sequenzo 0.1.17__cp311-cp311-win_amd64.whl → 0.1.19__cp311-cp311-win_amd64.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of sequenzo might be problematic. Click here for more details.

Files changed (475) hide show
  1. sequenzo/__init__.py +64 -8
  2. sequenzo/big_data/clara/clara.py +1 -1
  3. sequenzo/big_data/clara/utils/get_weighted_diss.c +154 -154
  4. sequenzo/big_data/clara/utils/get_weighted_diss.cp311-win_amd64.pyd +0 -0
  5. sequenzo/clustering/KMedoids.py +39 -0
  6. sequenzo/clustering/clustering_c_code.cp311-win_amd64.pyd +0 -0
  7. sequenzo/clustering/hierarchical_clustering.py +304 -8
  8. sequenzo/define_sequence_data.py +44 -3
  9. sequenzo/dissimilarity_measures/c_code.cp311-win_amd64.pyd +0 -0
  10. sequenzo/dissimilarity_measures/get_distance_matrix.py +1 -2
  11. sequenzo/dissimilarity_measures/get_substitution_cost_matrix.py +1 -1
  12. sequenzo/dissimilarity_measures/src/DHDdistance.cpp +13 -37
  13. sequenzo/dissimilarity_measures/src/LCPdistance.cpp +13 -37
  14. sequenzo/dissimilarity_measures/src/OMdistance.cpp +12 -47
  15. sequenzo/dissimilarity_measures/src/OMspellDistance.cpp +103 -67
  16. sequenzo/dissimilarity_measures/src/dp_utils.h +160 -0
  17. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/common/xsimd_common_arithmetic.hpp +41 -16
  18. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/common/xsimd_common_complex.hpp +4 -0
  19. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/common/xsimd_common_details.hpp +7 -0
  20. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/common/xsimd_common_logical.hpp +10 -0
  21. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/common/xsimd_common_math.hpp +127 -43
  22. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/common/xsimd_common_memory.hpp +30 -2
  23. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/common/xsimd_common_swizzle.hpp +174 -0
  24. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/common/xsimd_common_trigo.hpp +14 -5
  25. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_avx.hpp +111 -54
  26. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_avx2.hpp +131 -9
  27. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_avx512bw.hpp +11 -113
  28. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_avx512dq.hpp +39 -7
  29. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_avx512f.hpp +336 -30
  30. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_avx512vbmi.hpp +9 -37
  31. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_avx512vbmi2.hpp +58 -0
  32. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_common.hpp +1 -0
  33. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_common_fwd.hpp +35 -2
  34. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_constants.hpp +3 -1
  35. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_emulated.hpp +17 -0
  36. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_fma3_avx.hpp +13 -0
  37. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_fma3_sse.hpp +18 -0
  38. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_fma4.hpp +13 -0
  39. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_isa.hpp +8 -0
  40. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_neon.hpp +363 -34
  41. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_neon64.hpp +7 -0
  42. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_rvv.hpp +13 -0
  43. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_scalar.hpp +41 -4
  44. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_sse2.hpp +252 -16
  45. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_sse3.hpp +9 -0
  46. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_ssse3.hpp +12 -1
  47. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_sve.hpp +7 -0
  48. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_vsx.hpp +892 -0
  49. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/arch/xsimd_wasm.hpp +78 -1
  50. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/config/xsimd_arch.hpp +3 -1
  51. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/config/xsimd_config.hpp +13 -2
  52. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/config/xsimd_cpuid.hpp +5 -0
  53. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/config/xsimd_inline.hpp +5 -1
  54. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/types/xsimd_all_registers.hpp +2 -0
  55. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/types/xsimd_api.hpp +64 -1
  56. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/types/xsimd_batch.hpp +36 -0
  57. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/types/xsimd_rvv_register.hpp +40 -31
  58. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/types/xsimd_traits.hpp +8 -0
  59. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/types/xsimd_vsx_register.hpp +77 -0
  60. sequenzo/dissimilarity_measures/src/xsimd/include/xsimd/xsimd.hpp +6 -0
  61. sequenzo/dissimilarity_measures/src/xsimd/test/test_basic_math.cpp +6 -0
  62. sequenzo/dissimilarity_measures/src/xsimd/test/test_batch.cpp +54 -2
  63. sequenzo/dissimilarity_measures/src/xsimd/test/test_batch_bool.cpp +8 -0
  64. sequenzo/dissimilarity_measures/src/xsimd/test/test_batch_cast.cpp +11 -4
  65. sequenzo/dissimilarity_measures/src/xsimd/test/test_batch_complex.cpp +18 -0
  66. sequenzo/dissimilarity_measures/src/xsimd/test/test_batch_int.cpp +8 -14
  67. sequenzo/dissimilarity_measures/src/xsimd/test/test_batch_manip.cpp +216 -173
  68. sequenzo/dissimilarity_measures/src/xsimd/test/test_load_store.cpp +6 -0
  69. sequenzo/dissimilarity_measures/src/xsimd/test/test_memory.cpp +1 -1
  70. sequenzo/dissimilarity_measures/src/xsimd/test/test_power.cpp +7 -4
  71. sequenzo/dissimilarity_measures/src/xsimd/test/test_select.cpp +6 -2
  72. sequenzo/dissimilarity_measures/src/xsimd/test/test_shuffle.cpp +32 -18
  73. sequenzo/dissimilarity_measures/src/xsimd/test/test_utils.hpp +21 -24
  74. sequenzo/dissimilarity_measures/src/xsimd/test/test_xsimd_api.cpp +69 -9
  75. sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.c +154 -154
  76. sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.cp311-win_amd64.pyd +0 -0
  77. sequenzo/dissimilarity_measures/utils/seqconc.c +154 -154
  78. sequenzo/dissimilarity_measures/utils/seqconc.cp311-win_amd64.pyd +0 -0
  79. sequenzo/dissimilarity_measures/utils/seqdss.c +154 -154
  80. sequenzo/dissimilarity_measures/utils/seqdss.cp311-win_amd64.pyd +0 -0
  81. sequenzo/dissimilarity_measures/utils/seqdur.c +154 -154
  82. sequenzo/dissimilarity_measures/utils/seqdur.cp311-win_amd64.pyd +0 -0
  83. sequenzo/dissimilarity_measures/utils/seqlength.c +154 -154
  84. sequenzo/dissimilarity_measures/utils/seqlength.cp311-win_amd64.pyd +0 -0
  85. sequenzo/multidomain/cat.py +0 -53
  86. sequenzo/multidomain/idcd.py +0 -1
  87. sequenzo/openmp_setup.py +233 -0
  88. sequenzo/sequence_characteristics/__init__.py +4 -0
  89. sequenzo/sequence_characteristics/complexity_index.py +17 -57
  90. sequenzo/sequence_characteristics/overall_cross_sectional_entropy.py +177 -111
  91. sequenzo/sequence_characteristics/plot_characteristics.py +30 -11
  92. sequenzo/sequence_characteristics/simple_characteristics.py +1 -0
  93. sequenzo/sequence_characteristics/state_frequencies_and_entropy_per_sequence.py +9 -3
  94. sequenzo/sequence_characteristics/turbulence.py +47 -67
  95. sequenzo/sequence_characteristics/variance_of_spell_durations.py +19 -9
  96. sequenzo/sequence_characteristics/within_sequence_entropy.py +5 -58
  97. sequenzo/visualization/plot_sequence_index.py +58 -35
  98. sequenzo/visualization/plot_state_distribution.py +57 -36
  99. sequenzo/visualization/plot_transition_matrix.py +21 -22
  100. sequenzo/with_event_history_analysis/__init__.py +35 -0
  101. sequenzo/with_event_history_analysis/sequence_analysis_multi_state_model.py +850 -0
  102. sequenzo/with_event_history_analysis/sequence_history_analysis.py +283 -0
  103. {sequenzo-0.1.17.dist-info → sequenzo-0.1.19.dist-info}/METADATA +48 -14
  104. sequenzo-0.1.19.dist-info/RECORD +272 -0
  105. sequenzo/dissimilarity_measures/setup.py +0 -35
  106. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Cholesky/LDLT.h +0 -688
  107. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Cholesky/LLT.h +0 -558
  108. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Cholesky/LLT_LAPACKE.h +0 -99
  109. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +0 -682
  110. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +0 -346
  111. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +0 -462
  112. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +0 -91
  113. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/EigenSolver.h +0 -622
  114. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +0 -418
  115. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +0 -226
  116. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +0 -374
  117. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +0 -158
  118. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/RealQZ.h +0 -657
  119. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/RealSchur.h +0 -558
  120. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +0 -77
  121. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +0 -904
  122. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +0 -87
  123. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +0 -561
  124. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/AlignedBox.h +0 -486
  125. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/AngleAxis.h +0 -247
  126. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/EulerAngles.h +0 -114
  127. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Homogeneous.h +0 -501
  128. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Hyperplane.h +0 -282
  129. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/OrthoMethods.h +0 -235
  130. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/ParametrizedLine.h +0 -232
  131. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Quaternion.h +0 -870
  132. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Rotation2D.h +0 -199
  133. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/RotationBase.h +0 -206
  134. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Scaling.h +0 -188
  135. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Transform.h +0 -1563
  136. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Translation.h +0 -202
  137. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Umeyama.h +0 -166
  138. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +0 -168
  139. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Householder/BlockHouseholder.h +0 -110
  140. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Householder/Householder.h +0 -176
  141. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Householder/HouseholderSequence.h +0 -545
  142. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +0 -226
  143. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +0 -212
  144. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +0 -229
  145. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +0 -394
  146. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +0 -453
  147. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +0 -444
  148. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +0 -198
  149. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +0 -117
  150. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Jacobi/Jacobi.h +0 -483
  151. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/KLUSupport/KLUSupport.h +0 -358
  152. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/Determinant.h +0 -117
  153. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/FullPivLU.h +0 -877
  154. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/InverseImpl.h +0 -432
  155. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/PartialPivLU.h +0 -624
  156. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/PartialPivLU_LAPACKE.h +0 -83
  157. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/arch/InverseSize4.h +0 -351
  158. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/MetisSupport/MetisSupport.h +0 -137
  159. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/OrderingMethods/Amd.h +0 -435
  160. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +0 -1863
  161. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/OrderingMethods/Ordering.h +0 -153
  162. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +0 -678
  163. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +0 -545
  164. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/ColPivHouseholderQR.h +0 -674
  165. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +0 -97
  166. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +0 -635
  167. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/FullPivHouseholderQR.h +0 -713
  168. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/HouseholderQR.h +0 -434
