brainstate 0.1.7__py2.py3-none-any.whl → 0.1.9__py2.py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (133) hide show
  1. brainstate/__init__.py +58 -51
  2. brainstate/_compatible_import.py +148 -148
  3. brainstate/_state.py +1605 -1663
  4. brainstate/_state_test.py +52 -52
  5. brainstate/_utils.py +47 -47
  6. brainstate/augment/__init__.py +30 -30
  7. brainstate/augment/_autograd.py +778 -778
  8. brainstate/augment/_autograd_test.py +1289 -1289
  9. brainstate/augment/_eval_shape.py +99 -99
  10. brainstate/augment/_eval_shape_test.py +38 -38
  11. brainstate/augment/_mapping.py +1060 -1060
  12. brainstate/augment/_mapping_test.py +597 -597
  13. brainstate/augment/_random.py +151 -151
  14. brainstate/compile/__init__.py +38 -38
  15. brainstate/compile/_ad_checkpoint.py +204 -204
  16. brainstate/compile/_ad_checkpoint_test.py +49 -49
  17. brainstate/compile/_conditions.py +256 -256
  18. brainstate/compile/_conditions_test.py +220 -220
  19. brainstate/compile/_error_if.py +92 -92
  20. brainstate/compile/_error_if_test.py +52 -52
  21. brainstate/compile/_jit.py +346 -346
  22. brainstate/compile/_jit_test.py +143 -143
  23. brainstate/compile/_loop_collect_return.py +536 -536
  24. brainstate/compile/_loop_collect_return_test.py +58 -58
  25. brainstate/compile/_loop_no_collection.py +184 -184
  26. brainstate/compile/_loop_no_collection_test.py +50 -50
  27. brainstate/compile/_make_jaxpr.py +888 -888
  28. brainstate/compile/_make_jaxpr_test.py +156 -146
  29. brainstate/compile/_progress_bar.py +202 -202
  30. brainstate/compile/_unvmap.py +159 -159
  31. brainstate/compile/_util.py +147 -147
  32. brainstate/environ.py +563 -563
  33. brainstate/environ_test.py +62 -62
  34. brainstate/functional/__init__.py +27 -26
  35. brainstate/graph/__init__.py +29 -29
  36. brainstate/graph/_graph_node.py +244 -244
  37. brainstate/graph/_graph_node_test.py +73 -73
  38. brainstate/graph/_graph_operation.py +1738 -1738
  39. brainstate/graph/_graph_operation_test.py +563 -563
  40. brainstate/init/__init__.py +26 -26
  41. brainstate/init/_base.py +52 -52
  42. brainstate/init/_generic.py +244 -244
  43. brainstate/init/_random_inits.py +553 -553
  44. brainstate/init/_random_inits_test.py +149 -149
  45. brainstate/init/_regular_inits.py +105 -105
  46. brainstate/init/_regular_inits_test.py +50 -50
  47. brainstate/mixin.py +365 -363
  48. brainstate/mixin_test.py +77 -73
  49. brainstate/nn/__init__.py +135 -131
  50. brainstate/{functional → nn}/_activations.py +808 -813
  51. brainstate/{functional → nn}/_activations_test.py +331 -331
  52. brainstate/nn/_collective_ops.py +514 -514
  53. brainstate/nn/_collective_ops_test.py +43 -43
  54. brainstate/nn/_common.py +178 -178
  55. brainstate/nn/_conv.py +501 -501
  56. brainstate/nn/_conv_test.py +238 -238
  57. brainstate/nn/_delay.py +509 -470
  58. brainstate/nn/_delay_test.py +238 -0
  59. brainstate/nn/_dropout.py +426 -426
  60. brainstate/nn/_dropout_test.py +100 -100
  61. brainstate/nn/_dynamics.py +1343 -1361
  62. brainstate/nn/_dynamics_test.py +78 -78
  63. brainstate/nn/_elementwise.py +1119 -1120
  64. brainstate/nn/_elementwise_test.py +169 -169
  65. brainstate/nn/_embedding.py +58 -58
  66. brainstate/nn/_exp_euler.py +92 -92
  67. brainstate/nn/_exp_euler_test.py +35 -35
  68. brainstate/nn/_fixedprob.py +239 -239
  69. brainstate/nn/_fixedprob_test.py +114 -114
  70. brainstate/nn/_inputs.py +608 -608
  71. brainstate/nn/_linear.py +424 -424
  72. brainstate/nn/_linear_mv.py +83 -83
  73. brainstate/nn/_linear_mv_test.py +120 -120
