@morscherlab/mint-sdk 1.0.0-rc.2 → 1.0.0-rc.5

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (443) hide show
  1. package/dist/__tests__/components/AppTopBar.navigation.test.d.ts +1 -0
  2. package/dist/__tests__/components/DoseCalculatorVolumeField.test.d.ts +1 -0
  3. package/dist/__tests__/components/PlateMapEditorToolbarInternal.test.d.ts +1 -0
  4. package/dist/__tests__/components/PluginWorkspaceView.controls.test.d.ts +1 -0
  5. package/dist/__tests__/components/PluginWorkspaceView.navigation.test.d.ts +1 -0
  6. package/dist/__tests__/components/PluginWorkspaceView.shell.test.d.ts +1 -0
  7. package/dist/__tests__/components/ProtocolStep.presentation.test.d.ts +1 -0
  8. package/dist/__tests__/components/ProtocolStepEditor.state.test.d.ts +1 -0
  9. package/dist/__tests__/components/ProtocolStepParameterField.test.d.ts +1 -0
  10. package/dist/__tests__/components/ReagentList.presentation.test.d.ts +1 -0
  11. package/dist/__tests__/components/SampleSelector.colors.test.d.ts +1 -0
  12. package/dist/__tests__/components/SampleSelector.drag.test.d.ts +1 -0
  13. package/dist/__tests__/components/SampleSelector.groups.test.d.ts +1 -0
  14. package/dist/__tests__/components/SampleSelector.selection.test.d.ts +1 -0
  15. package/dist/__tests__/components/SampleSelectorSampleRow.test.d.ts +1 -0
  16. package/dist/__tests__/components/ScheduleCalendar.test.d.ts +1 -0
  17. package/dist/__tests__/components/SettingsModal.schema.test.d.ts +1 -0
  18. package/dist/__tests__/components/WellPlate.colors.test.d.ts +1 -0
  19. package/dist/__tests__/components/WellPlate.conditions.test.d.ts +1 -0
  20. package/dist/__tests__/components/WellPlate.geometry.test.d.ts +1 -0
  21. package/dist/__tests__/components/WellPlate.interaction.test.d.ts +1 -0
  22. package/dist/__tests__/components/WellPlate.legend.test.d.ts +1 -0
  23. package/dist/__tests__/components/WellPlate.rendering.test.d.ts +1 -0
  24. package/dist/__tests__/components/WellPlate.sampleDrop.test.d.ts +1 -0
  25. package/dist/__tests__/composables/autoGroup/classify.test.d.ts +1 -0
  26. package/dist/__tests__/composables/autoGroup/columns.test.d.ts +1 -0
  27. package/dist/__tests__/composables/autoGroup/compose.test.d.ts +1 -0
  28. package/dist/__tests__/composables/autoGroup/cooccurrence.test.d.ts +1 -0
  29. package/dist/__tests__/composables/autoGroup/fingerprint.test.d.ts +1 -0
  30. package/dist/__tests__/composables/autoGroup/integration.test.d.ts +1 -0
  31. package/dist/__tests__/composables/autoGroup/template.test.d.ts +1 -0
  32. package/dist/__tests__/composables/autoGroup/tokenize.test.d.ts +1 -0
  33. package/dist/__tests__/composables/useAutoGroupInputSources.test.d.ts +1 -0
  34. package/dist/__tests__/composables/useScheduleCalendarLayout.test.d.ts +1 -0
  35. package/dist/__tests__/docs/extractDocsComponents.test.d.ts +1 -0
  36. package/dist/__tests__/docs/extractDocsExports.test.d.ts +1 -0
  37. package/dist/__tests__/docs/extractDocsParsing.test.d.ts +1 -0
  38. package/dist/__tests__/docs/extractDocsTemplates.test.d.ts +1 -0
  39. package/dist/__tests__/docs/extractDocsTheme.test.d.ts +1 -0
  40. package/dist/components/AppTopBar.navigation.d.ts +11 -0
  41. package/dist/components/BaseButton.vue.d.ts +1 -1
  42. package/dist/components/BaseCheckbox.vue.d.ts +1 -1
  43. package/dist/components/BaseInput.vue.d.ts +2 -2
  44. package/dist/components/BasePill.vue.d.ts +1 -1
  45. package/dist/components/BaseRadioGroup.vue.d.ts +1 -1
  46. package/dist/components/BaseSelect.vue.d.ts +1 -1
  47. package/dist/components/BaseSlider.vue.d.ts +2 -2
  48. package/dist/components/BaseTextarea.vue.d.ts +2 -2
  49. package/dist/components/BaseToggle.vue.d.ts +1 -1
  50. package/dist/components/BioTemplateExperimentWorkspaceView.vue.d.ts +2 -2
  51. package/dist/components/BioTemplatePackWorkspaceView.vue.d.ts +1 -1
  52. package/dist/components/ColorSlider.vue.d.ts +2 -2
  53. package/dist/components/ConcentrationInput.vue.d.ts +2 -2
  54. package/dist/components/DatePicker.vue.d.ts +1 -1
  55. package/dist/components/DateTimePicker.vue.d.ts +2 -2
  56. package/dist/components/DoseCalculatorVolumeField.vue.d.ts +15 -0
  57. package/dist/components/DropdownButton.vue.d.ts +1 -1
  58. package/dist/components/FileUploader.vue.d.ts +2 -2
  59. package/dist/components/FormulaInput.vue.d.ts +2 -2
  60. package/dist/components/IconButton.vue.d.ts +1 -1
  61. package/dist/components/LoadingSpinner.vue.d.ts +1 -1
  62. package/dist/components/MoleculeInput.vue.d.ts +2 -2
  63. package/dist/components/MultiSelect.vue.d.ts +1 -1
  64. package/dist/components/NumberInput.vue.d.ts +1 -1
  65. package/dist/components/PlateMapEditor.vue.d.ts +6 -6
  66. package/dist/components/PluginWorkspaceView.controls.d.ts +28 -0
  67. package/dist/components/PluginWorkspaceView.navigation.d.ts +29 -0
  68. package/dist/components/PluginWorkspaceView.props.d.ts +151 -0
  69. package/dist/components/PluginWorkspaceView.shell.d.ts +19 -0
  70. package/dist/components/PluginWorkspaceView.vue.d.ts +46 -195
  71. package/dist/components/ProgressBar.vue.d.ts +1 -1
  72. package/dist/components/ProtocolStep.presentation.d.ts +4 -0
  73. package/dist/components/ProtocolStepEditor.state.d.ts +18 -0
  74. package/dist/components/ProtocolStepParameterField.vue.d.ts +12 -0
  75. package/dist/components/ReagentList.presentation.d.ts +16 -0
  76. package/dist/components/ResourceCard.vue.d.ts +1 -1
  77. package/dist/components/SampleSelector.colors.d.ts +13 -0
  78. package/dist/components/SampleSelector.drag.d.ts +24 -0
  79. package/dist/components/SampleSelector.groups.d.ts +15 -0
  80. package/dist/components/SampleSelector.selection.d.ts +26 -0
  81. package/dist/components/SampleSelector.vue.d.ts +4 -1
  82. package/dist/components/SampleSelectorSampleRow.vue.d.ts +21 -0
  83. package/dist/components/SegmentedControl.vue.d.ts +1 -1
  84. package/dist/components/SequenceInput.vue.d.ts +2 -2
  85. package/dist/components/SequenceProgressBar.vue.d.ts +1 -1
  86. package/dist/components/SettingsModal.schema.d.ts +9 -0
  87. package/dist/components/StatusIndicator.vue.d.ts +1 -1
  88. package/dist/components/TagsInput.vue.d.ts +2 -2
  89. package/dist/components/TimePicker.vue.d.ts +2 -2
  90. package/dist/components/TimeRangeInput.vue.d.ts +1 -1
  91. package/dist/components/UnitInput.vue.d.ts +2 -2
  92. package/dist/components/WellPlate.colors.d.ts +9 -0