  169. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/HouseholderQR_LAPACKE.h +0 -68
  170. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +0 -335
  171. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/BDCSVD.h +0 -1366
  172. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/JacobiSVD.h +0 -812
  173. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/JacobiSVD_LAPACKE.h +0 -91
  174. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/SVDBase.h +0 -376
  175. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/UpperBidiagonalization.h +0 -414
  176. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +0 -697
  177. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +0 -174
  178. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/AmbiVector.h +0 -378
  179. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/CompressedStorage.h +0 -274
  180. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +0 -352
  181. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/MappedSparseMatrix.h +0 -67
  182. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseAssign.h +0 -270
  183. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseBlock.h +0 -571
  184. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseColEtree.h +0 -206
  185. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +0 -370
  186. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +0 -722
  187. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +0 -150
  188. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +0 -342
  189. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseDiagonalProduct.h +0 -138
  190. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseDot.h +0 -98
  191. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseFuzzy.h +0 -29
  192. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseMap.h +0 -305
  193. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseMatrix.h +0 -1518
  194. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +0 -398
  195. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparsePermutation.h +0 -178
  196. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseProduct.h +0 -181
  197. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseRedux.h +0 -49
  198. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseRef.h +0 -397
  199. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +0 -659
  200. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseSolverBase.h +0 -124
  201. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +0 -198
  202. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseTranspose.h +0 -92
  203. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseTriangularView.h +0 -189
  204. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseUtil.h +0 -186
  205. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseVector.h +0 -478
  206. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseView.h +0 -254
  207. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/TriangularSolver.h +0 -315
  208. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU.h +0 -923
  209. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLUImpl.h +0 -66
  210. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +0 -226
  211. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_Structs.h +0 -110
  212. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +0 -375
  213. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_Utils.h +0 -80
  214. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_column_bmod.h +0 -181
  215. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +0 -179
  216. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +0 -107
  217. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +0 -280
  218. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +0 -126
  219. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +0 -130
  220. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +0 -223
  221. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_panel_dfs.h +0 -258
  222. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_pivotL.h +0 -137
  223. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_pruneL.h +0 -136
  224. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_relax_snode.h +0 -83
  225. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseQR/SparseQR.h +0 -758
  226. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/StdDeque.h +0 -116
  227. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/StdList.h +0 -106
  228. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/StdVector.h +0 -131
  229. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/details.h +0 -84
  230. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +0 -1025
  231. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +0 -642
  232. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/Image.h +0 -82
  233. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/Kernel.h +0 -79
  234. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/RealSvd2x2.h +0 -55
  235. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/blas.h +0 -440
  236. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/lapack.h +0 -152
  237. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/lapacke.h +0 -16292
  238. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/lapacke_mangling.h +0 -17
  239. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +0 -358
  240. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +0 -696
  241. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/BlockMethods.h +0 -1442
  242. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h +0 -115
  243. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +0 -177
  244. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/IndexedViewMethods.h +0 -262
  245. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +0 -152
  246. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +0 -95
  247. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/ReshapedMethods.h +0 -149
  248. sequenzo/dissimilarity_measures/src/eigen/bench/BenchSparseUtil.h +0 -149
  249. sequenzo/dissimilarity_measures/src/eigen/bench/BenchTimer.h +0 -199
  250. sequenzo/dissimilarity_measures/src/eigen/bench/BenchUtil.h +0 -92
  251. sequenzo/dissimilarity_measures/src/eigen/bench/basicbenchmark.h +0 -63
  252. sequenzo/dissimilarity_measures/src/eigen/bench/btl/generic_bench/utils/utilities.h +0 -90
  253. sequenzo/dissimilarity_measures/src/eigen/bench/btl/libs/BLAS/blas.h +0 -675
  254. sequenzo/dissimilarity_measures/src/eigen/bench/btl/libs/BLAS/c_interface_base.h +0 -73
  255. sequenzo/dissimilarity_measures/src/eigen/bench/perf_monitoring/gemm_common.h +0 -67
  256. sequenzo/dissimilarity_measures/src/eigen/bench/perf_monitoring/gemv_common.h +0 -69
  257. sequenzo/dissimilarity_measures/src/eigen/bench/spbench/spbenchsolver.h +0 -573
  258. sequenzo/dissimilarity_measures/src/eigen/bench/spbench/spbenchstyle.h +0 -95
  259. sequenzo/dissimilarity_measures/src/eigen/bench/tensors/benchmark.h +0 -49
  260. sequenzo/dissimilarity_measures/src/eigen/bench/tensors/tensor_benchmarks.h +0 -597
  261. sequenzo/dissimilarity_measures/src/eigen/blas/BandTriangularSolver.h +0 -97
  262. sequenzo/dissimilarity_measures/src/eigen/blas/GeneralRank1Update.h +0 -44
  263. sequenzo/dissimilarity_measures/src/eigen/blas/PackedSelfadjointProduct.h +0 -53
  264. sequenzo/dissimilarity_measures/src/eigen/blas/PackedTriangularMatrixVector.h +0 -79
  265. sequenzo/dissimilarity_measures/src/eigen/blas/PackedTriangularSolverVector.h +0 -88
  266. sequenzo/dissimilarity_measures/src/eigen/blas/Rank2Update.h +0 -57
  267. sequenzo/dissimilarity_measures/src/eigen/blas/common.h +0 -175
  268. sequenzo/dissimilarity_measures/src/eigen/blas/f2c/datatypes.h +0 -24
  269. sequenzo/dissimilarity_measures/src/eigen/blas/level1_cplx_impl.h +0 -155
  270. sequenzo/dissimilarity_measures/src/eigen/blas/level1_impl.h +0 -144
  271. sequenzo/dissimilarity_measures/src/eigen/blas/level1_real_impl.h +0 -122
  272. sequenzo/dissimilarity_measures/src/eigen/blas/level2_cplx_impl.h +0 -360
  273. sequenzo/dissimilarity_measures/src/eigen/blas/level2_impl.h +0 -553
  274. sequenzo/dissimilarity_measures/src/eigen/blas/level2_real_impl.h +0 -306
  275. sequenzo/dissimilarity_measures/src/eigen/blas/level3_impl.h +0 -702
  276. sequenzo/dissimilarity_measures/src/eigen/debug/gdb/__init__.py +0 -1
  277. sequenzo/dissimilarity_measures/src/eigen/debug/gdb/printers.py +0 -314
  278. sequenzo/dissimilarity_measures/src/eigen/demos/mandelbrot/mandelbrot.h +0 -71
  279. sequenzo/dissimilarity_measures/src/eigen/demos/mix_eigen_and_c/binary_library.h +0 -71
  280. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/camera.h +0 -118
  281. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/gpuhelper.h +0 -207
  282. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/icosphere.h +0 -30
  283. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/quaternion_demo.h +0 -114
  284. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/trackball.h +0 -42
  285. sequenzo/dissimilarity_measures/src/eigen/lapack/lapack_common.h +0 -29
  286. sequenzo/dissimilarity_measures/src/eigen/scripts/relicense.py +0 -69
  287. sequenzo/dissimilarity_measures/src/eigen/test/AnnoyingScalar.h +0 -165
  288. sequenzo/dissimilarity_measures/src/eigen/test/MovableScalar.h +0 -35
  289. sequenzo/dissimilarity_measures/src/eigen/test/SafeScalar.h +0 -30
  290. sequenzo/dissimilarity_measures/src/eigen/test/bug1213.h +0 -8
  291. sequenzo/dissimilarity_measures/src/eigen/test/evaluator_common.h +0 -0
  292. sequenzo/dissimilarity_measures/src/eigen/test/gpu_common.h +0 -176
  293. sequenzo/dissimilarity_measures/src/eigen/test/main.h +0 -857
  294. sequenzo/dissimilarity_measures/src/eigen/test/packetmath_test_shared.h +0 -275
  295. sequenzo/dissimilarity_measures/src/eigen/test/product.h +0 -259
  296. sequenzo/dissimilarity_measures/src/eigen/test/random_without_cast_overflow.h +0 -152
  297. sequenzo/dissimilarity_measures/src/eigen/test/solverbase.h +0 -36
  298. sequenzo/dissimilarity_measures/src/eigen/test/sparse.h +0 -204
  299. sequenzo/dissimilarity_measures/src/eigen/test/sparse_solver.h +0 -699
  300. sequenzo/dissimilarity_measures/src/eigen/test/split_test_helper.h +0 -5994
  301. sequenzo/dissimilarity_measures/src/eigen/test/svd_common.h +0 -521
  302. sequenzo/dissimilarity_measures/src/eigen/test/svd_fill.h +0 -118
  303. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/Tensor.h +0 -554
  304. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorArgMax.h +0 -329
  305. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorAssign.h +0 -247
  306. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorBase.h +0 -1176
  307. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorBlock.h +0 -1559
  308. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorBroadcasting.h +0 -1093
  309. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorChipping.h +0 -518
  310. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorConcatenation.h +0 -377
  311. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContraction.h +0 -1023
  312. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionBlocking.h +0 -73
  313. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionCuda.h +0 -6
  314. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionGpu.h +0 -1413
  315. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionMapper.h +0 -575
  316. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionSycl.h +0 -1650
  317. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionThreadPool.h +0 -1679
  318. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorConversion.h +0 -456
  319. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorConvolution.h +0 -1132
  320. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorConvolutionSycl.h +0 -544
  321. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorCostModel.h +0 -214
  322. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorCustomOp.h +0 -347
  323. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDevice.h +0 -137
  324. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceCuda.h +0 -6
  325. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceDefault.h +0 -104
  326. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceGpu.h +0 -389
  327. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceSycl.h +0 -1048
  328. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceThreadPool.h +0 -409
  329. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDimensionList.h +0 -236
  330. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDimensions.h +0 -490
  331. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorEvalTo.h +0 -236
  332. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorEvaluator.h +0 -983
  333. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorExecutor.h +0 -703
  334. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorExpr.h +0 -388
  335. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorFFT.h +0 -669
