@jbrowse/plugin-wiggle 3.6.5 → 4.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (407) hide show
  1. package/esm/BigWigAdapter/BigWigAdapter.d.ts +14 -1
  2. package/esm/BigWigAdapter/BigWigAdapter.js +118 -22
  3. package/esm/BigWigAdapter/configSchema.d.ts +2 -2
  4. package/esm/BigWigAdapter/configSchema.js +1 -1
  5. package/esm/BigWigAdapter/index.js +2 -2
  6. package/esm/CreateMultiWiggleExtension/ConfirmDialog.js +1 -1
  7. package/esm/CreateMultiWiggleExtension/index.js +2 -2
  8. package/esm/DensityRenderer/DensityRenderer.d.ts +5 -6
  9. package/esm/DensityRenderer/DensityRenderer.js +6 -5
  10. package/esm/DensityRenderer/configSchema.d.ts +3 -3
  11. package/esm/DensityRenderer/configSchema.js +1 -1
  12. package/esm/DensityRenderer/index.js +11 -9
  13. package/esm/DensityRenderer/makeImageData.d.ts +3 -0
  14. package/esm/DensityRenderer/makeImageData.js +13 -0
  15. package/esm/DensityRenderer/renderDensity.d.ts +3 -0
  16. package/esm/DensityRenderer/renderDensity.js +18 -0
  17. package/esm/LinePlotRenderer/LinePlotRenderer.d.ts +5 -7
  18. package/esm/LinePlotRenderer/LinePlotRenderer.js +6 -15
  19. package/esm/LinePlotRenderer/configSchema.d.ts +4 -4
  20. package/esm/LinePlotRenderer/configSchema.js +1 -1
  21. package/esm/LinePlotRenderer/index.js +4 -4
  22. package/esm/LinePlotRenderer/makeImageData.d.ts +3 -0
  23. package/esm/LinePlotRenderer/makeImageData.js +13 -0
  24. package/esm/LinePlotRenderer/renderLinePlot.d.ts +3 -0
  25. package/esm/LinePlotRenderer/renderLinePlot.js +23 -0
  26. package/esm/LinearWiggleDisplay/components/Tooltip.d.ts +2 -2
  27. package/esm/LinearWiggleDisplay/components/Tooltip.js +10 -6
  28. package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  29. package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.js +2 -2
  30. package/esm/LinearWiggleDisplay/configSchema.d.ts +9 -9
  31. package/esm/LinearWiggleDisplay/configSchema.js +2 -2
  32. package/esm/LinearWiggleDisplay/index.d.ts +3 -3
  33. package/esm/LinearWiggleDisplay/index.js +6 -6
  34. package/esm/LinearWiggleDisplay/model.d.ts +1130 -92
  35. package/esm/LinearWiggleDisplay/model.js +58 -18
  36. package/esm/LinearWiggleDisplay/renderSvg.d.ts +1 -1
  37. package/esm/LinearWiggleDisplay/renderSvg.js +3 -2
  38. package/esm/MultiDensityRenderer/MultiDensityRenderer.d.ts +5 -7
  39. package/esm/MultiDensityRenderer/MultiDensityRenderer.js +6 -24
  40. package/esm/MultiDensityRenderer/configSchema.d.ts +3 -3
  41. package/esm/MultiDensityRenderer/configSchema.js +1 -1
  42. package/esm/MultiDensityRenderer/index.js +4 -4
  43. package/esm/MultiDensityRenderer/makeImageData.d.ts +3 -0
  44. package/esm/MultiDensityRenderer/makeImageData.js +7 -0
  45. package/esm/MultiDensityRenderer/renderMultiDensity.d.ts +3 -0
  46. package/esm/MultiDensityRenderer/renderMultiDensity.js +37 -0
  47. package/esm/MultiLineRenderer/MultiLineRenderer.d.ts +5 -7
  48. package/esm/MultiLineRenderer/MultiLineRenderer.js +6 -17
  49. package/esm/MultiLineRenderer/configSchema.d.ts +5 -5
  50. package/esm/MultiLineRenderer/configSchema.js +2 -2
  51. package/esm/MultiLineRenderer/index.js +4 -4
  52. package/esm/MultiLineRenderer/makeImageData.d.ts +3 -0
  53. package/esm/MultiLineRenderer/makeImageData.js +7 -0
  54. package/esm/MultiLineRenderer/renderMultiLine.d.ts +3 -0
  55. package/esm/MultiLineRenderer/renderMultiLine.js +34 -0
  56. package/esm/MultiLinearWiggleDisplay/components/ColorLegend.d.ts +2 -2
  57. package/esm/MultiLinearWiggleDisplay/components/ColorLegend.js +11 -5
  58. package/esm/MultiLinearWiggleDisplay/components/FullHeightScaleBar.d.ts +1 -1
  59. package/esm/MultiLinearWiggleDisplay/components/FullHeightScaleBar.js +4 -4
  60. package/esm/MultiLinearWiggleDisplay/components/IndividualScaleBars.d.ts +1 -1
  61. package/esm/MultiLinearWiggleDisplay/components/IndividualScaleBars.js +5 -5
  62. package/esm/MultiLinearWiggleDisplay/components/LegendItem.d.ts +3 -3
  63. package/esm/MultiLinearWiggleDisplay/components/LegendItem.js +2 -4
  64. package/esm/MultiLinearWiggleDisplay/components/LegendItemText.d.ts +12 -0
  65. package/esm/MultiLinearWiggleDisplay/components/LegendItemText.js +11 -0
  66. package/esm/MultiLinearWiggleDisplay/components/RectBg.d.ts +1 -1
  67. package/esm/MultiLinearWiggleDisplay/components/RectBg.js +4 -3
  68. package/esm/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts +2 -2
  69. package/esm/MultiLinearWiggleDisplay/components/ScoreLegend.js +3 -3
  70. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +1 -1
  71. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js +4 -34
  72. package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts +1 -1
  73. package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.js +3 -3
  74. package/esm/MultiLinearWiggleDisplay/components/Tooltip.d.ts +2 -4
  75. package/esm/MultiLinearWiggleDisplay/components/Tooltip.js +15 -12
  76. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialog.d.ts +1 -1
  77. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialog.js +3 -3
  78. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogAuto.d.ts +1 -1
  79. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogAuto.js +13 -6
  80. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogManual.d.ts +1 -1
  81. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogManual.js +24 -21
  82. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/types.d.ts +2 -1
  83. package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  84. package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js +2 -2
  85. package/esm/MultiLinearWiggleDisplay/components/YScaleBars.d.ts +2 -2
  86. package/esm/MultiLinearWiggleDisplay/components/YScaleBars.js +5 -16
  87. package/esm/MultiLinearWiggleDisplay/components/YScaleBarsWrapper.d.ts +7 -0
  88. package/esm/MultiLinearWiggleDisplay/components/YScaleBarsWrapper.js +15 -0
  89. package/esm/MultiLinearWiggleDisplay/components/types.d.ts +10 -0
  90. package/esm/MultiLinearWiggleDisplay/components/types.js +1 -0
  91. package/esm/MultiLinearWiggleDisplay/components/ui/SetColorDialog.d.ts +31 -0
  92. package/esm/MultiLinearWiggleDisplay/components/ui/SetColorDialog.js +45 -0
  93. package/esm/MultiLinearWiggleDisplay/components/ui/SetColorDialogBulkEditPanel.d.ts +10 -0
  94. package/esm/MultiLinearWiggleDisplay/components/ui/SetColorDialogBulkEditPanel.js +81 -0
  95. package/esm/MultiLinearWiggleDisplay/components/ui/SetColorDialogHelpfulTips.d.ts +1 -0
  96. package/esm/MultiLinearWiggleDisplay/components/ui/SetColorDialogHelpfulTips.js +4 -0
  97. package/esm/MultiLinearWiggleDisplay/components/ui/SetColorDialogRowPalettizer.d.ts +10 -0
  98. package/esm/MultiLinearWiggleDisplay/components/ui/SetColorDialogRowPalettizer.js +39 -0
  99. package/esm/MultiLinearWiggleDisplay/components/util.d.ts +5 -9
  100. package/esm/MultiLinearWiggleDisplay/configSchema.d.ts +9 -9
  101. package/esm/MultiLinearWiggleDisplay/configSchema.js +2 -2
  102. package/esm/MultiLinearWiggleDisplay/index.js +3 -3
  103. package/esm/MultiLinearWiggleDisplay/model.d.ts +3628 -93
  104. package/esm/MultiLinearWiggleDisplay/model.js +80 -50
  105. package/esm/MultiLinearWiggleDisplay/renderSvg.d.ts +1 -1
  106. package/esm/MultiLinearWiggleDisplay/renderSvg.js +3 -2
  107. package/esm/MultiLinearWiggleDisplay/types.d.ts +1 -0
  108. package/esm/MultiLinearWiggleDisplay/util.d.ts +0 -1
  109. package/esm/MultiLinearWiggleDisplay/util.js +1 -7
  110. package/esm/MultiQuantitativeTrack/configSchema.d.ts +16 -11
  111. package/esm/MultiQuantitativeTrack/index.js +13 -2
  112. package/esm/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +5 -7
  113. package/esm/MultiRowLineRenderer/MultiRowLineRenderer.js +6 -29
  114. package/esm/MultiRowLineRenderer/configSchema.d.ts +5 -5
  115. package/esm/MultiRowLineRenderer/configSchema.js +2 -2
  116. package/esm/MultiRowLineRenderer/index.js +4 -4
  117. package/esm/MultiRowLineRenderer/makeImageData.d.ts +3 -0
  118. package/esm/MultiRowLineRenderer/makeImageData.js +7 -0
  119. package/esm/MultiRowLineRenderer/renderMultiRowLine.d.ts +3 -0
  120. package/esm/MultiRowLineRenderer/renderMultiRowLine.js +44 -0
  121. package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +5 -7
  122. package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +6 -29
