scipy 1.16.2__cp314-cp314t-win_arm64.whl

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Files changed (1530) hide show
  1. scipy/__config__.py +161 -0
  2. scipy/__init__.py +150 -0
  3. scipy/_cyutility.cp314t-win_arm64.lib +0 -0
  4. scipy/_cyutility.cp314t-win_arm64.pyd +0 -0
  5. scipy/_distributor_init.py +18 -0
  6. scipy/_lib/__init__.py +14 -0
  7. scipy/_lib/_array_api.py +931 -0
  8. scipy/_lib/_array_api_compat_vendor.py +9 -0
  9. scipy/_lib/_array_api_no_0d.py +103 -0
  10. scipy/_lib/_bunch.py +229 -0
  11. scipy/_lib/_ccallback.py +251 -0
  12. scipy/_lib/_ccallback_c.cp314t-win_arm64.lib +0 -0
  13. scipy/_lib/_ccallback_c.cp314t-win_arm64.pyd +0 -0
  14. scipy/_lib/_disjoint_set.py +254 -0
  15. scipy/_lib/_docscrape.py +761 -0
  16. scipy/_lib/_elementwise_iterative_method.py +346 -0
  17. scipy/_lib/_fpumode.cp314t-win_arm64.lib +0 -0
  18. scipy/_lib/_fpumode.cp314t-win_arm64.pyd +0 -0
  19. scipy/_lib/_gcutils.py +105 -0
  20. scipy/_lib/_pep440.py +487 -0
  21. scipy/_lib/_sparse.py +41 -0
  22. scipy/_lib/_test_ccallback.cp314t-win_arm64.lib +0 -0
  23. scipy/_lib/_test_ccallback.cp314t-win_arm64.pyd +0 -0
  24. scipy/_lib/_test_deprecation_call.cp314t-win_arm64.lib +0 -0
  25. scipy/_lib/_test_deprecation_call.cp314t-win_arm64.pyd +0 -0
  26. scipy/_lib/_test_deprecation_def.cp314t-win_arm64.lib +0 -0
  27. scipy/_lib/_test_deprecation_def.cp314t-win_arm64.pyd +0 -0
  28. scipy/_lib/_testutils.py +373 -0
  29. scipy/_lib/_threadsafety.py +58 -0
  30. scipy/_lib/_tmpdirs.py +86 -0
  31. scipy/_lib/_uarray/LICENSE +29 -0
  32. scipy/_lib/_uarray/__init__.py +116 -0
  33. scipy/_lib/_uarray/_backend.py +707 -0
  34. scipy/_lib/_uarray/_uarray.cp314t-win_arm64.lib +0 -0
  35. scipy/_lib/_uarray/_uarray.cp314t-win_arm64.pyd +0 -0
  36. scipy/_lib/_util.py +1283 -0
  37. scipy/_lib/array_api_compat/__init__.py +22 -0
  38. scipy/_lib/array_api_compat/_internal.py +59 -0
  39. scipy/_lib/array_api_compat/common/__init__.py +1 -0
  40. scipy/_lib/array_api_compat/common/_aliases.py +727 -0
  41. scipy/_lib/array_api_compat/common/_fft.py +213 -0
  42. scipy/_lib/array_api_compat/common/_helpers.py +1058 -0
  43. scipy/_lib/array_api_compat/common/_linalg.py +232 -0
  44. scipy/_lib/array_api_compat/common/_typing.py +192 -0
  45. scipy/_lib/array_api_compat/cupy/__init__.py +13 -0
  46. scipy/_lib/array_api_compat/cupy/_aliases.py +156 -0
  47. scipy/_lib/array_api_compat/cupy/_info.py +336 -0
  48. scipy/_lib/array_api_compat/cupy/_typing.py +31 -0
  49. scipy/_lib/array_api_compat/cupy/fft.py +36 -0
  50. scipy/_lib/array_api_compat/cupy/linalg.py +49 -0
  51. scipy/_lib/array_api_compat/dask/__init__.py +0 -0
  52. scipy/_lib/array_api_compat/dask/array/__init__.py +12 -0
  53. scipy/_lib/array_api_compat/dask/array/_aliases.py +376 -0
  54. scipy/_lib/array_api_compat/dask/array/_info.py +416 -0
  55. scipy/_lib/array_api_compat/dask/array/fft.py +21 -0
  56. scipy/_lib/array_api_compat/dask/array/linalg.py +72 -0
  57. scipy/_lib/array_api_compat/numpy/__init__.py +28 -0
  58. scipy/_lib/array_api_compat/numpy/_aliases.py +190 -0
  59. scipy/_lib/array_api_compat/numpy/_info.py +366 -0
  60. scipy/_lib/array_api_compat/numpy/_typing.py +30 -0
  61. scipy/_lib/array_api_compat/numpy/fft.py +35 -0
  62. scipy/_lib/array_api_compat/numpy/linalg.py +143 -0
  63. scipy/_lib/array_api_compat/torch/__init__.py +22 -0
  64. scipy/_lib/array_api_compat/torch/_aliases.py +855 -0
  65. scipy/_lib/array_api_compat/torch/_info.py +369 -0
  66. scipy/_lib/array_api_compat/torch/_typing.py +3 -0
  67. scipy/_lib/array_api_compat/torch/fft.py +85 -0
  68. scipy/_lib/array_api_compat/torch/linalg.py +121 -0
  69. scipy/_lib/array_api_extra/__init__.py +38 -0
  70. scipy/_lib/array_api_extra/_delegation.py +171 -0
  71. scipy/_lib/array_api_extra/_lib/__init__.py +1 -0
  72. scipy/_lib/array_api_extra/_lib/_at.py +463 -0
  73. scipy/_lib/array_api_extra/_lib/_backends.py +46 -0
  74. scipy/_lib/array_api_extra/_lib/_funcs.py +937 -0
  75. scipy/_lib/array_api_extra/_lib/_lazy.py +357 -0
  76. scipy/_lib/array_api_extra/_lib/_testing.py +278 -0
  77. scipy/_lib/array_api_extra/_lib/_utils/__init__.py +1 -0
  78. scipy/_lib/array_api_extra/_lib/_utils/_compat.py +74 -0
  79. scipy/_lib/array_api_extra/_lib/_utils/_compat.pyi +45 -0
  80. scipy/_lib/array_api_extra/_lib/_utils/_helpers.py +559 -0
  81. scipy/_lib/array_api_extra/_lib/_utils/_typing.py +10 -0
  82. scipy/_lib/array_api_extra/_lib/_utils/_typing.pyi +105 -0
  83. scipy/_lib/array_api_extra/testing.py +359 -0
  84. scipy/_lib/cobyqa/__init__.py +20 -0
  85. scipy/_lib/cobyqa/framework.py +1240 -0
  86. scipy/_lib/cobyqa/main.py +1506 -0
  87. scipy/_lib/cobyqa/models.py +1529 -0
  88. scipy/_lib/cobyqa/problem.py +1296 -0
  89. scipy/_lib/cobyqa/settings.py +132 -0
  90. scipy/_lib/cobyqa/subsolvers/__init__.py +14 -0
  91. scipy/_lib/cobyqa/subsolvers/geometry.py +387 -0
  92. scipy/_lib/cobyqa/subsolvers/optim.py +1203 -0
  93. scipy/_lib/cobyqa/utils/__init__.py +18 -0
  94. scipy/_lib/cobyqa/utils/exceptions.py +22 -0
  95. scipy/_lib/cobyqa/utils/math.py +77 -0
  96. scipy/_lib/cobyqa/utils/versions.py +67 -0
  97. scipy/_lib/decorator.py +399 -0
  98. scipy/_lib/deprecation.py +274 -0
  99. scipy/_lib/doccer.py +366 -0
  100. scipy/_lib/messagestream.cp314t-win_arm64.lib +0 -0
  101. scipy/_lib/messagestream.cp314t-win_arm64.pyd +0 -0
  102. scipy/_lib/pyprima/__init__.py +212 -0
  103. scipy/_lib/pyprima/cobyla/__init__.py +0 -0
  104. scipy/_lib/pyprima/cobyla/cobyla.py +559 -0
  105. scipy/_lib/pyprima/cobyla/cobylb.py +714 -0
  106. scipy/_lib/pyprima/cobyla/geometry.py +226 -0
  107. scipy/_lib/pyprima/cobyla/initialize.py +215 -0
  108. scipy/_lib/pyprima/cobyla/trustregion.py +492 -0
  109. scipy/_lib/pyprima/cobyla/update.py +289 -0
  110. scipy/_lib/pyprima/common/__init__.py +0 -0
  111. scipy/_lib/pyprima/common/_bounds.py +34 -0
  112. scipy/_lib/pyprima/common/_linear_constraints.py +46 -0
  113. scipy/_lib/pyprima/common/_nonlinear_constraints.py +54 -0