  336. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorFixedSize.h +0 -379
  337. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorForcedEval.h +0 -237
  338. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorForwardDeclarations.h +0 -191
  339. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorFunctors.h +0 -488
  340. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorGenerator.h +0 -302
  341. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorGlobalFunctions.h +0 -33
  342. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorGpuHipCudaDefines.h +0 -99
  343. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorGpuHipCudaUndefines.h +0 -44
  344. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorIO.h +0 -79
  345. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorImagePatch.h +0 -603
  346. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorIndexList.h +0 -738
  347. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorInflation.h +0 -247
  348. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorInitializer.h +0 -82
  349. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorIntDiv.h +0 -263
  350. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorLayoutSwap.h +0 -216
  351. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorMacros.h +0 -98
  352. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorMap.h +0 -327
  353. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorMeta.h +0 -311
  354. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorMorphing.h +0 -1102
  355. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorPadding.h +0 -708
  356. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorPatch.h +0 -291
  357. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorRandom.h +0 -322
  358. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorReduction.h +0 -998
  359. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorReductionCuda.h +0 -6
  360. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorReductionGpu.h +0 -966
  361. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorReductionSycl.h +0 -582
  362. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorRef.h +0 -454
  363. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorReverse.h +0 -465
  364. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorScan.h +0 -528
  365. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorScanSycl.h +0 -513
  366. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorShuffling.h +0 -471
  367. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorStorage.h +0 -161
  368. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorStriding.h +0 -346
  369. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorTrace.h +0 -303
  370. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorTraits.h +0 -264
  371. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorUInt128.h +0 -249
  372. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorVolumePatch.h +0 -629
  373. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/TensorSymmetry/DynamicSymmetry.h +0 -293
  374. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/TensorSymmetry/StaticSymmetry.h +0 -236
  375. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/TensorSymmetry/Symmetry.h +0 -338
  376. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/TensorSymmetry/util/TemplateGroupTheory.h +0 -669
  377. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/Barrier.h +0 -67
  378. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/EventCount.h +0 -249
  379. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/NonBlockingThreadPool.h +0 -486
  380. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/RunQueue.h +0 -236
  381. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/ThreadCancel.h +0 -23
  382. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/ThreadEnvironment.h +0 -40
  383. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/ThreadLocal.h +0 -301
  384. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/ThreadPoolInterface.h +0 -48
  385. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/ThreadYield.h +0 -20
  386. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/util/CXX11Meta.h +0 -537
  387. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/util/CXX11Workarounds.h +0 -88
  388. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/util/EmulateArray.h +0 -261
  389. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/util/MaxSizeVector.h +0 -158
  390. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/AutoDiff/AutoDiffJacobian.h +0 -108
  391. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/AutoDiff/AutoDiffScalar.h +0 -730
  392. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/AutoDiff/AutoDiffVector.h +0 -220
  393. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/BVH/BVAlgorithms.h +0 -293
  394. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/BVH/KdBVH.h +0 -223
  395. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Eigenvalues/ArpackSelfAdjointEigenSolver.h +0 -790
  396. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/EulerAngles/EulerAngles.h +0 -355
  397. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/EulerAngles/EulerSystem.h +0 -305
  398. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/FFT/ei_fftw_impl.h +0 -261
  399. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/FFT/ei_kissfft_impl.h +0 -449
  400. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h +0 -187
  401. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/DGMRES.h +0 -511
  402. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/GMRES.h +0 -335
  403. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/IDRS.h +0 -436
  404. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/IncompleteLU.h +0 -90
  405. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/IterationController.h +0 -154
  406. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/MINRES.h +0 -267
  407. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/Scaling.h +0 -193
  408. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h +0 -305
  409. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/LevenbergMarquardt/LMcovar.h +0 -84
  410. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/LevenbergMarquardt/LMonestep.h +0 -202
  411. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/LevenbergMarquardt/LMpar.h +0 -160
  412. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/LevenbergMarquardt/LMqrsolv.h +0 -188
  413. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/LevenbergMarquardt/LevenbergMarquardt.h +0 -396
  414. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/MatrixExponential.h +0 -441
  415. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/MatrixFunction.h +0 -569
  416. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/MatrixLogarithm.h +0 -373
  417. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/MatrixPower.h +0 -705
  418. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/MatrixSquareRoot.h +0 -368
  419. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/StemFunction.h +0 -117
  420. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MoreVectorization/MathFunctions.h +0 -95
  421. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/HybridNonLinearSolver.h +0 -601
  422. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/LevenbergMarquardt.h +0 -657
  423. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/chkder.h +0 -66
  424. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/covar.h +0 -70
  425. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/dogleg.h +0 -107
  426. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/fdjac1.h +0 -79
  427. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/lmpar.h +0 -298
  428. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/qrsolv.h +0 -91
  429. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/r1mpyq.h +0 -30
  430. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/r1updt.h +0 -99
  431. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/rwupdt.h +0 -49
  432. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NumericalDiff/NumericalDiff.h +0 -130
  433. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Polynomials/Companion.h +0 -280
  434. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Polynomials/PolynomialSolver.h +0 -428
  435. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Polynomials/PolynomialUtils.h +0 -143
  436. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineInplaceLU.h +0 -352
  437. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineMatrix.h +0 -862
  438. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineMatrixBase.h +0 -212
  439. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineProduct.h +0 -295
  440. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineStorage.h +0 -259
  441. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineUtil.h +0 -89
  442. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/BlockOfDynamicSparseMatrix.h +0 -122
  443. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/BlockSparseMatrix.h +0 -1079
  444. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/DynamicSparseMatrix.h +0 -404
  445. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/MarketIO.h +0 -282
  446. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/MatrixMarketIterator.h +0 -247
  447. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/RandomSetter.h +0 -349
  448. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsArrayAPI.h +0 -286
  449. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsBFloat16.h +0 -68
  450. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsFunctors.h +0 -357
  451. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsHalf.h +0 -66
  452. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsImpl.h +0 -1959
  453. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsPacketMath.h +0 -118
  454. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/HipVectorCompatibility.h +0 -67
  455. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsArrayAPI.h +0 -167
  456. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsBFloat16.h +0 -58
  457. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsFunctors.h +0 -330
  458. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsHalf.h +0 -58
  459. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsImpl.h +0 -2045
  460. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsPacketMath.h +0 -79
  461. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/AVX/BesselFunctions.h +0 -46
  462. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/AVX/SpecialFunctions.h +0 -16
  463. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/AVX512/BesselFunctions.h +0 -46
  464. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/AVX512/SpecialFunctions.h +0 -16
  465. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/GPU/SpecialFunctions.h +0 -369
  466. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/NEON/BesselFunctions.h +0 -54
  467. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/NEON/SpecialFunctions.h +0 -34
  468. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Splines/Spline.h +0 -507
  469. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Splines/SplineFitting.h +0 -431
  470. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Splines/SplineFwd.h +0 -93
  471. sequenzo/dissimilarity_measures/src/eigen/unsupported/test/matrix_functions.h +0 -67
  472. sequenzo-0.1.17.dist-info/RECORD +0 -631
  473. {sequenzo-0.1.17.dist-info → sequenzo-0.1.19.dist-info}/WHEEL +0 -0
  474. {sequenzo-0.1.17.dist-info → sequenzo-0.1.19.dist-info}/licenses/LICENSE +0 -0
  475. {sequenzo-0.1.17.dist-info → sequenzo-0.1.19.dist-info}/top_level.txt +0 -0
@@ -531,6 +531,42 @@ namespace xsimd
531
531
  static_cast<int32_t>(wasm_f32x4_extract_lane(self, 3)));
532
532
  }
533
533
  }
534
+ // first
535
+ template <class A>
536
+ XSIMD_INLINE float first(batch<float, A> const& self, requires_arch<wasm>) noexcept
537
+ {
538
+ return wasm_f32x4_extract_lane(self, 0);
539
+ }
540
+ template <class A, class T, class = typename std::enable_if<std::is_integral<T>::value, void>::type>
541
+ XSIMD_INLINE T first(batch<T, A> const& self, requires_arch<wasm>) noexcept
542
+ {
543
+ XSIMD_IF_CONSTEXPR(sizeof(T) == 1)
544
+ {
545
+ return wasm_i8x16_extract_lane(self, 0);
546
+ }
547
+ else XSIMD_IF_CONSTEXPR(sizeof(T) == 2)
548
+ {
549
+ return wasm_i16x8_extract_lane(self, 0);
550
+ }
551
+ else XSIMD_IF_CONSTEXPR(sizeof(T) == 4)
552
+ {
553
+ return wasm_i32x4_extract_lane(self, 0);
554
+ }
555
+ else XSIMD_IF_CONSTEXPR(sizeof(T) == 8)
556
+ {
557
+ return wasm_i64x2_extract_lane(self, 0);
558
+ }
559
+ else
560
+ {
561
+ assert(false && "unsupported arch/op combination");
562
+ return {};
563
+ }
564
+ }
565
+ template <class A>
566
+ XSIMD_INLINE double first(batch<double, A> const& self, requires_arch<wasm>) noexcept
567
+ {
568
+ return wasm_f64x2_extract_lane(self, 0);
569
+ }
534
570
 