  123. package/esm/MultiRowXYPlotRenderer/configSchema.d.ts +5 -5
  124. package/esm/MultiRowXYPlotRenderer/configSchema.js +2 -2
  125. package/esm/MultiRowXYPlotRenderer/index.js +4 -4
  126. package/esm/MultiRowXYPlotRenderer/makeImageData.d.ts +3 -0
  127. package/esm/MultiRowXYPlotRenderer/makeImageData.js +7 -0
  128. package/esm/MultiRowXYPlotRenderer/renderMultiRowXYPlot.d.ts +3 -0
  129. package/esm/MultiRowXYPlotRenderer/renderMultiRowXYPlot.js +42 -0
  130. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +7 -1
  131. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js +81 -26
  132. package/esm/MultiWiggleAdapter/configSchema.d.ts +2 -2
  133. package/esm/MultiWiggleAdapter/index.js +2 -2
  134. package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.d.ts +1 -1
  135. package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +4 -5
  136. package/esm/MultiWiggleAddTrackWorkflow/index.js +2 -2
  137. package/esm/MultiWiggleRendering.d.ts +7 -7
  138. package/esm/MultiWiggleRendering.js +9 -7
  139. package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +5 -7
  140. package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.js +6 -20
  141. package/esm/MultiXYPlotRenderer/configSchema.d.ts +5 -5
  142. package/esm/MultiXYPlotRenderer/configSchema.js +2 -2
  143. package/esm/MultiXYPlotRenderer/index.js +4 -4
  144. package/esm/MultiXYPlotRenderer/makeImageData.d.ts +3 -0
  145. package/esm/MultiXYPlotRenderer/makeImageData.js +7 -0
  146. package/esm/MultiXYPlotRenderer/renderMultiXYPlot.d.ts +3 -0
  147. package/esm/MultiXYPlotRenderer/renderMultiXYPlot.js +35 -0
  148. package/esm/QuantitativeTrack/configSchema.d.ts +16 -11
  149. package/esm/QuantitativeTrack/index.js +13 -2
  150. package/esm/SVGErrorBox.d.ts +5 -0
  151. package/esm/SVGErrorBox.js +4 -0
  152. package/esm/Tooltip.d.ts +1 -3
  153. package/esm/Tooltip.js +7 -7
  154. package/esm/WiggleRPC/MultiWiggleClusterScoreMatrix.d.ts +2 -10
  155. package/esm/WiggleRPC/MultiWiggleClusterScoreMatrix.js +3 -15
  156. package/esm/WiggleRPC/MultiWiggleGetScoreMatrix.d.ts +1 -1
  157. package/esm/WiggleRPC/MultiWiggleGetScoreMatrix.js +2 -5
  158. package/esm/WiggleRPC/MultiWiggleGetSources.js +1 -4
  159. package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +1 -4
  160. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +10 -0
  161. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +26 -5
  162. package/esm/WiggleRPC/executeClusterScoreMatrix.d.ts +6 -0
  163. package/esm/WiggleRPC/executeClusterScoreMatrix.js +15 -0
  164. package/esm/WiggleRPC/getScoreMatrix.d.ts +1 -1
  165. package/esm/WiggleRPC/getScoreMatrix.js +9 -6
  166. package/esm/WiggleRPC/rpcMethods.d.ts +5 -5
  167. package/esm/WiggleRPC/rpcMethods.js +5 -5
  168. package/esm/WiggleRPC/types.d.ts +1 -1
  169. package/esm/WiggleRendering.d.ts +2 -3
  170. package/esm/WiggleRendering.js +16 -3
  171. package/esm/XYPlotRenderer/XYPlotRenderer.d.ts +5 -6
  172. package/esm/XYPlotRenderer/XYPlotRenderer.js +6 -20
  173. package/esm/XYPlotRenderer/configSchema.d.ts +5 -5
  174. package/esm/XYPlotRenderer/configSchema.js +2 -2
  175. package/esm/XYPlotRenderer/index.d.ts +3 -3
  176. package/esm/XYPlotRenderer/index.js +14 -12
  177. package/esm/XYPlotRenderer/makeImageData.d.ts +3 -0
  178. package/esm/XYPlotRenderer/makeImageData.js +13 -0
  179. package/esm/XYPlotRenderer/renderXYPlot.d.ts +3 -0
  180. package/esm/XYPlotRenderer/renderXYPlot.js +23 -0
  181. package/esm/configSchema.d.ts +3 -3
  182. package/esm/configSchema.js +1 -1
  183. package/esm/drawDensity.d.ts +4 -2
  184. package/esm/drawDensity.js +25 -15
  185. package/esm/drawLine.d.ts +5 -3
  186. package/esm/drawLine.js +118 -41
  187. package/esm/drawXY.d.ts +4 -2
  188. package/esm/drawXY.js +75 -36
  189. package/esm/getMultiWiggleSourcesAutorun.d.ts +4 -2
  190. package/esm/getMultiWiggleSourcesAutorun.js +7 -2
  191. package/esm/getQuantitativeStats.d.ts +4 -2
  192. package/esm/getQuantitativeStats.js +18 -7
  193. package/esm/getQuantitativeStatsAutorun.d.ts +3 -2
  194. package/esm/getQuantitativeStatsAutorun.js +3 -3
  195. package/esm/index.d.ts +15 -19
  196. package/esm/index.js +31 -37
  197. package/esm/multiRendererHelper.d.ts +7 -0
  198. package/esm/multiRendererHelper.js +12 -0
  199. package/esm/saveTrackFormats/bedGraph.d.ts +4 -0
  200. package/esm/saveTrackFormats/bedGraph.js +11 -0
  201. package/esm/shared/SharedWiggleConfigSchema.d.ts +5 -5
  202. package/esm/shared/SharedWiggleConfigSchema.js +1 -1
  203. package/esm/shared/SharedWiggleMixin.d.ts +1083 -120
  204. package/esm/shared/SharedWiggleMixin.js +48 -26
  205. package/esm/shared/YScaleBar.d.ts +1 -1
  206. package/esm/shared/YScaleBar.js +16 -4
  207. package/esm/shared/axisPropsFromTickScale.d.ts +7 -0
  208. package/esm/shared/axisPropsFromTickScale.js +12 -0
  209. package/esm/svgExportUtil.d.ts +9 -0
  210. package/esm/svgExportUtil.js +6 -0
  211. package/esm/types.d.ts +24 -0
  212. package/esm/types.js +1 -0
  213. package/esm/util.d.ts +35 -1
  214. package/esm/util.js +61 -2
  215. package/package.json +35 -38
  216. package/dist/BigWigAdapter/BigWigAdapter.d.ts +0 -25
  217. package/dist/BigWigAdapter/BigWigAdapter.js +0 -81
  218. package/dist/BigWigAdapter/configSchema.d.ts +0 -20
  219. package/dist/BigWigAdapter/configSchema.js +0 -37
  220. package/dist/BigWigAdapter/index.d.ts +0 -2
  221. package/dist/BigWigAdapter/index.js +0 -54
  222. package/dist/CreateMultiWiggleExtension/ConfirmDialog.d.ts +0 -8
  223. package/dist/CreateMultiWiggleExtension/ConfirmDialog.js +0 -26
  224. package/dist/CreateMultiWiggleExtension/index.d.ts +0 -2
  225. package/dist/CreateMultiWiggleExtension/index.js +0 -95
  226. package/dist/DensityRenderer/DensityRenderer.d.ts +0 -7
  227. package/dist/DensityRenderer/DensityRenderer.js +0 -46
  228. package/dist/DensityRenderer/configSchema.d.ts +0 -37
  229. package/dist/DensityRenderer/configSchema.js +0 -13
  230. package/dist/DensityRenderer/index.d.ts +0 -2
  231. package/dist/DensityRenderer/index.js +0 -17
  232. package/dist/GuessAdapter/index.d.ts +0 -2
  233. package/dist/GuessAdapter/index.js +0 -25
  234. package/dist/LinePlotRenderer/LinePlotRenderer.d.ts +0 -8
  235. package/dist/LinePlotRenderer/LinePlotRenderer.js +0 -56
  236. package/dist/LinePlotRenderer/configSchema.d.ts +0 -43
  237. package/dist/LinePlotRenderer/configSchema.js +0 -19
  238. package/dist/LinePlotRenderer/index.d.ts +0 -2
  239. package/dist/LinePlotRenderer/index.js +0 -17
  240. package/dist/LinearWiggleDisplay/components/SetColorDialog.d.ts +0 -12
  241. package/dist/LinearWiggleDisplay/components/SetColorDialog.js +0 -31
  242. package/dist/LinearWiggleDisplay/components/Tooltip.d.ts +0 -15
  243. package/dist/LinearWiggleDisplay/components/Tooltip.js +0 -32
  244. package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +0 -5
  245. package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js +0 -28
  246. package/dist/LinearWiggleDisplay/configSchema.d.ts +0 -78
  247. package/dist/LinearWiggleDisplay/configSchema.js +0 -29
  248. package/dist/LinearWiggleDisplay/index.d.ts +0 -5
  249. package/dist/LinearWiggleDisplay/index.js +0 -65
  250. package/dist/LinearWiggleDisplay/model.d.ts +0 -419
  251. package/dist/LinearWiggleDisplay/model.js +0 -262
  252. package/dist/LinearWiggleDisplay/renderSvg.d.ts +0 -3
  253. package/dist/LinearWiggleDisplay/renderSvg.js +0 -16
  254. package/dist/MultiDensityRenderer/MultiDensityRenderer.d.ts +0 -8
  255. package/dist/MultiDensityRenderer/MultiDensityRenderer.js +0 -65
  256. package/dist/MultiDensityRenderer/configSchema.d.ts +0 -37
  257. package/dist/MultiDensityRenderer/configSchema.js +0 -13
  258. package/dist/MultiDensityRenderer/index.d.ts +0 -2
  259. package/dist/MultiDensityRenderer/index.js +0 -17
  260. package/dist/MultiLineRenderer/MultiLineRenderer.d.ts +0 -8
  261. package/dist/MultiLineRenderer/MultiLineRenderer.js +0 -58
  262. package/dist/MultiLineRenderer/configSchema.d.ts +0 -49
  263. package/dist/MultiLineRenderer/configSchema.js +0 -26
  264. package/dist/MultiLineRenderer/index.d.ts +0 -2
  265. package/dist/MultiLineRenderer/index.js +0 -17
  266. package/dist/MultiLinearWiggleDisplay/components/ColorLegend.d.ts +0 -7
  267. package/dist/MultiLinearWiggleDisplay/components/ColorLegend.js +0 -18