  114. scipy/_lib/pyprima/common/_project.py +173 -0
  115. scipy/_lib/pyprima/common/checkbreak.py +93 -0
  116. scipy/_lib/pyprima/common/consts.py +47 -0
  117. scipy/_lib/pyprima/common/evaluate.py +99 -0
  118. scipy/_lib/pyprima/common/history.py +38 -0
  119. scipy/_lib/pyprima/common/infos.py +30 -0
  120. scipy/_lib/pyprima/common/linalg.py +435 -0
  121. scipy/_lib/pyprima/common/message.py +290 -0
  122. scipy/_lib/pyprima/common/powalg.py +131 -0
  123. scipy/_lib/pyprima/common/preproc.py +277 -0
  124. scipy/_lib/pyprima/common/present.py +5 -0
  125. scipy/_lib/pyprima/common/ratio.py +54 -0
  126. scipy/_lib/pyprima/common/redrho.py +47 -0
  127. scipy/_lib/pyprima/common/selectx.py +296 -0
  128. scipy/_lib/tests/__init__.py +0 -0
  129. scipy/_lib/tests/test__gcutils.py +110 -0
  130. scipy/_lib/tests/test__pep440.py +67 -0
  131. scipy/_lib/tests/test__testutils.py +32 -0
  132. scipy/_lib/tests/test__threadsafety.py +51 -0
  133. scipy/_lib/tests/test__util.py +641 -0
  134. scipy/_lib/tests/test_array_api.py +322 -0
  135. scipy/_lib/tests/test_bunch.py +169 -0
  136. scipy/_lib/tests/test_ccallback.py +196 -0
  137. scipy/_lib/tests/test_config.py +45 -0
  138. scipy/_lib/tests/test_deprecation.py +10 -0
  139. scipy/_lib/tests/test_doccer.py +143 -0
  140. scipy/_lib/tests/test_import_cycles.py +18 -0
  141. scipy/_lib/tests/test_public_api.py +482 -0
  142. scipy/_lib/tests/test_scipy_version.py +28 -0
  143. scipy/_lib/tests/test_tmpdirs.py +48 -0
  144. scipy/_lib/tests/test_warnings.py +137 -0
  145. scipy/_lib/uarray.py +31 -0
  146. scipy/cluster/__init__.py +31 -0
  147. scipy/cluster/_hierarchy.cp314t-win_arm64.lib +0 -0
  148. scipy/cluster/_hierarchy.cp314t-win_arm64.pyd +0 -0
  149. scipy/cluster/_optimal_leaf_ordering.cp314t-win_arm64.lib +0 -0
  150. scipy/cluster/_optimal_leaf_ordering.cp314t-win_arm64.pyd +0 -0
  151. scipy/cluster/_vq.cp314t-win_arm64.lib +0 -0
  152. scipy/cluster/_vq.cp314t-win_arm64.pyd +0 -0
  153. scipy/cluster/hierarchy.py +4348 -0
  154. scipy/cluster/tests/__init__.py +0 -0
  155. scipy/cluster/tests/hierarchy_test_data.py +145 -0
  156. scipy/cluster/tests/test_disjoint_set.py +202 -0
  157. scipy/cluster/tests/test_hierarchy.py +1238 -0
  158. scipy/cluster/tests/test_vq.py +434 -0
  159. scipy/cluster/vq.py +832 -0
  160. scipy/conftest.py +683 -0
  161. scipy/constants/__init__.py +358 -0
  162. scipy/constants/_codata.py +2266 -0
  163. scipy/constants/_constants.py +369 -0
  164. scipy/constants/codata.py +21 -0
  165. scipy/constants/constants.py +53 -0
  166. scipy/constants/tests/__init__.py +0 -0
  167. scipy/constants/tests/test_codata.py +78 -0
  168. scipy/constants/tests/test_constants.py +83 -0
  169. scipy/datasets/__init__.py +90 -0
  170. scipy/datasets/_download_all.py +71 -0
  171. scipy/datasets/_fetchers.py +225 -0
  172. scipy/datasets/_registry.py +26 -0
  173. scipy/datasets/_utils.py +81 -0
  174. scipy/datasets/tests/__init__.py +0 -0
  175. scipy/datasets/tests/test_data.py +128 -0
  176. scipy/differentiate/__init__.py +27 -0
  177. scipy/differentiate/_differentiate.py +1129 -0
  178. scipy/differentiate/tests/__init__.py +0 -0
  179. scipy/differentiate/tests/test_differentiate.py +694 -0
  180. scipy/fft/__init__.py +114 -0
  181. scipy/fft/_backend.py +196 -0
  182. scipy/fft/_basic.py +1650 -0
  183. scipy/fft/_basic_backend.py +197 -0
  184. scipy/fft/_debug_backends.py +22 -0
  185. scipy/fft/_fftlog.py +223 -0
  186. scipy/fft/_fftlog_backend.py +200 -0
  187. scipy/fft/_helper.py +348 -0
  188. scipy/fft/_pocketfft/LICENSE.md +25 -0
  189. scipy/fft/_pocketfft/__init__.py +9 -0
  190. scipy/fft/_pocketfft/basic.py +251 -0
  191. scipy/fft/_pocketfft/helper.py +249 -0
  192. scipy/fft/_pocketfft/pypocketfft.cp314t-win_arm64.lib +0 -0
  193. scipy/fft/_pocketfft/pypocketfft.cp314t-win_arm64.pyd +0 -0
  194. scipy/fft/_pocketfft/realtransforms.py +109 -0
  195. scipy/fft/_pocketfft/tests/__init__.py +0 -0
  196. scipy/fft/_pocketfft/tests/test_basic.py +1011 -0
  197. scipy/fft/_pocketfft/tests/test_real_transforms.py +505 -0
  198. scipy/fft/_realtransforms.py +706 -0
  199. scipy/fft/_realtransforms_backend.py +63 -0
  200. scipy/fft/tests/__init__.py +0 -0
  201. scipy/fft/tests/mock_backend.py +96 -0
  202. scipy/fft/tests/test_backend.py +98 -0
  203. scipy/fft/tests/test_basic.py +504 -0
  204. scipy/fft/tests/test_fftlog.py +215 -0
  205. scipy/fft/tests/test_helper.py +558 -0
  206. scipy/fft/tests/test_multithreading.py +84 -0
  207. scipy/fft/tests/test_real_transforms.py +247 -0
  208. scipy/fftpack/__init__.py +103 -0
  209. scipy/fftpack/_basic.py +428 -0
  210. scipy/fftpack/_helper.py +115 -0
  211. scipy/fftpack/_pseudo_diffs.py +554 -0
  212. scipy/fftpack/_realtransforms.py +598 -0
  213. scipy/fftpack/basic.py +20 -0
  214. scipy/fftpack/convolve.cp314t-win_arm64.lib +0 -0
  215. scipy/fftpack/convolve.cp314t-win_arm64.pyd +0 -0
  216. scipy/fftpack/helper.py +19 -0
  217. scipy/fftpack/pseudo_diffs.py +22 -0
  218. scipy/fftpack/realtransforms.py +19 -0
  219. scipy/fftpack/tests/__init__.py +0 -0
  220. scipy/fftpack/tests/fftw_double_ref.npz +0 -0
  221. scipy/fftpack/tests/fftw_longdouble_ref.npz +0 -0
  222. scipy/fftpack/tests/fftw_single_ref.npz +0 -0
  223. scipy/fftpack/tests/test.npz +0 -0
  224. scipy/fftpack/tests/test_basic.py +877 -0
  225. scipy/fftpack/tests/test_helper.py +54 -0
  226. scipy/fftpack/tests/test_import.py +33 -0
  227. scipy/fftpack/tests/test_pseudo_diffs.py +388 -0
  228. scipy/fftpack/tests/test_real_transforms.py +836 -0
  229. scipy/integrate/__init__.py +122 -0
  230. scipy/integrate/_bvp.py +1160 -0
  231. scipy/integrate/_cubature.py +729 -0
  232. scipy/integrate/_dop.cp314t-win_arm64.lib +0 -0
  233. scipy/integrate/_dop.cp314t-win_arm64.pyd +0 -0
  234. scipy/integrate/_ivp/__init__.py +8 -0
  235. scipy/integrate/_ivp/base.py +290 -0
  236. scipy/integrate/_ivp/bdf.py +478 -0
  237. scipy/integrate/_ivp/common.py +451 -0
  238. scipy/integrate/_ivp/dop853_coefficients.py +193 -0