535
571
  // floor
536
572
  template <class A>
@@ -1170,7 +1206,7 @@ namespace xsimd
1170
1206
  }
1171
1207
  else
1172
1208
  {
1173
- return hadd(self, common {});
1209
+ return reduce_add(self, common {});
1174
1210
  }
1175
1211
  }
1176
1212
  template <class A>
@@ -1182,6 +1218,47 @@ namespace xsimd
1182
1218
  return wasm_f64x2_extract_lane(tmp2, 0);
1183
1219
  }
1184
1220
 
1221
+ // reduce_mul
1222
+ template <class A>
1223
+ XSIMD_INLINE float reduce_mul(batch<float, A> const& self, requires_arch<wasm>) noexcept
1224
+ {
1225
+ v128_t tmp0 = wasm_f32x4_mul(self, wasm_i32x4_shuffle(self, self, 6, 7, 2, 3));
1226
+ v128_t tmp1 = wasm_i32x4_shuffle(tmp0, tmp0, 1, 0, 4, 4);
1227
+ v128_t tmp2 = wasm_f32x4_mul(tmp0, tmp1);
1228
+ v128_t tmp3 = wasm_i32x4_shuffle(tmp0, tmp2, 4, 1, 2, 3);
1229
+ return wasm_f32x4_extract_lane(tmp3, 0);
1230
+ }
1231
+ template <class A, class T, class = typename std::enable_if<std::is_integral<T>::value, void>::type>
1232
+ XSIMD_INLINE T reduce_mul(batch<T, A> const& self, requires_arch<wasm>) noexcept
1233
+ {
1234
+ XSIMD_IF_CONSTEXPR(sizeof(T) == 4)
1235
+ {
1236
+ v128_t tmp0 = wasm_i32x4_shuffle(self, wasm_i32x4_splat(0), 2, 3, 0, 0);
1237
+ v128_t tmp1 = wasm_i32x4_mul(self, tmp0);
1238
+ v128_t tmp2 = wasm_i32x4_shuffle(tmp1, wasm_i32x4_splat(0), 1, 0, 0, 0);
1239
+ v128_t tmp3 = wasm_i32x4_mul(tmp1, tmp2);
1240
+ return wasm_i32x4_extract_lane(tmp3, 0);
1241
+ }
1242
+ else XSIMD_IF_CONSTEXPR(sizeof(T) == 8)
1243
+ {
1244
+ v128_t tmp0 = wasm_i32x4_shuffle(self, wasm_i32x4_splat(0), 2, 3, 0, 0);
1245
+ v128_t tmp1 = wasm_i64x2_mul(self, tmp0);
1246
+ return wasm_i64x2_extract_lane(tmp1, 0);
1247
+ }
1248
+ else
1249
+ {
1250
+ return reduce_mul(self, common {});
1251
+ }
1252
+ }
1253
+ template <class A>
1254
+ XSIMD_INLINE double reduce_mul(batch<double, A> const& self, requires_arch<wasm>) noexcept
1255
+ {
1256
+ v128_t tmp0 = wasm_i64x2_shuffle(self, self, 1, 3);
1257
+ v128_t tmp1 = wasm_f64x2_mul(self, tmp0);
1258
+ v128_t tmp2 = wasm_i64x2_shuffle(tmp0, tmp1, 2, 1);
1259
+ return wasm_f64x2_extract_lane(tmp2, 0);
1260
+ }
1261
+
1185
1262
  // rsqrt
1186
1263
  template <class A>
1187
1264
  XSIMD_INLINE batch<float, A> rsqrt(batch<float, A> const& self, requires_arch<wasm>) noexcept
@@ -169,14 +169,16 @@ namespace xsimd
169
169
  using all_sve_architectures = arch_list<detail::sve<512>, detail::sve<256>, detail::sve<128>>;
170
170
  using all_rvv_architectures = arch_list<detail::rvv<512>, detail::rvv<256>, detail::rvv<128>>;
171
171
  using all_arm_architectures = typename detail::join<all_sve_architectures, arch_list<i8mm<neon64>, neon64, neon>>::type;
172
+ using all_power_architectures = arch_list<vsx>;
172
173
  using all_riscv_architectures = all_rvv_architectures;
173
174
  using all_wasm_architectures = arch_list<wasm>;
174
- using all_architectures = typename detail::join<all_riscv_architectures, all_wasm_architectures, all_arm_architectures, all_x86_architectures>::type;
175
+ using all_architectures = typename detail::join<all_power_architectures, all_riscv_architectures, all_wasm_architectures, all_arm_architectures, all_x86_architectures>::type;
175
176
 
