npm - @monoes/monograph - Versions diffs - 1.5.2 → 1.5.4 - Mend

@monoes/monograph 1.5.2 → 1.5.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (504) hide show

package/.monodesign/hook.cache.json +1 -1
package/__tests__/integration/build-atomicity.test.ts +61 -0
package/__tests__/integration/call-attribution.test.ts +116 -0
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package/coverage/src/analysis/changed-files.ts.html +304 -0
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package/coverage/src/analysis/churn-cache.ts.html +622 -0
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package/coverage/src/analysis/churn.ts.html +874 -0
package/coverage/src/analysis/cluster-quality.ts.html +511 -0
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package/coverage/src/analysis/corpus-health.ts.html +208 -0
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package/coverage/src/export/gexf.ts.html +262 -0
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+<span class="cline-any cline-neutral">&nbsp;</span></td><td class="text"><pre class="prettyprint lang-js">import type { PipelinePhase, PipelineContext } from './types.js';
+import { MonographError } from '../types.js';
+&nbsp;
+export class PipelineRunner {
+  private readonly phases: PipelinePhase&lt;unknown&gt;[];
+  /** Topo-sorted phase names, computed once in constructor for O(1) phase map lookups. */
+  private readonly sortedNames: string[];
+  /** O(1) phase lookup by name. */
+  private readonly phaseMap: Map&lt;string, PipelinePhase&lt;unknown&gt;&gt;;
+&nbsp;
+  constructor(phases: PipelinePhase&lt;unknown&gt;[]) {
+    this.phases = phases;
+    this.sortedNames = topoSort(phases);
+    this.phaseMap = new Map(phases.map(p =&gt; [p.name, p]));
+  }
+&nbsp;
+  async run(ctx: PipelineContext): Promise&lt;Map&lt;string, unknown&gt;&gt; {
+    const outputs = new Map&lt;string, unknown&gt;();
+&nbsp;
+    // Lazily-created promise per phase — ensures dep promises exist before they are awaited
+    const promises = new Map&lt;string, Promise&lt;void&gt;&gt;();
+&nbsp;
+    const getOrCreatePromise = (name: string): Promise&lt;void&gt; =&gt; {
+      if (promises.has(name)) return promises.get(name)!;
+      const phase = this.phaseMap.get(name)!;
+      const p = (async () =&gt; {
+        // Wait for all dep phases to finish
+        await Promise.all(phase.deps.map(dep =&gt; getOrCreatePromise(dep)));
+        ctx.onProgress?.({ phase: phase.name });
+        try {
+          const output = await phase.execute(ctx, outputs);
+          outputs.set(phase.name, output);
+        } catch (err) {
+          const msg = err instanceof Error ? err.message : <span class="branch-1 cbranch-no" title="branch not covered" >String(err);</span>
+          throw new MonographError(`Phase '${phase.name}' failed: ${msg}`);
+        }
+      })();
+      promises.set(name, p);
+      return p;
+    };
+&nbsp;
+    // Use allSettled so every in-flight phase completes before we return.
+    // This ensures the DB is not closed while phases are still writing to it,
+    // which would otherwise cause unhandled rejections that hang the process.
+    const results = await Promise.allSettled(this.sortedNames.map(name =&gt; getOrCreatePromise(name)));
+    const failed = results.find(r =&gt; r.status === 'rejected') as PromiseRejectedResult | undefined;
+    if (failed) throw failed.reason;
+    return outputs;
+  }
+}
+&nbsp;
+function topoSort(phases: PipelinePhase&lt;unknown&gt;[]): string[] {
+  const names = new Set(phases.map(p =&gt; p.name));
+  const inDegree = new Map&lt;string, number&gt;();
+  const adjList = new Map&lt;string, string[]&gt;();
+&nbsp;
+  for (const p of phases) {
+    inDegree.set(p.name, p.deps.length);
+    for (const dep of p.deps) {
+      <span class="missing-if-branch" title="if path not taken" >I</span>if (!names.has(dep)) {
+<span class="cstat-no" title="statement not covered" >        throw new MonographError(`Phase '${p.name}' depends on unknown phase '${dep}'`);</span>
+      }
+      const adj = adjList.get(dep) ?? [];
+      adj.push(p.name);
+      adjList.set(dep, adj);
+    }
+  }
+&nbsp;
+  const queue = phases.filter(p =&gt; (inDegree.get(p.name) ?? <span class="branch-1 cbranch-no" title="branch not covered" >0) === 0</span>).map(p =&gt; p.name);
+  const result: string[] = [];
+&nbsp;
+  while (queue.length) {
+    const name = queue.shift()!;
+    result.push(name);
+    for (const next of (adjList.get(name) ?? [])) {
+      const deg = (inDegree.get(next) ?? <span class="branch-1 cbranch-no" title="branch not covered" >0) - 1</span>;
+      inDegree.set(next, deg);
+      if (deg === 0) queue.push(next);
+    }
+  }
+&nbsp;
+  if (result.length !== phases.length) {
+    throw new MonographError('Cycle detected in pipeline phase graph');
+  }
+&nbsp;
+  return result;
+}
+&nbsp;
+export interface IncrementalAstOptions {
+  /** If true, preserve INFERRED and AMBIGUOUS edges during code-only rebuild. Default true. */
+  preserveInferred?: boolean;
+}
+&nbsp;
+/**
+ * Incremental AST-only rebuild: clears EXTRACTED edges (re-parsed from code)
+ * while preserving INFERRED and AMBIGUOUS edges (derived by reasoning).
+ * Accepts a list of changed file paths; if empty, clears all EXTRACTED edges.
+ */
+export async function runIncrementalAst(
+  db: import('better-sqlite3').Database,
+  changedFiles: string[],
+  options: IncrementalAstOptions = {},
+): Promise&lt;void&gt; {
+  const { preserveInferred = true } = options;
+&nbsp;
+  if (preserveInferred) {
+    <span class="missing-if-branch" title="if path not taken" >I</span>if (changedFiles.length &gt; 0) {
+      const placeholders = <span class="cstat-no" title="statement not covered" >changedFiles.<span class="fstat-no" title="function not covered" >map(() =&gt; <span class="cstat-no" title="statement not covered" >'</span>?')</span>.join(',');</span>
+      // Use a CTE to resolve file_path→id once, then delete edges referencing those ids.
+      // This avoids passing changedFiles twice (N*2 params) and lets SQLite reuse the scan.
+<span class="cstat-no" title="statement not covered" >      db.prepare(`</span>
+        WITH changed_ids AS (
+          SELECT id FROM nodes WHERE file_path IN (${placeholders})
+        )
+        DELETE FROM edges
+        WHERE confidence = 'EXTRACTED'
+        AND (
+          source_id IN (SELECT id FROM changed_ids)
+          OR target_id IN (SELECT id FROM changed_ids)
+        )
+      `).run(...changedFiles);
+    } else {
+      db.prepare(`DELETE FROM edges WHERE confidence = 'EXTRACTED'`).run();
+    }
+  } else <span class="missing-if-branch" title="else path not taken" >E</span>{
+<span class="cstat-no" title="statement not covered" >    db.prepare(`DELETE FROM edges`).run();</span>
+  }
+}
+&nbsp;</pre></td></tr></table></pre>
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+                at 2026-07-25T08:38:16.548Z
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