  93. package/dist/components/WellPlate.conditions.d.ts +26 -0
  94. package/dist/components/WellPlate.geometry.d.ts +23 -0
  95. package/dist/components/WellPlate.interaction.d.ts +71 -0
  96. package/dist/components/WellPlate.legend.d.ts +2 -0
  97. package/dist/components/WellPlate.rendering.d.ts +24 -0
  98. package/dist/components/WellPlate.sampleDrop.d.ts +8 -0
  99. package/dist/components/WellPlate.vue.d.ts +1 -1
  100. package/dist/components/index.js +2 -2
  101. package/dist/components/internal/ActionItemInternal.vue.d.ts +1 -1
  102. package/dist/components/internal/PlateMapEditorToolbarInternal.vue.d.ts +28 -0
  103. package/dist/{components-BhK-dW99.js → components-DtHA2bgp.js} +3754 -2991
  104. package/dist/components-DtHA2bgp.js.map +1 -0
  105. package/dist/composables/autoGroup/classKey.d.ts +4 -0
  106. package/dist/composables/autoGroup/classify.d.ts +28 -0
  107. package/dist/composables/autoGroup/colors.d.ts +2 -0
  108. package/dist/composables/autoGroup/columns.d.ts +10 -0
  109. package/dist/composables/autoGroup/compose.d.ts +8 -0
  110. package/dist/composables/autoGroup/cooccurrence.d.ts +2 -0
  111. package/dist/composables/autoGroup/csv-shim.d.ts +2 -0
  112. package/dist/composables/autoGroup/fingerprint.d.ts +3 -0
  113. package/dist/composables/autoGroup/index.d.ts +16 -0
  114. package/dist/composables/autoGroup/replicatePreGroup.d.ts +38 -0
  115. package/dist/composables/autoGroup/template.d.ts +15 -0
  116. package/dist/composables/autoGroup/tokenize.d.ts +8 -0
  117. package/dist/composables/autoGroupConstants.d.ts +1 -0
  118. package/dist/composables/autoGroupGrouping.d.ts +3 -0
  119. package/dist/composables/controlComponentBindings.d.ts +7 -0
  120. package/dist/composables/controlSchemaAdapters.d.ts +20 -0
  121. package/dist/composables/controlSchemaDoseDesign.d.ts +11 -0
  122. package/dist/composables/controlSchemaFormFields.d.ts +3 -0
  123. package/dist/composables/controlSchemaLayout.d.ts +7 -0
  124. package/dist/composables/controlSchemaModel.d.ts +5 -0
  125. package/dist/composables/controlSchemaNormalize.d.ts +15 -0
  126. package/dist/composables/controlSchemaTypes.d.ts +305 -0
  127. package/dist/composables/controlSchemaUtils.d.ts +9 -0
  128. package/dist/composables/controlWorkspaceOptions.d.ts +2 -0
  129. package/dist/composables/formBuilderSchema.d.ts +18 -0
  130. package/dist/composables/index.js +3 -3
  131. package/dist/composables/pluginEndpointBuilder.d.ts +13 -0
  132. package/dist/composables/protocolTemplateCatalog.d.ts +26 -0
  133. package/dist/composables/useAutoGroup.d.ts +61 -74
  134. package/dist/composables/useAutoGroupInputSources.d.ts +32 -0
  135. package/dist/composables/useBioTemplateControls.d.ts +1 -1
  136. package/dist/composables/useBioTemplatePresetWorkspace.d.ts +1 -1
  137. package/dist/composables/useBioTemplateWorkspace.d.ts +1 -1
  138. package/dist/composables/useControlSchema.d.ts +8 -346
  139. package/dist/composables/useControlWorkspace.d.ts +5 -0
  140. package/dist/composables/useForm.d.ts +2 -33
  141. package/dist/composables/useFormBuilder.d.ts +2 -9
  142. package/dist/composables/useFormValidation.d.ts +34 -0
  143. package/dist/composables/usePluginClient.d.ts +1 -4
  144. package/dist/composables/useProtocolTemplates.d.ts +2 -24
  145. package/dist/composables/useScheduleCalendarLayout.d.ts +49 -0
  146. package/dist/{composables-Bg7CFuNz.js → composables-Dlg8jenH.js} +33 -31
  147. package/dist/composables-Dlg8jenH.js.map +1 -0
  148. package/dist/index.js +4 -4
  149. package/dist/install.js +2 -2
  150. package/dist/styles.css +547 -516
  151. package/dist/templates/adapters.d.ts +14 -47
  152. package/dist/templates/assayLookups.d.ts +3 -0
  153. package/dist/templates/assayMatrixAdapters.d.ts +6 -0
  154. package/dist/templates/assayMatrixBuilder.d.ts +2 -0
  155. package/dist/templates/assayNormalizers.d.ts +4 -0
  156. package/dist/templates/builderDefaults.d.ts +1 -0
  157. package/dist/templates/builderIdUtils.d.ts +4 -0
  158. package/dist/templates/builderPresetControls.d.ts +10 -0
  159. package/dist/templates/builderReadUtils.d.ts +8 -0
  160. package/dist/templates/builders.d.ts +26 -67
  161. package/dist/templates/calibrationCurveAdapters.d.ts +4 -0
  162. package/dist/templates/calibrationCurveBuilder.d.ts +2 -0
  163. package/dist/templates/calibrationNormalizers.d.ts +5 -0
  164. package/dist/templates/componentBindingCatalog.d.ts +25 -0
  165. package/dist/templates/componentBindingHelpers.d.ts +17 -0
  166. package/dist/templates/componentDoseResponseProps.d.ts +3 -0
  167. package/dist/templates/componentGenericProps.d.ts +8 -0
  168. package/dist/templates/componentPlateHelpers.d.ts +5 -0
  169. package/dist/templates/componentPlateMapProps.d.ts +3 -0
  170. package/dist/templates/componentPropsFactory.d.ts +3 -0
  171. package/dist/templates/componentQpcrPlateProps.d.ts +3 -0
  172. package/dist/templates/componentTargetResolvers.d.ts +5 -0
  173. package/dist/templates/componentTemplateProps.d.ts +3 -0
  174. package/dist/templates/controlSchemaClone.d.ts +4 -0
  175. package/dist/templates/controlSchemaConstants.d.ts +10 -0
  176. package/dist/templates/controlSchemaMerge.d.ts +3 -0
  177. package/dist/templates/controlSchemaTargets.d.ts +17 -0
  178. package/dist/templates/controlSchemaTypes.d.ts +4 -0
  179. package/dist/templates/controlSchemas.d.ts +4 -4
  180. package/dist/templates/defaultBioTemplateBuilder.d.ts +2 -0
  181. package/dist/templates/doseResponseAdapters.d.ts +4 -0
  182. package/dist/templates/doseResponseBuilder.d.ts +2 -0
  183. package/dist/templates/elisaAssayCollectionBuilder.d.ts +2 -0
  184. package/dist/templates/flowCytometryAssayCollectionBuilder.d.ts +2 -0
  185. package/dist/templates/flowCytometryPanelBuilder.d.ts +2 -0
  186. package/dist/templates/flowNormalizers.d.ts +8 -0
  187. package/dist/templates/flowPanelAdapters.d.ts +4 -0
  188. package/dist/templates/index.js +1 -1
  189. package/dist/templates/instrumentRunAdapterHelpers.d.ts +8 -0
  190. package/dist/templates/instrumentRunAdapters.d.ts +8 -0
  191. package/dist/templates/instrumentRunBuilder.d.ts +2 -0
  192. package/dist/templates/lcmsBatchCollectionBuilder.d.ts +2 -0
  193. package/dist/templates/plateGeometry.d.ts +4 -0
  194. package/dist/templates/plateMapAdapters.d.ts +3 -0
  195. package/dist/templates/plateMapBuilder.d.ts +2 -0
  196. package/dist/templates/presetControlSchemas.d.ts +534 -0