176
177
  using supported_architectures = typename detail::supported<all_architectures>::type;
177
178
 
178
179
  using x86_arch = typename detail::supported<all_x86_architectures>::type::best;
179
180
  using arm_arch = typename detail::supported<all_arm_architectures>::type::best;
181
+ using power_arch = typename detail::supported<all_power_architectures>::type::best;
180
182
  using riscv_arch = typename detail::supported<all_riscv_architectures>::type::best;
181
183
  using best_arch = typename supported_architectures::best;
182
184
 
@@ -408,6 +408,17 @@
408
408
  #define XSIMD_WITH_WASM 0
409
409
  #endif
410
410
 
411
+ /**
412
+ * @ingroup xsimd_config_macro
413
+ *
414
+ * Set to 1 if VMX with VSX extension is available at compile-time, to 0 otherwise.
415
+ */
416
+ #if defined(__VEC__) && defined(__VSX__)
417
+ #define XSIMD_WITH_VSX 1
418
+ #else
419
+ #define XSIMD_WITH_VSX 0
420
+ #endif
421
+
411
422
  // Workaround for MSVC compiler
412
423
  #ifdef _MSC_VER
413
424
 
@@ -459,14 +470,14 @@
459
470
 
460
471
  #endif
461
472
 
462
- #if XSIMD_WITH_SSE3 || defined(_M_AMD64) || defined(_M_X64) || (defined(_M_IX86_FP) && _M_IX86_FP >= 2)
473
+ #if XSIMD_WITH_SSE3 || ((defined(_M_AMD64) || defined(_M_X64)) && !defined(_M_ARM64EC)) || (defined(_M_IX86_FP) && _M_IX86_FP >= 2)
463
474
  #undef XSIMD_WITH_SSE2
464
475
  #define XSIMD_WITH_SSE2 1
465
476
  #endif
466
477
 
467
478
  #endif
468
479
 
469
- #if !XSIMD_WITH_SSE2 && !XSIMD_WITH_SSE3 && !XSIMD_WITH_SSSE3 && !XSIMD_WITH_SSE4_1 && !XSIMD_WITH_SSE4_2 && !XSIMD_WITH_AVX && !XSIMD_WITH_AVX2 && !XSIMD_WITH_AVXVNNI && !XSIMD_WITH_FMA3_SSE && !XSIMD_WITH_FMA4 && !XSIMD_WITH_FMA3_AVX && !XSIMD_WITH_FMA3_AVX2 && !XSIMD_WITH_AVX512F && !XSIMD_WITH_AVX512CD && !XSIMD_WITH_AVX512DQ && !XSIMD_WITH_AVX512BW && !XSIMD_WITH_AVX512ER && !XSIMD_WITH_AVX512PF && !XSIMD_WITH_AVX512IFMA && !XSIMD_WITH_AVX512VBMI && !XSIMD_WITH_AVX512VBMI2 && !XSIMD_WITH_NEON && !XSIMD_WITH_NEON64 && !XSIMD_WITH_SVE && !XSIMD_WITH_RVV && !XSIMD_WITH_WASM
480
+ #if !XSIMD_WITH_SSE2 && !XSIMD_WITH_SSE3 && !XSIMD_WITH_SSSE3 && !XSIMD_WITH_SSE4_1 && !XSIMD_WITH_SSE4_2 && !XSIMD_WITH_AVX && !XSIMD_WITH_AVX2 && !XSIMD_WITH_AVXVNNI && !XSIMD_WITH_FMA3_SSE && !XSIMD_WITH_FMA4 && !XSIMD_WITH_FMA3_AVX && !XSIMD_WITH_FMA3_AVX2 && !XSIMD_WITH_AVX512F && !XSIMD_WITH_AVX512CD && !XSIMD_WITH_AVX512DQ && !XSIMD_WITH_AVX512BW && !XSIMD_WITH_AVX512ER && !XSIMD_WITH_AVX512PF && !XSIMD_WITH_AVX512IFMA && !XSIMD_WITH_AVX512VBMI && !XSIMD_WITH_AVX512VBMI2 && !XSIMD_WITH_NEON && !XSIMD_WITH_NEON64 && !XSIMD_WITH_SVE && !XSIMD_WITH_RVV && !XSIMD_WITH_WASM && !XSIMD_WITH_VSX && !XSIMD_WITH_EMULATED
470
481
  #define XSIMD_NO_SUPPORTED_ARCHITECTURE
471
482
  #endif
472
483
 