  239. scipy/integrate/_ivp/ivp.py +755 -0
  240. scipy/integrate/_ivp/lsoda.py +224 -0
  241. scipy/integrate/_ivp/radau.py +572 -0
  242. scipy/integrate/_ivp/rk.py +601 -0
  243. scipy/integrate/_ivp/tests/__init__.py +0 -0
  244. scipy/integrate/_ivp/tests/test_ivp.py +1287 -0
  245. scipy/integrate/_ivp/tests/test_rk.py +37 -0
  246. scipy/integrate/_lebedev.py +5450 -0
  247. scipy/integrate/_lsoda.cp314t-win_arm64.lib +0 -0
  248. scipy/integrate/_lsoda.cp314t-win_arm64.pyd +0 -0
  249. scipy/integrate/_ode.py +1395 -0
  250. scipy/integrate/_odepack.cp314t-win_arm64.lib +0 -0
  251. scipy/integrate/_odepack.cp314t-win_arm64.pyd +0 -0
  252. scipy/integrate/_odepack_py.py +273 -0
  253. scipy/integrate/_quad_vec.py +674 -0
  254. scipy/integrate/_quadpack.cp314t-win_arm64.lib +0 -0
  255. scipy/integrate/_quadpack.cp314t-win_arm64.pyd +0 -0
  256. scipy/integrate/_quadpack_py.py +1283 -0
  257. scipy/integrate/_quadrature.py +1336 -0
  258. scipy/integrate/_rules/__init__.py +12 -0
  259. scipy/integrate/_rules/_base.py +518 -0
  260. scipy/integrate/_rules/_gauss_kronrod.py +202 -0
  261. scipy/integrate/_rules/_gauss_legendre.py +62 -0
  262. scipy/integrate/_rules/_genz_malik.py +210 -0
  263. scipy/integrate/_tanhsinh.py +1385 -0
  264. scipy/integrate/_test_multivariate.cp314t-win_arm64.lib +0 -0
  265. scipy/integrate/_test_multivariate.cp314t-win_arm64.pyd +0 -0
  266. scipy/integrate/_test_odeint_banded.cp314t-win_arm64.lib +0 -0
  267. scipy/integrate/_test_odeint_banded.cp314t-win_arm64.pyd +0 -0
  268. scipy/integrate/_vode.cp314t-win_arm64.lib +0 -0
  269. scipy/integrate/_vode.cp314t-win_arm64.pyd +0 -0
  270. scipy/integrate/dop.py +15 -0
  271. scipy/integrate/lsoda.py +15 -0
  272. scipy/integrate/odepack.py +17 -0
  273. scipy/integrate/quadpack.py +23 -0
  274. scipy/integrate/tests/__init__.py +0 -0
  275. scipy/integrate/tests/test__quad_vec.py +211 -0
  276. scipy/integrate/tests/test_banded_ode_solvers.py +305 -0
  277. scipy/integrate/tests/test_bvp.py +714 -0
  278. scipy/integrate/tests/test_cubature.py +1375 -0
  279. scipy/integrate/tests/test_integrate.py +840 -0
  280. scipy/integrate/tests/test_odeint_jac.py +74 -0
  281. scipy/integrate/tests/test_quadpack.py +680 -0
  282. scipy/integrate/tests/test_quadrature.py +730 -0
  283. scipy/integrate/tests/test_tanhsinh.py +1171 -0
  284. scipy/integrate/vode.py +15 -0
  285. scipy/interpolate/__init__.py +228 -0
  286. scipy/interpolate/_bary_rational.py +715 -0
  287. scipy/interpolate/_bsplines.py +2469 -0
  288. scipy/interpolate/_cubic.py +973 -0
  289. scipy/interpolate/_dfitpack.cp314t-win_arm64.lib +0 -0
  290. scipy/interpolate/_dfitpack.cp314t-win_arm64.pyd +0 -0
  291. scipy/interpolate/_dierckx.cp314t-win_arm64.lib +0 -0
  292. scipy/interpolate/_dierckx.cp314t-win_arm64.pyd +0 -0
  293. scipy/interpolate/_fitpack.cp314t-win_arm64.lib +0 -0
  294. scipy/interpolate/_fitpack.cp314t-win_arm64.pyd +0 -0
  295. scipy/interpolate/_fitpack2.py +2397 -0
  296. scipy/interpolate/_fitpack_impl.py +811 -0
  297. scipy/interpolate/_fitpack_py.py +898 -0
  298. scipy/interpolate/_fitpack_repro.py +996 -0
  299. scipy/interpolate/_interpnd.cp314t-win_arm64.lib +0 -0
  300. scipy/interpolate/_interpnd.cp314t-win_arm64.pyd +0 -0
  301. scipy/interpolate/_interpolate.py +2266 -0
  302. scipy/interpolate/_ndbspline.py +415 -0
  303. scipy/interpolate/_ndgriddata.py +329 -0
  304. scipy/interpolate/_pade.py +67 -0
  305. scipy/interpolate/_polyint.py +1025 -0
  306. scipy/interpolate/_ppoly.cp314t-win_arm64.lib +0 -0
  307. scipy/interpolate/_ppoly.cp314t-win_arm64.pyd +0 -0
  308. scipy/interpolate/_rbf.py +290 -0
  309. scipy/interpolate/_rbfinterp.py +550 -0
  310. scipy/interpolate/_rbfinterp_pythran.cp314t-win_arm64.lib +0 -0
  311. scipy/interpolate/_rbfinterp_pythran.cp314t-win_arm64.pyd +0 -0
  312. scipy/interpolate/_rgi.py +764 -0
  313. scipy/interpolate/_rgi_cython.cp314t-win_arm64.lib +0 -0
  314. scipy/interpolate/_rgi_cython.cp314t-win_arm64.pyd +0 -0
  315. scipy/interpolate/dfitpack.py +24 -0
  316. scipy/interpolate/fitpack.py +31 -0
  317. scipy/interpolate/fitpack2.py +29 -0
  318. scipy/interpolate/interpnd.py +24 -0
  319. scipy/interpolate/interpolate.py +30 -0
  320. scipy/interpolate/ndgriddata.py +23 -0
  321. scipy/interpolate/polyint.py +24 -0
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  1511. scipy/stats/tests/test_odds_ratio.py +148 -0
  1512. scipy/stats/tests/test_qmc.py +1492 -0
  1513. scipy/stats/tests/test_quantile.py +199 -0
  1514. scipy/stats/tests/test_rank.py +345 -0
  1515. scipy/stats/tests/test_relative_risk.py +95 -0
  1516. scipy/stats/tests/test_resampling.py +2000 -0
  1517. scipy/stats/tests/test_sampling.py +1450 -0
  1518. scipy/stats/tests/test_sensitivity_analysis.py +310 -0
  1519. scipy/stats/tests/test_stats.py +9707 -0
  1520. scipy/stats/tests/test_survival.py +466 -0
  1521. scipy/stats/tests/test_tukeylambda_stats.py +85 -0
  1522. scipy/stats/tests/test_variation.py +216 -0
  1523. scipy/version.py +12 -0
  1524. scipy-1.16.2.dist-info/DELVEWHEEL +2 -0
  1525. scipy-1.16.2.dist-info/LICENSE.txt +912 -0
  1526. scipy-1.16.2.dist-info/METADATA +1061 -0
  1527. scipy-1.16.2.dist-info/RECORD +1530 -0
  1528. scipy-1.16.2.dist-info/WHEEL +4 -0
  1529. scipy.libs/msvcp140-5f1c5dd31916990d94181e07bc3afb32.dll +0 -0
  1530. scipy.libs/scipy_openblas-f3ac85b1f412f7e86514c923dc4058d1.dll +0 -0
@@ -0,0 +1,1051 @@
1
+ import warnings
2
+ import numpy as np
3
+ from scipy.sparse.linalg._interface import LinearOperator
4
+ from .utils import make_system
5
+ from scipy.linalg import get_lapack_funcs
6
+
7
+ __all__ = ['bicg', 'bicgstab', 'cg', 'cgs', 'gmres', 'qmr']
8
+
9
+
10
+ def _get_atol_rtol(name, b_norm, atol=0., rtol=1e-5):
11
+ """
12
+ A helper function to handle tolerance normalization
13
+ """
14
+ if atol == 'legacy' or atol is None or atol < 0:
15
+ msg = (f"'scipy.sparse.linalg.{name}' called with invalid `atol`={atol}; "
16
+ "if set, `atol` must be a real, non-negative number.")