  268. package/dist/MultiLinearWiggleDisplay/components/FullHeightScaleBar.d.ts +0 -7
  269. package/dist/MultiLinearWiggleDisplay/components/FullHeightScaleBar.js +0 -17
  270. package/dist/MultiLinearWiggleDisplay/components/IndividualScaleBars.d.ts +0 -7
  271. package/dist/MultiLinearWiggleDisplay/components/IndividualScaleBars.js +0 -15
  272. package/dist/MultiLinearWiggleDisplay/components/LegendItem.d.ts +0 -11
  273. package/dist/MultiLinearWiggleDisplay/components/LegendItem.js +0 -19
  274. package/dist/MultiLinearWiggleDisplay/components/RectBg.d.ts +0 -8
  275. package/dist/MultiLinearWiggleDisplay/components/RectBg.js +0 -9
  276. package/dist/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts +0 -5
  277. package/dist/MultiLinearWiggleDisplay/components/ScoreLegend.js +0 -19
  278. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +0 -9
  279. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js +0 -42
  280. package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts +0 -7
  281. package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.js +0 -130
  282. package/dist/MultiLinearWiggleDisplay/components/Tooltip.d.ts +0 -18
  283. package/dist/MultiLinearWiggleDisplay/components/Tooltip.js +0 -35
  284. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialog.d.ts +0 -6
  285. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialog.js +0 -29
  286. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogAuto.d.ts +0 -7
  287. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogAuto.js +0 -79
  288. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogManual.d.ts +0 -7
  289. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogManual.js +0 -145
  290. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/types.d.ts +0 -7
  291. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/types.js +0 -2
  292. package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +0 -5
  293. package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js +0 -14
  294. package/dist/MultiLinearWiggleDisplay/components/YScaleBars.d.ts +0 -7
  295. package/dist/MultiLinearWiggleDisplay/components/YScaleBars.js +0 -28
  296. package/dist/MultiLinearWiggleDisplay/components/util.d.ts +0 -13
  297. package/dist/MultiLinearWiggleDisplay/components/util.js +0 -45
  298. package/dist/MultiLinearWiggleDisplay/configSchema.d.ts +0 -84
  299. package/dist/MultiLinearWiggleDisplay/configSchema.js +0 -44
  300. package/dist/MultiLinearWiggleDisplay/index.d.ts +0 -2
  301. package/dist/MultiLinearWiggleDisplay/index.js +0 -57
  302. package/dist/MultiLinearWiggleDisplay/model.d.ts +0 -436
  303. package/dist/MultiLinearWiggleDisplay/model.js +0 -413
  304. package/dist/MultiLinearWiggleDisplay/renderSvg.d.ts +0 -3
  305. package/dist/MultiLinearWiggleDisplay/renderSvg.js +0 -15
  306. package/dist/MultiLinearWiggleDisplay/types.d.ts +0 -14
  307. package/dist/MultiLinearWiggleDisplay/types.js +0 -2
  308. package/dist/MultiLinearWiggleDisplay/util.d.ts +0 -1
  309. package/dist/MultiLinearWiggleDisplay/util.js +0 -10
  310. package/dist/MultiQuantitativeTrack/configSchema.d.ts +0 -80
  311. package/dist/MultiQuantitativeTrack/configSchema.js +0 -11
  312. package/dist/MultiQuantitativeTrack/index.d.ts +0 -2
  313. package/dist/MultiQuantitativeTrack/index.js +0 -20
  314. package/dist/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +0 -8
  315. package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js +0 -70
  316. package/dist/MultiRowLineRenderer/configSchema.d.ts +0 -49
  317. package/dist/MultiRowLineRenderer/configSchema.js +0 -26
  318. package/dist/MultiRowLineRenderer/index.d.ts +0 -2
  319. package/dist/MultiRowLineRenderer/index.js +0 -17
  320. package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +0 -8
  321. package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +0 -70
  322. package/dist/MultiRowXYPlotRenderer/configSchema.d.ts +0 -57
  323. package/dist/MultiRowXYPlotRenderer/configSchema.js +0 -34
  324. package/dist/MultiRowXYPlotRenderer/index.d.ts +0 -2
  325. package/dist/MultiRowXYPlotRenderer/index.js +0 -17
  326. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +0 -30
  327. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js +0 -85
  328. package/dist/MultiWiggleAdapter/configSchema.d.ts +0 -13
  329. package/dist/MultiWiggleAdapter/configSchema.js +0 -17
  330. package/dist/MultiWiggleAdapter/index.d.ts +0 -2
  331. package/dist/MultiWiggleAdapter/index.js +0 -57
  332. package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.d.ts +0 -5
  333. package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +0 -89
  334. package/dist/MultiWiggleAddTrackWorkflow/index.d.ts +0 -2
  335. package/dist/MultiWiggleAddTrackWorkflow/index.js +0 -46
  336. package/dist/MultiWiggleRendering.d.ts +0 -19
  337. package/dist/MultiWiggleRendering.js +0 -81
  338. package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +0 -8
  339. package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js +0 -61
  340. package/dist/MultiXYPlotRenderer/configSchema.d.ts +0 -57
  341. package/dist/MultiXYPlotRenderer/configSchema.js +0 -34
  342. package/dist/MultiXYPlotRenderer/index.d.ts +0 -2
  343. package/dist/MultiXYPlotRenderer/index.js +0 -17
  344. package/dist/QuantitativeTrack/configSchema.d.ts +0 -80
  345. package/dist/QuantitativeTrack/configSchema.js +0 -11
  346. package/dist/QuantitativeTrack/index.d.ts +0 -2
  347. package/dist/QuantitativeTrack/index.js +0 -20
  348. package/dist/Tooltip.d.ts +0 -18
  349. package/dist/Tooltip.js +0 -34
  350. package/dist/WiggleBaseRenderer.d.ts +0 -57
  351. package/dist/WiggleBaseRenderer.js +0 -42
  352. package/dist/WiggleRPC/MultiWiggleClusterScoreMatrix.d.ts +0 -14
  353. package/dist/WiggleRPC/MultiWiggleClusterScoreMatrix.js +0 -31
  354. package/dist/WiggleRPC/MultiWiggleGetScoreMatrix.d.ts +0 -6
  355. package/dist/WiggleRPC/MultiWiggleGetScoreMatrix.js +0 -22
  356. package/dist/WiggleRPC/MultiWiggleGetSources.d.ts +0 -14
  357. package/dist/WiggleRPC/MultiWiggleGetSources.js +0 -22
  358. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.d.ts +0 -12
  359. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +0 -22
  360. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +0 -13
  361. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +0 -22
  362. package/dist/WiggleRPC/getScoreMatrix.d.ts +0 -6
  363. package/dist/WiggleRPC/getScoreMatrix.js +0 -35
  364. package/dist/WiggleRPC/rpcMethods.d.ts +0 -5
  365. package/dist/WiggleRPC/rpcMethods.js +0 -21
  366. package/dist/WiggleRPC/type.d.ts +0 -0
  367. package/dist/WiggleRPC/type.js +0 -1
  368. package/dist/WiggleRPC/types.d.ts +0 -13
  369. package/dist/WiggleRPC/types.js +0 -2
  370. package/dist/WiggleRendering.d.ts +0 -14
  371. package/dist/WiggleRendering.js +0 -35
  372. package/dist/XYPlotRenderer/XYPlotRenderer.d.ts +0 -7
  373. package/dist/XYPlotRenderer/XYPlotRenderer.js +0 -61
  374. package/dist/XYPlotRenderer/configSchema.d.ts +0 -57
  375. package/dist/XYPlotRenderer/configSchema.js +0 -34
  376. package/dist/XYPlotRenderer/index.d.ts +0 -5
  377. package/dist/XYPlotRenderer/index.js +0 -24
  378. package/dist/configSchema.d.ts +0 -37
  379. package/dist/configSchema.js +0 -47
  380. package/dist/drawDensity.d.ts +0 -18
  381. package/dist/drawDensity.js +0 -81
  382. package/dist/drawLine.d.ts +0 -20
  383. package/dist/drawLine.js +0 -77
  384. package/dist/drawXY.d.ts +0 -21
  385. package/dist/drawXY.js +0 -191
  386. package/dist/getMultiWiggleSourcesAutorun.d.ts +0 -17
  387. package/dist/getMultiWiggleSourcesAutorun.js +0 -38
  388. package/dist/getQuantitativeStats.d.ts +0 -13
  389. package/dist/getQuantitativeStats.js +0 -70
  390. package/dist/getQuantitativeStatsAutorun.d.ts +0 -13
  391. package/dist/getQuantitativeStatsAutorun.js +0 -35
  392. package/dist/index.d.ts +0 -91
  393. package/dist/index.js +0 -112
  394. package/dist/shared/SetMinMaxDialog.d.ts +0 -10
  395. package/dist/shared/SetMinMaxDialog.js +0 -26
  396. package/dist/shared/SharedWiggleConfigSchema.d.ts +0 -66
  397. package/dist/shared/SharedWiggleConfigSchema.js +0 -56
  398. package/dist/shared/SharedWiggleMixin.d.ts +0 -405
  399. package/dist/shared/SharedWiggleMixin.js +0 -343
  400. package/dist/shared/YScaleBar.d.ts +0 -9
  401. package/dist/shared/YScaleBar.js +0 -12
