@opentrons/shared-data 0.1.7-alpha.0 → 0.2.0-alpha.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (372) hide show
  1. package/.coveragerc +4 -0
  2. package/.flake8 +31 -0
  3. package/Config.in +11 -0
  4. package/LICENSE +202 -0
  5. package/Makefile +13 -14
  6. package/Makefile-python.mk +134 -0
  7. package/buildroot.mk +35 -0
  8. package/command/index.ts +16 -2
  9. package/command/schemas/12.json +65 -0
  10. package/command/schemas/13.json +7039 -0
  11. package/command/schemas/14.json +7254 -0
  12. package/command/types/annotation.ts +1 -1
  13. package/command/types/calibration.ts +7 -6
  14. package/command/types/gantry.ts +7 -6
  15. package/command/types/incidental.ts +1 -1
  16. package/command/types/index.ts +79 -20
  17. package/command/types/module.ts +98 -11
  18. package/command/types/pipetting.ts +9 -3
  19. package/command/types/robot.ts +98 -0
  20. package/command/types/setup.ts +8 -8
  21. package/command/types/support.ts +14 -2
  22. package/command/types/timing.ts +1 -1
  23. package/command/types/unsafe.ts +63 -1
  24. package/deck/definitions/5/ot2_short_trash.json +37 -0
  25. package/deck/definitions/5/ot2_standard.json +37 -0
  26. package/deck/definitions/5/ot3_standard.json +152 -51
  27. package/deck/index.ts +3 -6
  28. package/deck/schemas/5.json +46 -1
  29. package/errors/definitions/1/errors.json +12 -0
  30. package/errors/index.ts +2 -1
  31. package/labware/definitions/2/agilent_1_reservoir_290ml/3.json +80 -0
  32. package/labware/definitions/2/appliedbiosystemsmicroamp_384_wellplate_40ul/3.json +4737 -0
  33. package/labware/definitions/2/axygen_96_wellplate_500ul/1.json +1036 -0
  34. package/labware/definitions/2/axygen_96_wellplate_500ul/2.json +1159 -0
  35. package/labware/definitions/2/biorad_384_wellplate_50ul/4.json +4748 -0
  36. package/labware/definitions/2/biorad_96_wellplate_200ul_pcr/4.json +1187 -0
  37. package/labware/definitions/2/corning_12_wellplate_6.9ml_flat/4.json +210 -0
  38. package/labware/definitions/2/corning_24_wellplate_3.4ml_flat/4.json +342 -0
  39. package/labware/definitions/2/corning_384_wellplate_112ul_flat/4.json +5116 -0
  40. package/labware/definitions/2/corning_48_wellplate_1.6ml_flat/4.json +605 -0
  41. package/labware/definitions/2/corning_48_wellplate_1.6ml_flat/5.json +610 -0
  42. package/labware/definitions/2/corning_6_wellplate_16.8ml_flat/4.json +134 -0
  43. package/labware/definitions/2/corning_96_wellplate_360ul_flat/4.json +1177 -0
  44. package/labware/definitions/2/corning_96_wellplate_360ul_lid/1.json +111 -0
  45. package/labware/definitions/2/ev_resin_tips_flex_96_labware/1.json +1 -1
  46. package/labware/definitions/2/ibidi_96_square_well_plate_300ul/1.json +1105 -0
  47. package/labware/definitions/2/ibidi_96_square_well_plate_300ul/2.json +1216 -0
  48. package/labware/definitions/2/ibidi_96_square_well_plate_300ul_lid/1.json +110 -0
  49. package/labware/definitions/2/nest_12_reservoir_22ml/1.json +232 -0
  50. package/labware/definitions/2/nest_1_reservoir_290ml/3.json +80 -0
  51. package/labware/definitions/2/nest_24_wellplate_10.4ml/1.json +386 -0
  52. package/labware/definitions/2/nest_8_reservoir_22ml/1.json +162 -0
  53. package/labware/definitions/2/nest_96_wellplate_100ul_pcr_full_skirt/4.json +1166 -0