17
+ raise ValueError(msg)
18
+
19
+ atol = max(float(atol), float(rtol) * float(b_norm))
20
+
21
+ return atol, rtol
22
+
23
+
24
+ def bicg(A, b, x0=None, *, rtol=1e-5, atol=0., maxiter=None, M=None, callback=None):
25
+ """
26
+ Solve ``Ax = b`` with the BIConjugate Gradient method.
27
+
28
+ Parameters
29
+ ----------
30
+ A : {sparse array, ndarray, LinearOperator}
31
+ The real or complex N-by-N matrix of the linear system.
32
+ Alternatively, `A` can be a linear operator which can
33
+ produce ``Ax`` and ``A^T x`` using, e.g.,
34
+ ``scipy.sparse.linalg.LinearOperator``.
35
+ b : ndarray
36
+ Right hand side of the linear system. Has shape (N,) or (N,1).
37
+ x0 : ndarray
38
+ Starting guess for the solution.
39
+ rtol, atol : float, optional
40
+ Parameters for the convergence test. For convergence,
41
+ ``norm(b - A @ x) <= max(rtol*norm(b), atol)`` should be satisfied.
42
+ The default is ``atol=0.`` and ``rtol=1e-5``.
43
+ maxiter : integer
44
+ Maximum number of iterations. Iteration will stop after maxiter
45
+ steps even if the specified tolerance has not been achieved.
46
+ M : {sparse array, ndarray, LinearOperator}
47
+ Preconditioner for `A`. It should approximate the
48
+ inverse of `A` (see Notes). Effective preconditioning dramatically improves the
49
+ rate of convergence, which implies that fewer iterations are needed
50
+ to reach a given error tolerance.
51
+ callback : function
52
+ User-supplied function to call after each iteration. It is called
53
+ as ``callback(xk)``, where ``xk`` is the current solution vector.
54
+
55
+ Returns
56
+ -------
57
+ x : ndarray
58
+ The converged solution.
59
+ info : integer
60
+ Provides convergence information:
61
+ 0 : successful exit
62
+ >0 : convergence to tolerance not achieved, number of iterations
63
+ <0 : parameter breakdown
64
+
65
+ Notes
66
+ -----
67
+ The preconditioner `M` should be a matrix such that ``M @ A`` has a smaller
68
+ condition number than `A`, see [1]_ .
69
+
70
+ References
71
+ ----------
72
+ .. [1] "Preconditioner", Wikipedia,
73
+ https://en.wikipedia.org/wiki/Preconditioner
74
+ .. [2] "Biconjugate gradient method", Wikipedia,
75
+ https://en.wikipedia.org/wiki/Biconjugate_gradient_method
76
+
77
+ Examples
78
+ --------
79
+ >>> import numpy as np
80
+ >>> from scipy.sparse import csc_array
81
+ >>> from scipy.sparse.linalg import bicg
82
+ >>> A = csc_array([[3, 2, 0], [1, -1, 0], [0, 5, 1.]])
83
+ >>> b = np.array([2., 4., -1.])
84
+ >>> x, exitCode = bicg(A, b, atol=1e-5)
85
+ >>> print(exitCode) # 0 indicates successful convergence
86
+ 0
87
+ >>> np.allclose(A.dot(x), b)
88
+ True
89
+ """
90
+ A, M, x, b = make_system(A, M, x0, b)
91
+ bnrm2 = np.linalg.norm(b)
92
+
93
+ atol, _ = _get_atol_rtol('bicg', bnrm2, atol, rtol)
94
+
95
+ if bnrm2 == 0:
96
+ return b, 0
97
+
98
+ n = len(b)
99
+ dotprod = np.vdot if np.iscomplexobj(x) else np.dot
100
+
101
+ if maxiter is None:
102
+ maxiter = n*10
103
+
104
+ matvec, rmatvec = A.matvec, A.rmatvec
105
+ psolve, rpsolve = M.matvec, M.rmatvec
106
+
107
+ rhotol = np.finfo(x.dtype.char).eps**2
108
+
109
+ # Dummy values to initialize vars, silence linter warnings
110
+ rho_prev, p, ptilde = None, None, None
111
+
112
+ r = b - matvec(x) if x.any() else b.copy()
113
+ rtilde = r.copy()
114
+
115
+ for iteration in range(maxiter):
116
+ if np.linalg.norm(r) < atol: # Are we done?
117
+ return x, 0
118
+
119
+ z = psolve(r)
120
+ ztilde = rpsolve(rtilde)
121
+ # order matters in this dot product
122
+ rho_cur = dotprod(rtilde, z)
123
+
124
+ if np.abs(rho_cur) < rhotol: # Breakdown case
125
+ return x, -10
126
+
127
+ if iteration > 0:
128
+ beta = rho_cur / rho_prev
129
+ p *= beta
130
+ p += z
131
+ ptilde *= beta.conj()
132
+ ptilde += ztilde
133
+ else: # First spin
134
+ p = z.copy()
135
+ ptilde = ztilde.copy()
136
+
137
+ q = matvec(p)
138
+ qtilde = rmatvec(ptilde)
139
+ rv = dotprod(ptilde, q)
140
+
141
+ if rv == 0:
142
+ return x, -11
143
+
144
+ alpha = rho_cur / rv
145
+ x += alpha*p
146
+ r -= alpha*q
147
+ rtilde -= alpha.conj()*qtilde
148
+ rho_prev = rho_cur
149
+
150
+ if callback:
151
+ callback(x)
152
+
153
+ else: # for loop exhausted
154
+ # Return incomplete progress
155
+ return x, maxiter
156
+
157
+
158
+ def bicgstab(A, b, x0=None, *, rtol=1e-5, atol=0., maxiter=None, M=None,
159
+ callback=None):
160
+ """
161
+ Solve ``Ax = b`` with the BIConjugate Gradient STABilized method.
162
+
163
+ Parameters
164
+ ----------
165
+ A : {sparse array, ndarray, LinearOperator}
166
+ The real or complex N-by-N matrix of the linear system.
167
+ Alternatively, `A` can be a linear operator which can
168
+ produce ``Ax`` and ``A^T x`` using, e.g.,
169
+ ``scipy.sparse.linalg.LinearOperator``.
170
+ b : ndarray
171
+ Right hand side of the linear system. Has shape (N,) or (N,1).
172
+ x0 : ndarray
173
+ Starting guess for the solution.
174
+ rtol, atol : float, optional
175
+ Parameters for the convergence test. For convergence,
176
+ ``norm(b - A @ x) <= max(rtol*norm(b), atol)`` should be satisfied.
177
+ The default is ``atol=0.`` and ``rtol=1e-5``.
178
+ maxiter : integer
179
+ Maximum number of iterations. Iteration will stop after maxiter
180
+ steps even if the specified tolerance has not been achieved.
181
+ M : {sparse array, ndarray, LinearOperator}
182
+ Preconditioner for `A`. It should approximate the
183
+ inverse of `A` (see Notes). Effective preconditioning dramatically improves the
184
+ rate of convergence, which implies that fewer iterations are needed
185
+ to reach a given error tolerance.
186
+ callback : function
187
+ User-supplied function to call after each iteration. It is called
188
+ as ``callback(xk)``, where ``xk`` is the current solution vector.
189
+
190
+ Returns
191
+ -------
192
+ x : ndarray
193
+ The converged solution.
194
+ info : integer
195
+ Provides convergence information:
196
+ 0 : successful exit
197
+ >0 : convergence to tolerance not achieved, number of iterations
198
+ <0 : parameter breakdown
199
+
200
+ Notes
201
+ -----
202
+ The preconditioner `M` should be a matrix such that ``M @ A`` has a smaller
203
+ condition number than `A`, see [1]_ .
