snappy 3.2__cp313-cp313-macosx_11_0_arm64.whl
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- snappy/ptolemy/testing_files_rur/m052__sl3_c0.rur.bz2 +0 -0
- snappy/ptolemy/utilities.py +236 -0
- snappy/raytracing/__init__.py +64 -0
- snappy/raytracing/additional_horospheres.py +64 -0
- snappy/raytracing/additional_len_spec_choices.py +63 -0
- snappy/raytracing/cohomology_fractal.py +197 -0
- snappy/raytracing/eyeball.py +123 -0
- snappy/raytracing/finite_raytracing_data.py +237 -0
- snappy/raytracing/finite_viewer.py +590 -0
- snappy/raytracing/geodesic_tube_info.py +174 -0
- snappy/raytracing/geodesics.py +246 -0
- snappy/raytracing/geodesics_window.py +258 -0
- snappy/raytracing/gui_utilities.py +293 -0
- snappy/raytracing/hyperboloid_navigation.py +556 -0
- snappy/raytracing/hyperboloid_utilities.py +234 -0
- snappy/raytracing/ideal_raytracing_data.py +592 -0
- snappy/raytracing/inside_viewer.py +974 -0
- snappy/raytracing/pack.py +22 -0
- snappy/raytracing/raytracing_data.py +126 -0
- snappy/raytracing/raytracing_view.py +454 -0
- snappy/raytracing/shaders/Eye.png +0 -0
- snappy/raytracing/shaders/NonGeometric.png +0 -0
- snappy/raytracing/shaders/__init__.py +101 -0
- snappy/raytracing/shaders/fragment.glsl +1744 -0
- snappy/raytracing/test.py +29 -0
- snappy/raytracing/tooltip.py +146 -0
- snappy/raytracing/upper_halfspace_utilities.py +98 -0
- snappy/raytracing/view_scale_controller.py +98 -0
- snappy/raytracing/zoom_slider/__init__.py +263 -0
- snappy/raytracing/zoom_slider/inward.png +0 -0
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- snappy/raytracing/zoom_slider/outward.png +0 -0
- snappy/raytracing/zoom_slider/outward18.png +0 -0
- snappy/raytracing/zoom_slider/test.py +20 -0
- snappy/sage_helper.py +117 -0
- snappy/settings.py +409 -0
- snappy/shell.py +53 -0
- snappy/snap/__init__.py +114 -0
- snappy/snap/character_varieties.py +375 -0
- snappy/snap/find_field.py +372 -0
- snappy/snap/fundamental_polyhedron.py +569 -0
- snappy/snap/generators.py +39 -0
- snappy/snap/interval_reps.py +81 -0
- snappy/snap/kernel_structures.py +128 -0
- snappy/snap/mcomplex_base.py +18 -0
- snappy/snap/nsagetools.py +702 -0
- snappy/snap/peripheral/__init__.py +1 -0
- snappy/snap/peripheral/dual_cellulation.py +219 -0
- snappy/snap/peripheral/link.py +127 -0
- snappy/snap/peripheral/peripheral.py +159 -0
- snappy/snap/peripheral/surface.py +522 -0
- snappy/snap/peripheral/test.py +35 -0
- snappy/snap/polished_reps.py +335 -0
- snappy/snap/shapes.py +152 -0
- snappy/snap/slice_obs_HKL.py +668 -0
- snappy/snap/t3mlite/__init__.py +2 -0
- snappy/snap/t3mlite/arrow.py +243 -0
- snappy/snap/t3mlite/corner.py +22 -0
- snappy/snap/t3mlite/edge.py +172 -0
- snappy/snap/t3mlite/face.py +37 -0
- snappy/snap/t3mlite/files.py +211 -0
- snappy/snap/t3mlite/homology.py +53 -0
- snappy/snap/t3mlite/linalg.py +419 -0
- snappy/snap/t3mlite/mcomplex.py +1499 -0
- snappy/snap/t3mlite/perm4.py +320 -0
- snappy/snap/t3mlite/setup.py +12 -0
- snappy/snap/t3mlite/simplex.py +199 -0
- snappy/snap/t3mlite/spun.py +297 -0
- snappy/snap/t3mlite/surface.py +519 -0
- snappy/snap/t3mlite/test.py +20 -0
- snappy/snap/t3mlite/test_vs_regina.py +86 -0
- snappy/snap/t3mlite/tetrahedron.py +109 -0
- snappy/snap/t3mlite/vertex.py +42 -0
- snappy/snap/test.py +134 -0
- snappy/snap/utilities.py +288 -0
- snappy/test.py +209 -0
- snappy/test_cases.py +263 -0
- snappy/testing.py +131 -0
- snappy/tiling/__init__.py +2 -0
- snappy/tiling/canonical_key_dict.py +59 -0
- snappy/tiling/dict_based_set.py +79 -0
- snappy/tiling/floor.py +49 -0
- snappy/tiling/hyperboloid_dict.py +54 -0
- snappy/tiling/iter_utils.py +78 -0
- snappy/tiling/lifted_tetrahedron.py +22 -0
- snappy/tiling/lifted_tetrahedron_set.py +54 -0
- snappy/tiling/real_hash_dict.py +164 -0
- snappy/tiling/test.py +23 -0
- snappy/tiling/tile.py +215 -0
- snappy/tiling/triangle.py +33 -0
- snappy/tkterminal.py +920 -0
- snappy/twister/__init__.py +20 -0
- snappy/twister/main.py +646 -0
- snappy/twister/surfaces/S_0_1 +3 -0
- snappy/twister/surfaces/S_0_2 +3 -0
- snappy/twister/surfaces/S_0_4 +7 -0
- snappy/twister/surfaces/S_0_4_Lantern +8 -0
- snappy/twister/surfaces/S_1 +3 -0
- snappy/twister/surfaces/S_1_1 +4 -0
- snappy/twister/surfaces/S_1_2 +5 -0
- snappy/twister/surfaces/S_1_2_5 +6 -0
- snappy/twister/surfaces/S_2 +6 -0
- snappy/twister/surfaces/S_2_1 +8 -0
- snappy/twister/surfaces/S_2_heeg +10 -0
- snappy/twister/surfaces/S_3 +8 -0
- snappy/twister/surfaces/S_3_1 +10 -0
- snappy/twister/surfaces/S_4_1 +12 -0
- snappy/twister/surfaces/S_5_1 +14 -0
- snappy/twister/surfaces/heeg_fig8 +9 -0
- snappy/twister/twister_core.cpython-313-darwin.so +0 -0
- snappy/upper_halfspace/__init__.py +146 -0
- snappy/upper_halfspace/ideal_point.py +26 -0
- snappy/verify/__init__.py +13 -0
- snappy/verify/canonical.py +542 -0
- snappy/verify/complex_volume/__init__.py +18 -0
- snappy/verify/complex_volume/adjust_torsion.py +86 -0