@@ -84,6 +84,7 @@ namespace xsimd
84
84
  ARCH_FIELD_EX_REUSE(detail::rvv<256>, rvv)
85
85
  ARCH_FIELD_EX_REUSE(detail::rvv<128>, rvv)
86
86
  ARCH_FIELD(wasm)
87
+ ARCH_FIELD(vsx)
87
88
 
88
89
  #undef ARCH_FIELD
89
90
 
@@ -95,6 +96,10 @@ namespace xsimd
95
96
  wasm = 1;
96
97
  #endif
97
98
 
99
+ #if XSIMD_WITH_VSX
100
+ vsx = 1;
101
+ #endif
102
+
98
103
  #if defined(__aarch64__) || defined(_M_ARM64)
99
104
  neon = 1;
100
105
  neon64 = 1;
@@ -12,8 +12,12 @@
12
12
  #ifndef XSIMD_INLINE_HPP
13
13
  #define XSIMD_INLINE_HPP
14
14
 
15
- #if defined(__GNUC__)
15
+ #if defined(__VEC__)
16
+ #define XSIMD_INLINE inline
17
+ #elif defined __has_attribute
18
+ #if __has_attribute(always_inline)
16
19
  #define XSIMD_INLINE inline __attribute__((always_inline))
20
+ #endif
17
21
  #elif defined(_MSC_VER)
18
22
  #define XSIMD_INLINE inline __forceinline
19
23
  #else
@@ -48,6 +48,8 @@
48
48
 
49
49
  #include "xsimd_wasm_register.hpp"
50
50
 
51
+ #include "xsimd_vsx_register.hpp"
52
+
51
53
  #if XSIMD_WITH_EMULATED
52
54
  #include "xsimd_emulated_register.hpp"
53
55
  #endif
@@ -373,6 +373,12 @@ namespace xsimd
373
373
  detail::static_check_supported_config<T, A>();
374
374
  return kernel::bitwise_lshift<A>(x, shift, A {});
375
375
  }
376
+ template <size_t shift, class T, class A>
377
+ XSIMD_INLINE batch<T, A> bitwise_lshift(batch<T, A> const& x) noexcept
378
+ {
379
+ detail::static_check_supported_config<T, A>();
380
+ return kernel::bitwise_lshift<shift, A>(x, A {});
381
+ }
376
382
 
377
383
  /**
378
384
  * @ingroup batch_bitwise
@@ -452,6 +458,12 @@ namespace xsimd
452
458
  detail::static_check_supported_config<T, A>();
453
459
  return kernel::bitwise_rshift<A>(x, shift, A {});
454
460
  }
461
+ template <size_t shift, class T, class A>
462
+ XSIMD_INLINE batch<T, A> bitwise_rshift(batch<T, A> const& x) noexcept
463
+ {
464
+ detail::static_check_supported_config<T, A>();
465
+ return kernel::bitwise_rshift<shift, A>(x, A {});
466
+ }
455
467
 
456
468
  /**
457
469
  * @ingroup batch_bitwise
@@ -635,7 +647,7 @@ namespace xsimd
635
647
  }
636
648
 
637
649
  /**
638
- * @ingroup batch_reducers
650
+ * @ingroup batch_bool_reducers
639
651
  *
640
652
  * Count the number of values set to true in the batch \c x
641
653
  * @param x boolean or batch of boolean
@@ -991,6 +1003,21 @@ namespace xsimd
991
1003
  return kernel::fnms<A>(x, y, z, A {});
992
1004
  }
993
1005
 
1006
+ /**
1007
+ * @ingroup batch_arithmetic
1008
+ *
1009
+ * Computes <tt>-(x*y) - z</tt> in a single instruction when possible.
1010
+ * @param x a batch of integer or floating point values.
1011
+ * @param y a batch of integer or floating point values.
1012
+ * @param z a batch of integer or floating point values.
1013
+ * @return a batch where each even-indexed element is computed as <tt>x * y - z</tt> and each odd-indexed element as <tt>x * y + z</tt>
1014
+ */
1015
+ template <class T, class A>
1016
+ XSIMD_INLINE batch<T, A> fmas(batch<T, A> const& x, batch<T, A> const& y, batch<T, A> const& z) noexcept
1017
+ {
1018
+ detail::static_check_supported_config<T, A>();
1019
+ return kernel::fmas<A>(x, y, z, A {});
1020
+ }
994
1021
  /**
995
1022
  * @ingroup batch_fp
996
1023
  *
@@ -1114,6 +1141,7 @@ namespace xsimd
1114
1141
  return kernel::incr_if<A>(x, mask, A {});
1115
1142
  }
1116
1143
 
1144
+ #ifndef __FAST_MATH__
1117
1145
  /**
1118
1146
  * @ingroup batch_constant
1119
1147
  *
@@ -1128,6 +1156,7 @@ namespace xsimd
1128
1156
  detail::static_check_supported_config<T, A>();
1129
1157
  return B(std::numeric_limits<T>::infinity());
1130
1158
  }
1159
+ #endif
1131
1160
 
1132
1161
  /**
1133
1162
  * @ingroup batch_data_transfer
@@ -1862,6 +1891,20 @@ namespace xsimd
1862
1891
  return kernel::reduce_min<A>(x, A {});
1863
1892
  }
1864
1893
 
1894
+ /**
1895
+ * @ingroup batch_reducers
1896
+ *
1897
+ * Multiplies of all the scalars of the batch \c x.
1898
+ * @param x batch involved in the reduction
1899
+ * @return the result of the reduction.
1900
+ */
1901
+ template <class T, class A>
1902
+ XSIMD_INLINE T reduce_mul(batch<T, A> const& x) noexcept
1903
+ {
1904
+ detail::static_check_supported_config<T, A>();
1905
+ return kernel::reduce_mul<A>(x, A {});
1906
+ }
1907
+
1865
1908
  /**
1866
1909
  * @ingroup batch_math
1867
1910
  *
@@ -1949,6 +1992,12 @@ namespace xsimd
1949
1992
  detail::static_check_supported_config<T, A>();
1950
1993
  return kernel::rotl<A>(x, shift, A {});
1951
1994
  }
1995
+ template <size_t count, class T, class A>
1996
+ XSIMD_INLINE batch<T, A> rotl(batch<T, A> const& x) noexcept
1997
+ {
1998
+ detail::static_check_supported_config<T, A>();
1999
+ return kernel::rotl<count, A>(x, A {});
2000
+ }
1952
2001
 
1953
2002
  /**
1954
2003
  * @ingroup batch_bitwise
@@ -1971,6 +2020,12 @@ namespace xsimd
1971
2020
  detail::static_check_supported_config<T, A>();
1972
2021
  return kernel::rotr<A>(x, shift, A {});
1973
2022
  }
2023
+ template <size_t count, class T, class A>
2024
+ XSIMD_INLINE batch<T, A> rotr(batch<T, A> const& x) noexcept
2025
+ {
2026
+ detail::static_check_supported_config<T, A>();
2027
+ return kernel::rotr<count, A>(x, A {});
2028
+ }
1974
2029
 