  197. package/dist/templates/protocolAdapters.d.ts +5 -0
  198. package/dist/templates/protocolNormalizers.d.ts +6 -0
  199. package/dist/templates/protocolStepsBuilder.d.ts +2 -0
  200. package/dist/templates/qpcrAdapters.d.ts +5 -0
  201. package/dist/templates/qpcrExpressionCollectionBuilder.d.ts +2 -0
  202. package/dist/templates/qpcrPlateBuilder.d.ts +2 -0
  203. package/dist/templates/reagentAdapters.d.ts +5 -0
  204. package/dist/templates/reagentListBuilder.d.ts +2 -0
  205. package/dist/templates/runNormalizers.d.ts +10 -0
  206. package/dist/templates/sampleNormalizers.d.ts +4 -0
  207. package/dist/templates/samplePrepAdapters.d.ts +4 -0
  208. package/dist/templates/samplePrepBuilder.d.ts +2 -0
  209. package/dist/templates/sampleSheetAdapters.d.ts +5 -0
  210. package/dist/templates/sampleSheetBuilder.d.ts +2 -0
  211. package/dist/templates/targetedMetabolomicsCollectionBuilder.d.ts +2 -0
  212. package/dist/templates/targetedMetabolomicsHelpers.d.ts +5 -0
  213. package/dist/templates/templateAdapterTypes.d.ts +48 -0
  214. package/dist/templates/templateControlSchemas.d.ts +400 -0
  215. package/dist/templates/templateCreateOptions.d.ts +165 -0
  216. package/dist/templates/templateEnvelopes.d.ts +9 -0
  217. package/dist/templates/templatePackCollectionBuilder.d.ts +2 -0
  218. package/dist/templates/templatePresetCollectionBuilder.d.ts +18 -0
  219. package/dist/templates/templateQpcrTypes.d.ts +42 -0
  220. package/dist/templates/templateValidators.d.ts +13 -0
  221. package/dist/templates/timeCourseAdapters.d.ts +5 -0
  222. package/dist/templates/timeCourseBuilder.d.ts +2 -0
  223. package/dist/templates/types.d.ts +5 -250
  224. package/dist/templates/wellPlateScreenCollectionBuilder.d.ts +2 -0
  225. package/dist/templates/westernBlotAssayCollectionBuilder.d.ts +2 -0
  226. package/dist/{templates-BorLR_7p.js → templates-DtdUvJ4c.js} +3565 -3411
  227. package/dist/templates-DtdUvJ4c.js.map +1 -0
  228. package/dist/types/auto-group.d.ts +79 -9
  229. package/dist/types/componentLabTypes.d.ts +161 -0
  230. package/dist/types/componentWorkflowTypes.d.ts +150 -0
  231. package/dist/types/components.d.ts +2 -311
  232. package/dist/{useProtocolTemplates-n6AJqSqv.js → useProtocolTemplates-Bm5vyH4_.js} +1220 -454
  233. package/dist/useProtocolTemplates-Bm5vyH4_.js.map +1 -0
  234. package/package.json +1 -1
  235. package/src/__tests__/components/AppTopBar.navigation.test.ts +70 -0
  236. package/src/__tests__/components/DoseCalculatorVolumeField.test.ts +53 -0
  237. package/src/__tests__/components/PlateMapEditorToolbarInternal.test.ts +54 -0
  238. package/src/__tests__/components/PluginWorkspaceView.controls.test.ts +156 -0
  239. package/src/__tests__/components/PluginWorkspaceView.navigation.test.ts +102 -0
  240. package/src/__tests__/components/PluginWorkspaceView.shell.test.ts +41 -0
  241. package/src/__tests__/components/ProtocolStep.presentation.test.ts +31 -0
  242. package/src/__tests__/components/ProtocolStepEditor.state.test.ts +165 -0
  243. package/src/__tests__/components/ProtocolStepParameterField.test.ts +44 -0
  244. package/src/__tests__/components/ReagentList.presentation.test.ts +68 -0
  245. package/src/__tests__/components/SampleSelector.colors.test.ts +49 -0
  246. package/src/__tests__/components/SampleSelector.drag.test.ts +100 -0
  247. package/src/__tests__/components/SampleSelector.groups.test.ts +81 -0
  248. package/src/__tests__/components/SampleSelector.selection.test.ts +70 -0
  249. package/src/__tests__/components/SampleSelector.test.ts +32 -0
  250. package/src/__tests__/components/SampleSelectorSampleRow.test.ts +37 -0
  251. package/src/__tests__/components/ScheduleCalendar.test.ts +44 -0
  252. package/src/__tests__/components/SettingsModal.schema.test.ts +97 -0
  253. package/src/__tests__/components/WellPlate.colors.test.ts +28 -0
  254. package/src/__tests__/components/WellPlate.conditions.test.ts +68 -0
  255. package/src/__tests__/components/WellPlate.geometry.test.ts +54 -0
  256. package/src/__tests__/components/WellPlate.interaction.test.ts +171 -0
  257. package/src/__tests__/components/WellPlate.legend.test.ts +13 -0
  258. package/src/__tests__/components/WellPlate.rendering.test.ts +122 -0
  259. package/src/__tests__/components/WellPlate.sampleDrop.test.ts +70 -0
  260. package/src/__tests__/composables/autoGroup/classify.test.ts +107 -0
  261. package/src/__tests__/composables/autoGroup/columns.test.ts +135 -0
  262. package/src/__tests__/composables/autoGroup/compose.test.ts +227 -0
  263. package/src/__tests__/composables/autoGroup/cooccurrence.test.ts +91 -0
  264. package/src/__tests__/composables/autoGroup/fingerprint.test.ts +50 -0
  265. package/src/__tests__/composables/autoGroup/integration.test.ts +79 -0
  266. package/src/__tests__/composables/autoGroup/template.test.ts +70 -0
  267. package/src/__tests__/composables/autoGroup/tokenize.test.ts +33 -0
  268. package/src/__tests__/composables/useAutoGroup.test.ts +129 -625
  269. package/src/__tests__/composables/useAutoGroupInputSources.test.ts +107 -0
  270. package/src/__tests__/composables/useControlSchema.test.ts +23 -0
  271. package/src/__tests__/composables/useScheduleCalendarLayout.test.ts +89 -0
  272. package/src/__tests__/docs/extractDocsComponents.test.ts +142 -0
  273. package/src/__tests__/docs/extractDocsExports.test.ts +77 -0
  274. package/src/__tests__/docs/extractDocsParsing.test.ts +69 -0
  275. package/src/__tests__/docs/extractDocsTemplates.test.ts +54 -0
  276. package/src/__tests__/docs/extractDocsTheme.test.ts +89 -0
  277. package/src/__tests__/docs/frontendDocsCatalog.test.ts +1 -1
  278. package/src/__tests__/fixtures/auto-group/mixed-lc-ms-batch.txt +187 -0
  279. package/src/components/AppSidebar.vue +2 -6
  280. package/src/components/AppTopBar.navigation.ts +62 -0
  281. package/src/components/AppTopBar.vue +17 -44
  282. package/src/components/AutoGroupModal.story.vue +50 -0
  283. package/src/components/AutoGroupModal.vue +441 -158
  284. package/src/components/ControlWorkspaceView.vue +2 -6
  285. package/src/components/DoseCalculator.vue +13 -73
  286. package/src/components/DoseCalculatorVolumeField.vue +61 -0
  287. package/src/components/ExperimentTimeline.vue +6 -31
  288. package/src/components/FormBuilder.vue +2 -7
  289. package/src/components/PlateMapEditor.vue +32 -106