- snappy/verify/complex_volume/closed.py +168 -0
- snappy/verify/complex_volume/compute_ptolemys.py +90 -0
- snappy/verify/complex_volume/cusped.py +56 -0
- snappy/verify/complex_volume/extended_bloch.py +201 -0
- snappy/verify/cusp_translations.py +85 -0
- snappy/verify/edge_equations.py +80 -0
- snappy/verify/exceptions.py +254 -0
- snappy/verify/hyperbolicity.py +224 -0
- snappy/verify/interval_newton_shapes_engine.py +523 -0
- snappy/verify/interval_tree.py +400 -0
- snappy/verify/krawczyk_shapes_engine.py +518 -0
- snappy/verify/maximal_cusp_area_matrix/__init__.py +46 -0
- snappy/verify/maximal_cusp_area_matrix/cusp_tiling_engine.py +419 -0
- snappy/verify/maximal_cusp_area_matrix/cusp_translate_engine.py +153 -0
- snappy/verify/real_algebra.py +286 -0
- snappy/verify/shapes.py +25 -0
- snappy/verify/short_slopes.py +200 -0
- snappy/verify/square_extensions.py +1005 -0
- snappy/verify/test.py +78 -0
- snappy/verify/upper_halfspace/__init__.py +9 -0
- snappy/verify/upper_halfspace/extended_matrix.py +100 -0
- snappy/verify/upper_halfspace/finite_point.py +283 -0
- snappy/verify/upper_halfspace/ideal_point.py +426 -0
- snappy/verify/volume.py +128 -0
- snappy/version.py +2 -0
- snappy-3.2.dist-info/METADATA +58 -0
- snappy-3.2.dist-info/RECORD +503 -0
- snappy-3.2.dist-info/WHEEL +5 -0
- snappy-3.2.dist-info/entry_points.txt +2 -0
- snappy-3.2.dist-info/top_level.txt +28 -0
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from .mcomplex_base import *
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from .kernel_structures import *
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from . import t3mlite as t3m
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from .t3mlite import ZeroSubsimplices, simplex
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from .t3mlite import Corner, Perm4
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from .t3mlite import V0, V1, V2, V3
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from ..math_basics import prod
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from functools import reduce
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__all__ = ['FundamentalPolyhedronEngine']
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from ..sage_helper import _within_sage
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if _within_sage:
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from ..sage_helper import matrix
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else:
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from .utilities import Matrix2x2 as matrix
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_VerticesInFace = {
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F: [V for V in simplex.ZeroSubsimplices if t3m.is_subset(V, F)]
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for F in simplex.TwoSubsimplices }
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class FundamentalPolyhedronEngine(McomplexEngine):
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@staticmethod
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def from_manifold_and_shapes(
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manifold, shapes, normalize_matrices=False, match_kernel=True):
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"""
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Given a SnapPy.Manifold and shapes (which can be numbers or intervals),
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create a t3mlite.Mcomplex for the fundamental polyhedron that the
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SnapPea kernel computed, assign each vertex of it to a point on the
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boundary of upper half space H^3, and compute the matrices pairing the
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faces of the fundamental polyhedron. The matrices will have determinant
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one if normalize_matrices is True.
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Some notes about the vertices: We use the one-point
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compactification to represent the boundary of H^3, i.e., we
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either assign a complex number (or interval) to a vertex or
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Infinity (a sentinel in kernel_structures). If match_kernel is True,
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the vertices are at the same positions than in the SnapPea kernel.
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This has the disadvantage that the matrices computed that way no longer
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have entries in the trace field. Use match_kernel is False for matrices
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over the trace field (e.g., obtain the quaternion algebra).