204
+
205
+ References
206
+ ----------
207
+ .. [1] "Preconditioner", Wikipedia,
208
+ https://en.wikipedia.org/wiki/Preconditioner
209
+ .. [2] "Biconjugate gradient stabilized method",
210
+ Wikipedia, https://en.wikipedia.org/wiki/Biconjugate_gradient_stabilized_method
211
+
212
+ Examples
213
+ --------
214
+ >>> import numpy as np
215
+ >>> from scipy.sparse import csc_array
216
+ >>> from scipy.sparse.linalg import bicgstab
217
+ >>> R = np.array([[4, 2, 0, 1],
218
+ ... [3, 0, 0, 2],
219
+ ... [0, 1, 1, 1],
220
+ ... [0, 2, 1, 0]])
221
+ >>> A = csc_array(R)
222
+ >>> b = np.array([-1, -0.5, -1, 2])
223
+ >>> x, exit_code = bicgstab(A, b, atol=1e-5)
224
+ >>> print(exit_code) # 0 indicates successful convergence
225
+ 0
226
+ >>> np.allclose(A.dot(x), b)
227
+ True
228
+ """
229
+ A, M, x, b = make_system(A, M, x0, b)
230
+ bnrm2 = np.linalg.norm(b)
231
+
232
+ atol, _ = _get_atol_rtol('bicgstab', bnrm2, atol, rtol)
233
+
234
+ if bnrm2 == 0:
235
+ return b, 0
236
+
237
+ n = len(b)
238
+
239
+ dotprod = np.vdot if np.iscomplexobj(x) else np.dot
240
+
241
+ if maxiter is None:
242
+ maxiter = n*10
243
+
244
+ matvec = A.matvec
245
+ psolve = M.matvec
246
+
247
+ # These values make no sense but coming from original Fortran code
248
+ # sqrt might have been meant instead.
249
+ rhotol = np.finfo(x.dtype.char).eps**2
250
+ omegatol = rhotol
251
+
252
+ # Dummy values to initialize vars, silence linter warnings
253
+ rho_prev, omega, alpha, p, v = None, None, None, None, None
254
+
255
+ r = b - matvec(x) if x.any() else b.copy()
256
+ rtilde = r.copy()
257
+
258
+ for iteration in range(maxiter):
259
+ if np.linalg.norm(r) < atol: # Are we done?
260
+ return x, 0
261
+
262
+ rho = dotprod(rtilde, r)
263
+ if np.abs(rho) < rhotol: # rho breakdown
264
+ return x, -10
265
+
266
+ if iteration > 0:
267
+ if np.abs(omega) < omegatol: # omega breakdown
268
+ return x, -11
269
+
270
+ beta = (rho / rho_prev) * (alpha / omega)
271
+ p -= omega*v
272
+ p *= beta
273
+ p += r
274
+ else: # First spin
275
+ s = np.empty_like(r)
276
+ p = r.copy()
277
+
278
+ phat = psolve(p)
279
+ v = matvec(phat)
280
+ rv = dotprod(rtilde, v)
281
+ if rv == 0:
282
+ return x, -11
283
+ alpha = rho / rv
284
+ r -= alpha*v
285
+ s[:] = r[:]
286
+
287
+ if np.linalg.norm(s) < atol:
288
+ x += alpha*phat
289
+ return x, 0
290
+
291
+ shat = psolve(s)
292
+ t = matvec(shat)
293
+ omega = dotprod(t, s) / dotprod(t, t)
294
+ x += alpha*phat
295
+ x += omega*shat
296
+ r -= omega*t
297
+ rho_prev = rho
298
+
299
+ if callback:
300
+ callback(x)
301
+
302
+ else: # for loop exhausted
303
+ # Return incomplete progress
304
+ return x, maxiter
305
+
306
+
307
+ def cg(A, b, x0=None, *, rtol=1e-5, atol=0., maxiter=None, M=None, callback=None):
308
+ """
309
+ Solve ``Ax = b`` with the Conjugate Gradient method, for a symmetric,
310
+ positive-definite `A`.
311
+
312
+ Parameters
313
+ ----------
314
+ A : {sparse array, ndarray, LinearOperator}
315
+ The real or complex N-by-N matrix of the linear system.
316
+ `A` must represent a hermitian, positive definite matrix.
317
+ Alternatively, `A` can be a linear operator which can
318
+ produce ``Ax`` using, e.g.,
319
+ ``scipy.sparse.linalg.LinearOperator``.
320
+ b : ndarray
321
+ Right hand side of the linear system. Has shape (N,) or (N,1).
322
+ x0 : ndarray
323
+ Starting guess for the solution.
324
+ rtol, atol : float, optional
325
+ Parameters for the convergence test. For convergence,
326
+ ``norm(b - A @ x) <= max(rtol*norm(b), atol)`` should be satisfied.
327
+ The default is ``atol=0.`` and ``rtol=1e-5``.
328
+ maxiter : integer
329
+ Maximum number of iterations. Iteration will stop after maxiter
330
+ steps even if the specified tolerance has not been achieved.
331
+ M : {sparse array, ndarray, LinearOperator}
332
+ Preconditioner for `A`. `M` must represent a hermitian, positive definite
333
+ matrix. It should approximate the inverse of `A` (see Notes).
334
+ Effective preconditioning dramatically improves the
335
+ rate of convergence, which implies that fewer iterations are needed
336
+ to reach a given error tolerance.
337
+ callback : function
338
+ User-supplied function to call after each iteration. It is called
339
+ as ``callback(xk)``, where ``xk`` is the current solution vector.
340
+
341
+ Returns
342
+ -------
343
+ x : ndarray
344
+ The converged solution.
345
+ info : integer
346
+ Provides convergence information:
347
+ 0 : successful exit
348
+ >0 : convergence to tolerance not achieved, number of iterations
349
+
350
+ Notes
351
+ -----
352
+ The preconditioner `M` should be a matrix such that ``M @ A`` has a smaller
353
+ condition number than `A`, see [2]_.
354
+
355
+ References
356
+ ----------
357
+ .. [1] "Conjugate Gradient Method, Wikipedia,
358
+ https://en.wikipedia.org/wiki/Conjugate_gradient_method
359
+ .. [2] "Preconditioner",
360
+ Wikipedia, https://en.wikipedia.org/wiki/Preconditioner
361
+
362
+ Examples
363
+ --------
364
+ >>> import numpy as np
365
+ >>> from scipy.sparse import csc_array
366
+ >>> from scipy.sparse.linalg import cg
367
+ >>> P = np.array([[4, 0, 1, 0],
368
+ ... [0, 5, 0, 0],
369
+ ... [1, 0, 3, 2],
370
+ ... [0, 0, 2, 4]])
371
+ >>> A = csc_array(P)
372
+ >>> b = np.array([-1, -0.5, -1, 2])
373
+ >>> x, exit_code = cg(A, b, atol=1e-5)
374
+ >>> print(exit_code) # 0 indicates successful convergence
375
+ 0
376
+ >>> np.allclose(A.dot(x), b)
377
+ True
378
+ """
379
+ A, M, x, b = make_system(A, M, x0, b)
380
+ bnrm2 = np.linalg.norm(b)
381
+
382
+ atol, _ = _get_atol_rtol('cg', bnrm2, atol, rtol)
383
+
384
+ if bnrm2 == 0:
385
+ return b, 0
386
+
387
+ n = len(b)
388
+
389
+ if maxiter is None:
390
+ maxiter = n*10
391
+
392
+ dotprod = np.vdot if np.iscomplexobj(x) else np.dot
393
+
394
+ matvec = A.matvec
395
+ psolve = M.matvec
396
+ r = b - matvec(x) if x.any() else b.copy()
397
+
398
+ # Dummy value to initialize var, silences warnings
399
+ rho_prev, p = None, None
400
+
401
+ for iteration in range(maxiter):
402
+ if np.linalg.norm(r) < atol: # Are we done?
403
+ return x, 0
404
+
405
+ z = psolve(r)
406
+ rho_cur = dotprod(r, z)
407
+ if iteration > 0:
408
+ beta = rho_cur / rho_prev
409
+ p *= beta
410
+ p += z
411
+ else: # First spin
412
+ p = np.empty_like(r)
413
+ p[:] = z[:]
414
+
415
+ q = matvec(p)
416
+ alpha = rho_cur / dotprod(p, q)
417
+ x += alpha*p
418
+ r -= alpha*q
419
+ rho_prev = rho_cur
420
+
421
+ if callback:
422
+ callback(x)
423
+
424
+ else: # for loop exhausted
425
+ # Return incomplete progress
426
+ return x, maxiter
427
+
428
+
429
+ def cgs(A, b, x0=None, *, rtol=1e-5, atol=0., maxiter=None, M=None, callback=None):
430
+ """
431
+ Solve ``Ax = b`` with the Conjugate Gradient Squared method.