  290. package/src/components/PluginWorkspaceView.controls.ts +182 -0
  291. package/src/components/PluginWorkspaceView.navigation.ts +106 -0
  292. package/src/components/PluginWorkspaceView.props.ts +174 -0
  293. package/src/components/PluginWorkspaceView.shell.ts +66 -0
  294. package/src/components/PluginWorkspaceView.vue +85 -404
  295. package/src/components/ProtocolStep.presentation.ts +31 -0
  296. package/src/components/ProtocolStepEditor.state.ts +104 -0
  297. package/src/components/ProtocolStepEditor.vue +48 -179
  298. package/src/components/ProtocolStepParameterField.vue +134 -0
  299. package/src/components/ReagentList.presentation.ts +105 -0
  300. package/src/components/ReagentList.vue +16 -79
  301. package/src/components/SampleSelector.colors.ts +43 -0
  302. package/src/components/SampleSelector.drag.ts +164 -0
  303. package/src/components/SampleSelector.groups.ts +109 -0
  304. package/src/components/SampleSelector.selection.ts +103 -0
  305. package/src/components/SampleSelector.vue +82 -349
  306. package/src/components/SampleSelectorSampleRow.vue +64 -0
  307. package/src/components/ScheduleCalendar.vue +44 -199
  308. package/src/components/SettingsModal.schema.ts +71 -0
  309. package/src/components/SettingsModal.vue +16 -46
  310. package/src/components/WellPlate.colors.ts +56 -0
  311. package/src/components/WellPlate.conditions.ts +100 -0
  312. package/src/components/WellPlate.geometry.ts +91 -0
  313. package/src/components/WellPlate.interaction.ts +272 -0
  314. package/src/components/WellPlate.legend.ts +8 -0
  315. package/src/components/WellPlate.rendering.ts +105 -0
  316. package/src/components/WellPlate.sampleDrop.ts +73 -0
  317. package/src/components/WellPlate.vue +102 -550
  318. package/src/components/internal/PlateMapEditorToolbarInternal.vue +128 -0
  319. package/src/composables/autoGroup/classKey.ts +5 -0
  320. package/src/composables/autoGroup/classify.ts +205 -0
  321. package/src/composables/autoGroup/colors.ts +6 -0
  322. package/src/composables/autoGroup/columns.ts +226 -0
  323. package/src/composables/autoGroup/compose.ts +156 -0
  324. package/src/composables/autoGroup/cooccurrence.ts +46 -0
  325. package/src/composables/autoGroup/csv-shim.ts +44 -0
  326. package/src/composables/autoGroup/fingerprint.ts +49 -0
  327. package/src/composables/autoGroup/index.ts +20 -0
  328. package/src/composables/autoGroup/replicatePreGroup.ts +90 -0
  329. package/src/composables/autoGroup/template.ts +126 -0
  330. package/src/composables/autoGroup/tokenize.ts +41 -0
  331. package/src/composables/autoGroup/vocab.json +67 -0
  332. package/src/composables/autoGroupConstants.ts +4 -0
  333. package/src/composables/autoGroupGrouping.ts +148 -0
  334. package/src/composables/controlComponentBindings.ts +80 -0
  335. package/src/composables/controlSchemaAdapters.ts +196 -0
  336. package/src/composables/controlSchemaDoseDesign.ts +215 -0
  337. package/src/composables/controlSchemaFormFields.ts +61 -0
  338. package/src/composables/controlSchemaLayout.ts +59 -0
  339. package/src/composables/controlSchemaModel.ts +163 -0
  340. package/src/composables/controlSchemaNormalize.ts +101 -0
  341. package/src/composables/controlSchemaTypes.ts +364 -0
  342. package/src/composables/controlSchemaUtils.ts +36 -0
  343. package/src/composables/controlWorkspaceOptions.ts +21 -0
  344. package/src/composables/formBuilderSchema.ts +153 -0
  345. package/src/composables/pluginEndpointBuilder.ts +203 -0
  346. package/src/composables/protocolTemplateCatalog.ts +325 -0
  347. package/src/composables/useAutoGroup.ts +395 -549
  348. package/src/composables/useAutoGroupInputSources.ts +147 -0
  349. package/src/composables/useBioTemplateControls.ts +1 -1
  350. package/src/composables/useBioTemplatePresetWorkspace.ts +1 -1
  351. package/src/composables/useBioTemplateWorkspace.ts +1 -1
  352. package/src/composables/useControlSchema.ts +64 -1312
  353. package/src/composables/useControlWorkspace.ts +201 -0
  354. package/src/composables/useForm.ts +5 -187
  355. package/src/composables/useFormBuilder.ts +11 -153
  356. package/src/composables/useFormValidation.ts +154 -0
  357. package/src/composables/usePluginClient.ts +10 -193
  358. package/src/composables/useProtocolTemplates.ts +10 -328
  359. package/src/composables/useScheduleCalendarLayout.ts +287 -0
  360. package/src/styles/components/auto-group-modal.css +248 -310
  361. package/src/templates/adapters.ts +89 -930
  362. package/src/templates/assayLookups.ts +33 -0
  363. package/src/templates/assayMatrixAdapters.ts +78 -0
  364. package/src/templates/assayMatrixBuilder.ts +59 -0
  365. package/src/templates/assayNormalizers.ts +34 -0
  366. package/src/templates/builderDefaults.ts +11 -0
  367. package/src/templates/builderIdUtils.ts +20 -0
  368. package/src/templates/builderPresetControls.ts +165 -0
  369. package/src/templates/builderReadUtils.ts +57 -0
  370. package/src/templates/builders.ts +122 -2350
  371. package/src/templates/calibrationCurveAdapters.ts +59 -0
  372. package/src/templates/calibrationCurveBuilder.ts +99 -0
  373. package/src/templates/calibrationNormalizers.ts +60 -0
  374. package/src/templates/componentBindingCatalog.ts +90 -0
  375. package/src/templates/componentBindingHelpers.ts +93 -0
  376. package/src/templates/componentBindings.ts +12 -461
  377. package/src/templates/componentDoseResponseProps.ts +42 -0
  378. package/src/templates/componentGenericProps.ts +77 -0
  379. package/src/templates/componentPlateHelpers.ts +29 -0
  380. package/src/templates/componentPlateMapProps.ts +32 -0
  381. package/src/templates/componentPropsFactory.ts +21 -0
  382. package/src/templates/componentQpcrPlateProps.ts +28 -0
  383. package/src/templates/componentTargetResolvers.ts +69 -0
  384. package/src/templates/componentTemplateProps.ts +78 -0
  385. package/src/templates/controlSchemaClone.ts +32 -0
  386. package/src/templates/controlSchemaConstants.ts +11 -0
  387. package/src/templates/controlSchemaMerge.ts +40 -0
  388. package/src/templates/controlSchemaTargets.ts +87 -0
  389. package/src/templates/controlSchemaTypes.ts +20 -0
  390. package/src/templates/controlSchemas.ts +22 -704
  391. package/src/templates/defaultBioTemplateBuilder.ts +124 -0
  392. package/src/templates/doseResponseAdapters.ts +45 -0
  393. package/src/templates/doseResponseBuilder.ts +44 -0
  394. package/src/templates/elisaAssayCollectionBuilder.ts +62 -0