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Some notes about the matrices: If normalize_matrices is False, the
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product of a matrix for a generator and its inverse is not necessarily
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the identity, but a multiple of the identity.
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Even if normalize_matrices is True, the product of matrices
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corresponding to the letters in a relation might still yield minus the
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identity (i.e., we do not lift to SL(2,C)).
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>>> M = Manifold("m004")
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>>> F = FundamentalPolyhedronEngine.from_manifold_and_shapes(
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... M, M.tetrahedra_shapes('rect'))
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The above code adds the given shapes to each edge (here 01) of each
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tetrahedron::
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>>> from snappy.snap.t3mlite import simplex
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>>> F.mcomplex.Tetrahedra[0].ShapeParameters[simplex.E01] # doctest: +NUMERIC6
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0.500000000000000 + 0.866025403784438*I
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And annotates each face (here 1) of each tetrahedron with the
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corresponding generator (here, the inverse of the second generator)
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or 0 if the face is internal to the fundamental polyhedron::
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>>> F.mcomplex.Tetrahedra[0].GeneratorsInfo[simplex.F1]
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-2
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This information is also available in a dict keyed by generator.
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For each generator, it gives a list of the corresponding face pairing
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data (there might be multiple face pairings corresponding to the same
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generator). The face pairing data consists of a pair of t3mlite.Corner's
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indicating the paired faces as well as the permutation to take one
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face to the other.
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Here, for example, the generator corresponds to exactly one face
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pairing of face 2 of tet 1 to face 1 of tet0 such that face 2 is
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taken to face 1 by the permutation (3, 0, 1, 2)::
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>>> F.mcomplex.Generators[2]
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[((<F2 of tet1>, <F1 of tet0>), (3, 0, 1, 2))]
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The four vertices of tetrahedron 1::
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>>> for v in simplex.ZeroSubsimplices: # doctest: +NUMERIC6
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... F.mcomplex.Tetrahedra[1].Class[v].IdealPoint
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'Infinity'
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0.000000000000000
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0.866025403784439 - 0.500000000000000*I
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0.866025403784439 + 0.500000000000000*I
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The matrix for generator 1 (of the unsimplified presentation)::
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>>> F.mcomplex.GeneratorMatrices[1] # doctest: +NUMERIC6 +ELLIPSIS
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[ -0.577350269189626 - 1.00000000000000*I 0.500000000000000 + 0.288675134594813*I...]
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[ -0.500000000000000 - 0.288675134594813*I 0.577350269189626 + 2.22044604925031e-16*I...]
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Get the cusp that a vertex of the fundamental polyhedron corresponds
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to::
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>>> F.mcomplex.Tetrahedra[1].Class[simplex.V0].SubsimplexIndexInManifold
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0
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"""
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m = t3m.Mcomplex(manifold)
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f = FundamentalPolyhedronEngine(m)
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t = TransferKernelStructuresEngine(m, manifold)
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t.add_shapes(shapes)
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t.choose_and_transfer_generators(
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compute_corners=True, centroid_at_origin=False)
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f.unglue()
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if match_kernel:
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init_verts = f.init_vertices_kernel()
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else:
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init_verts = f.init_vertices()
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f.visit_tetrahedra_to_compute_vertices(
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m.ChooseGenInitialTet, init_verts)
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f.compute_matrices(normalize_matrices=normalize_matrices)
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return f
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def unglue(self):
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"""
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It will unglue all face-pairings corresponding to generators.
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What is left is a fundamental polyhedron.
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It assumes that GeneratorsInfo has been set (by the
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TranferKernelStructuresEngine).
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Besides ungluing, it will add the field Generators to the Mcomplex
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and SubsimplexIndexInManifold to each Vertex, Edge, Face, see
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examples in from_manifold_and_shapes.
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"""
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originalSubsimplexIndices = [
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[ tet.Class[subsimplex].Index for subsimplex in range(1, 15) ]
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for tet in self.mcomplex.Tetrahedra ]
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self.mcomplex.Generators = {}
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# Record for each generators what faces need to be unglued as well as
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# the permutations.
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for tet in self.mcomplex.Tetrahedra:
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for face in simplex.TwoSubsimplices:
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# Index of generator
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g = tet.GeneratorsInfo[face]
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# g == 0 does not correspond to a generator
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if g != 0:
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# Add to dictionary value
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l = self.mcomplex.Generators.setdefault(g, [])
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l.append(
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( (
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# Inbound face
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Corner(tet, face),
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# Outbound face
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Corner(tet.Neighbor[face], tet.Gluing[face].image(face))),
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# Permutation
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tet.Gluing[face]))
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# Unglue
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for g, pairings in self.mcomplex.Generators.items():
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# Unglue only once, ignore inverse
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if g > 0:
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for corners, perm in pairings:
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for corner in corners:
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corner.Tetrahedron.attach(corner.Subsimplex, None, None)
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# Rebuild the vertex classes, edge classes, ...
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self.mcomplex.rebuild()
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# Use the saved data to populate SubsimplexIndexInManifold
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for tet, o in zip(self.mcomplex.Tetrahedra, originalSubsimplexIndices):
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for subsimplex, index in enumerate(o):
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tet.Class[subsimplex + 1].SubsimplexIndexInManifold = index
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def visit_tetrahedra_to_compute_vertices(self, init_tet, init_vertices):
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"""
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Computes the positions of the vertices of fundamental polyhedron in
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the boundary of H^3, assuming the Mcomplex has been unglued and
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ShapeParameters were assigned to the tetrahedra.
