@morscherlab/mint-sdk 1.0.0-rc.2 → 1.0.0-rc.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/__tests__/components/AppTopBar.navigation.test.d.ts +1 -0
- package/dist/__tests__/components/DoseCalculatorVolumeField.test.d.ts +1 -0
- package/dist/__tests__/components/PlateMapEditorToolbarInternal.test.d.ts +1 -0
- package/dist/__tests__/components/PluginWorkspaceView.controls.test.d.ts +1 -0
- package/dist/__tests__/components/PluginWorkspaceView.navigation.test.d.ts +1 -0
- package/dist/__tests__/components/PluginWorkspaceView.shell.test.d.ts +1 -0
- package/dist/__tests__/components/ProtocolStep.presentation.test.d.ts +1 -0
- package/dist/__tests__/components/ProtocolStepEditor.state.test.d.ts +1 -0
- package/dist/__tests__/components/ProtocolStepParameterField.test.d.ts +1 -0
- package/dist/__tests__/components/ReagentList.presentation.test.d.ts +1 -0
- package/dist/__tests__/components/SampleSelector.colors.test.d.ts +1 -0
- package/dist/__tests__/components/SampleSelector.drag.test.d.ts +1 -0
- package/dist/__tests__/components/SampleSelector.groups.test.d.ts +1 -0
- package/dist/__tests__/components/SampleSelector.selection.test.d.ts +1 -0
- package/dist/__tests__/components/SampleSelectorSampleRow.test.d.ts +1 -0
- package/dist/__tests__/components/ScheduleCalendar.test.d.ts +1 -0
- package/dist/__tests__/components/SettingsModal.schema.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.colors.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.conditions.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.geometry.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.interaction.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.legend.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.rendering.test.d.ts +1 -0
- package/dist/__tests__/components/WellPlate.sampleDrop.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/classify.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/columns.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/compose.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/cooccurrence.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/fingerprint.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/integration.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/template.test.d.ts +1 -0
- package/dist/__tests__/composables/autoGroup/tokenize.test.d.ts +1 -0
- package/dist/__tests__/composables/useAutoGroupInputSources.test.d.ts +1 -0
- package/dist/__tests__/composables/useScheduleCalendarLayout.test.d.ts +1 -0
- package/dist/__tests__/docs/extractDocsComponents.test.d.ts +1 -0
- package/dist/__tests__/docs/extractDocsExports.test.d.ts +1 -0
- package/dist/__tests__/docs/extractDocsParsing.test.d.ts +1 -0
- package/dist/__tests__/docs/extractDocsTemplates.test.d.ts +1 -0
- package/dist/__tests__/docs/extractDocsTheme.test.d.ts +1 -0
- package/dist/components/AppTopBar.navigation.d.ts +11 -0
- package/dist/components/BaseButton.vue.d.ts +1 -1
- package/dist/components/BaseCheckbox.vue.d.ts +1 -1
- package/dist/components/BaseInput.vue.d.ts +2 -2
- package/dist/components/BasePill.vue.d.ts +1 -1
- package/dist/components/BaseRadioGroup.vue.d.ts +1 -1
- package/dist/components/BaseSelect.vue.d.ts +1 -1
- package/dist/components/BaseSlider.vue.d.ts +2 -2
- package/dist/components/BaseTextarea.vue.d.ts +2 -2
- package/dist/components/BaseToggle.vue.d.ts +1 -1
- package/dist/components/BioTemplateExperimentWorkspaceView.vue.d.ts +2 -2
- package/dist/components/BioTemplatePackWorkspaceView.vue.d.ts +1 -1
- package/dist/components/ColorSlider.vue.d.ts +2 -2
- package/dist/components/ConcentrationInput.vue.d.ts +2 -2
- package/dist/components/DatePicker.vue.d.ts +1 -1
- package/dist/components/DateTimePicker.vue.d.ts +2 -2
- package/dist/components/DoseCalculatorVolumeField.vue.d.ts +15 -0
- package/dist/components/DropdownButton.vue.d.ts +1 -1
- package/dist/components/FileUploader.vue.d.ts +2 -2
- package/dist/components/FormulaInput.vue.d.ts +2 -2
- package/dist/components/IconButton.vue.d.ts +1 -1
- package/dist/components/LoadingSpinner.vue.d.ts +1 -1
- package/dist/components/MoleculeInput.vue.d.ts +2 -2
- package/dist/components/MultiSelect.vue.d.ts +1 -1
- package/dist/components/NumberInput.vue.d.ts +1 -1
- package/dist/components/PlateMapEditor.vue.d.ts +6 -6
- package/dist/components/PluginWorkspaceView.controls.d.ts +28 -0
- package/dist/components/PluginWorkspaceView.navigation.d.ts +29 -0
- package/dist/components/PluginWorkspaceView.props.d.ts +151 -0
- package/dist/components/PluginWorkspaceView.shell.d.ts +19 -0
- package/dist/components/PluginWorkspaceView.vue.d.ts +46 -195
- package/dist/components/ProgressBar.vue.d.ts +1 -1
- package/dist/components/ProtocolStep.presentation.d.ts +4 -0
- package/dist/components/ProtocolStepEditor.state.d.ts +18 -0
- package/dist/components/ProtocolStepParameterField.vue.d.ts +12 -0
- package/dist/components/ReagentList.presentation.d.ts +16 -0
- package/dist/components/ResourceCard.vue.d.ts +1 -1
- package/dist/components/SampleSelector.colors.d.ts +13 -0
- package/dist/components/SampleSelector.drag.d.ts +24 -0
- package/dist/components/SampleSelector.groups.d.ts +15 -0
- package/dist/components/SampleSelector.selection.d.ts +26 -0
- package/dist/components/SampleSelector.vue.d.ts +4 -1
- package/dist/components/SampleSelectorSampleRow.vue.d.ts +21 -0
- package/dist/components/SegmentedControl.vue.d.ts +1 -1
- package/dist/components/SequenceInput.vue.d.ts +2 -2
- package/dist/components/SequenceProgressBar.vue.d.ts +1 -1
- package/dist/components/SettingsModal.schema.d.ts +9 -0
- package/dist/components/StatusIndicator.vue.d.ts +1 -1
- package/dist/components/TagsInput.vue.d.ts +2 -2
- package/dist/components/TimePicker.vue.d.ts +2 -2
- package/dist/components/TimeRangeInput.vue.d.ts +1 -1
- package/dist/components/UnitInput.vue.d.ts +2 -2
- package/dist/components/WellPlate.colors.d.ts +9 -0
- package/dist/components/WellPlate.conditions.d.ts +26 -0
- package/dist/components/WellPlate.geometry.d.ts +23 -0
- package/dist/components/WellPlate.interaction.d.ts +71 -0
- package/dist/components/WellPlate.legend.d.ts +2 -0
- package/dist/components/WellPlate.rendering.d.ts +24 -0
- package/dist/components/WellPlate.sampleDrop.d.ts +8 -0
- package/dist/components/WellPlate.vue.d.ts +1 -1
- package/dist/components/index.js +2 -2
- package/dist/components/internal/ActionItemInternal.vue.d.ts +1 -1
- package/dist/components/internal/PlateMapEditorToolbarInternal.vue.d.ts +28 -0
- package/dist/{components-BhK-dW99.js → components-DtHA2bgp.js} +3754 -2991
- package/dist/components-DtHA2bgp.js.map +1 -0
- package/dist/composables/autoGroup/classKey.d.ts +4 -0
- package/dist/composables/autoGroup/classify.d.ts +28 -0
- package/dist/composables/autoGroup/colors.d.ts +2 -0
- package/dist/composables/autoGroup/columns.d.ts +10 -0
- package/dist/composables/autoGroup/compose.d.ts +8 -0
- package/dist/composables/autoGroup/cooccurrence.d.ts +2 -0
- package/dist/composables/autoGroup/csv-shim.d.ts +2 -0
- package/dist/composables/autoGroup/fingerprint.d.ts +3 -0
- package/dist/composables/autoGroup/index.d.ts +16 -0
- package/dist/composables/autoGroup/replicatePreGroup.d.ts +38 -0
- package/dist/composables/autoGroup/template.d.ts +15 -0
- package/dist/composables/autoGroup/tokenize.d.ts +8 -0
- package/dist/composables/autoGroupConstants.d.ts +1 -0
- package/dist/composables/autoGroupGrouping.d.ts +3 -0
- package/dist/composables/controlComponentBindings.d.ts +7 -0
- package/dist/composables/controlSchemaAdapters.d.ts +20 -0
- package/dist/composables/controlSchemaDoseDesign.d.ts +11 -0
- package/dist/composables/controlSchemaFormFields.d.ts +3 -0
- package/dist/composables/controlSchemaLayout.d.ts +7 -0
- package/dist/composables/controlSchemaModel.d.ts +5 -0
- package/dist/composables/controlSchemaNormalize.d.ts +15 -0
- package/dist/composables/controlSchemaTypes.d.ts +305 -0
- package/dist/composables/controlSchemaUtils.d.ts +9 -0
- package/dist/composables/controlWorkspaceOptions.d.ts +2 -0
- package/dist/composables/formBuilderSchema.d.ts +18 -0
- package/dist/composables/index.js +3 -3
- package/dist/composables/pluginEndpointBuilder.d.ts +13 -0
- package/dist/composables/protocolTemplateCatalog.d.ts +26 -0
- package/dist/composables/useAutoGroup.d.ts +61 -74
- package/dist/composables/useAutoGroupInputSources.d.ts +32 -0
- package/dist/composables/useBioTemplateControls.d.ts +1 -1
- package/dist/composables/useBioTemplatePresetWorkspace.d.ts +1 -1
- package/dist/composables/useBioTemplateWorkspace.d.ts +1 -1
- package/dist/composables/useControlSchema.d.ts +8 -346
- package/dist/composables/useControlWorkspace.d.ts +5 -0
- package/dist/composables/useForm.d.ts +2 -33
- package/dist/composables/useFormBuilder.d.ts +2 -9
- package/dist/composables/useFormValidation.d.ts +34 -0