  395. package/src/templates/flowCytometryAssayCollectionBuilder.ts +41 -0
  396. package/src/templates/flowCytometryPanelBuilder.ts +53 -0
  397. package/src/templates/flowNormalizers.ts +58 -0
  398. package/src/templates/flowPanelAdapters.ts +58 -0
  399. package/src/templates/instrumentRunAdapterHelpers.ts +94 -0
  400. package/src/templates/instrumentRunAdapters.ts +163 -0
  401. package/src/templates/instrumentRunBuilder.ts +97 -0
  402. package/src/templates/lcmsBatchCollectionBuilder.ts +38 -0
  403. package/src/templates/plateGeometry.ts +62 -0
  404. package/src/templates/plateMapAdapters.ts +36 -0
  405. package/src/templates/plateMapBuilder.ts +43 -0
  406. package/src/templates/presetControlSchemas.ts +258 -0
  407. package/src/templates/protocolAdapters.ts +69 -0
  408. package/src/templates/protocolNormalizers.ts +37 -0
  409. package/src/templates/protocolStepsBuilder.ts +36 -0
  410. package/src/templates/qpcrAdapters.ts +104 -0
  411. package/src/templates/qpcrExpressionCollectionBuilder.ts +33 -0
  412. package/src/templates/qpcrPlateBuilder.ts +96 -0
  413. package/src/templates/reagentAdapters.ts +77 -0
  414. package/src/templates/reagentListBuilder.ts +30 -0
  415. package/src/templates/runNormalizers.ts +63 -0
  416. package/src/templates/sampleNormalizers.ts +58 -0
  417. package/src/templates/samplePrepAdapters.ts +63 -0
  418. package/src/templates/samplePrepBuilder.ts +51 -0
  419. package/src/templates/sampleSheetAdapters.ts +75 -0
  420. package/src/templates/sampleSheetBuilder.ts +23 -0
  421. package/src/templates/targetedMetabolomicsCollectionBuilder.ts +79 -0
  422. package/src/templates/targetedMetabolomicsHelpers.ts +102 -0
  423. package/src/templates/templateAdapterTypes.ts +58 -0
  424. package/src/templates/templateControlSchemas.ts +320 -0
  425. package/src/templates/templateCreateOptions.ts +208 -0
  426. package/src/templates/templateEnvelopes.ts +137 -0
  427. package/src/templates/templatePackCollectionBuilder.ts +23 -0
  428. package/src/templates/templatePresetCollectionBuilder.ts +139 -0
  429. package/src/templates/templateQpcrTypes.ts +48 -0
  430. package/src/templates/templateValidators.ts +414 -0
  431. package/src/templates/timeCourseAdapters.ts +73 -0
  432. package/src/templates/timeCourseBuilder.ts +64 -0
  433. package/src/templates/types.ts +79 -275
  434. package/src/templates/wellPlateScreenCollectionBuilder.ts +36 -0
  435. package/src/templates/westernBlotAssayCollectionBuilder.ts +68 -0
  436. package/src/types/auto-group.ts +107 -9
  437. package/src/types/componentLabTypes.ts +235 -0
  438. package/src/types/componentWorkflowTypes.ts +190 -0
  439. package/src/types/components.ts +74 -424
  440. package/dist/components-BhK-dW99.js.map +0 -1
  441. package/dist/composables-Bg7CFuNz.js.map +0 -1
  442. package/dist/templates-BorLR_7p.js.map +0 -1
  443. package/dist/useProtocolTemplates-n6AJqSqv.js.map +0 -1
@@ -0,0 +1,44 @@
1
+ import { mount } from '@vue/test-utils'
2
+ import { describe, expect, it } from 'vitest'
3
+ import ProtocolStepParameterField from '../../components/ProtocolStepParameterField.vue'
4
+ import type { ParameterDefinition } from '../../composables/useProtocolTemplates'
5
+
6
+ describe('ProtocolStepParameterField', () => {
7
+ it('emits numeric parameter changes with valueAsNumber', async () => {
8
+ const parameter: ParameterDefinition = {
9
+ key: 'temperature',
10
+ label: 'Temperature',
11
+ type: 'temperature',
12
+ unit: 'C',
13
+ }
14
+
15
+ const wrapper = mount(ProtocolStepParameterField, {
16
+ props: {
17
+ parameter,
18
+ modelValue: 37,
19
+ },
20
+ })
21
+
22
+ await wrapper.get('input').setValue('25')
23
+ expect(wrapper.emitted('update:modelValue')?.at(-1)).toEqual([25])
24
+ })
25
+
26
+ it('renders field validation errors', () => {
27
+ const parameter: ParameterDefinition = {
28
+ key: 'buffer',
29
+ label: 'Buffer',
30
+ type: 'select',
31
+ options: [{ value: 'PBS', label: 'PBS' }],
32
+ }
33
+
34
+ const wrapper = mount(ProtocolStepParameterField, {
35
+ props: {
36
+ parameter,
37
+ error: 'Buffer is required',
38
+ },
39
+ })
40
+
41
+ expect(wrapper.text()).toContain('Buffer is required')
42
+ expect(wrapper.get('select').classes()).toContain('mint-protocol-editor__input--error')
43
+ })
44
+ })
@@ -0,0 +1,68 @@
1
+ import { describe, expect, it } from 'vitest'
2
+ import type { Reagent } from '../../types'
3
+ import {
4
+ formatReagentExpiryDate,
5
+ getReagentColumnValue,
6
+ getReagentRowClasses,
7
+ getReagentStockFillClass,
8
+ getReagentStockLevel,
9
+ isReagentExpired,
10
+ isReagentExpiringSoon,
11
+ isReagentLowStock,
12
+ } from '../../components/ReagentList.presentation'
13
+
14
+ describe('ReagentList presentation helpers', () => {
15
+ const reagent: Reagent = {
16
+ id: 'reagent-1',
17
+ name: 'Glucose',
18
+ catalogNumber: 'G-7528',
19
+ lotNumber: 'LOT-A',
20
+ supplier: 'Sigma',
21
+ expiryDate: '2026-06-01T00:00:00.000Z',
22
+ stockLevel: 12,
23
+ }
24
+
25
+ it('extracts sortable values for table columns', () => {
26
+ expect(getReagentColumnValue(reagent, 'name')).toBe('Glucose')
27
+ expect(getReagentColumnValue(reagent, 'catalog')).toBe('G-7528')
28
+ expect(getReagentColumnValue(reagent, 'expiry')).toBe(new Date(reagent.expiryDate!).getTime())
29
+ expect(getReagentColumnValue({ id: 'empty', name: 'Empty' }, 'stock')).toBeUndefined()
30
+ })
31
+
32
+ it('classifies expiry states relative to a supplied date', () => {
33
+ const now = new Date('2026-05-22T00:00:00.000Z')
34
+
35
+ expect(isReagentExpired(reagent, now)).toBe(false)
36
+ expect(isReagentExpiringSoon(reagent, 30, now)).toBe(true)
37
+ expect(isReagentExpired({ ...reagent, expiryDate: '2026-05-01T00:00:00.000Z' }, now)).toBe(true)
38
+ })
39
+
40
+ it('classifies low stock and stock fill tone', () => {
41
+ expect(isReagentLowStock(reagent, 15)).toBe(true)
42
+ expect(getReagentStockLevel({ id: 'missing', name: 'Missing' })).toBe(0)
43
+ expect(getReagentStockFillClass(70)).toBe('mint-reagent-list__stock-fill--good')
44
+ expect(getReagentStockFillClass(30)).toBe('mint-reagent-list__stock-fill--warning')
45
+ expect(getReagentStockFillClass(10)).toBe('mint-reagent-list__stock-fill--low')
46
+ })
47
+
48
+ it('formats missing and present expiry dates', () => {
49
+ expect(formatReagentExpiryDate(undefined)).toBe('-')
50
+ expect(formatReagentExpiryDate('2026-06-01T00:00:00.000Z')).toBe('Jun 2026')