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It starts by assigning the vertices of the given init_tet using
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init_vertices.
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"""
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for vertex in self.mcomplex.Vertices:
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vertex.IdealPoint = None
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for tet in self.mcomplex.Tetrahedra:
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tet.visited = False
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self.mcomplex.InitialTet = init_tet
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for v, idealPoint in init_vertices.items():
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init_tet.Class[v].IdealPoint = idealPoint
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init_tet.visited = True
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queue = [ init_tet ]
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while len(queue) > 0:
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tet = queue.pop(0)
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+
for F in simplex.TwoSubsimplices:
|
206
|
+
if bool(tet.Neighbor[F]) != bool(tet.GeneratorsInfo[F] == 0):
|
207
|
+
raise Exception(
|
208
|
+
"Improper fundamental domain, "
|
209
|
+
"probably a bug in unglue code")
|
210
|
+
|
211
|
+
S = tet.Neighbor[F]
|
212
|
+
if S and not S.visited:
|
213
|
+
perm = tet.Gluing[F]
|
214
|
+
for V in _VerticesInFace[F]:
|
215
|
+
vertex_class = S.Class[perm.image(V)]
|
216
|
+
if vertex_class.IdealPoint is None:
|
217
|
+
vertex_class.IdealPoint = tet.Class[V].IdealPoint
|
218
|
+
_compute_fourth_corner(S)
|
219
|
+
S.visited = True
|
220
|
+
queue.append(S)
|
221
|
+
|
222
|
+
def init_vertices(self):
|
223
|
+
"""
|
224
|
+
Computes vertices for the initial tetrahedron such that vertex 0, 1
|
225
|
+
and 2 are at Infinity, 0 and z.
|
226
|
+
"""
|
227
|
+
|
228
|
+
tet = self.mcomplex.ChooseGenInitialTet
|
229
|
+
|
230
|
+
z = tet.ShapeParameters[simplex.E01]
|
231
|
+
CF = z.parent()
|
232
|
+
|
233
|
+
return { simplex.V0 : Infinity,
|
234
|
+
simplex.V1 : CF(0),
|
235
|
+
simplex.V2 : CF(1),
|
236
|
+
simplex.V3 : z }
|
237
|
+
|
238
|
+
def init_vertices_kernel(self):
|
239
|
+
"""
|
240
|
+
Computes vertices for the initial tetrahedron matching the choices
|
241
|
+
made by the SnapPea kernel.
|
242
|
+
"""
|
243
|
+
|
244
|
+
# Note that initial_tetrahedron in choose_generators.c picks
|
245
|
+
# the initial tetrahedron and best edge in a purely combinatorial way -
|
246
|
+
# and doesn't use shapes to assign 0 and Infinity to the ends of
|
247
|
+
# the edges.
|
248
|
+
#
|
249
|
+
# Hence, the code below can't be tricked into picking a different
|
250
|
+
# permutation by setting the unverified shapes stored in the
|
251
|
+
# kernel Triangulation (to some non-sensical values). It would fail
|
252
|
+
# instead.
|
253
|
+
|
254
|
+
tet = self.mcomplex.ChooseGenInitialTet
|
255
|
+
|
256
|
+
candidates = []
|
257
|
+
|
258
|
+
for perm in Perm4.A4():
|
259
|
+
z = tet.ShapeParameters[perm.image(simplex.E01)]
|
260
|
+
# Complex field
|
261
|
+
CF = z.parent()
|
262
|
+
sqrt_z = z.sqrt()
|
263
|
+
sqrt_z_inv = CF(1) / sqrt_z
|
264
|
+
|
265
|
+
candidate = {
|
266
|
+
perm.image(simplex.V0) : Infinity,
|
267
|
+
perm.image(simplex.V1) : CF(0),
|
268
|
+
perm.image(simplex.V2) : sqrt_z_inv,
|
269
|
+
perm.image(simplex.V3) : sqrt_z
|
270
|
+
}
|
271
|
+
|
272
|
+
if _are_vertices_close_to_kernel(
|
273
|
+
candidate, tet.SnapPeaIdealVertices):
|
274
|
+
candidates.append(candidate)
|
275
|
+
|
276
|
+
if len(candidates) == 1:
|
277
|
+
return candidates[0]
|
278
|
+
|
279
|
+
raise Exception(
|
280
|
+
"Could not match vertices to vertices from SnapPea kernel")
|
281
|
+
|
282
|
+
def compute_matrices(self, normalize_matrices=False):
|
283
|
+
"""
|
284
|
+
Assuming positions were assigned to the vertices, adds
|
285
|
+
GeneratorMatrices to the Mcomplex which assigns a matrix to each
|
286
|
+
generator.