  54. package/labware/definitions/2/nest_96_wellplate_200ul_flat/4.json +1145 -0
  55. package/labware/definitions/2/nest_96_wellplate_2ml_deep/4.json +1261 -0
  56. package/labware/definitions/2/opentrons_24_aluminumblock_nest_0.5ml_screwcap/3.json +370 -0
  57. package/labware/definitions/2/opentrons_24_tuberack_nest_0.5ml_screwcap/3.json +371 -0
  58. package/labware/definitions/2/opentrons_96_aluminumblock_generic_pcr_strip_200ul/4.json +1149 -0
  59. package/labware/definitions/2/opentrons_96_wellplate_200ul_pcr_full_skirt/4.json +1174 -0
  60. package/labware/definitions/2/opentrons_flex_96_filtertiprack_1000ul/1.json +5 -0
  61. package/labware/definitions/2/opentrons_flex_96_filtertiprack_200ul/1.json +5 -0
  62. package/labware/definitions/2/opentrons_flex_96_filtertiprack_20ul/1.json +5 -0
  63. package/labware/definitions/2/opentrons_flex_96_filtertiprack_50ul/1.json +5 -0
  64. package/labware/definitions/2/opentrons_flex_96_tiprack_1000ul/1.json +5 -0
  65. package/labware/definitions/2/opentrons_flex_96_tiprack_200ul/1.json +5 -0
  66. package/labware/definitions/2/opentrons_flex_96_tiprack_20ul/1.json +5 -0
  67. package/labware/definitions/2/opentrons_flex_96_tiprack_50ul/1.json +5 -0
  68. package/labware/definitions/2/opentrons_flex_tiprack_lid/1.json +15 -9
  69. package/labware/definitions/2/opentrons_tough_pcr_auto_sealing_lid/1.json +8 -0
  70. package/labware/definitions/2/opentrons_tough_universal_lid/1.json +16 -1
  71. package/labware/definitions/2/smc_384_read_plate/1.json +4701 -0
  72. package/labware/definitions/2/smc_384_read_plate/2.json +5100 -0
  73. package/labware/definitions/2/thermoscientificnunc_96_wellplate_1300ul/3.json +1141 -0
  74. package/labware/definitions/2/thermoscientificnunc_96_wellplate_2000ul/3.json +1141 -0
  75. package/labware/definitions/2/usascientific_12_reservoir_22ml/3.json +237 -0
  76. package/labware/definitions/2/usascientific_96_wellplate_2.4ml_deep/3.json +1243 -0
  77. package/labware/definitions/3/schema3test_96_well_aluminum_block/999.json +1050 -0
  78. package/labware/definitions/3/schema3test_96_wellplate_200ul_pcr_full_skirt/999.json +1202 -0
  79. package/labware/definitions/3/schema3test_aluminum_flat_bottom_plate/999.json +70 -0
  80. package/labware/definitions/3/schema3test_flex_96_tiprack_200ul/999.json +1037 -0
  81. package/labware/definitions/3/schema3test_flex_96_tiprack_adapter/999.json +70 -0
  82. package/labware/definitions/3/schema3test_flex_tiprack_lid/999.json +146 -0
  83. package/labware/definitions/3/schema3test_tough_pcr_auto_sealing_lid/999.json +162 -0
  84. package/labware/definitions/3/schema3test_universal_flat_adapter/999.json +157 -0
  85. package/labware/fixtures/2/fixture_user_volumes_prototype.json +1137 -0
  86. package/labware/fixtures/2/index.ts +4 -4
  87. package/labware/fixtures/3/fixture_2_plate.json +28 -11
  88. package/labware/fixtures/3/fixture_corning_24_plate.json +51 -34
  89. package/labware/fixtures/3/index.ts +4 -0
  90. package/labware/schemas/2.json +36 -1
  91. package/labware/schemas/3.json +115 -25
  92. package/lib/command/index.d.ts +4211 -2095
  93. package/lib/command/schemas/12.json +65 -0
  94. package/lib/command/schemas/13.json +7039 -0
  95. package/lib/command/schemas/14.json +7254 -0
  96. package/lib/command/types/annotation.d.ts +1 -1