51
+ })
52
+
53
+ it('builds row state classes without mixing expired and expiring-soon', () => {
54
+ expect(
55
+ getReagentRowClasses(reagent, {
56
+ lowStockThreshold: 15,
57
+ draggedId: 'reagent-1',
58
+ dragOverId: 'reagent-2',
59
+ now: new Date('2026-05-22T00:00:00.000Z'),
60
+ })
61
+ ).toEqual([
62
+ 'mint-reagent-list__row',
63
+ 'mint-reagent-list__row--expiring-soon',
64
+ 'mint-reagent-list__row--low-stock',
65
+ 'mint-reagent-list__row--dragging',
66
+ ])
67
+ })
68
+ })
@@ -0,0 +1,49 @@
1
+ import { describe, expect, it } from 'vitest'
2
+ import type { SampleGroup } from '../../types'
3
+ import {
4
+ DEFAULT_COLOR_PICKER_SEED,
5
+ applySampleGroupColorEdit,
6
+ createSampleGroup,
7
+ getSampleGroupColorEditSeed,
8
+ } from '../../components/SampleSelector.colors'
9
+
10
+ const groups: SampleGroup[] = [
11
+ { name: 'Control/A', color: '#3B82F6', samples: ['S1'] },
12
+ { name: 'Control/B', color: '#06B6D4', samples: ['S2'] },
13
+ ]
14
+
15
+ describe('SampleSelector color helpers', () => {
16
+ it('applies a single group color edit without mutating other groups', () => {
17
+ const updated = applySampleGroupColorEdit(
18
+ groups,
19
+ { kind: 'single', name: 'Control/B' },
20
+ '#111111',
21
+ )
22
+
23
+ expect(updated.map(group => group.color)).toEqual(['#3B82F6', '#111111'])
24
+ expect(groups.map(group => group.color)).toEqual(['#3B82F6', '#06B6D4'])
25
+ })
26
+
27
+ it('applies a family color edit to every named subgroup', () => {
28
+ const updated = applySampleGroupColorEdit(
29
+ groups,
30
+ { kind: 'family', names: ['Control/A', 'Control/B'] },
31
+ '#222222',
32
+ )
33
+
34
+ expect(updated.map(group => group.color)).toEqual(['#222222', '#222222'])
35
+ })
36
+
37
+ it('returns the default color seed when no color edit is active', () => {
38
+ expect(getSampleGroupColorEditSeed(null, name => name)).toBe(DEFAULT_COLOR_PICKER_SEED)
39
+ })
40
+
41
+ it('creates trimmed empty sample groups with the next unused default color', () => {
42
+ expect(createSampleGroup(' Treatment ', groups)).toEqual({
43
+ name: 'Treatment',
44
+ color: '#10B981',
45
+ samples: [],
46
+ })
47
+ expect(createSampleGroup(' ', groups)).toBeNull()
48
+ })
49
+ })
@@ -0,0 +1,100 @@
1
+ import { ref } from 'vue'
2
+ import { describe, expect, it } from 'vitest'
3
+ import type { SampleGroup } from '../../types'
4
+ import { useSampleSelectorDrag } from '../../components/SampleSelector.drag'
5
+
6
+ type TestDataTransfer = DataTransfer & { data: Record<string, string> }
7
+ type TestDragEvent = Omit<DragEvent, 'dataTransfer'> & {
8
+ dataTransfer: TestDataTransfer
9
+ defaultPrevented: boolean
10
+ }
11
+
12
+ function createDragEvent(options: { clientY?: number; top?: number; height?: number } = {}) {
13
+ const data: Record<string, string> = {}
14
+ const transfer = {
15
+ effectAllowed: '',
16
+ dropEffect: '',
17
+ data,
18
+ setData(type: string, value: string) {
19
+ data[type] = value
20
+ },
21
+ } as unknown as TestDataTransfer
22
+ let prevented = false
23
+ const target = {
24
+ getBoundingClientRect: () => ({
25
+ top: options.top ?? 0,
26
+ height: options.height ?? 20,
27
+ }),
28
+ contains: () => false,
29
+ }
30
+
31
+ return {
32
+ dataTransfer: transfer,
33
+ preventDefault: () => {
34
+ prevented = true
35
+ },
36
+ get defaultPrevented() {
37
+ return prevented
38
+ },
39
+ clientY: options.clientY ?? 0,
40
+ currentTarget: target,
41
+ relatedTarget: null,
42
+ } as unknown as TestDragEvent
43
+ }
44
+
45
+ const groups: SampleGroup[] = [
46
+ { name: 'Treatment/A', color: '#111111', samples: ['S1'] },
47
+ { name: 'Treatment/B', color: '#222222', samples: ['S2'] },
48
+ { name: 'Control/A', color: '#333333', samples: ['S3'] },
49
+ { name: 'Control/B', color: '#444444', samples: ['S4'] },
50
+ ]
51
+
52
+ describe('SampleSelector drag helpers', () => {
53
+ it('moves dragged samples between groups and resets sample drag state', () => {
54
+ const state = ref<SampleGroup[]>([
55
+ { name: 'A', color: '#111111', samples: ['S1'] },
56
+ { name: 'B', color: '#222222', samples: ['S2'] },
57
+ ])
58
+ const drag = useSampleSelectorDrag(state)
59
+ const startEvent = createDragEvent()
60
+ const overEvent = createDragEvent()
61
+ const dropEvent = createDragEvent()
62
+
63
+ drag.handleDragStart('S1', 'A', startEvent)
64
+ drag.handleDragOver('B', overEvent)
65
+ drag.handleDrop('B', dropEvent)
66
+
67
+ expect(startEvent.dataTransfer.data['text/plain']).toBe('S1')
68
+ expect(overEvent.dataTransfer.dropEffect).toBe('move')
69
+ expect(dropEvent.defaultPrevented).toBe(true)
70
+ expect(state.value.map(group => group.samples)).toEqual([[], ['S2', 'S1']])
71
+ expect(drag.draggingSample.value).toBeNull()
72
+ expect(drag.dragOverGroup.value).toBeNull()
73
+ })
74
+
75
+ it('reorders sibling subgroups without allowing cross-major drops', () => {
76
+ const state = ref(groups)
77
+ const drag = useSampleSelectorDrag(state)
78
+
79
+ drag.handleGroupDragStart('Control/A', 'sub', createDragEvent())
80
+ drag.handleGroupDragOver('Treatment/A', 'sub', createDragEvent({ clientY: 2 }))
81
+
82
+ expect(drag.reorderTarget.value).toBeNull()
83
+
84
+ const overEvent = createDragEvent({ clientY: 18 })
85
+ const dropEvent = createDragEvent()
86
+ drag.handleGroupDragOver('Control/B', 'sub', overEvent)
87
+ drag.handleGroupDrop('Control/B', 'sub', dropEvent)
88
+
89
+ expect(overEvent.dataTransfer.dropEffect).toBe('move')
90
+ expect(dropEvent.defaultPrevented).toBe(true)
91
+ expect(state.value.map(group => group.name)).toEqual([
92
+ 'Treatment/A',
93
+ 'Treatment/B',
94
+ 'Control/B',
95
+ 'Control/A',
96
+ ])
97
+ expect(drag.draggingGroup.value).toBeNull()
98
+ expect(drag.reorderTarget.value).toBeNull()
99
+ })
100
+ })
@@ -0,0 +1,81 @@
1
+ import { describe, expect, it } from 'vitest'
2
+ import type { SampleGroup } from '../../types'
3
+ import {
4
+ detectSampleGroupSeparator,
5
+ getSampleGroupMajorPrefix,
6
+ moveSampleToGroup,
7
+ removeSampleFromGroup,
8
+ removeSampleGroup,
9
+ removeSampleMajorGroup,
10
+ reorderSampleGroup,
11
+ reorderSampleMajorGroup,
12
+ } from '../../components/SampleSelector.groups'
13
+
14
+ const groups: SampleGroup[] = [
15
+ { name: 'Treatment/A', color: '#111111', samples: ['S1'] },
16
+ { name: 'Treatment/B', color: '#222222', samples: ['S2'] },
17
+ { name: 'Control/A', color: '#333333', samples: ['S3'] },
18