  74. brainstate/nn/_linear_test.py +107 -107
  75. brainstate/nn/_ltp.py +28 -28
  76. brainstate/nn/_module.py +377 -377
  77. brainstate/nn/_module_test.py +40 -208
  78. brainstate/nn/_neuron.py +705 -705
  79. brainstate/nn/_neuron_test.py +161 -161
  80. brainstate/nn/_normalizations.py +975 -918
  81. brainstate/nn/_normalizations_test.py +73 -73
  82. brainstate/{functional → nn}/_others.py +46 -46
  83. brainstate/nn/_poolings.py +1177 -1177
  84. brainstate/nn/_poolings_test.py +217 -217
  85. brainstate/nn/_projection.py +486 -486
  86. brainstate/nn/_rate_rnns.py +554 -554
  87. brainstate/nn/_rate_rnns_test.py +63 -63
  88. brainstate/nn/_readout.py +209 -209
  89. brainstate/nn/_readout_test.py +53 -53
  90. brainstate/nn/_stp.py +236 -236
  91. brainstate/nn/_synapse.py +505 -505
  92. brainstate/nn/_synapse_test.py +131 -131
  93. brainstate/nn/_synaptic_projection.py +423 -423
  94. brainstate/nn/_synouts.py +162 -162
  95. brainstate/nn/_synouts_test.py +57 -57
  96. brainstate/nn/_utils.py +89 -89
  97. brainstate/nn/metrics.py +388 -388
  98. brainstate/optim/__init__.py +38 -38
  99. brainstate/optim/_base.py +64 -64
  100. brainstate/optim/_lr_scheduler.py +448 -448
  101. brainstate/optim/_lr_scheduler_test.py +50 -50
  102. brainstate/optim/_optax_optimizer.py +152 -152
  103. brainstate/optim/_optax_optimizer_test.py +53 -53
  104. brainstate/optim/_sgd_optimizer.py +1104 -1104
  105. brainstate/random/__init__.py +24 -24
  106. brainstate/random/_rand_funs.py +3616 -3616
  107. brainstate/random/_rand_funs_test.py +567 -567
  108. brainstate/random/_rand_seed.py +210 -210
  109. brainstate/random/_rand_seed_test.py +48 -48
  110. brainstate/random/_rand_state.py +1409 -1409
  111. brainstate/random/_random_for_unit.py +52 -52
  112. brainstate/surrogate.py +1957 -1957
  113. brainstate/transform.py +23 -23
  114. brainstate/typing.py +304 -304
  115. brainstate/util/__init__.py +50 -50
  116. brainstate/util/caller.py +98 -98
  117. brainstate/util/error.py +55 -55
  118. brainstate/util/filter.py +469 -469
  119. brainstate/util/others.py +540 -540
  120. brainstate/util/pretty_pytree.py +945 -945
  121. brainstate/util/pretty_pytree_test.py +159 -159
  122. brainstate/util/pretty_repr.py +328 -328
  123. brainstate/util/pretty_table.py +2954 -2954
  124. brainstate/util/scaling.py +258 -258
  125. brainstate/util/struct.py +523 -523
  126. {brainstate-0.1.7.dist-info → brainstate-0.1.9.dist-info}/METADATA +91 -99
  127. brainstate-0.1.9.dist-info/RECORD +130 -0
  128. {brainstate-0.1.7.dist-info → brainstate-0.1.9.dist-info}/WHEEL +1 -1
  129. {brainstate-0.1.7.dist-info → brainstate-0.1.9.dist-info/licenses}/LICENSE +202 -202
  130. brainstate/functional/_normalization.py +0 -81
  131. brainstate/functional/_spikes.py +0 -204
  132. brainstate-0.1.7.dist-info/RECORD +0 -131
  133. {brainstate-0.1.7.dist-info → brainstate-0.1.9.dist-info}/top_level.txt +0 -0
@@ -1,50 +1,50 @@
1
- # Copyright 2024 BDP Ecosystem Limited. All Rights Reserved.
2
- #
3
- # Licensed under the Apache License, Version 2.0 (the "License");
4
- # you may not use this file except in compliance with the License.
5
- # You may obtain a copy of the License at
6
- #
7
- # http://www.apache.org/licenses/LICENSE-2.0
8
- #
9
- # Unless required by applicable law or agreed to in writing, software
10
- # distributed under the License is distributed on an "AS IS" BASIS,
11
- # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12
- # See the License for the specific language governing permissions and
13
- # limitations under the License.