1975
2030
  /**
1976
2031
  * @ingroup batch_rounding
@@ -2107,6 +2162,7 @@ namespace xsimd
2107
2162
  shuffle(batch<T, A> const& x, batch<T, A> const& y, batch_constant<Vt, A, Values...> mask) noexcept
2108
2163
  {
2109
2164
  static_assert(sizeof(T) == sizeof(Vt), "consistent mask");
2165
+ static_assert(std::is_unsigned<Vt>::value, "mask must hold unsigned indices");
2110
2166
  detail::static_check_supported_config<T, A>();
2111
2167
  return kernel::shuffle<A>(x, y, mask, A {});
2112
2168
  }
@@ -2188,6 +2244,9 @@ namespace xsimd
2188
2244
  * Slide the whole batch to the left by \c n bytes. This is different from
2189
2245
  * \c bitwise_lshift that shifts each batch element to the left.
2190
2246
  *
2247
+ * @warning The behavior of this function is platform-dependent on big
2248
+ * endian architectures.
2249
+ *
2191
2250
  * @tparam N Amount of bytes to slide to the left.
2192
2251
  * @param x batch of integer values.
2193
2252
  * @return slided batch.
@@ -2206,6 +2265,9 @@ namespace xsimd
2206
2265
  * Slide the whole batch to the right by \c N bytes. This is different from
2207
2266
  * \c bitwise_rshift that shifts each batch element to the right.
2208
2267
  *
2268
+ * @warning The behavior of this function is platform-dependent on big
2269
+ * endian architectures.
2270
+ *
2209
2271
  * @tparam N Amount of bytes to slide to the right.
2210
2272
  * @param x batch of integer values.
2211
2273
  * @return slided batch.
@@ -2416,6 +2478,7 @@ namespace xsimd
2416
2478
  XSIMD_INLINE batch<std::complex<T>, A> swizzle(batch<std::complex<T>, A> const& x, batch_constant<Vt, A, Values...> mask) noexcept
2417
2479
  {
2418
2480
  static_assert(sizeof(T) == sizeof(Vt), "consistent mask");
2481
+ static_assert(std::is_unsigned<Vt>::value, "mask must hold unsigned indices");
2419
2482
  detail::static_check_supported_config<T, A>();
2420
2483
  return kernel::swizzle<A>(x, mask, A {});
2421
2484
  }
@@ -159,6 +159,8 @@ namespace xsimd
159
159
 
160
160
  XSIMD_INLINE T get(std::size_t i) const noexcept;
161
161
 
162
+ XSIMD_INLINE T first() const noexcept;
163
+
162
164
  // comparison operators. Defined as friend to enable automatic
163
165
  // conversion of parameters from scalar to batch, at the cost of using a
164
166
  // proxy implementation from details::.
@@ -271,8 +273,10 @@ namespace xsimd
271
273
  XSIMD_INLINE batch logical_or(batch const& other) const noexcept;
272
274
  };
273
275
 
276
+ #if __cplusplus < 201703L
274
277
  template <class T, class A>
275
278
  constexpr std::size_t batch<T, A>::size;
279
+ #endif
276
280
 
277
281
  /**
278
282
  * @brief batch of predicate over scalar or complex values.
@@ -314,6 +318,8 @@ namespace xsimd
314
318
 
315
319
  XSIMD_INLINE bool get(std::size_t i) const noexcept;
316
320
 
321
+ XSIMD_INLINE bool first() const noexcept;
322
+
317
323
  // mask operations
318
324
  XSIMD_INLINE uint64_t mask() const noexcept;
319
325
  XSIMD_INLINE static batch_bool from_mask(uint64_t mask) noexcept;
@@ -344,8 +350,10 @@ namespace xsimd
344
350
  static XSIMD_INLINE register_type make_register(detail::index_sequence<>, V... v) noexcept;
345
351
  };
346
352
 
353
+ #if __cplusplus < 201703L
347
354
  template <class T, class A>
348
355
  constexpr std::size_t batch_bool<T, A>::size;
356
+ #endif
349
357
 
350
358
  /**
351
359
  * @brief batch of complex values.
@@ -405,6 +413,8 @@ namespace xsimd
405
413
 
406
414
  XSIMD_INLINE value_type get(std::size_t i) const noexcept;
407
415
 
416
+ XSIMD_INLINE value_type first() const noexcept;
417
+
408
418
  #ifdef XSIMD_ENABLE_XTL_COMPLEX
409
419
  // xtl-related methods
410
420
  template <bool i3ec>
@@ -476,8 +486,10 @@ namespace xsimd
476
486
  real_batch m_imag;
477
487
  };
478
488
 
489
+ #if __cplusplus < 201703L
479
490
  template <class T, class A>
480
491
  constexpr std::size_t batch<std::complex<T>, A>::size;
492
+ #endif
481
493
 
482
494
  #ifdef XSIMD_ENABLE_XTL_COMPLEX
483
495
  template <typename T, bool i3ec, typename A>
@@ -693,6 +705,16 @@ namespace xsimd
693
705
  return kernel::get(*this, i, A {});
694
706
  }
695
707
 
708
+ /**
709
+ * Retrieve the first scalar element in this batch.
710
+ */
711
+ template <class T, class A>
712
+ XSIMD_INLINE T batch<T, A>::first() const noexcept
713
+ {
714
+ detail::static_check_supported_config<T, A>();
715
+ return kernel::first(*this, A {});
716
+ }
717
+
696
718
  /******************************
697
719
  * batch comparison operators *
698
720
  ******************************/
@@ -1005,6 +1027,13 @@ namespace xsimd
1005
1027
  return kernel::get(*this, i, A {});
1006
1028
  }
1007
1029
 
1030
+ template <class T, class A>
1031
+ XSIMD_INLINE bool batch_bool<T, A>::first() const noexcept
1032
+ {
1033
+ detail::static_check_supported_config<T, A>();
1034
+ return kernel::first(*this, A {});
1035
+ }
1036
+
1008
1037
  /***********************************
1009
1038
  * batch_bool comparison operators *
1010
1039
  ***********************************/
@@ -1248,6 +1277,13 @@ namespace xsimd
1248
1277
  return kernel::get(*this, i, A {});
1249
1278
  }
1250
1279
 
1280
+ template <class T, class A>
1281
+ XSIMD_INLINE auto batch<std::complex<T>, A>::first() const noexcept -> value_type
1282
+ {
1283
+ detail::static_check_supported_config<std::complex<T>, A>();
1284
+ return kernel::first(*this, A {});
1285
+ }
1286
+
1251
1287
  /**************************************
1252
1288
  * batch<complex> xtl-related methods *
1253
1289
  **************************************/
@@ -62,9 +62,12 @@ namespace xsimd
62
62
  static constexpr size_t rvv_width_mf4 = XSIMD_RVV_BITS / 4;
63
63
  static constexpr size_t rvv_width_mf2 = XSIMD_RVV_BITS / 2;
64
64
  static constexpr size_t rvv_width_m1 = XSIMD_RVV_BITS;
65
- static constexpr size_t rvv_width_m2 = XSIMD_RVV_BITS * 2;
66
- static constexpr size_t rvv_width_m4 = XSIMD_RVV_BITS * 4;
67
- static constexpr size_t rvv_width_m8 = XSIMD_RVV_BITS * 8;
65
+
66
+ // Cope with gcc limitation, see https://gcc.gnu.org/bugzilla/show_bug.cgi?id=116484
67
+ #define XSIMD_RVV_WIDTH_MF8 (XSIMD_RVV_BITS / 8)
68
+ #define XSIMD_RVV_WIDTH_MF4 (XSIMD_RVV_BITS / 4)
69
+ #define XSIMD_RVV_WIDTH_MF2 (XSIMD_RVV_BITS / 2)
70
+ #define XSIMD_RVV_WIDTH_M1 XSIMD_RVV_BITS
68
71
 
