices of the tetrahedron that are labeled by the images of 0 and 1
149
+ under the permutation span the edge. The images of 2 and 3 of the edge
150
+ embeddings are in an orientation compatible way.
151
+ This is similar to the NEdgeEmbeddings of regina.
152
+ """
153
+
154
+ order = len(self.Corners)
155
+ tet, perm = self._first_embedding()
156
+ for i in range(order):
157
+ yield tet, perm
158
+ face = perm.image(F2)
159
+ tet, perm = (
160
+ tet.Neighbor[face], tet.Gluing[face] * perm * Perm4( (0,1,3,2) ))
161
+
162
+ def _add_corner(self, arrow):
163
+ """
164
+ Used by Mcomplex.build_edge_classes
165
+ """
166
+ self.Corners.append(Corner(arrow.Tetrahedron, arrow.Edge))
167
+ # Next line equivalent to:
168
+ # other_arrow = arrow.copy().opposite()
169
+ # tail, head = other_arrow.tail(), other_arrow.head()
170
+ tail, head = _edge_add_corner_dict[arrow.Edge, arrow.Face]
171
+ self._edge_orient_cache[arrow.Tetrahedron, tail, head] = 1
172
+ self._edge_orient_cache[arrow.Tetrahedron, head, tail] = -1
@@ -0,0 +1,37 @@
1
+ # $$
2
+ # t3m - software for studying triangulated 3-manifolds
3
+ # Copyright (C) 2002 Marc Culler, Nathan Dunfield and others
4
+ #
5
+ # This program is distributed under the terms of the
6
+ # GNU General Public License, version 2 or later, as published by
7
+ # the Free Software Foundation. See the file GPL.txt for details.
8
+
9
+ from .arrow import Arrow
10
+ from .simplex import PickAnEdge
11
+
12
+
13
+ class Face:
14
+ def __init__(self):
15
+ self.Index = -1
16
+ self.IntOrBdry = ''
17
+ self.Corners = [] # Corners of type "2-simplex in Tetrahedron"
18
+
19
+ def __repr__(self):
20
+ if self.Index > -1:
21
+ return ('f' + str(self.Index)
22
+ + ' (' + self.IntOrBdry + ')')
23
+ else:
24
+ return '< floating face' + str(id(self)) + ' >'
25
+
26
+ def erase(self):
27
+ for corner in self.Corners:
28
+ corner.Tetrahedron.Class[corner.Subsimplex] = None
29
+ self.Index = -1
30
+
31
+ def bdry_arrow(self):
32
+ if self.IntOrBdry != 'bdry':
33
+ return None
34
+ face = self.Corners[0].Subsimplex
35
+ tet = self.Corners[0].Tetrahedron
36
+ edge = PickAnEdge[face]
37
+ return Arrow(edge, face, tet)
@@ -0,0 +1,211 @@
1
+ # t3m - software for studying triangulated 3-manifolds
2
+ # Copyright (C) 2002 Marc Culler, Nathan Dunfield and others
3
+ #
4
+ # This program is distributed under the terms of the
5
+ # GNU General Public License, version 2 or later, as published by
6
+ # the Free Software Foundation. See the file GPL.txt for details.
7
+
8
+ from .arrow import eArrow
9
+ from .simplex import *
10
+ from .tetrahedron import Tetrahedron
11
+ import re
12
+
13
+ # Nathan's code for importing and exporting snappea files.