432
+
433
+ Parameters
434
+ ----------
435
+ A : {sparse array, ndarray, LinearOperator}
436
+ The real-valued N-by-N matrix of the linear system.
437
+ Alternatively, `A` can be a linear operator which can
438
+ produce ``Ax`` using, e.g.,
439
+ ``scipy.sparse.linalg.LinearOperator``.
440
+ b : ndarray
441
+ Right hand side of the linear system. Has shape (N,) or (N,1).
442
+ x0 : ndarray
443
+ Starting guess for the solution.
444
+ rtol, atol : float, optional
445
+ Parameters for the convergence test. For convergence,
446
+ ``norm(b - A @ x) <= max(rtol*norm(b), atol)`` should be satisfied.
447
+ The default is ``atol=0.`` and ``rtol=1e-5``.
448
+ maxiter : integer
449
+ Maximum number of iterations. Iteration will stop after maxiter
450
+ steps even if the specified tolerance has not been achieved.
451
+ M : {sparse array, ndarray, LinearOperator}
452
+ Preconditioner for ``A``. It should approximate the
453
+ inverse of `A` (see Notes). Effective preconditioning dramatically improves the
454
+ rate of convergence, which implies that fewer iterations are needed
455
+ to reach a given error tolerance.
456
+ callback : function
457
+ User-supplied function to call after each iteration. It is called
458
+ as ``callback(xk)``, where ``xk`` is the current solution vector.
459
+
460
+ Returns
461
+ -------
462
+ x : ndarray
463
+ The converged solution.
464
+ info : integer
465
+ Provides convergence information:
466
+ 0 : successful exit
467
+ >0 : convergence to tolerance not achieved, number of iterations
468
+ <0 : parameter breakdown
469
+
470
+ Notes
471
+ -----
472
+ The preconditioner `M` should be a matrix such that ``M @ A`` has a smaller
473
+ condition number than `A`, see [1]_.
474
+
475
+ References
476
+ ----------
477
+ .. [1] "Preconditioner", Wikipedia,
478
+ https://en.wikipedia.org/wiki/Preconditioner
479
+ .. [2] "Conjugate gradient squared", Wikipedia,
480
+ https://en.wikipedia.org/wiki/Conjugate_gradient_squared_method
481
+
482
+ Examples
483
+ --------
484
+ >>> import numpy as np
485
+ >>> from scipy.sparse import csc_array
486
+ >>> from scipy.sparse.linalg import cgs
487
+ >>> R = np.array([[4, 2, 0, 1],
488
+ ... [3, 0, 0, 2],
489
+ ... [0, 1, 1, 1],
490
+ ... [0, 2, 1, 0]])
491
+ >>> A = csc_array(R)
492
+ >>> b = np.array([-1, -0.5, -1, 2])
493
+ >>> x, exit_code = cgs(A, b)
494
+ >>> print(exit_code) # 0 indicates successful convergence
495
+ 0
496
+ >>> np.allclose(A.dot(x), b)
497
+ True
498
+ """
499
+ A, M, x, b = make_system(A, M, x0, b)
500
+ bnrm2 = np.linalg.norm(b)
501
+
502
+ atol, _ = _get_atol_rtol('cgs', bnrm2, atol, rtol)
503
+
504
+ if bnrm2 == 0:
505
+ return b, 0
506
+
507
+ n = len(b)
508
+
509
+ dotprod = np.vdot if np.iscomplexobj(x) else np.dot
510
+
511
+ if maxiter is None:
512
+ maxiter = n*10
513
+
514
+ matvec = A.matvec
515
+ psolve = M.matvec
516
+
517
+ rhotol = np.finfo(x.dtype.char).eps**2
518
+
519
+ r = b - matvec(x) if x.any() else b.copy()
520
+
521
+ rtilde = r.copy()
522
+ bnorm = np.linalg.norm(b)
523
+ if bnorm == 0:
524
+ bnorm = 1
525
+
526
+ # Dummy values to initialize vars, silence linter warnings
527
+ rho_prev, p, u, q = None, None, None, None
528
+
529
+ for iteration in range(maxiter):
530
+ rnorm = np.linalg.norm(r)
531
+ if rnorm < atol: # Are we done?
532
+ return x, 0
533
+
534
+ rho_cur = dotprod(rtilde, r)
535
+ if np.abs(rho_cur) < rhotol: # Breakdown case
536
+ return x, -10
537
+
538
+ if iteration > 0:
539
+ beta = rho_cur / rho_prev
540
+
541
+ # u = r + beta * q
542
+ # p = u + beta * (q + beta * p);
543
+ u[:] = r[:]
544
+ u += beta*q
545
+
546
+ p *= beta
547
+ p += q
548
+ p *= beta
549
+ p += u
550
+
551
+ else: # First spin
552
+ p = r.copy()
553
+ u = r.copy()
554
+ q = np.empty_like(r)
555
+
556
+ phat = psolve(p)
557
+ vhat = matvec(phat)
558
+ rv = dotprod(rtilde, vhat)
559
+
560
+ if rv == 0: # Dot product breakdown
561
+ return x, -11
562
+
563
+ alpha = rho_cur / rv
564
+ q[:] = u[:]
565
+ q -= alpha*vhat
566
+ uhat = psolve(u + q)
567
+ x += alpha*uhat
568
+
569
+ # Due to numerical error build-up the actual residual is computed
570
+ # instead of the following two lines that were in the original
571
+ # FORTRAN templates, still using a single matvec.
572
+
573
+ # qhat = matvec(uhat)
574
+ # r -= alpha*qhat
575
+ r = b - matvec(x)
576
+
577
+ rho_prev = rho_cur
578
+
579
+ if callback:
580
+ callback(x)
581
+
582
+ else: # for loop exhausted
583
+ # Return incomplete progress
584
+ return x, maxiter
585
+
586
+
587
+ def gmres(A, b, x0=None, *, rtol=1e-5, atol=0., restart=None, maxiter=None, M=None,
588
+ callback=None, callback_type=None):
589
+ """
590
+ Solve ``Ax = b`` with the Generalized Minimal RESidual method.
591
+
592
+ Parameters
593
+ ----------
594
+ A : {sparse array, ndarray, LinearOperator}
595
+ The real or complex N-by-N matrix of the linear system.
596
+ Alternatively, `A` can be a linear operator which can
597
+ produce ``Ax`` using, e.g.,
598
+ ``scipy.sparse.linalg.LinearOperator``.
599
+ b : ndarray
600
+ Right hand side of the linear system. Has shape (N,) or (N,1).
601
+ x0 : ndarray
602
+ Starting guess for the solution (a vector of zeros by default).
603
+ atol, rtol : float
604
+ Parameters for the convergence test. For convergence,
605
+ ``norm(b - A @ x) <= max(rtol*norm(b), atol)`` should be satisfied.
606
+ The default is ``atol=0.`` and ``rtol=1e-5``.
607
+ restart : int, optional
608
+ Number of iterations between restarts. Larger values increase
609
+ iteration cost, but may be necessary for convergence.
610
+ If omitted, ``min(20, n)`` is used.
611
+ maxiter : int, optional
612
+ Maximum number of iterations (restart cycles). Iteration will stop
613
+ after maxiter steps even if the specified tolerance has not been
614
+ achieved. See `callback_type`.
615
+ M : {sparse array, ndarray, LinearOperator}
616
+ Inverse of the preconditioner of `A`. `M` should approximate the
617
+ inverse of `A` and be easy to solve for (see Notes). Effective
618
+ preconditioning dramatically improves the rate of convergence,
619
+ which implies that fewer iterations are needed to reach a given
620
+ error tolerance. By default, no preconditioner is used.
621
+ In this implementation, left preconditioning is used,
622
+ and the preconditioned residual is minimized. However, the final
623
+ convergence is tested with respect to the ``b - A @ x`` residual.
624
+ callback : function
625
+ User-supplied function to call after each iteration. It is called
626
+ as ``callback(args)``, where ``args`` are selected by `callback_type`.
627
+ callback_type : {'x', 'pr_norm', 'legacy'}, optional
628
+ Callback function argument requested:
629
+ - ``x``: current iterate (ndarray), called on every restart
630
+ - ``pr_norm``: relative (preconditioned) residual norm (float),
631
+ called on every inner iteration
632
+ - ``legacy`` (default): same as ``pr_norm``, but also changes the
633
+ meaning of `maxiter` to count inner iterations instead of restart
634
+ cycles.