  402. package/dist/util.d.ts +0 -24
  403. package/dist/util.js +0 -105
  404. package/esm/WiggleBaseRenderer.d.ts +0 -57
  405. package/esm/WiggleBaseRenderer.js +0 -36
  406. package/esm/WiggleRPC/type.d.ts +0 -0
  407. package/esm/WiggleRPC/type.js +0 -1
@@ -1,32 +1,33 @@
1
- import type { Source } from '../util';
1
+ import type { Source } from '../util.ts';
2
2
  import type PluginManager from '@jbrowse/core/PluginManager';
3
3
  import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
4
4
  import type { AnyReactComponentType, Feature } from '@jbrowse/core/util';
5
+ import type { StopToken } from '@jbrowse/core/util/stopToken';
6
+ import type { Instance } from '@jbrowse/mobx-state-tree';
5
7
  import type { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
6
- import type { Instance } from 'mobx-state-tree';
7
- export declare function stateModelFactory(_pluginManager: PluginManager, configSchema: AnyConfigurationSchemaType): import("mobx-state-tree").IModelType<{
8
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
9
- type: import("mobx-state-tree").ISimpleType<string>;
10
- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
11
- } & {
12
- heightPreConfig: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
13
- } & {
14
- userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
15
- userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
16
- } & {
17
- blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
18
- key: import("mobx-state-tree").ISimpleType<string>;
19
- region: import("mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
20
- reloadFlag: import("mobx-state-tree").IType<number | undefined, number, number>;
21
- isLeftEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
22
- isRightEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
8
+ export declare function stateModelFactory(_pluginManager: PluginManager, configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<{
9
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
10
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
11
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
12
+ } & {
13
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
14
+ } & {
15
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
16
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
17
+ } & {
18
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
19
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
20
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
21
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
22
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
23
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
23
24
  }, {
24
- stopToken: string | undefined;
25
+ stopToken: StopToken | undefined;
25
26
  filled: boolean;
26
27
  reactElement: React.ReactElement | undefined;
27
28
  features: Map<string, Feature> | undefined;
28
29
  layout: any;
29
- status: string;
30
+ blockStatusMessage: string;
30
31
  error: unknown;
31
32
  message: string | undefined;
32
33
  maxHeightReached: boolean;
@@ -34,25 +35,32 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
34
35
  model: {
35
36
  error?: unknown;
36
37
  reload: () => void;
37
- message: React.ReactNode;
38
- filled?: boolean;
39
- status?: string;
38
+ message?: React.ReactNode;
39
+ statusMessage?: string;
40
40
  reactElement?: React.ReactElement;
41
+ isRenderingPending?: boolean;
41
42
  };
42
- }) => import("react/jsx-runtime").JSX.Element | undefined;
43
+ }) => import("react/jsx-runtime").JSX.Element;
43
44
  renderProps: any;
45
+ renderArgs: Record<string, unknown> | undefined;
46
+ isRenderingPending: boolean;
47
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
44
48
  } & {
45
49
  doReload(): void;
46
- afterAttach(): void;
47
- setStatus(message: string): void;
48
- setLoading(newStopToken: string): void;
50
+ setStatusMessage(message: string): void;
51
+ setLoading(newStopToken: StopToken): void;
49
52
  setMessage(messageText: string): void;
50
- setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
53
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
51
54
  setError(error: unknown): void;
52
55
  reload(): void;
56
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
53
57
  beforeDestroy(): void;
54
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
55
- configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
58
+ } & {
59
+ readonly statusMessage: any;
60
+ } & {
61
+ afterAttach(): void;
62
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
63
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
56
64
  maxFeatureScreenDensity: {
57
65
  type: string;
58
66
  description: string;
@@ -79,52 +87,54 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
79
87
  description: string;
80
88
  defaultValue: never[];
81
89
  };
82
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
83
- } & {
84
- selectedRendering: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
85
- resolution: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
86
- fill: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<boolean>>;
87
- minSize: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
88
- color: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
89
- posColor: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
90
- negColor: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
91
- summaryScoreMode: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
92
- rendererTypeNameState: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
93
- scale: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
94
- autoscale: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
95
- displayCrossHatches: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<boolean>>;
96
- constraints: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
97
- max: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
98
- min: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
99
- }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
90
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
91
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
92
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
93
+ } & {
94
+ selectedRendering: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
95
+ resolution: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<number>, [undefined]>;
96
+ fill: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
97
+ minSize: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
98
+ color: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
99
+ posColor: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
100
+ negColor: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
101
+ summaryScoreMode: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
102
+ rendererTypeNameState: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
103
+ scale: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
104
+ autoscale: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
105
+ displayCrossHatches: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
106
+ constraints: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").IModelType<{
107
+ max: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
108
+ min: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
109
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>, [undefined]>;
100
110
  configuration: AnyConfigurationSchemaType;
101
111
  } & {
102
- type: import("mobx-state-tree").ISimpleType<"MultiLinearWiggleDisplay">;
103
- layout: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IType<Source[], Source[], Source[]>, [undefined]>;
104
- showSidebar: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
112
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<"MultiLinearWiggleDisplay">;
113
+ layout: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").IType<Source[], Source[], Source[]>, [undefined]>;
114
+ showSidebar: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
105
115
  }, {
106
116
  rendererTypeName: string;
107
117
  error: unknown;
108
- message: string | undefined;
118
+ statusMessage: string | undefined;
109
119
  } & {
110
120
  readonly RenderingComponent: React.FC<{
111
121
  model: {
112
122
  id: string;
113
123
  type: string;
114
124
  rpcDriverName: string | undefined;
115