14
+ # Converts a SnapPea file to MComplex. Doesn't really use all the
15
+ # structure of the SnapPea file as it relies only on the fact that the
16
+ # gluing data for the ith pair of tetrahedra is given by the ith pair
17
+ # of lines like:
18
+ #
19
+ # 2 5 1 34
20
+ # 3120 0321 0132 0132
21
+
22
+
23
+ def read_SnapPea_file(file_name=None, data=None):
24
+ if data is None:
25
+ data = open(file_name).read().decode('ascii')
26
+ count = 0
27
+
28
+ neighbors_match = r"^\s*(\d+)\s+(\d+)\s+(\d+)\s+(\d+)\s*$"
29
+ perm_match = r"\s*([0123]{4,4})\s+([0123]{4,4})\s+([0123]{4,4})\s+([0123]{4,4})\s*$"
30
+ snappea_re = re.compile(neighbors_match + perm_match, re.MULTILINE)
31
+
32
+ fake_tets = []
33
+
34
+ curr_poss = 0
35
+ while 1:
36
+ m = snappea_re.search(data, curr_poss)
37
+ if not m:
38
+ break
39
+ else:
40
+ neighbors = [int(g) for g in m.group(1,2,3,4)]
41
+ perms = []
42
+ for perm in m.group(5,6,7,8):
43
+ perm = [int(p) for p in [perm[0], perm[1], perm[2], perm[3]]]
44
+ perms.append(perm)
45
+ fake_tets.append( (neighbors, perms) )
46
+ curr_poss = m.end(8)
47
+ return fake_tets
48
+
49
+ # ------------End function SnapPea to Mcomplex--------------------
50
+
51
+
52
+ # Exports an Mcomplex in SnapPea 2.0 format.
53
+ # ASSUMES THAT THE MANIFOLD IS ORIENTABLE AND THAT THE LINK OF
54
+ # ANY VERTEX HAS GENUS AT MOST ONE.
55
+
56
+ def write_SnapPea_file(mcomplex, fileobject):
57
+ out = fileobject.write
58
+ if hasattr(fileobject, 'name'):
59
+ name = fileobject.name
60
+ else:
61
+ name = 'untitled'
62
+
63
+ out("% Triangulation\n\n" + name + "\nnot_attempted 0.0\nunknown_orientability\nCS_unknown\n\n")
64
+
65
+ torus_cusps = []
66
+ for vertex in mcomplex.Vertices:
67
+ g = vertex.link_genus()
68
+ if g > 1:
69
+ raise ValueError("Link of vertex has genus more than 1.")
70
+ if g == 1:
71
+ torus_cusps.append(vertex)
72
+
73
+ # All torus cusps are unfilled
74
+
75
+ out("%d 0\n" % len(torus_cusps))
76
+ for i in torus_cusps:
77
+ out( " torus 0.000000000000 0.000000000000\n" )
78
+
79
+ out("\n")
80
+
81
+ # The num of tetrahedra
82
+
83
+ out("%d\n" % len(mcomplex))
84
+
85
+ # Output the tetraheda themselves.
86
+
87
+ for tet in mcomplex.Tetrahedra:
88
+ for face in TwoSubsimplices:
89
+ out(" %d" % mcomplex.Tetrahedra.index( tet.Neighbor[face]))
90
+ out("\n")
91
+ for face in TwoSubsimplices:
92
+ out(" %d%d%d%d" % tet.Gluing[face].tuple())
93
+
94
+ out("\n")
95
+ for vert in ZeroSubsimplices:
96
+ vertex = tet.Class[vert]
97
+ if vertex.link_genus() == 1:
98
+ out("%d " % torus_cusps.index(vertex))
99
+ else:
100
+ out("-1 ")
101
+ out("\n")
102
+ if hasattr(tet, 'PeripheralCurves'):
103
+ for curve in tet.PeripheralCurves:
104
+ for sheet in curve:
105
+ for v in ZeroSubsimplices:
106
+ for f in TwoSubsimplices:
107
+ out("%d " % sheet[v][f])
108
+ if v == V3:
109
+ out("\n")
110
+ else:
111
+ out(" ")
112
+ else:
113
+ for i in range(4):
114
+ out("0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0\n")
115
+ out("0.0 0.0\n\n")
116
+
117
+
118
+ # Nathan's code for importing and exporting geo files.