635
+
636
+ This keyword has no effect if `callback` is not set.
637
+
638
+ Returns
639
+ -------
640
+ x : ndarray
641
+ The converged solution.
642
+ info : int
643
+ Provides convergence information:
644
+ 0 : successful exit
645
+ >0 : convergence to tolerance not achieved, number of iterations
646
+
647
+ See Also
648
+ --------
649
+ LinearOperator
650
+
651
+ Notes
652
+ -----
653
+ A preconditioner, P, is chosen such that P is close to A but easy to solve
654
+ for. The preconditioner parameter required by this routine is
655
+ ``M = P^-1``. The inverse should preferably not be calculated
656
+ explicitly. Rather, use the following template to produce M::
657
+
658
+ # Construct a linear operator that computes P^-1 @ x.
659
+ import scipy.sparse.linalg as spla
660
+ M_x = lambda x: spla.spsolve(P, x)
661
+ M = spla.LinearOperator((n, n), M_x)
662
+
663
+ Examples
664
+ --------
665
+ >>> import numpy as np
666
+ >>> from scipy.sparse import csc_array
667
+ >>> from scipy.sparse.linalg import gmres
668
+ >>> A = csc_array([[3, 2, 0], [1, -1, 0], [0, 5, 1]], dtype=float)
669
+ >>> b = np.array([2, 4, -1], dtype=float)
670
+ >>> x, exitCode = gmres(A, b, atol=1e-5)
671
+ >>> print(exitCode) # 0 indicates successful convergence
672
+ 0
673
+ >>> np.allclose(A.dot(x), b)
674
+ True
675
+ """
676
+ if callback is not None and callback_type is None:
677
+ # Warn about 'callback_type' semantic changes.
678
+ # Probably should be removed only in far future, Scipy 2.0 or so.
679
+ msg = ("scipy.sparse.linalg.gmres called without specifying "
680
+ "`callback_type`. The default value will be changed in"
681
+ " a future release. For compatibility, specify a value "
682
+ "for `callback_type` explicitly, e.g., "
683
+ "``gmres(..., callback_type='pr_norm')``, or to retain the "
684
+ "old behavior ``gmres(..., callback_type='legacy')``"
685
+ )
686
+ warnings.warn(msg, category=DeprecationWarning, stacklevel=3)
687
+
688
+ if callback_type is None:
689
+ callback_type = 'legacy'
690
+
691
+ if callback_type not in ('x', 'pr_norm', 'legacy'):
692
+ raise ValueError(f"Unknown callback_type: {callback_type!r}")
693
+
694
+ if callback is None:
695
+ callback_type = None
696
+
697
+ A, M, x, b = make_system(A, M, x0, b)
698
+ matvec = A.matvec
699
+ psolve = M.matvec
700
+ n = len(b)
701
+ bnrm2 = np.linalg.norm(b)
702
+
703
+ atol, _ = _get_atol_rtol('gmres', bnrm2, atol, rtol)
704
+
705
+ if bnrm2 == 0:
706
+ return b, 0
707
+
708
+ eps = np.finfo(x.dtype.char).eps
709
+
710
+ dotprod = np.vdot if np.iscomplexobj(x) else np.dot
711
+
712
+ if maxiter is None:
713
+ maxiter = n*10
714
+
715
+ if restart is None:
716
+ restart = 20
717
+ restart = min(restart, n)
718
+
719
+ Mb_nrm2 = np.linalg.norm(psolve(b))
720
+
721
+ # ====================================================
722
+ # =========== Tolerance control from gh-8400 =========
723
+ # ====================================================
724
+ # Tolerance passed to GMRESREVCOM applies to the inner
725
+ # iteration and deals with the left-preconditioned
726
+ # residual.
727
+ ptol_max_factor = 1.
728
+ ptol = Mb_nrm2 * min(ptol_max_factor, atol / bnrm2)
729
+ presid = 0.
730
+ # ====================================================
731
+ lartg = get_lapack_funcs('lartg', dtype=x.dtype)
732
+
733
+ # allocate internal variables
734
+ v = np.empty([restart+1, n], dtype=x.dtype)
735
+ h = np.zeros([restart, restart+1], dtype=x.dtype)
736
+ givens = np.zeros([restart, 2], dtype=x.dtype)
737
+
738
+ # legacy iteration count
739
+ inner_iter = 0
740
+
741
+ for iteration in range(maxiter):
742
+ if iteration == 0:
743
+ r = b - matvec(x) if x.any() else b.copy()
744
+ if np.linalg.norm(r) < atol: # Are we done?
745
+ return x, 0
746
+
747
+ v[0, :] = psolve(r)
748
+ tmp = np.linalg.norm(v[0, :])
749
+ v[0, :] *= (1 / tmp)
750
+ # RHS of the Hessenberg problem
751
+ S = np.zeros(restart+1, dtype=x.dtype)
752
+ S[0] = tmp
753
+
754
+ breakdown = False
755
+ for col in range(restart):
756
+ av = matvec(v[col, :])
757
+ w = psolve(av)
758
+
759
+ # Modified Gram-Schmidt
760
+ h0 = np.linalg.norm(w)
761
+ for k in range(col+1):
762
+ tmp = dotprod(v[k, :], w)
763
+ h[col, k] = tmp
764
+ w -= tmp*v[k, :]
765
+
766
+ h1 = np.linalg.norm(w)
767
+ h[col, col + 1] = h1
768
+ v[col + 1, :] = w[:]
769
+
770
+ # Exact solution indicator
771
+ if h1 <= eps*h0:
772
+ h[col, col + 1] = 0
773
+ breakdown = True
774
+ else:
775
+ v[col + 1, :] *= (1 / h1)
776
+
777
+ # apply past Givens rotations to current h column
778
+ for k in range(col):
779
+ c, s = givens[k, 0], givens[k, 1]
780
+ n0, n1 = h[col, [k, k+1]]
781
+ h[col, [k, k + 1]] = [c*n0 + s*n1, -s.conj()*n0 + c*n1]
782
+
783
+ # get and apply current rotation to h and S
784
+ c, s, mag = lartg(h[col, col], h[col, col+1])
785
+ givens[col, :] = [c, s]
786
+ h[col, [col, col+1]] = mag, 0
787
+
788
+ # S[col+1] component is always 0
789
+ tmp = -np.conjugate(s)*S[col]
790
+ S[[col, col + 1]] = [c*S[col], tmp]
791
+ presid = np.abs(tmp)
792
+ inner_iter += 1
793
+
794
+ if callback_type in ('legacy', 'pr_norm'):
795
+ callback(presid / bnrm2)
796
+ # Legacy behavior
797
+ if callback_type == 'legacy' and inner_iter == maxiter:
798
+ break
799
+ if presid <= ptol or breakdown:
800
+ break
801
+
802
+ # Solve h(col, col) upper triangular system and allow pseudo-solve
803
+ # singular cases as in (but without the f2py copies):
804
+ # y = trsv(h[:col+1, :col+1].T, S[:col+1])
805
+
806
+ if h[col, col] == 0:
807
+ S[col] = 0
808
+
809
+ y = np.zeros([col+1], dtype=x.dtype)
810
+ y[:] = S[:col+1]
811
+ for k in range(col, 0, -1):
812
+ if y[k] != 0:
813
+ y[k] /= h[k, k]
814
+ tmp = y[k]
815
+ y[:k] -= tmp*h[k, :k]
816
+ if y[0] != 0:
817
+ y[0] /= h[0, 0]
818
+
819
+ x += y @ v[:col+1, :]
820
+
821
+ r = b - matvec(x)
822
+ rnorm = np.linalg.norm(r)
823
+
824
+ # Legacy exit
825
+ if callback_type == 'legacy' and inner_iter == maxiter:
826
+ return x, 0 if rnorm <= atol else maxiter
827
+
828
+ if callback_type == 'x':
829
+ callback(x)
830
+
831
+ if rnorm <= atol:
832
+ break
833
+ elif breakdown:
834
+ # Reached breakdown (= exact solution), but the external
835
+ # tolerance check failed. Bail out with failure.