  97. package/lib/command/types/calibration.d.ts +5 -5
  98. package/lib/command/types/gantry.d.ts +5 -4
  99. package/lib/command/types/incidental.d.ts +1 -1
  100. package/lib/command/types/index.d.ts +60 -14
  101. package/lib/command/types/module.d.ts +75 -13
  102. package/lib/command/types/pipetting.d.ts +8 -3
  103. package/lib/command/types/robot.d.ts +71 -0
  104. package/lib/command/types/setup.d.ts +5 -5
  105. package/lib/command/types/support.d.ts +3 -2
  106. package/lib/command/types/timing.d.ts +1 -1
  107. package/lib/command/types/unsafe.d.ts +44 -3
  108. package/lib/deck/definitions/5/ot2_short_trash.json +37 -0
  109. package/lib/deck/definitions/5/ot2_standard.json +37 -0
  110. package/lib/deck/definitions/5/ot3_standard.json +152 -51
  111. package/lib/deck/index.d.ts +3 -3
  112. package/lib/deck/schemas/5.json +46 -1
  113. package/lib/errors/definitions/1/errors.json +12 -0
  114. package/lib/errors/index.d.ts +1 -1
  115. package/lib/index.mjs +380872 -297265
  116. package/lib/js/constants.d.ts +45 -17
  117. package/lib/js/deck/index.d.ts +2 -2
  118. package/lib/js/fixtures.d.ts +78 -3
  119. package/lib/js/getLabware.d.ts +3 -3
  120. package/lib/js/gripper.d.ts +1 -1
  121. package/lib/js/helpers/__tests__/getMaxPushOutVolume.test.d.ts +1 -0
  122. package/lib/js/helpers/__tests__/getMmFromBottom.test.d.ts +1 -0
  123. package/lib/js/helpers/__tests__/getStackedItemsOnStartingDeck.test.d.ts +1 -0
  124. package/lib/js/helpers/__tests__/labwareSchemaShims.test.d.ts +1 -0
  125. package/lib/js/helpers/__tests__/liquidClasses.test.d.ts +1 -0
  126. package/lib/js/helpers/__tests__/pairsFromArray.test.d.ts +1 -0
  127. package/lib/js/helpers/__tests__/vectorMath.test.d.ts +1 -0
  128. package/lib/js/helpers/getFixedTrashLabwareDefinition.d.ts +2 -2
  129. package/lib/js/helpers/getLabwareDefURI.d.ts +3 -0
  130. package/lib/js/helpers/getLabwareDefinitionsByURIForProtocol.d.ts +6 -0
  131. package/lib/js/helpers/getLabwareInfoByLiquidId.d.ts +10 -0
  132. package/lib/js/helpers/getLiquidsByIdForLabware.d.ts +2 -0
  133. package/lib/js/helpers/getLoadedLabwareDefinitionsByUri.d.ts +2 -2
  134. package/lib/js/helpers/getMaxPushOutVolume.d.ts +2 -0
  135. package/lib/js/helpers/getMmFromBottom.d.ts +2 -0
  136. package/lib/js/helpers/getSimplestFlexDeckConfig.d.ts +1 -1
  137. package/lib/js/helpers/getStackedItemsOnStartingDeck.d.ts +50 -0
  138. package/lib/js/helpers/getStandardDeckViewLayerBlockList.d.ts +2 -0
  139. package/lib/js/helpers/getTipTypeFromTipRackDefinition.d.ts +2 -2
  140. package/lib/js/helpers/getWellFillFromLabwareId.d.ts +4 -0
  141. package/lib/js/helpers/getWellNamePerMultiTip.d.ts +3 -3
  142. package/lib/js/helpers/getWellRangeForLiquidLabwarePair.d.ts +6 -0
  143. package/lib/js/helpers/getWellTotalVolume.d.ts +2 -2
  144. package/lib/js/helpers/index.d.ts +25 -14
  145. package/lib/js/helpers/labwareInference.d.ts +3 -3
  146. package/lib/js/helpers/liquidClasses.d.ts +10 -0
  147. package/lib/js/helpers/matrixMath.d.ts +3 -0
  148. package/lib/js/helpers/pairsFromArray.d.ts +8 -0
  149. package/lib/js/helpers/parseAddressableArea.d.ts +1 -1
  150. package/lib/js/helpers/parseProtocolCommands.d.ts +5 -5
  151. package/lib/js/helpers/positionMath.d.ts +127 -0
  152. package/lib/js/helpers/validateCustomLabwareHelper.d.ts +2 -2
