endoreg-db 0.3.5__py3-none-any.whl → 0.3.6__py3-none-any.whl

endoreg_db/data/examination/time/data.yaml

@@ -1,48 +1,48 @@
-- model: report.ExaminationTime
-  fields:
-    name: "colonoscopy-total-time"
-    name_de: "Koloskopie Zeiten"
-    name_en: "Colonoscopy Times"
-    time_types: [
-      "colonoscopy-time"
-    ]
-  
-# withdrawal-time
-- model: report.ExaminationTime
-  fields:
-    name: "withdrawal-time"
-    name_de: "Withdrawal Time"
-    name_en: "Withdrawal Time"
-    time_types: [
-      "colonoscopy-time"
-    ]
-
-# cecum-time
-- model: report.ExaminationTime
-  fields:
-    name: "cecum-time"
-    name_de: "Zökum Zeit"
-    name_en: "Cecum Time"
-    time_types: [
-      "colonoscopy-time"
-    ]
-
-# intubation-time
-- model: report.ExaminationTime
-  fields:
-    name: "intubation-time"
-    name_de: "Intubationszeit"
-    name_en: "Intubation Time"
-    time_types: [
-      "colonoscopy-time"
-    ]
-
-# colonoscopy-intervention-time
-- model: report.ExaminationTimeType
-  fields:
-    name: "colonoscopy-intervention-time"
-    name_de: "Interventionszeit"
-    name_en: "Intervention Time"
-    time_types: [
-      "colonoscopy-time"
+- model: report.ExaminationTime
+  fields:
+    name: "colonoscopy-total-time"
+    name_de: "Koloskopie Zeiten"
+    name_en: "Colonoscopy Times"
+    time_types: [
+      "colonoscopy-time"
+    ]
+  
+# withdrawal-time
+- model: report.ExaminationTime
+  fields:
+    name: "withdrawal-time"
+    name_de: "Withdrawal Time"
+    name_en: "Withdrawal Time"
+    time_types: [
+      "colonoscopy-time"
+    ]
+
+# cecum-time
+- model: report.ExaminationTime
+  fields:
+    name: "cecum-time"
+    name_de: "Zökum Zeit"
+    name_en: "Cecum Time"
+    time_types: [
+      "colonoscopy-time"
+    ]
+
+# intubation-time
+- model: report.ExaminationTime
+  fields:
+    name: "intubation-time"
+    name_de: "Intubationszeit"
+    name_en: "Intubation Time"
+    time_types: [
+      "colonoscopy-time"
+    ]
+
+# colonoscopy-intervention-time
+- model: report.ExaminationTimeType
+  fields:
+    name: "colonoscopy-intervention-time"
+    name_de: "Interventionszeit"
+    name_en: "Intervention Time"
+    time_types: [
+      "colonoscopy-time"
     ]

endoreg_db/data/examination/time-type/data.yaml

@@ -1,8 +1,8 @@
-- model:
-  fields:
-    name: "colonoscopy-time"
-    name_de: "Koloskopie-Zeit"
-    name_en: "Colonoscopy Time"
-    examinations: [
-      "colonoscopy"
+- model:
+  fields:
+    name: "colonoscopy-time"
+    name_de: "Koloskopie-Zeit"
+    name_en: "Colonoscopy Time"
+    examinations: [
+      "colonoscopy"
     ]

endoreg_db/data/examination/type/data.yaml

@@ -1,5 +1,5 @@
-- model: report.ExaminationType
-  fields:
-    name: "endoscopy"
-    name_de: "Endoskopie"
-    name_en: "Endoscopy"
+- model: report.ExaminationType
+  fields:
+    name: "endoscopy"
+    name_de: "Endoskopie"
+    name_en: "Endoscopy"

endoreg_db/data/gender/data.yaml

@@ -1,18 +1,18 @@
-- model: endoreg_db.gender
-  fields:
-    name: "male"
-    name_de: "männlich"
-    name_en: "male"
-    abbreviation: "m"
-- model: endoreg_db.gender
-  fields:
-    name: "female"
-    name_de: "weiblich"
-    name_en: "female"
-    abbreviation: "f"
-- model: endoreg_db.gender
-  fields:
-    name: "other"
-    name_de: "andere"
-    name_en: "other"
-    abbreviation: "x"
+- model: endoreg_db.gender
+  fields:
+    name: "male"
+    name_de: "männlich"
+    name_en: "male"
+    abbreviation: "m"
+- model: endoreg_db.gender
+  fields:
+    name: "female"
+    name_de: "weiblich"
+    name_en: "female"
+    abbreviation: "f"
+- model: endoreg_db.gender
+  fields:
+    name: "other"
+    name_de: "andere"
+    name_en: "other"
+    abbreviation: "x"