|
287
|
+
|
288
|
+
Compute generator matrices:
|
289
|
+
|
290
|
+
>>> M = Manifold("s776")
|
291
|
+
>>> F = FundamentalPolyhedronEngine.from_manifold_and_shapes(
|
292
|
+
... M, M.tetrahedra_shapes('rect'), normalize_matrices = True)
|
293
|
+
>>> generatorMatrices = F.mcomplex.GeneratorMatrices
|
294
|
+
|
295
|
+
Given a letter such as 'a' or 'A', return matrix for corresponding
|
296
|
+
generator:
|
297
|
+
|
298
|
+
>>> def letterToMatrix(l, generatorMatrices):
|
299
|
+
... g = ord(l.lower()) - ord('a') + 1
|
300
|
+
... if l.isupper():
|
301
|
+
... g = -g
|
302
|
+
... return generatorMatrices[g]
|
303
|
+
|
304
|
+
Check that relations are fulfilled up to sign:
|
305
|
+
|
306
|
+
>>> def p(L): return reduce(lambda x, y: x * y, L)
|
307
|
+
>>> def close_to_identity(m, epsilon = 1e-12):
|
308
|
+
... return abs(m[(0,0)] - 1) < epsilon and abs(m[(1,1)] - 1) < epsilon and abs(m[(0,1)]) < epsilon and abs(m[(1,0)]) < epsilon
|
309
|
+
>>> def close_to_pm_identity(m, epsilon = 1e-12):
|
310
|
+
... return close_to_identity(m, epsilon) or close_to_identity(-m, epsilon)
|
311
|
+
>>> G = M.fundamental_group(simplify_presentation = False)
|
312
|
+
>>> for rel in G.relators():
|
313
|
+
... close_to_pm_identity(p([letterToMatrix(l, generatorMatrices) for l in rel]))
|
314
|
+
True
|
315
|
+
True
|
316
|
+
True
|
317
|
+
True
|
318
|
+
|
319
|
+
"""
|
320
|
+
|
321
|
+
z = self.mcomplex.Tetrahedra[0].ShapeParameters[simplex.E01]
|
322
|
+
CF = z.parent()
|
323
|
+
|
324
|
+
self.mcomplex.GeneratorMatrices = { 0 : matrix([[CF(1), CF(0)],
|
325
|
+
[CF(0), CF(1)]]) }
|
326
|
+
|
327
|
+
for g, pairings in self.mcomplex.Generators.items():
|
328
|
+
# We compute the matrix for the generator and its inverse at the
|
329
|
+
# same time, so ignore inverses.
|
330
|
+
if g > 0:
|
331
|
+
m = _compute_pairing_matrix(pairings[0])
|
332
|
+
if normalize_matrices:
|
333
|
+
m = m / m.det().sqrt()
|
334
|
+
self.mcomplex.GeneratorMatrices[ g] = m
|
335
|
+
self.mcomplex.GeneratorMatrices[-g] = _adjoint2(m)
|
336
|
+
|
337
|
+
def matrices_for_presentation(self, G, match_kernel=False):
|
338
|
+
"""
|
339
|
+
Given the result of M.fundamental_group(...) where M is the
|
340
|
+
corresponding SnapPy.Manifold, return the matrices for that
|
341
|
+
presentation of the fundamental polyhedron.
|
342
|
+
|
343
|
+
The GeneratorMatrices computed here are for the face-pairing
|
344
|
+
presentation with respect to the fundamental polyhedron.
|
345
|
+
That presentation can be simplified by M.fundamental_group(...)
|
346
|
+
and this function will compute the matrices for the simplified
|
347
|
+
presentation from the GeneratorMatrices.
|
348
|
+
|
349
|
+
If match_kernel is True, it will flip the signs of some of
|
350
|
+
the matrices to match the ones in the given G (which were determined
|
351
|
+
by the SnapPea kernel).
|
352
|
+
|
353
|
+
This makes the result stable when changing precision (when normalizing
|
354
|
+
matrices with determinant -1, sqrt(-1) might jump between i and -i when
|
355
|
+
increasing precision).
|
356
|
+
"""
|
357
|
+
|
358
|
+
num_generators = len(self.mcomplex.GeneratorMatrices) // 2
|
359
|
+
matrices = [ self.mcomplex.GeneratorMatrices[g + 1]
|
360
|
+
for g in range(num_generators) ]
|
361
|
+
|
362
|
+
result = _perform_word_moves(matrices, G)
|
363
|
+
if match_kernel:
|
364
|
+
return _negate_matrices_to_match_kernel(result, G)
|
365
|
+
else:
|
366
|
+
return result
|
367
|
+
|
368
|
+
|
369
|
+
def _diff_to_kernel(value, snappeaValue):
|
370
|
+
"""
|
371
|
+
The SnapPea kernel will always give us a number, but we might deal
|
372
|
+
with a number or an interval.
|
373
|
+
|
374
|
+
Cast to our numeric type so that we can compare.