14
- # ==============================================================================
15
-
16
- from . import filter
17
- from .error import *
18
- from .error import __all__ as _error_all
19
- from .others import *
20
- from .others import __all__ as _others_all
21
- from .pretty_pytree import *
22
- from .pretty_pytree import __all__ as _mapping_all
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- from .pretty_repr import *
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- from .pretty_repr import __all__ as _pretty_repr_all
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- from .pretty_table import *
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- from .pretty_table import __all__ as _table_all
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- from .scaling import *
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- from .scaling import __all__ as _mem_scale_all
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- from .struct import *
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- from .struct import __all__ as _struct_all
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-
32
- __all__ = (
33
- ['filter']
34
- + _others_all
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- + _mem_scale_all
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- + _pretty_repr_all
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- + _struct_all
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- + _error_all
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- + _mapping_all
40
- + _table_all
41
- )
42
- del (
43
- _others_all,
44
- _mem_scale_all,
45
- _pretty_repr_all,
46
- _struct_all,
47
- _error_all,
48
- _mapping_all,
49
- _table_all,
50
- )
1
+ # Copyright 2024 BDP Ecosystem Limited. All Rights Reserved.
2
+ #
3
+ # Licensed under the Apache License, Version 2.0 (the "License");
4
+ # you may not use this file except in compliance with the License.
5
+ # You may obtain a copy of the License at
6
+ #
7
+ # http://www.apache.org/licenses/LICENSE-2.0
8
+ #
9
+ # Unless required by applicable law or agreed to in writing, software
10
+ # distributed under the License is distributed on an "AS IS" BASIS,
11
+ # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12
+ # See the License for the specific language governing permissions and
13
+ # limitations under the License.
14
+ # ==============================================================================
15
+
16
+ from . import filter
17
+ from .error import *
18
+ from .error import __all__ as _error_all
19
+ from .others import *
20
+ from .others import __all__ as _others_all
21
+ from .pretty_pytree import *
22
+ from .pretty_pytree import __all__ as _mapping_all
23
+ from .pretty_repr import *
24
+ from .pretty_repr import __all__ as _pretty_repr_all
25
+ from .pretty_table import *
26
+ from .pretty_table import __all__ as _table_all
27
+ from .scaling import *
28
+ from .scaling import __all__ as _mem_scale_all
29
+ from .struct import *
30
+ from .struct import __all__ as _struct_all
31
+
32
+ __all__ = (
33
+ ['filter']
34
+ + _others_all
35
+ + _mem_scale_all
36
+ + _pretty_repr_all
37
+ + _struct_all
38
+ + _error_all
39
+ + _mapping_all
40
+ + _table_all
41
+ )
42
+ del (
43
+ _others_all,
44
+ _mem_scale_all,
45
+ _pretty_repr_all,
46
+ _struct_all,
47
+ _error_all,
48
+ _mapping_all,
49
+ _table_all,
50
+ )
brainstate/util/caller.py CHANGED
@@ -1,98 +1,98 @@
1
- # The file is adapted from the Flax library (https://github.com/google/flax).
2
- # The credit should go to the Flax authors.
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- #
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- # Copyright 2024 The Flax Authors.
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- #
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- # Licensed under the Apache License, Version 2.0 (the "License");
7
- # you may not use this file except in compliance with the License.
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- # You may obtain a copy of the License at
9
- #
10
- # http://www.apache.org/licenses/LICENSE-2.0
11
- #
12
- # Unless required by applicable law or agreed to in writing, software
13
- # distributed under the License is distributed on an "AS IS" BASIS,
14
- # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
15
- # See the License for the specific language governing permissions and
16
- # limitations under the License.
17
-
18
- import dataclasses
19
- from typing import Any, TypeVar, Protocol, Generic
20
-
21
- import jax
22
-
23
- __all__ = [
24
- 'DelayedAccessor',
25
- 'CallableProxy',
26
- 'ApplyCaller',
27
- ]
28
-
29
- A = TypeVar('A', covariant=True) # type: ignore[not-supported-yet]
30
-
31
-
32
- def _identity(x):
33
- return x
34
-
35
-
36
- @dataclasses.dataclass(frozen=True)
37
- class GetItem:
38
- key: Any
39
-
40
-
41
- @dataclasses.dataclass(frozen=True)
42
- class GetAttr:
43
- name: str
44
-
45
-
46
- @dataclasses.dataclass(frozen=True)
47
- class DelayedAccessor:
48
- actions: tuple[GetItem | GetAttr, ...] = ()
49
-
50
- def __call__(self, x):
51
- for action in self.actions:
52
- if isinstance(action, GetItem):
53
- x = x[action.key]
54
- elif isinstance(action, GetAttr):
55
- x = getattr(x, action.name)
56
- return x
57
-
58
- def __getattr__(self, name):
59
- return DelayedAccessor(self.actions + (GetAttr(name),))
60
-
61
- def __getitem__(self, key):
62
- return DelayedAccessor(self.actions + (GetItem(key),))
63
-
64
-
65
- jax.tree_util.register_static(DelayedAccessor)
66
-
67
-
68
- class _AccessorCall(Protocol):
69
- def __call__(self, accessor: DelayedAccessor, /, *args, **kwargs) -> Any:
70
- ...