endoreg_db/data/information_source/data.yaml

@@ -1,30 +1,30 @@
-- model: endoreg_db.InformationSource
-  fields:
-    name: treating_physician
-- model: endoreg_db.InformationSource
-  fields:
-    name: treating_physician_anamnestic
-- model: endoreg_db.InformationSource
-  fields:
-    name: physicians_note_anamnestic
-- model: endoreg_db.InformationSource
-  fields:
-    name: patient_anamnestic
-- model: endoreg_db.InformationSource
-  fields:
-    name: physical_measurement
-- model: endoreg_db.InformationSource
-  fields:
-    name: family_anamnestic
-- model: endoreg_db.InformationSource
-  fields:
-    name: physical_examination
-- model: endoreg_db.InformationSource
-  fields:
-    name: unknown
-- model: endoreg_db.InformationSource
-  fields:
-    name: prediction
-- model: endoreg_db.InformationSource
-  fields:
-    name: annotation
+- model: endoreg_db.InformationSource
+  fields:
+    name: treating_physician
+- model: endoreg_db.InformationSource
+  fields:
+    name: treating_physician_anamnestic
+- model: endoreg_db.InformationSource
+  fields:
+    name: physicians_note_anamnestic
+- model: endoreg_db.InformationSource
+  fields:
+    name: patient_anamnestic
+- model: endoreg_db.InformationSource
+  fields:
+    name: physical_measurement
+- model: endoreg_db.InformationSource
+  fields:
+    name: family_anamnestic
+- model: endoreg_db.InformationSource
+  fields:
+    name: physical_examination
+- model: endoreg_db.InformationSource
+  fields:
+    name: unknown
+- model: endoreg_db.InformationSource
+  fields:
+    name: prediction
+- model: endoreg_db.InformationSource
+  fields:
+    name: annotation

endoreg_db/data/information_source/medication.yaml

@@ -1,6 +1,6 @@
-- model: endoreg_db.InformationSource
-  fields:
-    name: "fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"
-    name_de: "Fachinformation Apixaban (Eliquis) 2.5mg, Bristol Meyer Squibbs"
-    name_en: "Apixaban (Eliquis) 2.5mg, Bristol Meyer Squibbs"
+- model: endoreg_db.InformationSource
+  fields:
+    name: "fachinformation-apixaban-eliquis_2.5mg-bristol_meyer_squibbs"
+    name_de: "Fachinformation Apixaban (Eliquis) 2.5mg, Bristol Meyer Squibbs"
+    name_en: "Apixaban (Eliquis) 2.5mg, Bristol Meyer Squibbs"
     date: "2024-04-28"

endoreg_db/data/lab_value/cardiac_enzymes.yaml

@@ -1,31 +1,31 @@
-# Creatine kinase: Female: 30–135 U/L; male: 55–170 U/L 
-# Creatine kinase MB (CKMB): ˂5% of total 
-# Troponin: ≤0.04 ng/mL
-
-- model: endoreg_db.lab_value
-  fields:
-    name: "creatine_kinase"
-    name_de: "Kreatinkinase"
-    name_en: "Creatine Kinase"
-    abbreviation: "CK"
-    default_unit: "units per liter"
-    normal_range_gender_dependent: true
-    default_normal_range: {
-      "female": {
-        "min": 30,
-        "max": 135
-      },
-      "male": {
-        "min": 55,
-        "max": 170
-      }
-    }
-
-- model: endoreg_db.lab_value
-  fields:
-    name: "creatine_kinase_mb_fraction"
-    name_de: "Kreatinkinase MB"
-    name_en: "Creatine Kinase MB"
-    abbreviation: "CKMB%"
-    default_unit: "percent"
+# Creatine kinase: Female: 30–135 U/L; male: 55–170 U/L 
+# Creatine kinase MB (CKMB): ˂5% of total 
+# Troponin: ≤0.04 ng/mL
+
+- model: endoreg_db.lab_value
+  fields:
+    name: "creatine_kinase"
+    name_de: "Kreatinkinase"
+    name_en: "Creatine Kinase"
+    abbreviation: "CK"
+    default_unit: "units per liter"
+    normal_range_gender_dependent: true
+    default_normal_range: {
+      "female": {
+        "min": 30,
+        "max": 135
+      },
+      "male": {
+        "min": 55,
+        "max": 170
+      }
+    }
+
+- model: endoreg_db.lab_value
+  fields:
+    name: "creatine_kinase_mb_fraction"
+    name_de: "Kreatinkinase MB"
+    name_en: "Creatine Kinase MB"
+    abbreviation: "CKMB%"
+    default_unit: "percent"
     default_normal_range: {"max": 5}