|
375
|
+
"""
|
376
|
+
CF = value.parent()
|
377
|
+
return value - CF(snappeaValue)
|
378
|
+
|
379
|
+
|
380
|
+
def _is_number_close_to_kernel(value, snappeaValue, error=10**-6):
|
381
|
+
CF = value.parent()
|
382
|
+
return abs(_diff_to_kernel(value, snappeaValue)) < CF(error)
|
383
|
+
|
384
|
+
|
385
|
+
def _is_vertex_close_to_kernel(vertex, snappeaVertex):
|
386
|
+
if vertex == Infinity or snappeaVertex == Infinity:
|
387
|
+
return vertex == snappeaVertex
|
388
|
+
return _is_number_close_to_kernel(vertex, snappeaVertex)
|
389
|
+
|
390
|
+
|
391
|
+
def _are_vertices_close_to_kernel(verts, snappeaVerts):
|
392
|
+
for key, vert in verts.items():
|
393
|
+
snappeaVert = snappeaVerts[key]
|
394
|
+
if not _is_vertex_close_to_kernel(vert, snappeaVert):
|
395
|
+
return False
|
396
|
+
return True
|
397
|
+
|
398
|
+
|
399
|
+
_RemainingFace = { (V0, V1): V3, (V0, V2): V1, (V0, V3): V2,
|
400
|
+
(V1, V0): V2, (V1, V2): V3, (V1, V3): V0,
|
401
|
+
(V2, V0): V3, (V2, V1): V0, (V2, V3): V1,
|
402
|
+
(V3, V0): V1, (V3, V1): V2, (V3, V2): V0}
|
403
|
+
|
404
|
+
|
405
|
+
def _compute_fourth_corner(T):
|
406
|
+
v = 4 * [ None ]
|
407
|
+
missing_corners = [V for V in ZeroSubsimplices if T.Class[V].IdealPoint is None]
|
408
|
+
if not missing_corners:
|
409
|
+
return
|
410
|
+
missing_corner = missing_corners[0]
|
411
|
+
|
412
|
+
v[3] = missing_corner
|
413
|
+
v[0] = ( [V for V in ZeroSubsimplices if T.Class[V].IdealPoint == Infinity] +
|
414
|
+
[V for V in ZeroSubsimplices if V != missing_corner])[0]
|
415
|
+
v[1], v[2] = _RemainingFace[ (v[3], v[0]) ], _RemainingFace[ (v[0], v[3]) ]
|
416
|
+
z = [T.Class[V].IdealPoint for V in v]
|
417
|
+
|
418
|
+
cross_ratio = T.ShapeParameters[ v[0] | v[1] ]
|
419
|
+
if z[0] == Infinity:
|
420
|
+
z[3] = z[1] + cross_ratio * (z[2] - z[1])
|
421
|
+
else:
|
422
|
+
diff20 = z[2] - z[0]
|
423
|
+
diff21 = z[2] - z[1]
|
424
|
+
numerator = (z[1]*diff20 - cross_ratio*(z[0]*diff21))
|
425
|
+
denominator = (diff20 - cross_ratio*diff21)
|
426
|
+
if abs(denominator) == 0 and abs(numerator) > 0:
|
427
|
+
z[3] = Infinity
|
428
|
+
else:
|
429
|
+
z[3] = numerator/denominator
|
430
|
+
|
431
|
+
T.Class[missing_corner].IdealPoint = z[3]
|
432
|
+
|
433
|
+
|
434
|
+
def _normalize_points(a, b):
|
435
|
+
"""
|
436
|
+
Reduce the number of cases involving infinity that we need to
|
437
|
+
consider.
|
438
|
+
|
439
|
+
In particular (assuming no degeneracy), a[0], a[1] and b[0] are
|
440
|
+
never infinite.
|
441
|
+
"""
|
442
|
+
a_infinities = [i for i, z in enumerate(a) if z == Infinity]
|
443
|
+
if len(a_infinities) > 0:
|
444
|
+
i = a_infinities[0]
|
445
|
+
a, b = a[i : ] + a[ : i], b[i : ] + b[ : i]
|
446
|
+
|
447
|
+
b_infinities = [i for i, z in enumerate(b) if z == Infinity]
|
448
|
+
if len(b_infinities) > 0:
|
449
|
+
i = b_infinities[0]
|
450
|
+
if a[0] != Infinity:
|
451
|
+
a, b = a[i : ] + a[ : i], b[i : ] + b[ : i]
|
452
|
+
else:
|
453
|
+
if i == 2:
|
454
|
+
a, b = [a[0], a[2], a[1]], [b[0], b[2], b[1]]
|
455
|
+
|
456
|
+
a.reverse(), b.reverse()
|
457
|
+
return a, b
|
458
|
+
|
459
|
+
|
460
|
+
def _matrix_taking_triple_to_triple(a, b):
|
461
|
+
"""
|
462
|
+
To quote Jeff:
|
463
|
+
|
464
|
+
The formula for the Moebius transformation taking the a[] to the b[]
|
465
|
+
is simple enough:
|
466
|
+
|
467
|
+
f(z) = [ (b1*k - b0) * z + (b0*a1 - b1*a0*k)] /
|
468
|
+
[ (k - 1) * z + (a1 - k*a0) ]
|
469
|
+
|
470
|
+
where
|
471
|
+
|
472
|
+
k = [(b2-b0)/(b2-b1)] * [(a2-a1)/(a2-a0)]
|
473
|
+
"""
|
474
|
+
# Let's make it so that a[0], a[1], and b[0] are never infinite
|
475
|
+
|
476
|
+
(a0, a1, a2), (b0, b1, b2) = _normalize_points(a,b)
|
477
|
+
|
478
|
+
ka = (a2 - a1)/(a2 - a0) if a2 != Infinity else 1
|
479
|
+
|
480
|
+
if b1 == Infinity:
|
481
|
+
kb, b1kb = 0, -(b2 - b0)
|
482
|
+
else:
|
483
|
+
kb = (b2 - b0)/(b2 - b1) if b2 != Infinity else 1
|
484
|
+
b1kb = b1 * kb
|
485
|
+
|
486
|
+
k = kb * ka
|
487
|
+
|
488
|
+
return matrix([(b1kb * ka - b0, b0 * a1 - a0 * b1kb * ka),
|
489
|
+
(k - 1, a1 - k * a0)])
|
490
|
+
|
491
|
+
|
492
|
+
def _adjoint2(m):
|
493
|
+
"""
|
494
|
+
Sage matrix.adjoint() produces an unnecessary large interval for
|
495
|
+
ComplexIntervalField entries.