- package/dist/composables/usePluginClient.d.ts +1 -4
- package/dist/composables/useProtocolTemplates.d.ts +2 -24
- package/dist/composables/useScheduleCalendarLayout.d.ts +49 -0
- package/dist/{composables-Bg7CFuNz.js → composables-Dlg8jenH.js} +33 -31
- package/dist/composables-Dlg8jenH.js.map +1 -0
- package/dist/index.js +4 -4
- package/dist/install.js +2 -2
- package/dist/styles.css +547 -516
- package/dist/templates/adapters.d.ts +14 -47
- package/dist/templates/assayLookups.d.ts +3 -0
- package/dist/templates/assayMatrixAdapters.d.ts +6 -0
- package/dist/templates/assayMatrixBuilder.d.ts +2 -0
- package/dist/templates/assayNormalizers.d.ts +4 -0
- package/dist/templates/builderDefaults.d.ts +1 -0
- package/dist/templates/builderIdUtils.d.ts +4 -0
- package/dist/templates/builderPresetControls.d.ts +10 -0
- package/dist/templates/builderReadUtils.d.ts +8 -0
- package/dist/templates/builders.d.ts +26 -67
- package/dist/templates/calibrationCurveAdapters.d.ts +4 -0
- package/dist/templates/calibrationCurveBuilder.d.ts +2 -0
- package/dist/templates/calibrationNormalizers.d.ts +5 -0
- package/dist/templates/componentBindingCatalog.d.ts +25 -0
- package/dist/templates/componentBindingHelpers.d.ts +17 -0
- package/dist/templates/componentDoseResponseProps.d.ts +3 -0
- package/dist/templates/componentGenericProps.d.ts +8 -0
- package/dist/templates/componentPlateHelpers.d.ts +5 -0
- package/dist/templates/componentPlateMapProps.d.ts +3 -0
- package/dist/templates/componentPropsFactory.d.ts +3 -0
- package/dist/templates/componentQpcrPlateProps.d.ts +3 -0
- package/dist/templates/componentTargetResolvers.d.ts +5 -0
- package/dist/templates/componentTemplateProps.d.ts +3 -0
- package/dist/templates/controlSchemaClone.d.ts +4 -0
- package/dist/templates/controlSchemaConstants.d.ts +10 -0
- package/dist/templates/controlSchemaMerge.d.ts +3 -0
- package/dist/templates/controlSchemaTargets.d.ts +17 -0
- package/dist/templates/controlSchemaTypes.d.ts +4 -0
- package/dist/templates/controlSchemas.d.ts +4 -4
- package/dist/templates/defaultBioTemplateBuilder.d.ts +2 -0
- package/dist/templates/doseResponseAdapters.d.ts +4 -0
- package/dist/templates/doseResponseBuilder.d.ts +2 -0
- package/dist/templates/elisaAssayCollectionBuilder.d.ts +2 -0
- package/dist/templates/flowCytometryAssayCollectionBuilder.d.ts +2 -0
- package/dist/templates/flowCytometryPanelBuilder.d.ts +2 -0
- package/dist/templates/flowNormalizers.d.ts +8 -0
- package/dist/templates/flowPanelAdapters.d.ts +4 -0
- package/dist/templates/index.js +1 -1
- package/dist/templates/instrumentRunAdapterHelpers.d.ts +8 -0
- package/dist/templates/instrumentRunAdapters.d.ts +8 -0
- package/dist/templates/instrumentRunBuilder.d.ts +2 -0
- package/dist/templates/lcmsBatchCollectionBuilder.d.ts +2 -0
- package/dist/templates/plateGeometry.d.ts +4 -0
- package/dist/templates/plateMapAdapters.d.ts +3 -0
- package/dist/templates/plateMapBuilder.d.ts +2 -0
- package/dist/templates/presetControlSchemas.d.ts +534 -0
- package/dist/templates/protocolAdapters.d.ts +5 -0
- package/dist/templates/protocolNormalizers.d.ts +6 -0
- package/dist/templates/protocolStepsBuilder.d.ts +2 -0
- package/dist/templates/qpcrAdapters.d.ts +5 -0
- package/dist/templates/qpcrExpressionCollectionBuilder.d.ts +2 -0
- package/dist/templates/qpcrPlateBuilder.d.ts +2 -0
- package/dist/templates/reagentAdapters.d.ts +5 -0
- package/dist/templates/reagentListBuilder.d.ts +2 -0
- package/dist/templates/runNormalizers.d.ts +10 -0
- package/dist/templates/sampleNormalizers.d.ts +4 -0
- package/dist/templates/samplePrepAdapters.d.ts +4 -0
- package/dist/templates/samplePrepBuilder.d.ts +2 -0
- package/dist/templates/sampleSheetAdapters.d.ts +5 -0
- package/dist/templates/sampleSheetBuilder.d.ts +2 -0
- package/dist/templates/targetedMetabolomicsCollectionBuilder.d.ts +2 -0
- package/dist/templates/targetedMetabolomicsHelpers.d.ts +5 -0
- package/dist/templates/templateAdapterTypes.d.ts +48 -0
- package/dist/templates/templateControlSchemas.d.ts +400 -0
- package/dist/templates/templateCreateOptions.d.ts +165 -0
- package/dist/templates/templateEnvelopes.d.ts +9 -0
- package/dist/templates/templatePackCollectionBuilder.d.ts +2 -0
- package/dist/templates/templatePresetCollectionBuilder.d.ts +18 -0
- package/dist/templates/templateQpcrTypes.d.ts +42 -0
- package/dist/templates/templateValidators.d.ts +13 -0
- package/dist/templates/timeCourseAdapters.d.ts +5 -0
- package/dist/templates/timeCourseBuilder.d.ts +2 -0
- package/dist/templates/types.d.ts +5 -250
- package/dist/templates/wellPlateScreenCollectionBuilder.d.ts +2 -0
- package/dist/templates/westernBlotAssayCollectionBuilder.d.ts +2 -0
- package/dist/{templates-BorLR_7p.js → templates-DtdUvJ4c.js} +3565 -3411
- package/dist/templates-DtdUvJ4c.js.map +1 -0
- package/dist/types/auto-group.d.ts +79 -9
- package/dist/types/componentLabTypes.d.ts +161 -0
- package/dist/types/componentWorkflowTypes.d.ts +150 -0
- package/dist/types/components.d.ts +2 -311
- package/dist/{useProtocolTemplates-n6AJqSqv.js → useProtocolTemplates-Bm5vyH4_.js} +1220 -454
- package/dist/useProtocolTemplates-Bm5vyH4_.js.map +1 -0
- package/package.json +1 -1
- package/src/__tests__/components/AppTopBar.navigation.test.ts +70 -0
- package/src/__tests__/components/DoseCalculatorVolumeField.test.ts +53 -0
- package/src/__tests__/components/PlateMapEditorToolbarInternal.test.ts +54 -0
- package/src/__tests__/components/PluginWorkspaceView.controls.test.ts +156 -0
- package/src/__tests__/components/PluginWorkspaceView.navigation.test.ts +102 -0
- package/src/__tests__/components/PluginWorkspaceView.shell.test.ts +41 -0
- package/src/__tests__/components/ProtocolStep.presentation.test.ts +31 -0
- package/src/__tests__/components/ProtocolStepEditor.state.test.ts +165 -0
- package/src/__tests__/components/ProtocolStepParameterField.test.ts +44 -0
- package/src/__tests__/components/ReagentList.presentation.test.ts +68 -0
- package/src/__tests__/components/SampleSelector.colors.test.ts +49 -0
- package/src/__tests__/components/SampleSelector.drag.test.ts +100 -0
- package/src/__tests__/components/SampleSelector.groups.test.ts +81 -0
- package/src/__tests__/components/SampleSelector.selection.test.ts +70 -0
- package/src/__tests__/components/SampleSelector.test.ts +32 -0
- package/src/__tests__/components/SampleSelectorSampleRow.test.ts +37 -0
- package/src/__tests__/components/ScheduleCalendar.test.ts +44 -0
- package/src/__tests__/components/SettingsModal.schema.test.ts +97 -0
- package/src/__tests__/components/WellPlate.colors.test.ts +28 -0
- package/src/__tests__/components/WellPlate.conditions.test.ts +68 -0
- package/src/__tests__/components/WellPlate.geometry.test.ts +54 -0
- package/src/__tests__/components/WellPlate.interaction.test.ts +171 -0
- package/src/__tests__/components/WellPlate.legend.test.ts +13 -0
- package/src/__tests__/components/WellPlate.rendering.test.ts +122 -0
- package/src/__tests__/components/WellPlate.sampleDrop.test.ts +70 -0
- package/src/__tests__/composables/autoGroup/classify.test.ts +107 -0
- package/src/__tests__/composables/autoGroup/columns.test.ts +135 -0
- package/src/__tests__/composables/autoGroup/compose.test.ts +227 -0
- package/src/__tests__/composables/autoGroup/cooccurrence.test.ts +91 -0
- package/src/__tests__/composables/autoGroup/fingerprint.test.ts +50 -0
- package/src/__tests__/composables/autoGroup/integration.test.ts +79 -0
- package/src/__tests__/composables/autoGroup/template.test.ts +70 -0
- package/src/__tests__/composables/autoGroup/tokenize.test.ts +33 -0
- package/src/__tests__/composables/useAutoGroup.test.ts +129 -625
- package/src/__tests__/composables/useAutoGroupInputSources.test.ts +107 -0
- package/src/__tests__/composables/useControlSchema.test.ts +23 -0
- package/src/__tests__/composables/useScheduleCalendarLayout.test.ts +89 -0
- package/src/__tests__/docs/extractDocsComponents.test.ts +142 -0
- package/src/__tests__/docs/extractDocsExports.test.ts +77 -0
- package/src/__tests__/docs/extractDocsParsing.test.ts +69 -0
- package/src/__tests__/docs/extractDocsTemplates.test.ts +54 -0
- package/src/__tests__/docs/extractDocsTheme.test.ts +89 -0
- package/src/__tests__/docs/frontendDocsCatalog.test.ts +1 -1
- package/src/__tests__/fixtures/auto-group/mixed-lc-ms-batch.txt +187 -0
- package/src/components/AppSidebar.vue +2 -6
- package/src/components/AppTopBar.navigation.ts +62 -0
- package/src/components/AppTopBar.vue +17 -44
- package/src/components/AutoGroupModal.story.vue +50 -0
- package/src/components/AutoGroupModal.vue +441 -158
- package/src/components/ControlWorkspaceView.vue +2 -6
- package/src/components/DoseCalculator.vue +13 -73
- package/src/components/DoseCalculatorVolumeField.vue +61 -0
- package/src/components/ExperimentTimeline.vue +6 -31