71
-
72
-
73
- class CallableProxy:
74
- def __init__(
75
- self, fun: _AccessorCall, accessor: DelayedAccessor | None = None
76
- ):
77
- self._callable = fun
78
- self._accessor = DelayedAccessor() if accessor is None else accessor
79
-
80
- def __call__(self, *args, **kwargs):
81
- return self._callable(self._accessor, *args, **kwargs)
82
-
83
- def __getattr__(self, name) -> 'CallableProxy':
84
- return CallableProxy(self._callable, getattr(self._accessor, name))
85
-
86
- def __getitem__(self, key) -> 'CallableProxy':
87
- return CallableProxy(self._callable, self._accessor[key])
88
-
89
-
90
- class ApplyCaller(Protocol, Generic[A]):
91
- def __getattr__(self, __name) -> 'ApplyCaller[A]':
92
- ...
93
-
94
- def __getitem__(self, __name) -> 'ApplyCaller[A]':
95
- ...
96
-
97
- def __call__(self, *args, **kwargs) -> tuple[Any, A]:
98
- ...
1
+ # The file is adapted from the Flax library (https://github.com/google/flax).
2
+ # The credit should go to the Flax authors.
3
+ #
4
+ # Copyright 2024 The Flax Authors.
5
+ #
6
+ # Licensed under the Apache License, Version 2.0 (the "License");
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+ # you may not use this file except in compliance with the License.
8
+ # You may obtain a copy of the License at
9
+ #
10
+ # http://www.apache.org/licenses/LICENSE-2.0
11
+ #
12
+ # Unless required by applicable law or agreed to in writing, software
13
+ # distributed under the License is distributed on an "AS IS" BASIS,
14
+ # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
15
+ # See the License for the specific language governing permissions and
16
+ # limitations under the License.
17
+
18
+ import dataclasses
19
+ from typing import Any, TypeVar, Protocol, Generic
20
+
21
+ import jax
22
+
23
+ __all__ = [
24
+ 'DelayedAccessor',
25
+ 'CallableProxy',
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+ 'ApplyCaller',
27
+ ]
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+
29
+ A = TypeVar('A', covariant=True) # type: ignore[not-supported-yet]
30
+
31
+
32
+ def _identity(x):
33
+ return x
34
+
35
+
36
+ @dataclasses.dataclass(frozen=True)
37
+ class GetItem:
38
+ key: Any
39
+
40
+
41
+ @dataclasses.dataclass(frozen=True)
42
+ class GetAttr:
43
+ name: str
44
+
45
+
46
+ @dataclasses.dataclass(frozen=True)
47
+ class DelayedAccessor:
48
+ actions: tuple[GetItem | GetAttr, ...] = ()
49
+
50
+ def __call__(self, x):
51
+ for action in self.actions:
52
+ if isinstance(action, GetItem):
53
+ x = x[action.key]
54
+ elif isinstance(action, GetAttr):
55
+ x = getattr(x, action.name)
56
+ return x
57
+
58
+ def __getattr__(self, name):
59
+ return DelayedAccessor(self.actions + (GetAttr(name),))
60
+
61
+ def __getitem__(self, key):
62
+ return DelayedAccessor(self.actions + (GetItem(key),))
63
+
64
+
65
+ jax.tree_util.register_static(DelayedAccessor)
66
+
67
+
68
+ class _AccessorCall(Protocol):
69
+ def __call__(self, accessor: DelayedAccessor, /, *args, **kwargs) -> Any:
70
+ ...