|
496
|
+
"""
|
497
|
+
return matrix([[m[1, 1], -m[0, 1]], [-m[1, 0], m[0, 0]]])
|
498
|
+
|
499
|
+
|
500
|
+
def _perform_word_moves(matrices, G):
|
501
|
+
mats = [ None ] + matrices
|
502
|
+
moves = G._word_moves()
|
503
|
+
while moves:
|
504
|
+
a = moves.pop(0)
|
505
|
+
if a >= len(mats): # new generator added
|
506
|
+
n = moves.index(a) # end symbol location
|
507
|
+
word, moves = moves[:n], moves[n+1:]
|
508
|
+
mats.append( prod( [mats[g] if g > 0 else _adjoint2(mats[-g]) for g in word] ) )
|
509
|
+
else:
|
510
|
+
b = moves.pop(0)
|
511
|
+
if a == b: # generator removed
|
512
|
+
mats[a] = mats[-1]
|
513
|
+
mats = mats[:-1]
|
514
|
+
elif a == -b: # invert generator
|
515
|
+
mats[a] = _adjoint2(mats[a])
|
516
|
+
else: # handle slide
|
517
|
+
A, B = mats[abs(a)], mats[abs(b)]
|
518
|
+
if a*b < 0:
|
519
|
+
B = _adjoint2(B)
|
520
|
+
mats[abs(a)] = A*B if a > 0 else B*A
|
521
|
+
|
522
|
+
return mats[1 : G.num_generators() + 1]
|
523
|
+
|
524
|
+
|
525
|
+
def _matrix_L1_distance_to_kernel(m, snappeaM):
|
526
|
+
return sum([ abs(_diff_to_kernel(m[i,j], snappeaM[i,j]))
|
527
|
+
for i in range(2)
|
528
|
+
for j in range(2)])
|
529
|
+
|
530
|
+
|
531
|
+
def _negate_matrix_to_match_kernel(m, snappeaM):
|
532
|
+
diff_plus = _matrix_L1_distance_to_kernel(m, snappeaM)
|
533
|
+
|
534
|
+
diff_minus = _matrix_L1_distance_to_kernel(m, -snappeaM)
|
535
|
+
|
536
|
+
# Note that from an interval perspective, (not diff_plus < diff_minus)
|
537
|
+
# is not implying that diff_plus >= diff_minus and that "-m" is the
|
538
|
+
# "correct" answer.
|
539
|
+
# But both +m and -m are valid, we just try to heuristically match the
|
540
|
+
# choice that the SnapPea kernel made.
|
541
|
+
|
542
|
+
if diff_plus < diff_minus:
|
543
|
+
return m
|
544
|
+
else:
|
545
|
+
return -m
|
546
|
+
|
547
|
+
|
548
|
+
def _negate_matrices_to_match_kernel(matrices, G):
|
549
|
+
"""
|
550
|
+
Normalize things so the signs of the matices match SnapPy's default
|
551
|
+
This makes the representations stay close as one increases the precision.
|
552
|
+
"""
|
553
|
+
|
554
|
+
return [ _negate_matrix_to_match_kernel(m, matrix(G.SL2C(g)))
|
555
|
+
for m, g in zip(matrices, G.generators()) ]
|
556
|
+
|
557
|
+
|
558
|
+
def _compute_pairing_matrix(pairing):
|
559
|
+
(inCorner, outCorner), perm = pairing
|
560
|
+
|
561
|
+
inTriple = []
|
562
|
+
outTriple = []
|
563
|
+
|
564
|
+
for v in simplex.ZeroSubsimplices:
|
565
|
+
if simplex.is_subset(v, inCorner.Subsimplex):
|
566
|
+
inTriple.append(inCorner.Tetrahedron.Class[v].IdealPoint)
|
567
|
+
outTriple.append(outCorner.Tetrahedron.Class[perm.image(v)].IdealPoint)
|
568
|
+
|
569
|
+
return _matrix_taking_triple_to_triple(outTriple, inTriple)
|
@@ -0,0 +1,39 @@
|
|
1
|
+
"""
|
2
|
+
This has been moved to FundamentalPolyhedronEngine.
|
3
|
+
Only the testing code was left here.
|
4
|
+
|
5
|
+
Replicating how SnapPea finds the matrices of the geometric generators,
|
6
|
+
so that this can replicated using e.g. extended precision.