69
72
  // rvv_type_info is a utility class to convert scalar type and
70
73
  // bitwidth into rvv register types.
@@ -79,30 +82,30 @@ namespace xsimd
79
82
  //
80
83
  template <class T, size_t Width>
81
84
  struct rvv_type_info;
82
- #define XSIMD_RVV_MAKE_TYPE(scalar, t, s, vmul) \
83
- template <> \
84
- struct rvv_type_info<scalar, rvv_width_m1 * vmul> \
85
- { \
86
- static constexpr size_t width = rvv_width_m1 * vmul; \
87
- using type = XSIMD_RVV_TYPE(t, s, vmul); \
88
- using byte_type = XSIMD_RVV_TYPE(u, 8, vmul); \
89
- using fixed_type = type __attribute__((riscv_rvv_vector_bits(width))); \
90
- template <class U> \
91
- static XSIMD_INLINE type bitcast(U x) noexcept \
92
- { \
93
- const auto words = XSIMD_RVV_JOINT5(__riscv_vreinterpret_, u, s, m, vmul)(x); \
94
- return XSIMD_RVV_JOINT5(__riscv_vreinterpret_, t, s, m, vmul)(words); \
95
- } \
96
- template <> \
97
- XSIMD_INLINE type bitcast<type>(type x) noexcept { return x; } \
98
- template <class U> \
99
- static XSIMD_INLINE byte_type as_bytes(U x) noexcept \
100
- { \
101
- static_assert(std::is_same<U, type>::value, "inconsistent conversion types"); \
102
- const auto words = XSIMD_RVV_JOINT5(__riscv_vreinterpret_, u, s, m, vmul)(x); \
103
- return XSIMD_RVV_JOINT5(__riscv_vreinterpret_, u, 8, m, vmul)(words); \
104
- } \
105
- };
85
+ #define XSIMD_RVV_MAKE_TYPE(scalar, t, s, vmul) \
86
+ template <> \
87
+ struct rvv_type_info<scalar, rvv_width_m1 * vmul> \
88
+ { \
89
+ static constexpr size_t width = rvv_width_m1 * vmul; \
90
+ using type = XSIMD_RVV_TYPE(t, s, vmul); \
91
+ using byte_type = XSIMD_RVV_TYPE(u, 8, vmul); \
92
+ using fixed_type = type __attribute__((riscv_rvv_vector_bits(/*width=*/XSIMD_RVV_WIDTH_M1 * vmul))); \
93
+ template <class U> \
94
+ static XSIMD_INLINE type bitcast(U x) noexcept \
95
+ { \
96
+ const auto words = XSIMD_RVV_JOINT5(__riscv_vreinterpret_, u, s, m, vmul)(x); \
97
+ return XSIMD_RVV_JOINT5(__riscv_vreinterpret_, t, s, m, vmul)(words); \
98
+ } \
99
+ template <class U> \
100
+ static XSIMD_INLINE byte_type as_bytes(U x) noexcept \
101
+ { \
102
+ static_assert(std::is_same<U, type>::value, "inconsistent conversion types"); \
103
+ const auto words = XSIMD_RVV_JOINT5(__riscv_vreinterpret_, u, s, m, vmul)(x); \
104
+ return XSIMD_RVV_JOINT5(__riscv_vreinterpret_, u, 8, m, vmul)(words); \
105
+ } \
106
+ }; \
107
+ template <> \
108
+ XSIMD_INLINE XSIMD_RVV_TYPE(t, s, vmul) rvv_type_info<scalar, rvv_width_m1 * vmul>::bitcast<XSIMD_RVV_TYPE(t, s, vmul)>(XSIMD_RVV_TYPE(t, s, vmul) x) noexcept { return x; }
106
109
 
107
110
  #define XSIMD_RVV_MAKE_TYPES(vmul) \
108
111
  XSIMD_RVV_MAKE_TYPE(int8_t, i, 8, vmul) \
@@ -235,17 +238,17 @@ namespace xsimd
235
238
  template <>
236
239
  struct semitype<2>
237
240
  {
238
- using type = vuint8mf2_t __attribute__((riscv_rvv_vector_bits(rvv_width_mf2)));
241
+ using type = vuint8mf2_t __attribute__((riscv_rvv_vector_bits(XSIMD_RVV_WIDTH_MF2)));
239
242
  };
240
243
  template <>
241
244
  struct semitype<4>
242
245
  {
243
- using type = vuint8mf4_t __attribute__((riscv_rvv_vector_bits(rvv_width_mf4)));
246
+ using type = vuint8mf4_t __attribute__((riscv_rvv_vector_bits(XSIMD_RVV_WIDTH_MF4)));
244
247
  };
245
248
  template <>
246
249
  struct semitype<8>
247
250
  {
248
- using type = vuint8mf8_t __attribute__((riscv_rvv_vector_bits(rvv_width_mf8)));
251
+ using type = vuint8mf8_t __attribute__((riscv_rvv_vector_bits(XSIMD_RVV_WIDTH_MF8)));
249
252
  };
250
253
  using fixed_type = typename semitype<divisor>::type;
251
254
  using super::as_bytes;
@@ -374,7 +377,7 @@ namespace xsimd
374
377
  struct rvv_bool
375
378
  {
376
379
  using bool_info = rvv_bool_info<rvv_width_m1 * sizeof(T) * 8 / Width>;
377
- using storage_type = vuint8m1_t __attribute__((riscv_rvv_vector_bits(rvv_width_m1)));
380
+ using storage_type = vuint8m1_t __attribute__((riscv_rvv_vector_bits(XSIMD_RVV_WIDTH_M1)));
378
381
  using type = typename bool_info::type;
379
382
  storage_type value;
380
383
  rvv_bool() = default;
@@ -489,6 +492,12 @@ namespace xsimd
489
492
  using type = detail::rvv_bool_simd_register<T>;
490
493
  };
491
494
  } // namespace types
495
+
496
+ #undef XSIMD_RVV_WIDTH_MF8
497
+ #undef XSIMD_RVV_WIDTH_MF4
498
+ #undef XSIMD_RVV_WIDTH_MF2
499
+ #undef XSIMD_RVV_WIDTH_M1
500
+
492
501
  #else
493
502
  using rvv = detail::rvv<0xFFFFFFFF>;
494
503
  #endif
@@ -53,8 +53,10 @@ namespace xsimd
53
53
  static constexpr size_t size = 1;
54
54
  };
55
55
 
56
+ #if __cplusplus < 201703L
56
57
  template <class T>
57
58
  constexpr size_t simd_traits_impl<T, false>::size;
59
+ #endif
58
60
 
59
61
  template <class T>
60
62
  struct simd_traits_impl<T, true>
@@ -64,8 +66,10 @@ namespace xsimd
64
66
  static constexpr size_t size = type::size;
65
67
  };
66
68
 
69
+ #if __cplusplus < 201703L
67
70
  template <class T>
68
71
  constexpr size_t simd_traits_impl<T, true>::size;
72
+ #endif
69
73
 
70
74
  template <class T, class A>
71
75
  struct static_check_supported_config_emitter
@@ -128,8 +132,10 @@ namespace xsimd
128
132
  static constexpr size_t size = simd_traits<type>::size;
129
133
  };
130
134
 
135
+ #if __cplusplus < 201703L
131
136
  template <class T>
132
137
  constexpr size_t revert_simd_traits<T>::size;
138
+ #endif
133
139
 
134
140
  template <class T>
135
141
  struct revert_simd_traits<batch<T>>
@@ -138,8 +144,10 @@ namespace xsimd
138
144
  static constexpr size_t size = batch<T>::size;
139
145
  };
140
146
 
147
+ #if __cplusplus < 201703L
141
148
  template <class T>
142
149
  constexpr size_t revert_simd_traits<batch<T>>::size;
150
+ #endif
143
151
 
144
152
  template <class T>
145
153
  using simd_type = typename simd_traits<T>::type;