71
+
72
+
73
+ class CallableProxy:
74
+ def __init__(
75
+ self, fun: _AccessorCall, accessor: DelayedAccessor | None = None
76
+ ):
77
+ self._callable = fun
78
+ self._accessor = DelayedAccessor() if accessor is None else accessor
79
+
80
+ def __call__(self, *args, **kwargs):
81
+ return self._callable(self._accessor, *args, **kwargs)
82
+
83
+ def __getattr__(self, name) -> 'CallableProxy':
84
+ return CallableProxy(self._callable, getattr(self._accessor, name))
85
+
86
+ def __getitem__(self, key) -> 'CallableProxy':
87
+ return CallableProxy(self._callable, self._accessor[key])
88
+
89
+
90
+ class ApplyCaller(Protocol, Generic[A]):
91
+ def __getattr__(self, __name) -> 'ApplyCaller[A]':
92
+ ...
93
+
94
+ def __getitem__(self, __name) -> 'ApplyCaller[A]':
95
+ ...
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+
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+ def __call__(self, *args, **kwargs) -> tuple[Any, A]:
98
+ ...
brainstate/util/error.py CHANGED
@@ -1,55 +1,55 @@
1
- # Copyright 2024 BDP Ecosystem Limited. All Rights Reserved.
2
- #
3
- # Licensed under the Apache License, Version 2.0 (the "License");
4
- # you may not use this file except in compliance with the License.
5
- # You may obtain a copy of the License at
6
- #
7
- # http://www.apache.org/licenses/LICENSE-2.0
8
- #
9
- # Unless required by applicable law or agreed to in writing, software
10
- # distributed under the License is distributed on an "AS IS" BASIS,
11
- # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12
- # See the License for the specific language governing permissions and
13
- # limitations under the License.
14
- # ==============================================================================
15
-
16
-
17
- __all__ = [
18
- 'BrainStateError',
19
- 'TraceContextError',
20
- ]
21
-
22
-
23
- class BrainStateError(Exception):
24
- """
25
- A custom exception class for BrainState-related errors.
26
-
27
- This exception is raised when a BrainState-specific error occurs during
28
- the execution of the program. It serves as a base class for more specific
29
- BrainState exceptions.
30
-
31
- Attributes:
32
- Inherits all attributes from the built-in Exception class.
33
-
34
- Usage::
35
-
36
- raise BrainStateError("A BrainState-specific error occurred.")
37
- """
38
- pass
39
-
40
-
41
- class TraceContextError(BrainStateError):
42
- """
43
- A custom exception class for trace context-related errors in BrainState.
44
-
45
- This exception is raised when an error occurs specifically related to
46
- trace context operations or manipulations within the BrainState framework.
47
-
48
- Attributes:
49
- Inherits all attributes from the BrainStateError class.
50
-
51
- Usage::
52
-
53
- raise TraceContextError("An error occurred while handling trace context.")
54
- """
55
- pass
1
+ # Copyright 2024 BDP Ecosystem Limited. All Rights Reserved.
2
+ #
3
+ # Licensed under the Apache License, Version 2.0 (the "License");
4
+ # you may not use this file except in compliance with the License.
5
+ # You may obtain a copy of the License at
6
+ #
7
+ # http://www.apache.org/licenses/LICENSE-2.0
8
+ #
9
+ # Unless required by applicable law or agreed to in writing, software
10
+ # distributed under the License is distributed on an "AS IS" BASIS,
11
+ # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12
+ # See the License for the specific language governing permissions and
13
+ # limitations under the License.
14
+ # ==============================================================================
15
+
16
+
17
+ __all__ = [
18
+ 'BrainStateError',
19
+ 'TraceContextError',
20
+ ]
21
+
22
+
23
+ class BrainStateError(Exception):
24
+ """
25
+ A custom exception class for BrainState-related errors.
26
+
27
+ This exception is raised when a BrainState-specific error occurs during
28
+ the execution of the program. It serves as a base class for more specific
29
+ BrainState exceptions.
30
+
31
+ Attributes:
32
+ Inherits all attributes from the built-in Exception class.
33
+
34
+ Usage::
35
+
36
+ raise BrainStateError("A BrainState-specific error occurred.")
37
+ """
38
+ pass
39
+
40
+
41
+ class TraceContextError(BrainStateError):
42
+ """
43
+ A custom exception class for trace context-related errors in BrainState.
44
+
45
+ This exception is raised when an error occurs specifically related to
46
+ trace context operations or manipulations within the BrainState framework.
47
+
48
+ Attributes:
49
+ Inherits all attributes from the BrainStateError class.
50
+
51
+ Usage::
52
+
53
+ raise TraceContextError("An error occurred while handling trace context.")
54
+ """
55
+ pass