- package/src/components/FormBuilder.vue +2 -7
- package/src/components/PlateMapEditor.vue +32 -106
- package/src/components/PluginWorkspaceView.controls.ts +182 -0
- package/src/components/PluginWorkspaceView.navigation.ts +106 -0
- package/src/components/PluginWorkspaceView.props.ts +174 -0
- package/src/components/PluginWorkspaceView.shell.ts +66 -0
- package/src/components/PluginWorkspaceView.vue +85 -404
- package/src/components/ProtocolStep.presentation.ts +31 -0
- package/src/components/ProtocolStepEditor.state.ts +104 -0
- package/src/components/ProtocolStepEditor.vue +48 -179
- package/src/components/ProtocolStepParameterField.vue +134 -0
- package/src/components/ReagentList.presentation.ts +105 -0
- package/src/components/ReagentList.vue +16 -79
- package/src/components/SampleSelector.colors.ts +43 -0
- package/src/components/SampleSelector.drag.ts +164 -0
- package/src/components/SampleSelector.groups.ts +109 -0
- package/src/components/SampleSelector.selection.ts +103 -0
- package/src/components/SampleSelector.vue +82 -349
- package/src/components/SampleSelectorSampleRow.vue +64 -0
- package/src/components/ScheduleCalendar.vue +44 -199
- package/src/components/SettingsModal.schema.ts +71 -0
- package/src/components/SettingsModal.vue +16 -46
- package/src/components/WellPlate.colors.ts +56 -0
- package/src/components/WellPlate.conditions.ts +100 -0
- package/src/components/WellPlate.geometry.ts +91 -0
- package/src/components/WellPlate.interaction.ts +272 -0
- package/src/components/WellPlate.legend.ts +8 -0
- package/src/components/WellPlate.rendering.ts +105 -0
- package/src/components/WellPlate.sampleDrop.ts +73 -0
- package/src/components/WellPlate.vue +102 -550
- package/src/components/internal/PlateMapEditorToolbarInternal.vue +128 -0
- package/src/composables/autoGroup/classKey.ts +5 -0
- package/src/composables/autoGroup/classify.ts +205 -0
- package/src/composables/autoGroup/colors.ts +6 -0
- package/src/composables/autoGroup/columns.ts +226 -0
- package/src/composables/autoGroup/compose.ts +156 -0
- package/src/composables/autoGroup/cooccurrence.ts +46 -0
- package/src/composables/autoGroup/csv-shim.ts +44 -0
- package/src/composables/autoGroup/fingerprint.ts +49 -0
- package/src/composables/autoGroup/index.ts +20 -0
- package/src/composables/autoGroup/replicatePreGroup.ts +90 -0
- package/src/composables/autoGroup/template.ts +126 -0
- package/src/composables/autoGroup/tokenize.ts +41 -0
- package/src/composables/autoGroup/vocab.json +67 -0
- package/src/composables/autoGroupConstants.ts +4 -0
- package/src/composables/autoGroupGrouping.ts +148 -0
- package/src/composables/controlComponentBindings.ts +80 -0
- package/src/composables/controlSchemaAdapters.ts +196 -0
- package/src/composables/controlSchemaDoseDesign.ts +215 -0
- package/src/composables/controlSchemaFormFields.ts +61 -0
- package/src/composables/controlSchemaLayout.ts +59 -0
- package/src/composables/controlSchemaModel.ts +163 -0
- package/src/composables/controlSchemaNormalize.ts +101 -0
- package/src/composables/controlSchemaTypes.ts +364 -0
- package/src/composables/controlSchemaUtils.ts +36 -0
- package/src/composables/controlWorkspaceOptions.ts +21 -0
- package/src/composables/formBuilderSchema.ts +153 -0
- package/src/composables/pluginEndpointBuilder.ts +203 -0
- package/src/composables/protocolTemplateCatalog.ts +325 -0
- package/src/composables/useAutoGroup.ts +395 -549
- package/src/composables/useAutoGroupInputSources.ts +147 -0
- package/src/composables/useBioTemplateControls.ts +1 -1
- package/src/composables/useBioTemplatePresetWorkspace.ts +1 -1
- package/src/composables/useBioTemplateWorkspace.ts +1 -1
- package/src/composables/useControlSchema.ts +64 -1312
- package/src/composables/useControlWorkspace.ts +201 -0
- package/src/composables/useForm.ts +5 -187
- package/src/composables/useFormBuilder.ts +11 -153
- package/src/composables/useFormValidation.ts +154 -0
- package/src/composables/usePluginClient.ts +10 -193
- package/src/composables/useProtocolTemplates.ts +10 -328
- package/src/composables/useScheduleCalendarLayout.ts +287 -0
- package/src/styles/components/auto-group-modal.css +248 -310
- package/src/templates/adapters.ts +89 -930
- package/src/templates/assayLookups.ts +33 -0
- package/src/templates/assayMatrixAdapters.ts +78 -0
- package/src/templates/assayMatrixBuilder.ts +59 -0
- package/src/templates/assayNormalizers.ts +34 -0
- package/src/templates/builderDefaults.ts +11 -0
- package/src/templates/builderIdUtils.ts +20 -0
- package/src/templates/builderPresetControls.ts +165 -0
- package/src/templates/builderReadUtils.ts +57 -0
- package/src/templates/builders.ts +122 -2350
- package/src/templates/calibrationCurveAdapters.ts +59 -0
- package/src/templates/calibrationCurveBuilder.ts +99 -0
- package/src/templates/calibrationNormalizers.ts +60 -0
- package/src/templates/componentBindingCatalog.ts +90 -0
- package/src/templates/componentBindingHelpers.ts +93 -0
- package/src/templates/componentBindings.ts +12 -461
- package/src/templates/componentDoseResponseProps.ts +42 -0
- package/src/templates/componentGenericProps.ts +77 -0
- package/src/templates/componentPlateHelpers.ts +29 -0
- package/src/templates/componentPlateMapProps.ts +32 -0
- package/src/templates/componentPropsFactory.ts +21 -0
- package/src/templates/componentQpcrPlateProps.ts +28 -0
- package/src/templates/componentTargetResolvers.ts +69 -0
- package/src/templates/componentTemplateProps.ts +78 -0
- package/src/templates/controlSchemaClone.ts +32 -0
- package/src/templates/controlSchemaConstants.ts +11 -0
- package/src/templates/controlSchemaMerge.ts +40 -0
- package/src/templates/controlSchemaTargets.ts +87 -0
- package/src/templates/controlSchemaTypes.ts +20 -0
- package/src/templates/controlSchemas.ts +22 -704
- package/src/templates/defaultBioTemplateBuilder.ts +124 -0
- package/src/templates/doseResponseAdapters.ts +45 -0
- package/src/templates/doseResponseBuilder.ts +44 -0
- package/src/templates/elisaAssayCollectionBuilder.ts +62 -0
- package/src/templates/flowCytometryAssayCollectionBuilder.ts +41 -0
- package/src/templates/flowCytometryPanelBuilder.ts +53 -0
- package/src/templates/flowNormalizers.ts +58 -0
- package/src/templates/flowPanelAdapters.ts +58 -0
- package/src/templates/instrumentRunAdapterHelpers.ts +94 -0
- package/src/templates/instrumentRunAdapters.ts +163 -0
- package/src/templates/instrumentRunBuilder.ts +97 -0
- package/src/templates/lcmsBatchCollectionBuilder.ts +38 -0
- package/src/templates/plateGeometry.ts +62 -0
- package/src/templates/plateMapAdapters.ts +36 -0
- package/src/templates/plateMapBuilder.ts +43 -0
- package/src/templates/presetControlSchemas.ts +258 -0
- package/src/templates/protocolAdapters.ts +69 -0
- package/src/templates/protocolNormalizers.ts +37 -0
- package/src/templates/protocolStepsBuilder.ts +36 -0
- package/src/templates/qpcrAdapters.ts +104 -0
- package/src/templates/qpcrExpressionCollectionBuilder.ts +33 -0
- package/src/templates/qpcrPlateBuilder.ts +96 -0
- package/src/templates/reagentAdapters.ts +77 -0
- package/src/templates/reagentListBuilder.ts +30 -0
- package/src/templates/runNormalizers.ts +63 -0
- package/src/templates/sampleNormalizers.ts +58 -0
- package/src/templates/samplePrepAdapters.ts +63 -0
- package/src/templates/samplePrepBuilder.ts +51 -0
- package/src/templates/sampleSheetAdapters.ts +75 -0
- package/src/templates/sampleSheetBuilder.ts +23 -0
- package/src/templates/targetedMetabolomicsCollectionBuilder.ts +79 -0
- package/src/templates/targetedMetabolomicsHelpers.ts +102 -0
- package/src/templates/templateAdapterTypes.ts +58 -0
- package/src/templates/templateControlSchemas.ts +320 -0
- package/src/templates/templateCreateOptions.ts +208 -0
- package/src/templates/templateEnvelopes.ts +137 -0
- package/src/templates/templatePackCollectionBuilder.ts +23 -0
- package/src/templates/templatePresetCollectionBuilder.ts +139 -0
- package/src/templates/templateQpcrTypes.ts +48 -0
- package/src/templates/templateValidators.ts +414 -0
- package/src/templates/timeCourseAdapters.ts +73 -0
- package/src/templates/timeCourseBuilder.ts +64 -0
- package/src/templates/types.ts +79 -275
- package/src/templates/wellPlateScreenCollectionBuilder.ts +36 -0
- package/src/templates/westernBlotAssayCollectionBuilder.ts +68 -0
- package/src/types/auto-group.ts +107 -9
- package/src/types/componentLabTypes.ts +235 -0
- package/src/types/componentWorkflowTypes.ts +190 -0
- package/src/types/components.ts +74 -424
- package/dist/components-BhK-dW99.js.map +0 -1
- package/dist/composables-Bg7CFuNz.js.map +0 -1
- package/dist/templates-BorLR_7p.js.map +0 -1
- package/dist/useProtocolTemplates-n6AJqSqv.js.map +0 -1
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import type {