  153. package/lib/js/helpers/vectorMath.d.ts +14 -0
  154. package/lib/js/helpers/wellSets.d.ts +4 -4
  155. package/lib/js/labware.d.ts +10 -9
  156. package/lib/js/labwareTools/index.d.ts +1 -1
  157. package/lib/js/liquidClasses.d.ts +4 -0
  158. package/lib/js/modules.d.ts +2 -2
  159. package/lib/js/pipettes.d.ts +3 -2
  160. package/lib/js/types.d.ts +105 -38
  161. package/lib/labware/definitions/2/agilent_1_reservoir_290ml/3.json +80 -0
  162. package/lib/labware/definitions/2/appliedbiosystemsmicroamp_384_wellplate_40ul/3.json +4737 -0
  163. package/lib/labware/definitions/2/axygen_96_wellplate_500ul/1.json +1036 -0
  164. package/lib/labware/definitions/2/axygen_96_wellplate_500ul/2.json +1159 -0
  165. package/lib/labware/definitions/2/biorad_384_wellplate_50ul/4.json +4748 -0
  166. package/lib/labware/definitions/2/biorad_96_wellplate_200ul_pcr/4.json +1187 -0
  167. package/lib/labware/definitions/2/corning_12_wellplate_6.9ml_flat/4.json +210 -0
  168. package/lib/labware/definitions/2/corning_24_wellplate_3.4ml_flat/4.json +342 -0
  169. package/lib/labware/definitions/2/corning_384_wellplate_112ul_flat/4.json +5116 -0
  170. package/lib/labware/definitions/2/corning_48_wellplate_1.6ml_flat/4.json +605 -0
  171. package/lib/labware/definitions/2/corning_48_wellplate_1.6ml_flat/5.json +610 -0
  172. package/lib/labware/definitions/2/corning_6_wellplate_16.8ml_flat/4.json +134 -0
  173. package/lib/labware/definitions/2/corning_96_wellplate_360ul_flat/4.json +1177 -0
  174. package/lib/labware/definitions/2/corning_96_wellplate_360ul_lid/1.json +111 -0
  175. package/lib/labware/definitions/2/ev_resin_tips_flex_96_labware/1.json +1 -1
  176. package/lib/labware/definitions/2/ibidi_96_square_well_plate_300ul/1.json +1105 -0
  177. package/lib/labware/definitions/2/ibidi_96_square_well_plate_300ul/2.json +1216 -0
  178. package/lib/labware/definitions/2/ibidi_96_square_well_plate_300ul_lid/1.json +110 -0
  179. package/lib/labware/definitions/2/nest_12_reservoir_22ml/1.json +232 -0
  180. package/lib/labware/definitions/2/nest_1_reservoir_290ml/3.json +80 -0
  181. package/lib/labware/definitions/2/nest_24_wellplate_10.4ml/1.json +386 -0
  182. package/lib/labware/definitions/2/nest_8_reservoir_22ml/1.json +162 -0
  183. package/lib/labware/definitions/2/nest_96_wellplate_100ul_pcr_full_skirt/4.json +1166 -0
  184. package/lib/labware/definitions/2/nest_96_wellplate_200ul_flat/4.json +1145 -0
  185. package/lib/labware/definitions/2/nest_96_wellplate_2ml_deep/4.json +1261 -0
  186. package/lib/labware/definitions/2/opentrons_24_aluminumblock_nest_0.5ml_screwcap/3.json +370 -0
  187. package/lib/labware/definitions/2/opentrons_24_tuberack_nest_0.5ml_screwcap/3.json +371 -0
  188. package/lib/labware/definitions/2/opentrons_96_aluminumblock_generic_pcr_strip_200ul/4.json +1149 -0
  189. package/lib/labware/definitions/2/opentrons_96_wellplate_200ul_pcr_full_skirt/4.json +1174 -0
  190. package/lib/labware/definitions/2/opentrons_flex_96_filtertiprack_1000ul/1.json +5 -0
  191. package/lib/labware/definitions/2/opentrons_flex_96_filtertiprack_200ul/1.json +5 -0
  192. package/lib/labware/definitions/2/opentrons_flex_96_filtertiprack_20ul/1.json +5 -0
  193. package/lib/labware/definitions/2/opentrons_flex_96_filtertiprack_50ul/1.json +5 -0