+ { name: 'Control/B', color: '#444444', samples: ['S4'] },
19
+ ]
20
+
21
+ describe('SampleSelector group helpers', () => {
22
+ it('detects the hierarchy separator from group names', () => {
23
+ expect(detectSampleGroupSeparator(groups)).toBe('/')
24
+ expect(detectSampleGroupSeparator([{ name: 'Control_A', color: '#111111', samples: [] }])).toBe('_')
25
+ })
26
+
27
+ it('extracts major group prefixes with the detected separator', () => {
28
+ expect(getSampleGroupMajorPrefix('Treatment/A', '/')).toBe('Treatment')
29
+ expect(getSampleGroupMajorPrefix('Ungrouped', '/')).toBe('Ungrouped')
30
+ })
31
+
32
+ it('moves a sample from one group to another without duplicating target samples', () => {
33
+ const moved = moveSampleToGroup(groups, 'S1', 'Treatment/A', 'Control/A')
34
+
35
+ expect(moved.map(group => group.samples)).toEqual([[], ['S2'], ['S3', 'S1'], ['S4']])
36
+ expect(moveSampleToGroup(groups, 'S3', null, 'Control/A')[2].samples).toEqual(['S3'])
37
+ })
38
+
39
+ it('removes groups and samples without mutating the source array', () => {
40
+ expect(removeSampleGroup(groups, 'Treatment/B').map(group => group.name)).toEqual([
41
+ 'Treatment/A',
42
+ 'Control/A',
43
+ 'Control/B',
44
+ ])
45
+ expect(
46
+ removeSampleMajorGroup(groups, {
47
+ subGroups: [{ name: 'Treatment/A' }, { name: 'Treatment/B' }],
48
+ }).map(group => group.name),
49
+ ).toEqual(['Control/A', 'Control/B'])
50
+ expect(removeSampleFromGroup(groups, 'S1', 'Treatment/A')[0].samples).toEqual([])
51
+ expect(groups[0].samples).toEqual(['S1'])
52
+ })
53
+
54
+ it('reorders flat groups without mutating the source array', () => {
55
+ const reordered = reorderSampleGroup(groups, 'Control/A', 'Treatment/A', 'before')
56
+
57
+ expect(reordered.map(group => group.name)).toEqual([
58
+ 'Control/A',
59
+ 'Treatment/A',
60
+ 'Treatment/B',
61
+ 'Control/B',
62
+ ])
63
+ expect(groups.map(group => group.name)).toEqual([
64
+ 'Treatment/A',
65
+ 'Treatment/B',
66
+ 'Control/A',
67
+ 'Control/B',
68
+ ])
69
+ })
70
+
71
+ it('reorders major group families as contiguous blocks', () => {
72
+ const reordered = reorderSampleMajorGroup(groups, 'Control', 'Treatment', 'before')
73
+
74
+ expect(reordered.map(group => group.name)).toEqual([
75
+ 'Control/A',
76
+ 'Control/B',
77
+ 'Treatment/A',
78
+ 'Treatment/B',
79
+ ])
80
+ })
81
+ })
@@ -0,0 +1,70 @@
1
+ import { ref } from 'vue'
2
+ import { describe, expect, it } from 'vitest'
3
+ import type { SampleGroup } from '../../types'
4
+ import type { SampleMajorGroup } from '../../composables/useSampleGroups'
5
+ import { useSampleSelectorSelection } from '../../components/SampleSelector.selection'
6
+
7
+ const groups: SampleGroup[] = [
8
+ { name: 'Control/A', color: '#111111', samples: ['S1', 'S2'] },
9
+ { name: 'Treatment/A', color: '#222222', samples: ['S3'] },
10
+ ]
11
+
12
+ function createSelection(selected: string[] = []) {
13
+ const selectedRef = ref(selected)
14
+ const emitted: string[][] = []
15
+ const selection = useSampleSelectorSelection({
16
+ selected: () => selectedRef.value,
17
+ samples: () => ['S1', 'S2', 'S3'],
18
+ findGroup: groupName => groups.find(group => group.name === groupName),
19
+ emitSelected: samples => {
20
+ emitted.push(samples)
21
+ selectedRef.value = samples
22
+ },
23
+ })
24
+
25
+ return { emitted, selectedRef, selection }
26
+ }
27
+
28
+ describe('SampleSelector selection helpers', () => {
29
+ it('adapts select-all and single-sample toggles to update events', () => {
30
+ const { emitted, selection } = createSelection()
31
+
32
+ selection.toggleSelectAll()
33
+ selection.toggleSample('S1')
34
+
35
+ expect(emitted).toEqual([
36
+ ['S1', 'S2', 'S3'],
37
+ ['S2', 'S3'],
38
+ ])
39
+ expect(selection.isAllSelected.value).toBe(false)
40
+ })
41
+
42
+ it('toggles sample groups and exposes group selection state', () => {
43
+ const { emitted, selection } = createSelection(['S1'])
44
+
45
+ expect(selection.isGroupPartiallySelected('Control/A')).toBe(true)
46
+ expect(selection.isGroupFullySelected('Control/A')).toBe(false)
47
+
48
+ selection.toggleGroupSamples('Control/A')
49
+
50
+ expect(emitted[0]).toEqual(['S1', 'S2'])
51
+ expect(selection.isGroupFullySelected('Control/A')).toBe(true)
52
+ })
53
+
54
+ it('handles major groups through their aggregate sample list', () => {
55
+ const majorGroup: SampleMajorGroup = {
56
+ name: 'Control',
57
+ color: '#111111',
58
+ subGroups: [],
59
+ allSamples: ['S1', 'S2'],
60
+ }
61
+ const { emitted, selection } = createSelection(['S1', 'S2'])
62
+
63
+ expect(selection.isMajorGroupFullySelected(majorGroup)).toBe(true)
64
+
65
+ selection.toggleMajorGroupSamples(majorGroup)
66
+
67
+ expect(emitted[0]).toEqual([])
68
+ expect(selection.isMajorGroupPartiallySelected(majorGroup)).toBe(false)
69
+ })
70
+ })
@@ -1,6 +1,7 @@
1
1
  import { mount } from '@vue/test-utils'
2
2
  import { describe, expect, it } from 'vitest'
3
3
  import SampleSelector from '../../components/SampleSelector.vue'
4
+ import type { AutoGroupResult, SampleGroup } from '../../types'
4
5
 
5
6
  describe('SampleSelector', () => {
6
7
  it('uses shared list selection for select-all and individual sample toggles', async () => {
@@ -83,3 +84,34 @@ describe('SampleSelector', () => {
83
84
  expect(wrapper.findAll('.mint-sample-selector__flat-name').map(item => item.text())).toEqual(['S1', 'S2'])
84
85
  })
85
86
  })
87
+
88
+ describe('SampleSelector — QC overlay regression', () => {
89
+ it('keeps QC samples in the emitted groups via the concat compat rule', async () => {
90
+ const exp: SampleGroup[] = [
91
+ { name: 'Kidney', color: '#3B82F6', samples: ['s1', 's2'] },
92
+ ]
93
+ const qc: SampleGroup[] = [
94
+ { name: 'IQC', color: '#6B7280', samples: ['iqc1'] },
95
+ ]
96
+ const result: AutoGroupResult = {
97
+ groups: [...exp, ...qc],
98
+ experimentalGroups: exp,
99
+ qcGroups: qc,
100
+ metadata: [],
101
+ excludedSamples: [],
102
+ }
103
+ const wrapper = mount(SampleSelector, {
104
+ props: { samples: ['s1', 's2', 'iqc1'], modelValue: [] },
105
+ global: {
106
+ stubs: {
107
+ AutoGroupModal: true,
108
+ },
109
+ },
110
+ })
111
+ ;(wrapper.vm as unknown as { handleSmartGroupApply: (r: AutoGroupResult) => void })
112
+ .handleSmartGroupApply(result)
113
+ const emitted = wrapper.emitted('update:groups')!.at(-1)![0] as SampleGroup[]
114
+ const allSamples = emitted.flatMap(g => g.samples)
115
+ expect(allSamples).toContain('iqc1')