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AutoGroupResult,
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ColumnInfo,
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MetadataRow,
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OutlierAction,
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ParsedCsvData,
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} from '../types/auto-group'
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import type { SampleGroup } from '../types/components'
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import { DEFAULT_COLORS } from './autoGroupConstants'
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export function computeGroups(
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allSamples: string[],
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columns: ColumnInfo[],
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enabledFields: Set<number>,
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outlierActions: Map<number, OutlierAction>,
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delimiter: string,
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minFieldCount: number,
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): AutoGroupResult {
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const excludedSamples: string[] = []
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const qcSamples: string[] = []
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const conformingSamples: string[] = []
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for (let i = 0; i < allSamples.length; i++) {
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const action = outlierActions.get(i)
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if (action === 'exclude') {
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excludedSamples.push(allSamples[i])
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} else if (action === 'qc') {
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qcSamples.push(allSamples[i])
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} else {
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conformingSamples.push(allSamples[i])
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}
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}
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// Build group map
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const groupMap = new Map<string, string[]>()
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const metadata: MetadataRow[] = []
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const enabledIndices = [...enabledFields].sort((a, b) => a - b)
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const suffixCount = minFieldCount - 1
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for (const sample of conformingSamples) {
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const parts = sample.split(delimiter)
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const splitAt = Math.max(1, parts.length - suffixCount)
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const row = [
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parts.slice(0, splitAt).join(delimiter),
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...parts.slice(splitAt),
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]
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// Build group key from enabled columns
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const keyParts: string[] = []
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for (const idx of enabledIndices) {
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if (idx < row.length && idx < columns.length) {
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keyParts.push(row[idx])
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}
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}
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const groupKey = keyParts.join(' / ')
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const group = groupMap.get(groupKey)
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if (group) {
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group.push(sample)
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} else {
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groupMap.set(groupKey, [sample])
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}
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// Build metadata row with ALL columns
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const fields: Record<string, string> = {}
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for (const col of columns) {
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if (col.index < row.length) {
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fields[col.name] = row[col.index]
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}
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}
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metadata.push({ sampleName: sample, fields, group: groupKey })
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}
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// Convert to SampleGroup[]
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const groups: SampleGroup[] = []
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let colorIdx = 0
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for (const [name, samples] of groupMap) {
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groups.push({
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name,
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color: DEFAULT_COLORS[colorIdx % DEFAULT_COLORS.length],
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samples,
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})
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colorIdx++
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}
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// QC group
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if (qcSamples.length > 0) {
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groups.push({
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name: 'QC',
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color: '#6B7280',
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samples: qcSamples,
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})
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for (const sample of qcSamples) {
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metadata.push({ sampleName: sample, fields: {}, group: 'QC' })
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}
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}
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return { groups, metadata, excludedSamples }
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}
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export function computeGroupsFromCsv(
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csvData: ParsedCsvData,
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columns: ColumnInfo[],
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enabledFields: Set<number>,
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): AutoGroupResult {
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const groupMap = new Map<string, string[]>()
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const metadata: MetadataRow[] = []
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const enabledCols = columns
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.filter(c => enabledFields.has(c.index))
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.sort((a, b) => a.index - b.index)
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for (const row of csvData.rows) {
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const sampleName = row[csvData.sampleColumn]
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// Build group key from enabled CSV column values
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// Use originalName for CSV row lookup (survives user renames), display name for group key
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const keyParts = enabledCols.map(col => row[col.originalName ?? col.name])
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const groupKey = keyParts.join(' / ')
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const group = groupMap.get(groupKey)
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if (group) {
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group.push(sampleName)
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} else {
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groupMap.set(groupKey, [sampleName])
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}