119
+ #
120
+ # converts Casson's u, v, w, x into 0, 1, 2, 3
121
+
122
+ conv = {"u" : V0, "v" : V1, "w" : V2, "x" : V3}
123
+ conv_back = {V0: "u", V1 : "v", V2 : "w", V3: "x"}
124
+
125
+ # Geo saves edges in the form "5ux". This function returns
126
+ # (tet_num, starting_vertex, ending_vertex). Because Casson
127
+ # starts his indexing of tets at 1 and Jeff starts at 0,
128
+ # we subtract 1.
129
+
130
+
131
+ def read_edge(edge):
132
+ m = re.match("([0-9]+)([uvwx])([uvwx])", edge)
133
+ return (int(m.group(1)) - 1, conv[m.group(2)], conv[m.group(3)])
134
+
135
+ # Geo stores manifolds by storing the link around each edge. This
136
+ # function takes two successive edges in the link and glues the
137
+ # corresponding tetrahedra together.
138
+
139
+
140
+ def read_geo_file(file_name, num_tet=None):
141
+ data = open(file_name).readlines()
142
+ if num_tet is None:
143
+ num_tet = len(data) - 2
144
+ tets = []
145
+ for i in range(num_tet):
146
+ tets.append(Tetrahedron())
147
+
148
+ for line in data[1 : ]:
149
+ line = line.decode('ascii')
150
+ cycle = re.split(r"\s+", line[ : -1])[1 : ]
151
+ for i in range(len(cycle)):
152
+ t1, v1, v2 = read_edge(cycle[i])
153
+ t2, w1, w2 = read_edge(cycle[(i+1) % len(cycle)]) # Yes, that's w2, w1
154
+ a = eArrow(tets[t1], v1, v2)
155
+ b = eArrow(tets[t2], w1, w2)
156
+ a.glue(b)
157
+
158
+ return Mcomplex(tets)
159
+
160
+ # ---------Code to go from Mcomplex to Geo---------------------
161
+
162
+
163
+ def write_geo_file(mcomplex, fileobject):
164
+ out = fileobject.write
165
+ out("k\n")
166
+ i = 1
167
+ for edge in mcomplex.Edges:
168
+ tet = edge.Corners[0].Tetrahedron
169
+ edge_name = edge.Corners[0].Subsimplex
170
+ init = Head[edge_name]
171
+ fin = Tail[edge_name]
172
+ a = eArrow(tet, init, fin).opposite()
173
+ b = a.copy()
174
+ out("%d\t%d%s%s " % (i, mcomplex.Tetrahedra.index(b.Tetrahedron) + 1,
175
+ conv_back[b.tail()], conv_back[b.head()]))
176
+ b.next()
177
+ while b != a:
178
+ out("%d%s%s " % (mcomplex.Tetrahedra.index(b.Tetrahedron) + 1,
179
+ conv_back[b.tail()], conv_back[b.head()]))
180
+ b.next()
181
+
182
+ i = i + 1
183
+ out("\n")
184
+
185
+
186
+ # writing a file for Matveev's program Spine
187
+
188
+ def write_spine_file(mcomplex, fileobject):
189
+ out = fileobject.write
190
+ for edge in mcomplex.Edges:
191
+ n = edge.valence()
192
+ A = edge.get_arrow()
193
+ tets, global_faces, local_faces, back_local_faces = [], [], [], []
194
+ for i in range(n):
195
+ tets.append(A.Tetrahedron.Index + 1)
196
+ global_faces.append(A.Tetrahedron.Class[A.Face].Index + 1)
197
+ local_faces.append(A.Face)
198
+ back_local_faces.append(comp(A.head()))
199
+ A.next()
200
+
201
+ signs = [1 if (tets[i], local_faces[i]) < (tets[(i + 1) % n], back_local_faces[(i + 1) % n]) else -1 for i in range(n)]
202
+ ans = repr([signs[i]*global_faces[i] for i in range(n)])[1:-1].replace(",", "")
203
+ out(ans + "\n")
204
+
205
+
206
+ __all__ = ('read_SnapPea_file',
207
+ 'write_SnapPea_file',
208
+ 'read_geo_file',
209
+ 'write_geo_file',
210
+ 'write_spine_file',
211
+ )