  194. package/lib/labware/definitions/2/opentrons_flex_96_tiprack_1000ul/1.json +5 -0
  195. package/lib/labware/definitions/2/opentrons_flex_96_tiprack_200ul/1.json +5 -0
  196. package/lib/labware/definitions/2/opentrons_flex_96_tiprack_20ul/1.json +5 -0
  197. package/lib/labware/definitions/2/opentrons_flex_96_tiprack_50ul/1.json +5 -0
  198. package/lib/labware/definitions/2/opentrons_flex_tiprack_lid/1.json +15 -9
  199. package/lib/labware/definitions/2/opentrons_tough_pcr_auto_sealing_lid/1.json +8 -0
  200. package/lib/labware/definitions/2/opentrons_tough_universal_lid/1.json +16 -1
  201. package/lib/labware/definitions/2/smc_384_read_plate/1.json +4701 -0
  202. package/lib/labware/definitions/2/smc_384_read_plate/2.json +5100 -0
  203. package/lib/labware/definitions/2/thermoscientificnunc_96_wellplate_1300ul/3.json +1141 -0
  204. package/lib/labware/definitions/2/thermoscientificnunc_96_wellplate_2000ul/3.json +1141 -0
  205. package/lib/labware/definitions/2/usascientific_12_reservoir_22ml/3.json +237 -0
  206. package/lib/labware/definitions/2/usascientific_96_wellplate_2.4ml_deep/3.json +1243 -0
  207. package/lib/labware/definitions/3/schema3test_96_well_aluminum_block/999.json +1050 -0
  208. package/lib/labware/definitions/3/schema3test_96_wellplate_200ul_pcr_full_skirt/999.json +1202 -0
  209. package/lib/labware/definitions/3/schema3test_aluminum_flat_bottom_plate/999.json +70 -0
  210. package/lib/labware/definitions/3/schema3test_flex_96_tiprack_200ul/999.json +1037 -0
  211. package/lib/labware/definitions/3/schema3test_flex_96_tiprack_adapter/999.json +70 -0
  212. package/lib/labware/definitions/3/schema3test_flex_tiprack_lid/999.json +146 -0
  213. package/lib/labware/definitions/3/schema3test_tough_pcr_auto_sealing_lid/999.json +162 -0
  214. package/lib/labware/definitions/3/schema3test_universal_flat_adapter/999.json +157 -0
  215. package/lib/labware/fixtures/2/fixture_user_volumes_prototype.json +1137 -0
  216. package/lib/labware/fixtures/2/index.d.ts +4 -4
  217. package/lib/labware/fixtures/3/fixture_2_plate.json +28 -11
  218. package/lib/labware/fixtures/3/fixture_corning_24_plate.json +51 -34
  219. package/lib/labware/fixtures/3/index.d.ts +3 -0
  220. package/lib/labware/schemas/2.json +36 -1
  221. package/lib/labware/schemas/3.json +115 -25
  222. package/lib/liquid-class/definitions/1/{ethanol_80.json → ethanol_80/1.json} +1957 -1406
  223. package/lib/liquid-class/definitions/1/{glycerol_50.json → glycerol_50/1.json} +1781 -1230
  224. package/lib/liquid-class/definitions/1/{water.json → water/1.json} +1567 -1082
  225. package/lib/liquid-class/fixtures/1/fixture_glycerol50.json +67 -48
  226. package/lib/liquid-class/schemas/1.json +40 -48
  227. package/lib/module/definitions/3/absorbanceReaderV1.json +20 -150
  228. package/lib/module/definitions/3/flexStackerModuleV1.json +31 -385
  229. package/lib/module/definitions/3/heaterShakerModuleV1.json +16 -357
  230. package/lib/module/definitions/3/magneticBlockV1.json +18 -148
  231. package/lib/module/definitions/3/magneticModuleV1.json +16 -398
  232. package/lib/module/definitions/3/magneticModuleV2.json +16 -398
  233. package/lib/module/definitions/3/temperatureModuleV1.json +16 -152