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// Build metadata row with ALL columns - use display name as key, original for lookup
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const fields: Record<string, string> = {}
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for (const col of columns) {
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fields[col.name] = row[col.originalName ?? col.name]
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}
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metadata.push({ sampleName, fields, group: groupKey })
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}
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// Convert to SampleGroup[]
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const groups: SampleGroup[] = []
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let colorIdx = 0
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for (const [name, samples] of groupMap) {
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groups.push({
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name,
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color: DEFAULT_COLORS[colorIdx % DEFAULT_COLORS.length],
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samples,
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})
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colorIdx++
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}
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return { groups, metadata, excludedSamples: [] }
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}
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@@ -0,0 +1,80 @@
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import type {
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ControlComponentBinding,
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ControlComponentBindingConfig,
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ControlComponentBindingRecordConfig,
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ControlComponentBindingsById,
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ControlComponentBindingsConfig,
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ControlComponentPropsMap,
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ControlComponentPropSource,
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} from './controlSchemaTypes'
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/** Map control workspace values into component props for direct `v-bind` usage. */
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export function controlValuesToComponentProps<TValues extends Record<string, unknown>>(
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values: TValues,
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mapping?: ControlComponentPropsMap<TValues>,
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): Record<string, unknown> {
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if (mapping === undefined) return { ...values }
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if (Array.isArray(mapping)) {
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const props: Record<string, unknown> = {}
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for (const key of mapping) {
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props[key] = values[key]
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}
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return props
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}
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const props: Record<string, unknown> = {}
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for (const [prop, source] of Object.entries(mapping) as Array<[string, ControlComponentPropSource<TValues>]>) {
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props[prop] = typeof source === 'function' ? source(values) : values[source]
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}
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return props
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}
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/** Map control workspace values into named SDK component bindings for direct slot rendering. */
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export function controlValuesToComponentBindings<TValues extends Record<string, unknown>>(
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values: TValues,
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bindings?: ControlComponentBindingsConfig<TValues>,
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): ControlComponentBinding[] {
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if (bindings === undefined) return []
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return normalizeControlComponentBindingConfigs(bindings).map(binding => ({
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id: binding.id,
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component: binding.component,
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props: controlValuesToComponentProps(values, binding.props),
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}))
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}
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/** Map control workspace values into SDK component bindings keyed by binding id. */
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export function controlValuesToComponentBindingsById<TValues extends Record<string, unknown>>(
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values: TValues,
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bindings?: ControlComponentBindingsConfig<TValues>,
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): ControlComponentBindingsById {
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return Object.fromEntries(
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controlValuesToComponentBindings(values, bindings).map(binding => [binding.id, binding]),
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)
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}
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function normalizeControlComponentBindingConfigs<TValues extends Record<string, unknown>>(
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bindings: ControlComponentBindingsConfig<TValues>,
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): Array<Required<Pick<ControlComponentBindingConfig<TValues>, 'id' | 'component'>> & Pick<ControlComponentBindingConfig<TValues>, 'props'>> {
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if (Array.isArray(bindings)) {
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const usedIds = new Map<string, number>()
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return bindings.map(binding => ({
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id: uniqueComponentBindingId(binding.id ?? binding.component, usedIds),
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component: binding.component,
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props: binding.props,
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}))
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}
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+
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69
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return Object.entries(bindings).map(([id, binding]: [string, ControlComponentBindingRecordConfig<TValues>]) => ({
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id,
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component: binding.component,
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props: binding.props,
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73
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}))
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}
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+
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76
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function uniqueComponentBindingId(id: string, usedIds: Map<string, number>): string {
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77
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const count = usedIds.get(id) ?? 0
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78
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+
usedIds.set(id, count + 1)
|
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79
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return count === 0 ? id : `${id}-${count + 1}`
|
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80
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}
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|
@@ -0,0 +1,196 @@