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
125
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
116
126
  rendererTypeName: string;
117
127
  error: unknown;
118
- message: string | undefined;
119
- } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
120
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
121
- type: import("mobx-state-tree").ISimpleType<string>;
122
- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
128
+ statusMessage: string | undefined;
129
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
130
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
131
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
132
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
123
133
  }, {
124
134
  rendererTypeName: string;
125
135
  error: unknown;
126
- message: string | undefined;
127
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
136
+ statusMessage: string | undefined;
137
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
128
138
  onHorizontalScroll?: () => void;
129
139
  blockState?: Record<string, any>;
130
140
  }>;
@@ -133,30 +143,142 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
133
143
  id: string;
134
144
  type: string;
135
145
  rpcDriverName: string | undefined;
136
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
146
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
137
147
  rendererTypeName: string;
138
148
  error: unknown;
139
- message: string | undefined;
140
- } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
141
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
142
- type: import("mobx-state-tree").ISimpleType<string>;
143
- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
149
+ statusMessage: string | undefined;
150
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
151
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
152
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
153
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
144
154
  }, {
145
155
  rendererTypeName: string;
146
156
  error: unknown;
147
- message: string | undefined;
148
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
157
+ statusMessage: string | undefined;
158
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
149
159
  }> | null;
150
160
  readonly adapterConfig: any;
151
- readonly parentTrack: any;
161
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
162
+ readonly parentDisplay: any;
163
+ readonly effectiveRpcDriverName: any;
164
+ } & {
152
165
  renderProps(): any;
166
+ renderingProps(): {
167
+ displayModel: {
168
+ id: string;
169
+ type: string;
170
+ rpcDriverName: string | undefined;
171
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
172
+ rendererTypeName: string;
173
+ error: unknown;
174
+ statusMessage: string | undefined;
175
+ } & {
176
+ readonly RenderingComponent: React.FC<{
177
+ model: {
178
+ id: string;
179
+ type: string;
180
+ rpcDriverName: string | undefined;
181
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
182
+ rendererTypeName: string;
183
+ error: unknown;
184
+ statusMessage: string | undefined;
185
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
186
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
187
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
188
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
189
+ }, {
190
+ rendererTypeName: string;
191
+ error: unknown;
192
+ statusMessage: string | undefined;
193
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
194
+ onHorizontalScroll?: () => void;
195
+ blockState?: Record<string, any>;
196
+ }>;
197
+ readonly DisplayBlurb: React.FC<{
198
+ model: {
199
+ id: string;
200
+ type: string;
201
+ rpcDriverName: string | undefined;
202
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
203
+ rendererTypeName: string;
204
+ error: unknown;
205
+ statusMessage: string | undefined;
206
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
207
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
208
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
209
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
210
+ }, {
211
+ rendererTypeName: string;
212
+ error: unknown;
213
+ statusMessage: string | undefined;
214
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
215
+ }> | null;
216
+ readonly adapterConfig: any;
217
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
218
+ readonly parentDisplay: any;
219
+ readonly effectiveRpcDriverName: any;
220
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
221
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
222
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
223
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
224
+ }, {
225
+ rendererTypeName: string;
226
+ error: unknown;
227
+ statusMessage: string | undefined;
228
+ } & {
229
+ readonly RenderingComponent: React.FC<{
230
+ model: {
231
+ id: string;
232
+ type: string;
233
+ rpcDriverName: string | undefined;
234
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
235
+ rendererTypeName: string;
236
+ error: unknown;
237
+ statusMessage: string | undefined;
238
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
239
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
240
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
241
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
242
+ }, {
243
+ rendererTypeName: string;
244
+ error: unknown;
245
+ statusMessage: string | undefined;
246
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
247
+ onHorizontalScroll?: () => void;
248
+ blockState?: Record<string, any>;
249
+ }>;
250
+ readonly DisplayBlurb: React.FC<{
251
+ model: {
252
+ id: string;
253
+ type: string;
254
+ rpcDriverName: string | undefined;
255
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
256
+ rendererTypeName: string;
257
+ error: unknown;
258
+ statusMessage: string | undefined;
259
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
260
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
261
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
262
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
263
+ }, {
264
+ rendererTypeName: string;
265
+ error: unknown;
266
+ statusMessage: string | undefined;
267
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
268
+ }> | null;
269
+ readonly adapterConfig: any;
270
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
271
+ readonly parentDisplay: any;
272
+ readonly effectiveRpcDriverName: any;
273
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
274
+ };
153
275
  readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
154
276
  readonly DisplayMessageComponent: undefined | React.FC<any>;
155
277
  trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
156
278
  readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
157
279
  regionCannotBeRendered(): null;
158
280
  } & {
159
- setMessage(arg?: string): void;
281
+ setStatusMessage(arg?: string): void;
160
282
  setError(error?: unknown): void;
161
283
  setRpcDriverName(rpcDriverName: string): void;
162
284
  reload(): void;
@@ -191,11 +313,13 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
191
313
  readonly regionTooLarge: boolean;
192
314
  readonly regionTooLargeReason: string;
193
315
  } & {
194
- readonly statsReadyAndRegionNotTooLarge: boolean;
316
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
195
317
  regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
196
318
  regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
197
319
  } & {
320
+ mouseoverExtraInformation: string | undefined;
198
321
  featureIdUnderMouse: undefined | string;
322
+ subfeatureIdUnderMouse: undefined | string;
199
323
  contextMenuFeature: undefined | Feature;
200
324
  } & {
201
325
  readonly DisplayMessageComponent: undefined | React.FC<any>;
@@ -204,14 +328,23 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
204
328
  } & {
205
329
  readonly renderDelay: number;
206
330
  readonly TooltipComponent: AnyReactComponentType;
331
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
332
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
207
333
  readonly selectedFeatureId: string | undefined;
208
- copyInfoToClipboard(feature: Feature): void;
334
+ readonly featureWidgetType: {
335
+ type: string;
336
+ id: string;
337
+ };
209
338
  } & {
339
+ readonly showTooltipsEnabled: boolean;
210
340
  readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
211
341
  readonly featureUnderMouse: Feature | undefined;
342
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
343
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord>;
212
344
  getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
213
- getFeatureByID(blockKey: string, id: string): [number, number, number, number] | undefined;
214
- searchFeatureByID(id: string): [number, number, number, number] | undefined;
345
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
346
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
347
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util.ts").FeatureLabelData>;
215
348
  } & {
216
349
  addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
217
350
  deleteBlock(key: string): void;
@@ -219,12 +352,746 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
219
352
  navToFeature(feature: Feature): void;
220
353
  clearFeatureSelection(): void;
221
354
  setFeatureIdUnderMouse(feature?: string): void;
355
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
222
356
  setContextMenuFeature(feature?: Feature): void;
357
+ setMouseoverExtraInformation(extra?: string): void;
358
+ setShowLegend(s: boolean): void;
359
+ setShowTooltips(arg: boolean): void;
223
360
  } & {
224
361
  reload(): Promise<void>;
362
+ } & {
363
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
364
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
225
365
  } & {
226
366
  trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
227
367
  contextMenuItems(): import("@jbrowse/core/ui").MenuItem[];
368
+ renderingProps(): {
369
+ displayModel: {
370
+ id: string;
371
+ type: string;
372
+ rpcDriverName: string | undefined;
373
+ heightPreConfig: number | undefined;
374
+ userBpPerPxLimit: number | undefined;
375
+ userByteSizeLimit: number | undefined;
376
+ blockState: import("@jbrowse/mobx-state-tree").IMSTMap<import("@jbrowse/mobx-state-tree").IModelType<{
377
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
378
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
379
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
380
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
381
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
382
+ }, {
383
+ stopToken: StopToken | undefined;
384
+ filled: boolean;
385
+ reactElement: React.ReactElement | undefined;
386
+ features: Map<string, Feature> | undefined;
387
+ layout: any;
388
+ blockStatusMessage: string;
389
+ error: unknown;
390
+ message: string | undefined;
391
+ maxHeightReached: boolean;
392
+ ReactComponent: ({ model, }: {
393
+ model: {
394
+ error?: unknown;
395
+ reload: () => void;
396
+ message?: React.ReactNode;
397
+ statusMessage?: string;
398
+ reactElement?: React.ReactElement;
399
+ isRenderingPending?: boolean;
400
+ };
401
+ }) => import("react/jsx-runtime").JSX.Element;
402
+ renderProps: any;
403
+ renderArgs: Record<string, unknown> | undefined;
404
+ isRenderingPending: boolean;
405
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
406
+ } & {
407
+ doReload(): void;
408
+ setStatusMessage(message: string): void;
409
+ setLoading(newStopToken: StopToken): void;
410
+ setMessage(messageText: string): void;
411
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
412
+ setError(error: unknown): void;
413
+ reload(): void;
414
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
415
+ beforeDestroy(): void;
416
+ } & {
417
+ readonly statusMessage: any;
418
+ } & {
419
+ afterAttach(): void;
420
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
421
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
422
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
423
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
424
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
425
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
426
+ }, {
427
+ stopToken: StopToken | undefined;
428
+ filled: boolean;
429
+ reactElement: React.ReactElement | undefined;
430
+ features: Map<string, Feature> | undefined;
431
+ layout: any;
432
+ blockStatusMessage: string;
433
+ error: unknown;
434
+ message: string | undefined;
435
+ maxHeightReached: boolean;
436
+ ReactComponent: ({ model, }: {
437
+ model: {
438
+ error?: unknown;
439
+ reload: () => void;
440
+ message?: React.ReactNode;
441
+ statusMessage?: string;
442
+ reactElement?: React.ReactElement;
443
+ isRenderingPending?: boolean;
444
+ };
445
+ }) => import("react/jsx-runtime").JSX.Element;
446
+ renderProps: any;
447
+ renderArgs: Record<string, unknown> | undefined;
448
+ isRenderingPending: boolean;
449
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
450
+ } & {
451
+ doReload(): void;
452
+ setStatusMessage(message: string): void;
453
+ setLoading(newStopToken: StopToken): void;
454
+ setMessage(messageText: string): void;
455
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
456
+ setError(error: unknown): void;
457
+ reload(): void;
458
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
459
+ beforeDestroy(): void;
460
+ } & {
461
+ readonly statusMessage: any;
462
+ } & {
463
+ afterAttach(): void;
464
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
465
+ configuration: {
466
+ [x: string]: any;
467
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
468
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
469
+ [x: string]: any;
470
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
471
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
472
+ [x: string]: any;
473
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
474
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
475
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
476
+ maxFeatureScreenDensity: {
477
+ type: string;
478
+ description: string;
479
+ defaultValue: number;
480
+ };
481
+ fetchSizeLimit: {
482
+ type: string;
483
+ defaultValue: number;
484
+ description: string;
485
+ };
486
+ height: {
487
+ type: string;
488
+ defaultValue: number;
489
+ description: string;
490
+ };
491
+ mouseover: {
492
+ type: string;
493
+ description: string;
494
+ defaultValue: string;
495
+ contextVariable: string[];
496
+ };
497
+ jexlFilters: {
498
+ type: string;
499
+ description: string;
500
+ defaultValue: never[];
501
+ };
502
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>>;
503
+ showLegend: boolean | undefined;
504
+ showTooltips: boolean | undefined;
505
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
506
+ rendererTypeName: string;
507
+ error: unknown;
508
+ statusMessage: string | undefined;
509
+ } & {
510
+ readonly RenderingComponent: React.FC<{
511
+ model: {
512
+ id: string;
513
+ type: string;
514
+ rpcDriverName: string | undefined;
515
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
516
+ rendererTypeName: string;
517
+ error: unknown;
518
+ statusMessage: string | undefined;
519
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
520
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
521
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
522
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
523
+ }, {
524
+ rendererTypeName: string;
525
+ error: unknown;
526
+ statusMessage: string | undefined;
527
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
528
+ onHorizontalScroll?: () => void;
529
+ blockState?: Record<string, any>;
530
+ }>;
531
+ readonly DisplayBlurb: React.FC<{
532
+ model: {
533
+ id: string;
534
+ type: string;
535
+ rpcDriverName: string | undefined;
536
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
537
+ rendererTypeName: string;
538
+ error: unknown;
539
+ statusMessage: string | undefined;
540
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
541
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
542
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
543
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
544
+ }, {
545
+ rendererTypeName: string;
546
+ error: unknown;
547
+ statusMessage: string | undefined;
548
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
549
+ }> | null;
550
+ readonly adapterConfig: any;
551
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
552
+ readonly parentDisplay: any;
553
+ readonly effectiveRpcDriverName: any;
554
+ } & {
555
+ renderProps(): any;
556
+ renderingProps(): {
557
+ displayModel: {
558
+ id: string;
559
+ type: string;
560