  234. package/lib/module/definitions/3/temperatureModuleV2.json +16 -152
  235. package/lib/module/definitions/3/thermocyclerModuleV1.json +16 -1339
  236. package/lib/module/definitions/3/thermocyclerModuleV2.json +18 -3616
  237. package/lib/module/schemas/3.json +111 -10
  238. package/lib/pipette/definitions/1/pipetteModelSpecs.json +336 -0
  239. package/lib/pipette/definitions/2/general/ninety_six_channel/p200/3_2.json +660 -0
  240. package/lib/pipette/definitions/2/geometry/eight_channel/p50/3_5.json +4 -0
  241. package/lib/pipette/definitions/2/geometry/ninety_six_channel/p200/3_0.json +4 -0
  242. package/lib/pipette/definitions/2/geometry/ninety_six_channel/p200/3_2.json +309 -0
  243. package/lib/pipette/definitions/2/geometry/single_channel/p50/3_6.json +4 -0
  244. package/lib/pipette/definitions/2/liquid/ninety_six_channel/p200/default/1_0.json +11 -11
  245. package/lib/pipette/definitions/2/liquid/ninety_six_channel/p200/default/3_0.json +12 -12
  246. package/lib/pipette/definitions/2/liquid/ninety_six_channel/p200/default/3_1.json +28 -18
  247. package/lib/pipette/definitions/2/liquid/ninety_six_channel/p200/default/3_2.json +192 -0
  248. package/lib/pipette/definitions/2/liquid/single_channel/p50/default/3_6.json +5 -5
  249. package/lib/pipette/definitions/2/liquid/single_channel/p50/lowVolumeDefault/3_6.json +5 -5
  250. package/lib/pipette/fixtures/name/index.d.ts +1 -1
  251. package/lib/protocol/fixtures/index.d.ts +2 -2
  252. package/lib/protocol/index.d.ts +7 -7
  253. package/lib/protocol/types/schemaV4.d.ts +1 -1
  254. package/lib/protocol/types/schemaV5.d.ts +1 -1
  255. package/lib/protocol/types/schemaV5Addendum.d.ts +1 -1
  256. package/lib/protocol/types/schemaV6/command/gantry.d.ts +4 -4
  257. package/lib/protocol/types/schemaV6/command/index.d.ts +5 -5
  258. package/lib/protocol/types/schemaV6/command/module.d.ts +1 -1
  259. package/lib/protocol/types/schemaV6/command/pipetting.d.ts +1 -1
  260. package/lib/protocol/types/schemaV6/command/setup.d.ts +1 -1
  261. package/lib/protocol/types/schemaV6/command/timing.d.ts +1 -1
  262. package/lib/protocol/types/schemaV6/index.d.ts +2 -2
  263. package/lib/protocol/types/schemaV7/command/annotation.d.ts +1 -1
  264. package/lib/protocol/types/schemaV7/command/calibration.d.ts +5 -5
  265. package/lib/protocol/types/schemaV7/command/gantry.d.ts +4 -4
  266. package/lib/protocol/types/schemaV7/command/incidental.d.ts +1 -1
  267. package/lib/protocol/types/schemaV7/command/index.d.ts +7 -7
  268. package/lib/protocol/types/schemaV7/command/module.d.ts +1 -1
  269. package/lib/protocol/types/schemaV7/command/pipetting.d.ts +1 -1
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  271. package/lib/protocol/types/schemaV7/command/timing.d.ts +1 -1
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  273. package/lib/protocol/types/schemaV8/index.d.ts +18 -2
  274. package/liquid-class/definitions/1/{ethanol_80.json → ethanol_80/1.json} +1957 -1406
  275. package/liquid-class/definitions/1/{glycerol_50.json → glycerol_50/1.json} +1781 -1230
  276. package/liquid-class/definitions/1/{water.json → water/1.json} +1567 -1082
  277. package/liquid-class/fixtures/1/fixture_glycerol50.json +67 -48
  278. package/liquid-class/schemas/1.json +40 -48
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