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|
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1
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import type {
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2
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PillNavItem,
|
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3
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SidebarToolSection,
|
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4
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+
SettingsModalSchema,
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5
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TopBarSettingsConfig,
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6
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} from '../types'
|
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7
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import type {
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8
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FormSectionSchema,
|
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9
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+
} from '../types/form-builder'
|
|
10
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+
import {
|
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11
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+
controlToFormField,
|
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12
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+
} from './controlSchemaFormFields'
|
|
13
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+
import {
|
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14
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+
controlViewItem,
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15
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+
firstSidebarConfig,
|
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16
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isSidebarEnabled,
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17
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sectionConfig,
|
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18
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} from './controlSchemaLayout'
|
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19
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+
import {
|
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20
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normalizeControls,
|
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21
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+
} from './controlSchemaNormalize'
|
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22
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+
import {
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|
23
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+
humanize,
|
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24
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+
orderedUnique,
|
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25
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} from './controlSchemaUtils'
|
|
26
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+
import type {
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27
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+
ControlFormSchema,
|
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28
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+
ControlSchema,
|
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29
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+
ControlSchemaOptions,
|
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30
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+
} from './controlSchemaTypes'
|
|
31
|
+
|
|
32
|
+
/** Convert a compact control schema into a FormBuilder schema. */
|
|
33
|
+
export function controlsToFormSchema(
|
|
34
|
+
controls: ControlSchema,
|
|
35
|
+
options: ControlSchemaOptions = {},
|
|
36
|
+
): ControlFormSchema {
|
|
37
|
+
const normalized = normalizeControls(controls, options)
|
|
38
|
+
const sectionIds = orderedUnique(normalized.map(control => control.sectionId))
|
|
39
|
+
const sections = sectionIds.map((sectionId): FormSectionSchema => {
|
|
40
|
+
const sectionControls = normalized.filter(control => control.sectionId === sectionId)
|
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41
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+
const config = sectionConfig(sectionId, sectionControls, options)
|
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+
return {
|
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43
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+
id: sectionId,
|
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44
|
+
title: config.title ?? config.label ?? humanize(sectionId),
|
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45
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+
description: config.description,
|
|
46
|
+
columns: config.columns ?? options.columns ?? 1,
|
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|
+
defaultOpen: config.defaultOpen,
|
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|
+
condition: config.condition,
|
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49
|
+
fields: sectionControls.map(controlToFormField),
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+
}
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+
})
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+
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return {
|
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sections,
|
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submitLabel: options.submitLabel,
|
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|
+
cancelLabel: options.cancelLabel,
|
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|
+
showCancel: options.showCancel,
|
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}
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}
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|
+
|
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61
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/** Convert controls into AppSidebar panels grouped by view and section. */
|
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62
|
+
export function controlsToSidebarPanels(
|
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63
|
+
controls: ControlSchema,
|
|
64
|
+
options: ControlSchemaOptions = {},
|
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65
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+
): Record<string, SidebarToolSection[]> {
|
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|
+
const normalized = normalizeControls(controls, options)
|
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|
+
.filter(control => isSidebarEnabled(control.definition.sidebar))
|
|
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|
+
const viewIds = orderedUnique(normalized.map(control => control.viewId))
|
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|
+
const panels: Record<string, SidebarToolSection[]> = {}
|
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70
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+
|
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+
for (const viewId of viewIds) {
|
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|
+
const viewControls = normalized.filter(control => control.viewId === viewId)
|
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|
+
const sectionIds = orderedUnique(viewControls.map(control => control.sectionId))
|
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+
panels[viewId] = sectionIds.map((sectionId): SidebarToolSection => {
|
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+
const sectionControls = viewControls.filter(control => control.sectionId === sectionId)
|
|
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|
+
const config = sectionConfig(sectionId, sectionControls, options)
|
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|
+
const sidebarConfig = firstSidebarConfig(sectionControls)
|
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|
+
return {
|
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79
|
+
id: sectionId,
|
|
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|
+
label: sidebarConfig?.label ?? config.label ?? config.title ?? humanize(sectionId),
|
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+
subtitle: sidebarConfig?.subtitle ?? config.subtitle,
|
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82
|
+
icon: sidebarConfig?.icon ?? config.icon,
|
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|
+
iconColor: sidebarConfig?.iconColor ?? config.iconColor,
|
|