endoreg_db/data/lab_value/coagulation.yaml

@@ -1,49 +1,49 @@
-# Prothrombin time: 11–13 seconds 
-- model: endoreg_db.lab_value
-  fields:
-    name: "prothrombin_time"
-    name_de: "Prothrombinzeit"
-    name_en: "Prothrombin time"
-    abbreviation: "PTT"
-    default_unit: "seconds"
-    default_normal_range: {"min": 11, "max": 13}
-
-# International normalized ratio (INR): 0.9-1.2
-- model: endoreg_db.lab_value
-  fields:
-    name: "international_normalized_ratio"
-    name_de: "International Normalisierte Ratio"
-    name_en: "International normalized ratio"
-    abbreviation: "INR"
-    default_unit: "ratio"
-    default_normal_range: {"min": 0.9, "max": 1.2}
-
-# Activated partial thromboplastin time (aPTT): 25–35 seconds 
-- model: endoreg_db.lab_value
-  fields:
-    name: "activated_partial_thromboplastin_time"
-    name_de: "Aktivierte partielle Thromboplastinzeit"
-    name_en: "Activated partial thromboplastin time"
-    abbreviation: "aPTT"
-    default_unit: "seconds"
-    default_normal_range: {"min": 25, "max": 35}
-
-# Fibrinogen: 150-350 mg/dL (1.5-3.5 g/L)
-- model: endoreg_db.lab_value
-  fields:
-    name: "fibrinogen"
-    name_de: "Fibrinogen"
-    name_en: "Fibrinogen"
-    abbreviation: "Fib"
-    default_unit: "miligram per deciliter"
-    default_normal_range: {"min": 150, "max": 350}
-
-# Bleeding time:  <8 minutes
-- model: endoreg_db.lab_value
-  fields:
-    name: "bleeding_time"
-    name_de: "Blutungszeit"
-    name_en: "Bleeding time"
-    abbreviation: "BT"
-    default_unit: "minutes"
+# Prothrombin time: 11–13 seconds 
+- model: endoreg_db.lab_value
+  fields:
+    name: "prothrombin_time"
+    name_de: "Prothrombinzeit"
+    name_en: "Prothrombin time"
+    abbreviation: "PTT"
+    default_unit: "seconds"
+    default_normal_range: {"min": 11, "max": 13}
+
+# International normalized ratio (INR): 0.9-1.2
+- model: endoreg_db.lab_value
+  fields:
+    name: "international_normalized_ratio"
+    name_de: "International Normalisierte Ratio"
+    name_en: "International normalized ratio"
+    abbreviation: "INR"
+    default_unit: "ratio"
+    default_normal_range: {"min": 0.9, "max": 1.2}
+
+# Activated partial thromboplastin time (aPTT): 25–35 seconds 
+- model: endoreg_db.lab_value
+  fields:
+    name: "activated_partial_thromboplastin_time"
+    name_de: "Aktivierte partielle Thromboplastinzeit"
+    name_en: "Activated partial thromboplastin time"
+    abbreviation: "aPTT"
+    default_unit: "seconds"
+    default_normal_range: {"min": 25, "max": 35}
+
+# Fibrinogen: 150-350 mg/dL (1.5-3.5 g/L)
+- model: endoreg_db.lab_value
+  fields:
+    name: "fibrinogen"
+    name_de: "Fibrinogen"
+    name_en: "Fibrinogen"
+    abbreviation: "Fib"
+    default_unit: "miligram per deciliter"
+    default_normal_range: {"min": 150, "max": 350}
+
+# Bleeding time:  <8 minutes
+- model: endoreg_db.lab_value
+  fields:
+    name: "bleeding_time"
+    name_de: "Blutungszeit"
+    name_en: "Bleeding time"
+    abbreviation: "BT"
+    default_unit: "minutes"
     default_normal_range: {"max": 8}