+ rpcDriverName: string | undefined;
561
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
562
+ rendererTypeName: string;
563
+ error: unknown;
564
+ statusMessage: string | undefined;
565
+ } & {
566
+ readonly RenderingComponent: React.FC<{
567
+ model: {
568
+ id: string;
569
+ type: string;
570
+ rpcDriverName: string | undefined;
571
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
572
+ rendererTypeName: string;
573
+ error: unknown;
574
+ statusMessage: string | undefined;
575
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
576
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
577
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
578
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
579
+ }, {
580
+ rendererTypeName: string;
581
+ error: unknown;
582
+ statusMessage: string | undefined;
583
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
584
+ onHorizontalScroll?: () => void;
585
+ blockState?: Record<string, any>;
586
+ }>;
587
+ readonly DisplayBlurb: React.FC<{
588
+ model: {
589
+ id: string;
590
+ type: string;
591
+ rpcDriverName: string | undefined;
592
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
593
+ rendererTypeName: string;
594
+ error: unknown;
595
+ statusMessage: string | undefined;
596
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
597
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
598
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
599
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
600
+ }, {
601
+ rendererTypeName: string;
602
+ error: unknown;
603
+ statusMessage: string | undefined;
604
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
605
+ }> | null;
606
+ readonly adapterConfig: any;
607
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
608
+ readonly parentDisplay: any;
609
+ readonly effectiveRpcDriverName: any;
610
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
611
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
612
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
613
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
614
+ }, {
615
+ rendererTypeName: string;
616
+ error: unknown;
617
+ statusMessage: string | undefined;
618
+ } & {
619
+ readonly RenderingComponent: React.FC<{
620
+ model: {
621
+ id: string;
622
+ type: string;
623
+ rpcDriverName: string | undefined;
624
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
625
+ rendererTypeName: string;
626
+ error: unknown;
627
+ statusMessage: string | undefined;
628
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
629
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
630
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
631
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
632
+ }, {
633
+ rendererTypeName: string;
634
+ error: unknown;
635
+ statusMessage: string | undefined;
636
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
637
+ onHorizontalScroll?: () => void;
638
+ blockState?: Record<string, any>;
639
+ }>;
640
+ readonly DisplayBlurb: React.FC<{
641
+ model: {
642
+ id: string;
643
+ type: string;
644
+ rpcDriverName: string | undefined;
645
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
646
+ rendererTypeName: string;
647
+ error: unknown;
648
+ statusMessage: string | undefined;
649
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
650
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
651
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
652
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
653
+ }, {
654
+ rendererTypeName: string;
655
+ error: unknown;
656
+ statusMessage: string | undefined;
657
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
658
+ }> | null;
659
+ readonly adapterConfig: any;
660
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
661
+ readonly parentDisplay: any;
662
+ readonly effectiveRpcDriverName: any;
663
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
664
+ };
665
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
666
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
667
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
668
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
669
+ regionCannotBeRendered(): null;
670
+ } & {
671
+ setStatusMessage(arg?: string): void;
672
+ setError(error?: unknown): void;
673
+ setRpcDriverName(rpcDriverName: string): void;
674
+ reload(): void;
675
+ } & {
676
+ scrollTop: number;
677
+ } & {
678
+ readonly height: number;
679
+ } & {
680
+ setScrollTop(scrollTop: number): void;
681
+ setHeight(displayHeight: number): number;
682
+ resizeHeight(distance: number): number;
683
+ } & {
684
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
685
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
686
+ currStatsBpPerPx: number;
687
+ } & {
688
+ readonly currentBytesRequested: number;
689
+ readonly currentFeatureScreenDensity: number;
690
+ readonly maxFeatureScreenDensity: any;
691
+ readonly featureDensityStatsReady: boolean;
692
+ readonly maxAllowableBytes: number;
693
+ } & {
694
+ afterAttach(): void;
695
+ } & {
696
+ setCurrStatsBpPerPx(n: number): void;
697
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
698
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
699
+ setFeatureDensityStatsP(arg: any): void;
700
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
701
+ clearFeatureDensityStats(): void;
702
+ } & {
703
+ readonly regionTooLarge: boolean;
704
+ readonly regionTooLargeReason: string;
705
+ } & {
706
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
707
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
708
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
709
+ } & {
710
+ mouseoverExtraInformation: string | undefined;
711
+ featureIdUnderMouse: undefined | string;
712
+ subfeatureIdUnderMouse: undefined | string;
713
+ contextMenuFeature: undefined | Feature;
714
+ } & {
715
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
716
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
717
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
718
+ } & {
719
+ readonly renderDelay: number;
720
+ readonly TooltipComponent: AnyReactComponentType;
721
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
722
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
723
+ readonly selectedFeatureId: string | undefined;
724
+ readonly featureWidgetType: {
725
+ type: string;
726
+ id: string;
727
+ };
728
+ } & {
729
+ readonly showTooltipsEnabled: boolean;
730
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
731
+ readonly featureUnderMouse: Feature | undefined;
732
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
733
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord>;
734
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
735
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
736
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
737
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util.ts").FeatureLabelData>;
738
+ } & {
739
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
740
+ deleteBlock(key: string): void;
741
+ selectFeature(feature: Feature): void;
742
+ navToFeature(feature: Feature): void;
743
+ clearFeatureSelection(): void;
744
+ setFeatureIdUnderMouse(feature?: string): void;
745
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
746
+ setContextMenuFeature(feature?: Feature): void;
747
+ setMouseoverExtraInformation(extra?: string): void;
748
+ setShowLegend(s: boolean): void;
749
+ setShowTooltips(arg: boolean): void;
750
+ } & {
751
+ reload(): Promise<void>;
752
+ } & {
753
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
754
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
755
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
756
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
757
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
758
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
759
+ } & {
760
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
761
+ } & {
762
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
763
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
764
+ } & {
765
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
766
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
767
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
768
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
769
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