836
+ break
837
+ elif presid <= ptol:
838
+ # Inner loop passed but outer didn't
839
+ ptol_max_factor = max(eps, 0.25 * ptol_max_factor)
840
+ else:
841
+ ptol_max_factor = min(1.0, 1.5 * ptol_max_factor)
842
+
843
+ ptol = presid * min(ptol_max_factor, atol / rnorm)
844
+
845
+ info = 0 if (rnorm <= atol) else maxiter
846
+ return x, info
847
+
848
+
849
+ def qmr(A, b, x0=None, *, rtol=1e-5, atol=0., maxiter=None, M1=None, M2=None,
850
+ callback=None):
851
+ """
852
+ Solve ``Ax = b`` with the Quasi-Minimal Residual method.
853
+
854
+ Parameters
855
+ ----------
856
+ A : {sparse array, ndarray, LinearOperator}
857
+ The real-valued N-by-N matrix of the linear system.
858
+ Alternatively, ``A`` can be a linear operator which can
859
+ produce ``Ax`` and ``A^T x`` using, e.g.,
860
+ ``scipy.sparse.linalg.LinearOperator``.
861
+ b : ndarray
862
+ Right hand side of the linear system. Has shape (N,) or (N,1).
863
+ x0 : ndarray
864
+ Starting guess for the solution.
865
+ atol, rtol : float, optional
866
+ Parameters for the convergence test. For convergence,
867
+ ``norm(b - A @ x) <= max(rtol*norm(b), atol)`` should be satisfied.
868
+ The default is ``atol=0.`` and ``rtol=1e-5``.
869
+ maxiter : integer
870
+ Maximum number of iterations. Iteration will stop after maxiter
871
+ steps even if the specified tolerance has not been achieved.
872
+ M1 : {sparse array, ndarray, LinearOperator}
873
+ Left preconditioner for A.
874
+ M2 : {sparse array, ndarray, LinearOperator}
875
+ Right preconditioner for A. Used together with the left
876
+ preconditioner M1. The matrix M1@A@M2 should have better
877
+ conditioned than A alone.
878
+ callback : function
879
+ User-supplied function to call after each iteration. It is called
880
+ as callback(xk), where xk is the current solution vector.
881
+
882
+ Returns
883
+ -------
884
+ x : ndarray
885
+ The converged solution.
886
+ info : integer
887
+ Provides convergence information:
888
+ 0 : successful exit
889
+ >0 : convergence to tolerance not achieved, number of iterations
890
+ <0 : parameter breakdown
891
+
892
+ See Also
893
+ --------
894
+ LinearOperator
895
+
896
+ Examples
897
+ --------
898
+ >>> import numpy as np
899
+ >>> from scipy.sparse import csc_array
900
+ >>> from scipy.sparse.linalg import qmr
901
+ >>> A = csc_array([[3., 2., 0.], [1., -1., 0.], [0., 5., 1.]])
902
+ >>> b = np.array([2., 4., -1.])
903
+ >>> x, exitCode = qmr(A, b, atol=1e-5)
904
+ >>> print(exitCode) # 0 indicates successful convergence
905
+ 0
906
+ >>> np.allclose(A.dot(x), b)
907
+ True
908
+ """
909
+ A_ = A
910
+ A, M, x, b = make_system(A, None, x0, b)
911
+ bnrm2 = np.linalg.norm(b)
912
+
913
+ atol, _ = _get_atol_rtol('qmr', bnrm2, atol, rtol)
914
+
915
+ if bnrm2 == 0:
916
+ return b, 0
917
+
918
+ if M1 is None and M2 is None:
919
+ if hasattr(A_, 'psolve'):
920
+ def left_psolve(b):
921
+ return A_.psolve(b, 'left')
922
+
923
+ def right_psolve(b):
924
+ return A_.psolve(b, 'right')
925
+
926
+ def left_rpsolve(b):
927
+ return A_.rpsolve(b, 'left')
928
+
929
+ def right_rpsolve(b):
930
+ return A_.rpsolve(b, 'right')
931
+ M1 = LinearOperator(A.shape,
932
+ matvec=left_psolve,
933
+ rmatvec=left_rpsolve)
934
+ M2 = LinearOperator(A.shape,
935
+ matvec=right_psolve,
936
+ rmatvec=right_rpsolve)
937
+ else:
938
+ def id(b):
939
+ return b
940
+ M1 = LinearOperator(A.shape, matvec=id, rmatvec=id)
941
+ M2 = LinearOperator(A.shape, matvec=id, rmatvec=id)
942
+
943
+ n = len(b)
944
+ if maxiter is None:
945
+ maxiter = n*10
946
+
947
+ dotprod = np.vdot if np.iscomplexobj(x) else np.dot
948
+
949
+ rhotol = np.finfo(x.dtype.char).eps
950
+ betatol = rhotol
951
+ gammatol = rhotol
952
+ deltatol = rhotol
953
+ epsilontol = rhotol
954
+ xitol = rhotol
955
+
956
+ r = b - A.matvec(x) if x.any() else b.copy()
957
+
958
+ vtilde = r.copy()
959
+ y = M1.matvec(vtilde)
960
+ rho = np.linalg.norm(y)
961
+ wtilde = r.copy()
962
+ z = M2.rmatvec(wtilde)
963
+ xi = np.linalg.norm(z)
964
+ gamma, eta, theta = 1, -1, 0
965
+ v = np.empty_like(vtilde)
966
+ w = np.empty_like(wtilde)
967
+
968
+ # Dummy values to initialize vars, silence linter warnings
969
+ epsilon, q, d, p, s = None, None, None, None, None
970
+
971
+ for iteration in range(maxiter):
972
+ if np.linalg.norm(r) < atol: # Are we done?
973
+ return x, 0
974
+ if np.abs(rho) < rhotol: # rho breakdown
975
+ return x, -10
976
+ if np.abs(xi) < xitol: # xi breakdown
977
+ return x, -15
978
+
979
+ v[:] = vtilde[:]
980
+ v *= (1 / rho)
981
+ y *= (1 / rho)
982
+ w[:] = wtilde[:]
983
+ w *= (1 / xi)
984
+ z *= (1 / xi)
985
+ delta = dotprod(z, y)
986
+
987
+ if np.abs(delta) < deltatol: # delta breakdown
988
+ return x, -13
989
+
990
+ ytilde = M2.matvec(y)
991
+ ztilde = M1.rmatvec(z)
992
+
993
+ if iteration > 0:
994
+ ytilde -= (xi * delta / epsilon) * p
995
+ p[:] = ytilde[:]
996
+ ztilde -= (rho * (delta / epsilon).conj()) * q
997
+ q[:] = ztilde[:]
998
+ else: # First spin
999
+ p = ytilde.copy()
1000
+ q = ztilde.copy()
1001
+
1002
+ ptilde = A.matvec(p)
1003
+ epsilon = dotprod(q, ptilde)
1004
+ if np.abs(epsilon) < epsilontol: # epsilon breakdown
1005
+ return x, -14
1006
+
1007
+ beta = epsilon / delta
1008
+ if np.abs(beta) < betatol: # beta breakdown
1009
+ return x, -11
1010
+
1011
+ vtilde[:] = ptilde[:]
1012
+ vtilde -= beta*v
1013
+ y = M1.matvec(vtilde)
1014
+
1015
+ rho_prev = rho
1016
+ rho = np.linalg.norm(y)
1017
+ wtilde[:] = w[:]
1018
+ wtilde *= - beta.conj()
1019
+ wtilde += A.rmatvec(q)
1020
+ z = M2.rmatvec(wtilde)
1021
+ xi = np.linalg.norm(z)
1022
+ gamma_prev = gamma
1023
+ theta_prev = theta
1024
+ theta = rho / (gamma_prev * np.abs(beta))
1025
+ gamma = 1 / np.sqrt(1 + theta**2)
1026
+
1027
+ if np.abs(gamma) < gammatol: # gamma breakdown
1028
+ return x, -12
1029
+
1030
+ eta *= -(rho_prev / beta) * (gamma / gamma_prev)**2
1031
+
1032
+ if iteration > 0:
1033
+ d *= (theta_prev * gamma) ** 2
1034
+ d += eta*p
1035
+ s *= (theta_prev * gamma) ** 2
1036
+ s += eta*ptilde
1037
+ else:
1038
+ d = p.copy()
1039
+ d *= eta
1040
+ s = ptilde.copy()
1041
+ s *= eta
1042
+
1043
+ x += d
1044
+ r -= s
1045
+
1046
+ if callback:
1047
+ callback(x)
1048
+
1049
+ else: # for loop exhausted
1050
+ # Return incomplete progress
1051
+ return x, maxiter