|
7
|
+
"""
|
8
|
+
|
9
|
+
from .fundamental_polyhedron import *
|
10
|
+
from . import t3mlite as t3m
|
11
|
+
from .t3mlite import ZeroSubsimplices
|
12
|
+
|
13
|
+
|
14
|
+
# Testing code
|
15
|
+
|
16
|
+
def matrix_norm(A):
|
17
|
+
return max(map(abs, A.list()))
|
18
|
+
|
19
|
+
|
20
|
+
def check_example(M, shapes=None):
|
21
|
+
e = fromManifoldAndShapes(M, shapes)
|
22
|
+
|
23
|
+
MM = e.mcomplex
|
24
|
+
max_error = 0
|
25
|
+
for T in MM:
|
26
|
+
for V in ZeroSubsimplices:
|
27
|
+
vs, vn = T.SnapPeaIdealVertices[V], T.IdealVertices[V]
|
28
|
+
if vn != vs:
|
29
|
+
max_error = max(max_error, abs(vs-vn))
|
30
|
+
|
31
|
+
G = M.fundamental_group(False, False, False)
|
32
|
+
mats = compute_matrices(MM)
|
33
|
+
for i in range(1, G.num_generators() + 1):
|
34
|
+
A = mats[i]
|
35
|
+
B = G.SL2C(G.generators()[i - 1])
|
36
|
+
error = min(matrix_norm(A - B), matrix_norm(A + B))
|
37
|
+
max_error = max(max_error, error)
|
38
|
+
|
39
|
+
return max_error
|
@@ -0,0 +1,81 @@
|
|
1
|
+
"""
|
2
|
+
Creating a group representation from shape *intervals*,
|
3
|
+
specifically elements of Sage's ComplexIntervalField. Also contains
|
4
|
+
some utility functions for dealing with such representations.
|
5
|
+
"""
|
6
|
+
|
7
|
+
from .polished_reps import ManifoldGroup
|
8
|
+
from .fundamental_polyhedron import *
|
9
|
+
|
10
|
+
# Most of the below small functions are not used in SnapPy proper, but
|
11
|
+
# published code (https://doi.org/10.7910/DVN/LCYXPO) depends on them,
|
12
|
+
# so they should not be removed.
|
13
|
+
|
14
|
+
|
15
|
+
def matrix_difference_norm(A, B):
|
16
|
+
B = B.change_ring(A.base_ring())
|
17
|
+
return max([abs(a - b) for a,b in zip(A.list(), B.list())])
|
18
|
+
|
19
|
+
|
20
|
+
def diameter(A):
|
21
|
+
return max(x.diameter() for x in A.list())
|
22
|
+
|
23
|
+
|
24
|
+
def contains_zero(A):
|
25
|
+
return all(x.contains_zero() for x in A.list())
|
26
|
+
|
27
|
+
|
28
|
+
def contains_one(A):
|
29
|
+
return contains_zero(A - 1)
|
30
|
+
|
31
|
+
|
32
|
+
def contains_plus_minus_one(A):
|
33
|
+
return contains_one(A) or contains_one(-A)
|
34
|
+
|
35
|
+
|
36
|
+
def could_be_equal_numbers(x, y):
|
37
|
+
return (x - y).contains_zero()
|
38
|
+
|
39
|
+
|
40
|
+
def could_be_equal(A, B):
|
41
|
+
return contains_zero(A - B)
|
42
|
+
|
43
|
+
|
44
|
+
def holonomy_from_shape_intervals(manifold, shape_intervals,
|
45
|
+
fundamental_group_args=[], lift_to_SL2=True):
|
46
|
+
"""
|
47
|
+
Returns the representation
|
48
|
+
|
49
|
+
rho: pi_1(manifold) -> (P)SL(2, ComplexIntervalField)
|
50
|
+
|
51
|
+
determined by the given shape_intervals. If shape_intervals
|
52
|
+
contains an exact solution z0 to the gluing equations with
|
53
|
+
corresponding holonomy representation rho0, then for all g the
|
54
|
+
ComplexIntervalField matrix rho(g) contains rho0(g)::
|
55
|
+
|
56
|
+
sage: M = Manifold('m004(1,2)')
|
57
|
+
sage: success, shapes = M.verify_hyperbolicity(bits_prec=53)
|
58
|
+
sage: success
|
59
|
+
True
|
60
|
+
sage: rho = holonomy_from_shape_intervals(M, shapes)
|
61
|
+
sage: (rho('a').det() - 1).contains_zero()
|
62
|
+
True
|
63
|
+
|
64
|
+
Of course, for long words the matrix entries will smear out::
|
65
|
+
|
66
|
+
sage: diameter(rho('a')).log10() # doctest: +NUMERIC0
|
67
|
+
-10.9576580520835
|
68
|
+
sage: diameter(rho(10*'abAB')).log10() # doctest: +NUMERIC0
|
69
|
+
-8.39987365046327
|
70
|
+
"""
|
71
|
+
|
72
|
+
M = manifold
|
73
|
+
G = M.fundamental_group(*fundamental_group_args)
|
74
|
+
f = FundamentalPolyhedronEngine.from_manifold_and_shapes(
|
75
|
+
M, shape_intervals, normalize_matrices=True)
|
76
|
+
mats = f.matrices_for_presentation(G, match_kernel=True)
|
77
|
+
PG = ManifoldGroup(G.generators(), G.relators(),
|
78
|
+
G.peripheral_curves(), mats)
|
79
|
+
if lift_to_SL2:
|
80
|
+
PG.lift_to_SL2C()
|
81
|
+
return PG
|