116
+ })
117
+ })
@@ -0,0 +1,37 @@
1
+ import { mount } from '@vue/test-utils'
2
+ import { describe, expect, it } from 'vitest'
3
+ import SampleSelectorSampleRow from '../../components/SampleSelectorSampleRow.vue'
4
+
5
+ describe('SampleSelectorSampleRow', () => {
6
+ it('renders selected and dragging states', () => {
7
+ const wrapper = mount(SampleSelectorSampleRow, {
8
+ props: {
9
+ sample: 'S1',
10
+ selected: true,
11
+ dragging: true,
12
+ accentColor: '#3B82F6',
13
+ },
14
+ })
15
+
16
+ expect(wrapper.classes()).toContain('mint-sample-selector__sample--dragging')
17
+ expect((wrapper.get('input').element as HTMLInputElement).checked).toBe(true)
18
+ expect(wrapper.get('input').attributes('style')).toContain('accent-color')
19
+ expect(wrapper.text()).toContain('S1')
20
+ })
21
+
22
+ it('emits toggle and remove actions', async () => {
23
+ const wrapper = mount(SampleSelectorSampleRow, {
24
+ props: {
25
+ sample: 'S2',
26
+ selected: false,
27
+ removable: true,
28
+ },
29
+ })
30
+
31
+ await wrapper.get('input').trigger('change')
32
+ await wrapper.get('button').trigger('click')
33
+
34
+ expect(wrapper.emitted('toggle')).toHaveLength(1)
35
+ expect(wrapper.emitted('remove')).toHaveLength(1)
36
+ })
37
+ })
@@ -0,0 +1,44 @@
1
+ import { mount } from '@vue/test-utils'
2
+ import { describe, expect, it } from 'vitest'
3
+ import ScheduleCalendar from '../../components/ScheduleCalendar.vue'
4
+
5
+ describe('ScheduleCalendar', () => {
6
+ it('renders week events with layout styles from the schedule model', () => {
7
+ const wrapper = mount(ScheduleCalendar, {
8
+ props: {
9
+ modelValue: new Date('2024-05-15T12:00:00'),
10
+ dayStartHour: 6,
11
+ dayEndHour: 10,
12
+ slotDuration: 30,
13
+ showNowIndicator: false,
14
+ events: [
15
+ {
16
+ id: 'run-1',
17
+ title: 'LCMS run',
18
+ start: '2024-05-15T07:00:00',
19
+ end: '2024-05-15T08:30:00',
20
+ },
21
+ ],
22
+ },
23
+ })
24
+
25
+ const event = wrapper.find('.mint-schedule__event')
26
+ expect(event.exists()).toBe(true)
27
+ expect(event.find('.mint-schedule__event-title').text()).toBe('LCMS run')
28
+ expect(event.attributes('style')).toContain('top: 80px')
29
+ expect(event.attributes('style')).toContain('height: 120px')
30
+ })
31
+
32
+ it('renders the month grid from the extracted calendar layout', () => {
33
+ const wrapper = mount(ScheduleCalendar, {
34
+ props: {
35
+ modelValue: new Date('2024-05-15T12:00:00'),
36
+ view: 'month',
37
+ },
38
+ })
39
+
40
+ expect(wrapper.findAll('.mint-schedule__month-weekday')).toHaveLength(7)
41
+ expect(wrapper.findAll('.mint-schedule__month-cell')).toHaveLength(42)
42
+ expect(wrapper.find('.mint-schedule__title').text()).toBe('May 2024')
43
+ })
44
+ })
@@ -0,0 +1,97 @@
1
+ import { describe, expect, it } from 'vitest'
2
+ import type { SettingsModalSchema, SettingsTabInput } from '../../types'
3
+ import {
4
+ APPEARANCE_TAB,
5
+ buildFlatSettingsSchema,
6
+ buildSettingsTabs,
7
+ filterSettingsSchemaByAccess,
8
+ normalizeVisibleSettingsTabs,
9
+ settingsGroupToTab,
10
+ } from '../../components/SettingsModal.schema'
11
+
12
+ describe('SettingsModal schema helpers', () => {
13
+ const schema: SettingsModalSchema = {
14
+ groups: [
15
+ {
16
+ id: 'general',
17
+ label: 'General',
18
+ description: 'Shared settings',
19
+ icon: '<svg />',
20
+ fields: [
21
+ { name: 'title', label: 'Title', type: 'text' },
22
+ { name: 'adminOnly', label: 'Admin Only', type: 'text', requiresAdmin: true },
23
+ ],
24
+ columns: 2,
25
+ },
26
+ {
27
+ id: 'hidden',
28
+ label: 'Hidden',
29
+ requiresAdmin: true,
30
+ fields: [
31
+ { name: 'secret', label: 'Secret', type: 'text' },
32
+ ],
33
+ },
34
+ ],
35
+ }
36
+
37
+ it('builds flat form sections from settings groups', () => {
38
+ expect(buildFlatSettingsSchema(schema)).toEqual({
39
+ sections: [
40
+ {
41
+ id: 'general',
42
+ title: '',
43
+ fields: schema.groups[0].fields,
44
+ columns: 2,
45
+ condition: undefined,
46
+ },
47
+ {
48
+ id: 'hidden',
49
+ title: '',
50
+ fields: schema.groups[1].fields,
51
+ columns: undefined,
52
+ condition: undefined,
53
+ },
54
+ ],
55
+ })
56
+ })
57
+
58
+ it('filters groups and fields with the caller access policy', () => {
59
+ const filtered = filterSettingsSchemaByAccess(
60
+ schema,
61
+ (item) => !item.requiresAdmin
62
+ )
63
+
64
+ expect(filtered.groups).toHaveLength(1)
65
+ expect(filtered.groups[0].id).toBe('general')
66
+ expect(filtered.groups[0].fields.map(field => field.name)).toEqual(['title'])
67
+ })
68
+
69
+ it('maps visible schema groups to tabs', () => {
70
+ expect(settingsGroupToTab(schema.groups[0])).toEqual({
71
+ id: 'general',
72
+ label: 'General',
73
+ description: 'Shared settings',
74
+ icon: '<svg />',
75
+ })
76
+ })
77
+
78
+ it('normalizes manual tabs before access filtering', () => {
79
+ const tabs: SettingsTabInput[] = [
80
+ 'General',
81
+ { id: 'admin', label: 'Admin', requiresAdmin: true },
82
+ ]
83
+
84
+ expect(
85
+ normalizeVisibleSettingsTabs(tabs, (item) => !item.requiresAdmin)
86
+ ).toEqual([
87
+ { id: 'General', label: 'General' },
88
+ ])
89
+ })
90
+
91
+ it('appends the appearance tab when enabled', () => {
92
+ expect(buildSettingsTabs([{ id: 'general', label: 'General' }], true)).toEqual([
93
+ { id: 'general', label: 'General' },
94
+ APPEARANCE_TAB,
95
+ ])
96
+ })
97
+ })
@@ -0,0 +1,28 @@
1
+ import { describe, expect, it } from 'vitest'
2
+ import {
3
+ conditionGradientStyle,
4
+ formatConcentration,
5
+ getHeatmapColor,
6
+ HEATMAP_COLORS,
7
+ } from '../../components/WellPlate.colors'
8
+
9
+ describe('WellPlate color helpers', () => {
10
+ it('formats concentrations for compact condition headers', () => {
11
+ expect(formatConcentration(1000)).toBe('1k')
12
+ expect(formatConcentration(0.001)).toBe('1e-3')
13
+ expect(formatConcentration(12.5)).toBe('12.5')
14
+ })
15
+
16
+ it('creates readable condition gradient styles', () => {
17
+ expect(conditionGradientStyle('#000000', 10, [0, 10])).toEqual({
18
+ backgroundColor: 'rgba(0, 0, 0, 0.75)',
19
+ color: '#ffffff',
20
+ })
21
+ })
22
+
23
+ it('resolves configured heatmap palette colors', () => {
24
+ expect(getHeatmapColor({ enabled: false }, 1)).toBeNull()
25
+ expect(getHeatmapColor({ enabled: true, min: 0, max: 100 }, 0)).toBe(HEATMAP_COLORS.viridis[0])
26
+ expect(getHeatmapColor({ enabled: true, colorScale: 'custom', customColors: ['#111', '#222'] }, 1)).toBe('#222')
27
+ })
28
+ })