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|
+
iconBg: sidebarConfig?.iconBg ?? config.iconBg,
|
|
85
|
+
defaultOpen: sidebarConfig?.defaultOpen ?? config.defaultOpen,
|
|
86
|
+
showToggle: sidebarConfig?.showToggle ?? config.showToggle,
|
|
87
|
+
}
|
|
88
|
+
})
|
|
89
|
+
}
|
|
90
|
+
|
|
91
|
+
return panels
|
|
92
|
+
}
|
|
93
|
+
|
|
94
|
+
/** Convert controls into a SettingsModal schema grouped by the same sections. */
|
|
95
|
+
export function controlsToSettingsSchema(
|
|
96
|
+
controls: ControlSchema,
|
|
97
|
+
options: ControlSchemaOptions = {},
|
|
98
|
+
): SettingsModalSchema {
|
|
99
|
+
const normalized = normalizeControls(controls, options)
|
|
100
|
+
const sectionIds = orderedUnique(normalized.map(control => control.sectionId))
|
|
101
|
+
|
|
102
|
+
return {
|
|
103
|
+
groups: sectionIds.map((sectionId) => {
|
|
104
|
+
const sectionControls = normalized.filter(control => control.sectionId === sectionId)
|
|
105
|
+
const config = sectionConfig(sectionId, sectionControls, options)
|
|
106
|
+
return {
|
|
107
|
+
id: sectionId,
|
|
108
|
+
label: config.label ?? config.title ?? humanize(sectionId),
|
|
109
|
+
description: config.description ?? config.subtitle,
|
|
110
|
+
icon: typeof config.icon === 'string' ? config.icon : undefined,
|
|
111
|
+
fields: sectionControls.map(controlToFormField),
|
|
112
|
+
columns: config.columns ?? options.columns ?? 1,
|
|
113
|
+
condition: config.condition,
|
|
114
|
+
access: config.access,
|
|
115
|
+
visibleFor: config.visibleFor,
|
|
116
|
+
requiresAdmin: config.requiresAdmin,
|
|
117
|
+
permissions: config.permissions,
|
|
118
|
+
anyPermissions: config.anyPermissions,
|
|
119
|
+
}
|
|
120
|
+
}),
|
|
121
|
+
}
|
|
122
|
+
}
|
|
123
|
+
|
|
124
|
+
/** Convert controls into an AppTopBar settingsConfig object that passes compact controls through to SettingsModal. */
|
|
125
|
+
export function controlsToTopBarSettingsConfig(
|
|
126
|
+
controls: ControlSchema,
|
|
127
|
+
options: ControlSchemaOptions = {},
|
|
128
|
+
config: Omit<TopBarSettingsConfig, 'schema' | 'controls' | 'controlOptions'> = {},
|
|
129
|
+
): TopBarSettingsConfig {
|
|
130
|
+
return {
|
|
131
|
+
...config,
|
|
132
|
+
controls,
|
|
133
|
+
controlOptions: options,
|
|
134
|
+
}
|
|
135
|
+
}
|
|
136
|
+
|
|
137
|
+
/** Return generated control view IDs that have at least one sidebar panel. */
|
|
138
|
+
export function controlsToViewIds(
|
|
139
|
+
controls: ControlSchema,
|
|
140
|
+
options: ControlSchemaOptions = {},
|
|
141
|
+
): string[] {
|
|
142
|
+
return controlsToViewItems(controls, options).map(item => item.id)
|
|
143
|
+
}
|
|
144
|
+
|
|
145
|
+
/** Return AppTopBar pillNav-compatible view items for switching generated control sidebars. */
|
|
146
|
+
export function controlsToViewItems(
|
|
147
|
+
controls: ControlSchema,
|
|
148
|
+
options: ControlSchemaOptions = {},
|
|
149
|
+
): PillNavItem[] {
|
|
150
|
+
return Object.entries(controlsToSidebarPanels(controls, options))
|
|
151
|
+
.filter(([, sections]) => sections.length > 0)
|
|
152
|
+
.map(([id]) => controlViewItem(id, options))
|
|
153
|
+
}
|
|
154
|
+
|
|
155
|
+
/** Return the first generated sidebar view ID, or an empty string when controls render no sidebar panels. */
|
|
156
|
+
export function getDefaultControlView(
|
|
157
|
+
controls: ControlSchema,
|
|
158
|
+
options: ControlSchemaOptions = {},
|
|
159
|
+
): string {
|
|
160
|
+
return controlsToViewIds(controls, options)[0] ?? ''
|
|
161
|
+
}
|
|
162
|
+
|
|
163
|
+
/** Return a headerless single-section FormBuilder schema for rendering inside an AppSidebar section slot. */
|
|
164
|
+
export function controlsToSectionFormSchema(
|
|
165
|
+
controls: ControlSchema,
|
|
166
|
+
sectionId: string,
|
|
167
|
+
options: ControlSchemaOptions = {},
|
|
168
|
+
): ControlFormSchema {
|
|
169
|
+
const schema = controlsToFormSchema(controls, options)
|
|
170
|
+
return {
|
|
171
|
+
sections: schema.sections
|
|
172
|
+
.filter(section => section.id === sectionId)
|
|
173
|
+
.map(section => ({ ...section, title: '', description: undefined })),
|
|
174
|
+
submitLabel: schema.submitLabel,
|
|
175
|
+
cancelLabel: schema.cancelLabel,
|
|
176
|
+
showCancel: schema.showCancel,
|
|
177
|
+
}
|
|
178
|
+
}
|
|
179
|
+
|
|
180
|
+
/** Return headerless FormBuilder schemas keyed by section ID for AppSidebar auto-rendering. */
|
|
181
|
+
export function controlsToSectionFormSchemas(
|
|
182
|
+
controls: ControlSchema,
|
|
183
|
+
options: ControlSchemaOptions = {},
|
|
184
|
+
): Record<string, ControlFormSchema> {
|
|
185
|
+
const schema = controlsToFormSchema(controls, options)
|
|
186
|
+
const schemas: Record<string, ControlFormSchema> = {}
|
|
187
|
+
for (const section of schema.sections) {
|
|
188
|
+
schemas[section.id] = {
|
|
189
|
+
sections: [{ ...section, title: '', description: undefined }],
|
|
190
|
+
submitLabel: schema.submitLabel,
|
|
191
|
+
cancelLabel: schema.cancelLabel,
|
|
192
|
+
showCancel: schema.showCancel,
|
|
193
|
+
}
|
|
194
|
+
}
|
|
195
|
+
return schemas
|
|
196
|
+
}
|
|
@@ -0,0 +1,215 @@
|
|
|
1
|
+
import type {
|
|
2
|
+
ControlComponentBindingsConfig,
|
|
3
|
+
ControlComponentPropSource,
|
|
4
|
+
ControlComponentPropsByIdMap,
|
|
5
|
+
ControlComponentPropsMap,
|
|
6
|
+
ControlModelBinding,
|
|
7
|
+
ControlSchema,
|
|
8
|
+
DoseCalculatorControlPropsOptions,
|
|
9
|
+
DoseDesignControlModelOptions,
|
|
10
|
+
WellPlateControlPropsOptions,
|
|
11
|
+
WellPlateDoseControlPropsOptions,
|
|
12
|
+
} from './controlSchemaTypes'
|
|
13
|
+
import type { WellConcentration } from './useDoseCalculator'
|
|
14
|
+
import {
|
|
15
|
+
defineControlModel,
|
|
16
|
+
} from './controlSchemaModel'
|
|
17
|
+
import {
|
|
18
|
+
recordValue,
|
|
19
|
+
} from './controlSchemaUtils'
|
|
20
|
+
|
|
21
|
+
/** Return a default WellPlate prop mapping for generated control workspaces. */
|
|
22
|
+
export function defineWellPlateControlProps<TValues extends Record<string, unknown> = Record<string, unknown>>(
|
|
23
|
+
options: WellPlateControlPropsOptions<TValues> = {},
|
|
24
|
+
): ControlComponentPropsMap<TValues> {
|
|
25
|
+
const selectedWells = options.selectedWells ?? sourceKey<TValues>('selectedWells')
|
|
26
|
+
const onUpdateModelValue = options.onUpdateModelValue === false
|
|
27
|
+
? undefined
|
|
28
|
+
: options.onUpdateModelValue ?? updateControlValueSource(selectedWells)
|
|
29
|
+
|
|
30
|
+
return compactComponentPropsMap<TValues>({
|
|
31
|
+
modelValue: selectedWells,
|
|
32
|
+
'onUpdate:modelValue': onUpdateModelValue,
|
|
33
|
+
format: options.format ?? sourceKey<TValues>('plateFormat'),
|
|
34
|
+
wells: options.wells ?? sourceKey<TValues>('wells'),
|
|
35
|
+
disabled: options.disabled ?? sourceKey<TValues>('disabled'),
|
|
36
|
+
readonly: options.readonly ?? sourceKey<TValues>('readonly'),
|
|
37
|
+
showLegend: options.showLegend,
|
|
38
|
+
showSampleTypeIndicator: options.showSampleTypeIndicator,
|
|
39
|
+
})
|
|
40
|
+
}
|
|
41
|
+
|
|
42
|
+
/** Return a default DoseCalculator prop mapping for generated control workspaces. */
|
|
43
|
+
export function defineDoseCalculatorControlProps<TValues extends Record<string, unknown> = Record<string, unknown>>(
|
|
44
|
+
options: DoseCalculatorControlPropsOptions<TValues> = {},
|
|
45
|
+
): ControlComponentPropsMap<TValues> {
|
|
46
|
+
const targetWells = options.targetWells ?? sourceKey<TValues>('selectedWells')
|
|
47
|
+
const wells = options.wells ?? sourceKey<TValues>('wells')
|
|
48
|
+
const onApplyToWells = options.onApplyToWells === false
|
|
49
|
+
? undefined
|
|
50
|
+
: options.onApplyToWells ?? defaultDoseApplyHandler(wells, targetWells)
|
|
51
|
+
|
|
52
|
+
return compactComponentPropsMap<TValues>({
|
|
53
|
+
mode: options.mode ?? sourceKey<TValues>('doseMode'),
|
|
54
|
+
targetWells,
|
|
55
|
+
disabled: options.disabled ?? sourceKey<TValues>('disabled'),
|
|
56
|
+
molecularWeight: options.molecularWeight,
|
|
57
|
+
onApplyToWells,
|
|
58
|
+
})
|
|
59
|
+
}
|
|
60
|
+
|
|
61
|
+
/** Return named WellPlate + DoseCalculator prop mappings for one dose-design control model. */
|
|
62
|
+
export function defineWellPlateDoseControlProps<TValues extends Record<string, unknown> = Record<string, unknown>>(
|
|
63
|
+
options: WellPlateDoseControlPropsOptions<TValues> = {},
|
|
64
|
+
): ControlComponentPropsByIdMap<TValues> {
|
|
65
|
+
return {
|
|
66
|
+
[options.plateId ?? 'plate']: defineWellPlateControlProps(options.plate),
|
|
67
|
+
[options.doseId ?? 'dose']: defineDoseCalculatorControlProps(options.dose),
|
|
68
|
+
}
|
|
69
|
+
}
|
|
70
|
+
|
|
71
|
+
/** Return named WellPlate + DoseCalculator component bindings for one dose-design control model. */
|
|
72
|
+
export function defineWellPlateDoseComponentBindings<TValues extends Record<string, unknown> = Record<string, unknown>>(
|
|
73
|
+
options: WellPlateDoseControlPropsOptions<TValues> = {},
|
|
74
|
+
): ControlComponentBindingsConfig<TValues> {
|
|
75
|
+
return [
|
|
76
|
+
{
|
|
77
|
+
id: options.plateId ?? 'plate',
|
|
78
|
+
component: 'WellPlate',
|
|
79
|
+
props: defineWellPlateControlProps(options.plate),
|
|
80
|
+
},
|
|
81
|
+
{
|
|
82
|
+
id: options.doseId ?? 'dose',
|
|
83
|
+
component: 'DoseCalculator',
|
|
84
|
+
props: defineDoseCalculatorControlProps(options.dose),
|
|
85
|
+
},
|
|
86
|
+
]
|
|
87
|
+
}
|
|
88
|
+
|
|
89
|
+
/** Return a complete ControlWorkspaceView model for WellPlate + DoseCalculator dose design. */
|
|
90
|
+
export function defineDoseDesignControlModel(
|
|
91
|
+
options: DoseDesignControlModelOptions = {},
|
|
92
|
+
): ControlModelBinding {
|
|
93
|
+
const viewId = options.viewId ?? 'design'
|
|
94
|
+
const sectionId = options.sectionId ?? 'dose'
|
|
95
|
+
const doseControls: ControlSchema = {
|
|
96
|
+
selectedWells: {
|
|
97
|
+
type: 'tags',
|
|
98
|
+
label: 'Selected wells',
|
|
99
|
+
default: [...(options.selectedWells ?? ['A1', 'A2'])],
|
|
100
|
+
},
|
|
101
|
+
plateFormat: {
|
|
102
|
+
label: 'Plate format',
|
|
103
|
+
default: options.plateFormat ?? 96,
|
|
104
|
+
options: options.plateFormats ?? [96, 384],
|
|
105
|
+
},
|
|
106
|
+
doseMode: {
|
|
107
|
+
label: 'Dose mode',
|
|
108
|
+
default: options.doseMode ?? 'serial',
|
|
109
|
+
options: options.doseModes ?? ['serial', 'dilution', 'conversion'],
|
|
110
|
+
},
|
|
111
|
+
disabled: {
|
|
112
|
+
label: 'Disable tools',
|
|
113
|
+
default: options.disabled ?? false,
|
|
114
|
+
},
|
|
115
|
+
}
|
|
116
|
+
|
|
117
|
+
if (options.includeMolecularWeight) {
|
|
118
|
+
doseControls.molecularWeight = {
|
|
119
|
+
type: 'number',
|
|
120
|
+
label: 'Molecular weight',
|
|
121
|
+
default: options.molecularWeight ?? 300,
|
|
122
|
+
min: 0,
|
|
123
|
+
}
|
|
124
|
+
}
|
|
125
|
+
|
|
126
|
+
const componentProps: WellPlateDoseControlPropsOptions = {
|
|
127
|
+
...options.componentProps,
|
|
128
|
+
dose: {
|
|
129
|
+
...(options.componentProps?.dose ?? {}),
|
|
130
|
+
...(options.includeMolecularWeight && options.componentProps?.dose?.molecularWeight === undefined
|
|
131
|
+
? { molecularWeight: 'molecularWeight' }
|
|
132
|
+
: {}),
|
|
133
|
+
},
|
|
134
|
+
}
|
|
135
|
+
|
|
136
|
+
return defineControlModel({
|
|
137
|
+
componentBindings: defineWellPlateDoseComponentBindings(componentProps),
|
|
138
|
+
componentPropsById: defineWellPlateDoseControlProps(componentProps),
|
|
139
|
+
views: {
|
|
140
|
+
[viewId]: {
|
|
141
|
+
label: options.viewLabel ?? 'Design',
|
|
142
|
+
sections: {
|
|
143
|
+
[sectionId]: {
|
|
144
|
+
label: options.sectionLabel ?? 'Dose design',
|
|
145
|
+
description: options.sectionDescription ?? 'Well selection and dose calculator controls',
|
|
146
|
+
controls: doseControls,
|
|
147
|
+
},
|
|
148
|
+
},
|
|
149
|
+
},
|
|
150
|
+
},
|
|
151
|
+
})
|
|
152
|
+
}
|
|
153
|
+
|
|
154
|
+
function compactComponentPropsMap<TValues extends Record<string, unknown>>(
|
|
155
|
+
mapping: Record<string, ControlComponentPropSource<TValues> | undefined>,
|
|
156
|
+
): ControlComponentPropsMap<TValues> {
|
|
157
|
+
return Object.fromEntries(
|
|
158
|
+
Object.entries(mapping).filter((entry): entry is [string, ControlComponentPropSource<TValues>] =>
|
|
159
|
+
entry[1] !== undefined
|
|
160
|
+
),
|
|
161
|
+
)
|
|
162
|
+
}
|
|
163
|
+
|
|
164
|
+
function sourceKey<TValues extends Record<string, unknown>>(key: string): keyof TValues & string {
|
|
165
|
+
return key as keyof TValues & string
|
|
166
|
+
}
|
|
167
|
+
|
|
168
|
+
function updateControlValueSource<TValues extends Record<string, unknown>>(
|
|
169
|
+
source: ControlComponentPropSource<TValues>,
|
|
170
|
+
): ((values: TValues) => (value: string[]) => void) | undefined {
|
|
171
|
+
if (typeof source !== 'string') return undefined
|
|
172
|
+
return values => (value: string[]) => {
|
|
173
|
+
const writableValues = values as Record<string, unknown>
|
|
174
|
+
writableValues[source] = value
|
|
175
|
+
}
|
|
176
|
+
}
|
|
177
|
+
|
|
178
|
+
function defaultDoseApplyHandler<TValues extends Record<string, unknown>>(
|
|
179
|
+
wells: ControlComponentPropSource<TValues>,
|
|
180
|
+
targetWells: ControlComponentPropSource<TValues>,
|
|
181
|
+
): ((values: TValues) => (results: WellConcentration[]) => void) | undefined {
|
|
182
|
+
if (wells === targetWells) return undefined
|
|
183
|
+
return updateWellsFromDoseResults(wells)
|
|
184
|
+
}
|
|
185
|
+
|
|
186
|
+
function updateWellsFromDoseResults<TValues extends Record<string, unknown>>(
|
|
187
|
+
source: ControlComponentPropSource<TValues>,
|
|
188
|
+
): ((values: TValues) => (results: WellConcentration[]) => void) | undefined {
|
|
189
|
+
if (typeof source !== 'string') return undefined
|
|
190
|
+
return values => (results: WellConcentration[]) => {
|
|
191
|
+
const writableValues = values as Record<string, unknown>
|
|
192
|
+
const currentWells = recordValue(writableValues[source])
|
|
193
|
+
const nextWells: Record<string, Record<string, unknown>> = {}
|
|
194
|
+
for (const [wellId, well] of Object.entries(currentWells)) {
|
|
195
|
+
nextWells[wellId] = recordValue(well)
|
|
196
|
+
}
|
|
197
|
+
|
|
198
|
+
for (const result of results) {
|
|
199
|
+
const existing = recordValue(nextWells[result.wellId])
|
|
200
|
+
const metadata = recordValue(existing.metadata)
|
|
201
|
+
nextWells[result.wellId] = {
|
|
202
|
+
...existing,
|
|
203
|
+
state: 'filled',
|
|
204
|
+
value: result.concentration.value,
|
|
205
|
+
metadata: {
|
|
206
|
+
...metadata,
|
|
207
|
+
concentration: result.concentration,
|
|
208
|
+
...(result.volume === undefined ? {} : { volume: result.volume }),
|
|
209
|
+
},
|
|
210
|
+
}
|
|
211
|
+
}
|
|
212
|
+
|
|
213
|
+
writableValues[source] = nextWells
|
|
214
|
+
}
|
|
215
|
+
}
|
|
@@ -0,0 +1,61 @@
|
|
|
1
|
+
import type {
|
|
2
|
+
FieldValidation,
|
|
3
|
+
FormFieldSchema,
|
|
4
|
+
} from '../types/form-builder'
|
|
5
|
+
import {
|
|
6
|
+
defaultValueForControl,
|
|
7
|
+
normalizeOption,
|
|
8
|
+
type NormalizedControl,
|
|
9
|
+
} from './controlSchemaNormalize'
|
|
10
|
+
import {
|
|
11
|
+
humanize,
|
|
12
|
+
numericValue,
|
|
13
|
+
} from './controlSchemaUtils'
|
|
14
|
+
import type {
|
|
15
|
+
ControlDefinition,
|
|
16
|
+
} from './controlSchemaTypes'
|
|
17
|
+
|
|
18
|
+
export function controlToFormField(control: NormalizedControl): FormFieldSchema {
|
|
19
|
+
const { name, definition, type } = control
|
|
20
|
+
const props = fieldProps(definition)
|
|
21
|
+
return {
|
|
22
|
+
name,
|
|
23
|
+
label: definition.label ?? humanize(name),
|
|
24
|
+
type,
|
|
25
|
+
defaultValue: defaultValueForControl(definition, type),
|
|
26
|
+
placeholder: definition.placeholder,
|
|
27
|
+
hint: definition.hint,
|
|
28
|
+
size: definition.size,
|
|
29
|
+
disabled: definition.disabled,
|
|
30
|
+
readonly: definition.readonly,
|
|
31
|
+
validation: validationForControl(definition),
|
|
32
|
+
condition: definition.condition,
|
|
33
|
+
access: definition.access,
|
|
34
|
+
visibleFor: definition.visibleFor,
|
|
35
|
+
requiresAdmin: definition.requiresAdmin,
|
|
36
|
+
permissions: definition.permissions,
|
|
37
|
+
anyPermissions: definition.anyPermissions,
|
|
38
|
+
colSpan: definition.colSpan,
|
|
39
|
+
props,
|
|
40
|
+
}
|
|
41
|
+
}
|
|
42
|
+
|
|
43
|
+
function fieldProps(definition: ControlDefinition): Record<string, unknown> {
|
|
44
|
+
const props: Record<string, unknown> = {}
|
|
45
|
+
if (definition.min !== undefined) props.min = numericValue(definition.min)
|
|
46
|
+
if (definition.max !== undefined) props.max = numericValue(definition.max)
|
|
47
|
+
if (definition.options) props.options = definition.options.map(normalizeOption)
|
|
48
|
+
return { ...props, ...(definition.props ?? {}) }
|
|
49
|
+
}
|
|
50
|
+
|
|
51
|
+
function validationForControl(definition: ControlDefinition): FieldValidation | undefined {
|
|
52
|
+
const validation: FieldValidation = { ...(definition.validation ?? {}) }
|
|
53
|
+
if (definition.required !== undefined) validation.required = definition.required
|
|
54
|
+
if (definition.min !== undefined) validation.min = definition.min
|
|
55
|
+
if (definition.max !== undefined) validation.max = definition.max
|
|
56
|
+
if (definition.minLength !== undefined) validation.minLength = definition.minLength
|
|
57
|
+
if (definition.maxLength !== undefined) validation.maxLength = definition.maxLength
|
|
58
|
+
if (definition.email !== undefined) validation.email = definition.email
|
|
59
|
+
if (definition.pattern !== undefined) validation.pattern = definition.pattern
|
|
60
|
+
return Object.keys(validation).length > 0 ? validation : undefined
|
|
61
|
+
}
|