770
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
771
+ }, {
772
+ stopToken: StopToken | undefined;
773
+ filled: boolean;
774
+ reactElement: React.ReactElement | undefined;
775
+ features: Map<string, Feature> | undefined;
776
+ layout: any;
777
+ blockStatusMessage: string;
778
+ error: unknown;
779
+ message: string | undefined;
780
+ maxHeightReached: boolean;
781
+ ReactComponent: ({ model, }: {
782
+ model: {
783
+ error?: unknown;
784
+ reload: () => void;
785
+ message?: React.ReactNode;
786
+ statusMessage?: string;
787
+ reactElement?: React.ReactElement;
788
+ isRenderingPending?: boolean;
789
+ };
790
+ }) => import("react/jsx-runtime").JSX.Element;
791
+ renderProps: any;
792
+ renderArgs: Record<string, unknown> | undefined;
793
+ isRenderingPending: boolean;
794
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
795
+ } & {
796
+ doReload(): void;
797
+ setStatusMessage(message: string): void;
798
+ setLoading(newStopToken: StopToken): void;
799
+ setMessage(messageText: string): void;
800
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
801
+ setError(error: unknown): void;
802
+ reload(): void;
803
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
804
+ beforeDestroy(): void;
805
+ } & {
806
+ readonly statusMessage: any;
807
+ } & {
808
+ afterAttach(): void;
809
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
810
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
811
+ maxFeatureScreenDensity: {
812
+ type: string;
813
+ description: string;
814
+ defaultValue: number;
815
+ };
816
+ fetchSizeLimit: {
817
+ type: string;
818
+ defaultValue: number;
819
+ description: string;
820
+ };
821
+ height: {
822
+ type: string;
823
+ defaultValue: number;
824
+ description: string;
825
+ };
826
+ mouseover: {
827
+ type: string;
828
+ description: string;
829
+ defaultValue: string;
830
+ contextVariable: string[];
831
+ };
832
+ jexlFilters: {
833
+ type: string;
834
+ description: string;
835
+ defaultValue: never[];
836
+ };
837
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
838
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
839
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
840
+ }, {
841
+ rendererTypeName: string;
842
+ error: unknown;
843
+ statusMessage: string | undefined;
844
+ } & {
845
+ readonly RenderingComponent: React.FC<{
846
+ model: {
847
+ id: string;
848
+ type: string;
849
+ rpcDriverName: string | undefined;
850
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
851
+ rendererTypeName: string;
852
+ error: unknown;
853
+ statusMessage: string | undefined;
854
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
855
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
856
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
857
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
858
+ }, {
859
+ rendererTypeName: string;
860
+ error: unknown;
861
+ statusMessage: string | undefined;
862
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
863
+ onHorizontalScroll?: () => void;
864
+ blockState?: Record<string, any>;
865
+ }>;
866
+ readonly DisplayBlurb: React.FC<{
867
+ model: {
868
+ id: string;
869
+ type: string;
870
+ rpcDriverName: string | undefined;
871
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
872
+ rendererTypeName: string;
873
+ error: unknown;
874
+ statusMessage: string | undefined;
875
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
876
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
877
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
878
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
879
+ }, {
880
+ rendererTypeName: string;
881
+ error: unknown;
882
+ statusMessage: string | undefined;
883
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
884
+ }> | null;
885
+ readonly adapterConfig: any;
886
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
887
+ readonly parentDisplay: any;
888
+ readonly effectiveRpcDriverName: any;
889
+ } & {
890
+ renderProps(): any;
891
+ renderingProps(): {
892
+ displayModel: {
893
+ id: string;
894
+ type: string;
895
+ rpcDriverName: string | undefined;
896
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
897
+ rendererTypeName: string;
898
+ error: unknown;
899
+ statusMessage: string | undefined;
900
+ } & {
901
+ readonly RenderingComponent: React.FC<{
902
+ model: {
903
+ id: string;
904
+ type: string;
905
+ rpcDriverName: string | undefined;
906
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
907
+ rendererTypeName: string;
908
+ error: unknown;
909
+ statusMessage: string | undefined;
910
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
911
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
912
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
913
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
914
+ }, {
915
+ rendererTypeName: string;
916
+ error: unknown;
917
+ statusMessage: string | undefined;
918
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
919
+ onHorizontalScroll?: () => void;
920
+ blockState?: Record<string, any>;
921
+ }>;
922
+ readonly DisplayBlurb: React.FC<{
923
+ model: {
924
+ id: string;
925
+ type: string;
926
+ rpcDriverName: string | undefined;
927
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
928
+ rendererTypeName: string;
929
+ error: unknown;
930
+ statusMessage: string | undefined;
931
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
932
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
933
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
934
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
935
+ }, {
936
+ rendererTypeName: string;
937
+ error: unknown;
938
+ statusMessage: string | undefined;
939
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
940
+ }> | null;
941
+ readonly adapterConfig: any;
942
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
943
+ readonly parentDisplay: any;
944
+ readonly effectiveRpcDriverName: any;
945
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
946
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
947
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
948
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
949
+ }, {
950
+ rendererTypeName: string;
951
+ error: unknown;
952
+ statusMessage: string | undefined;
953
+ } & {
954
+ readonly RenderingComponent: React.FC<{
955
+ model: {
956
+ id: string;
957
+ type: string;
958
+ rpcDriverName: string | undefined;
959
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
960
+ rendererTypeName: string;
961
+ error: unknown;
962
+ statusMessage: string | undefined;
963
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
964
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
965
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
966
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
967
+ }, {
968
+ rendererTypeName: string;
969
+ error: unknown;
970
+ statusMessage: string | undefined;
971
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
972
+ onHorizontalScroll?: () => void;
973
+ blockState?: Record<string, any>;
974
+ }>;
975
+ readonly DisplayBlurb: React.FC<{
976
+ model: {
977
+ id: string;
978
+ type: string;
979
+ rpcDriverName: string | undefined;
980
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
981
+ rendererTypeName: string;
982
+ error: unknown;
983
+ statusMessage: string | undefined;
984
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
985
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
986
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
987
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
988
+ }, {
989
+ rendererTypeName: string;
990
+ error: unknown;
991
+ statusMessage: string | undefined;
992
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
993
+ }> | null;
994
+ readonly adapterConfig: any;
995
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
996
+ readonly parentDisplay: any;
997
+ readonly effectiveRpcDriverName: any;
998
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
999
+ };
1000
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
1001
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
1002
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
1003
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
1004
+ regionCannotBeRendered(): null;
1005
+ } & {
1006
+ setStatusMessage(arg?: string): void;
1007
+ setError(error?: unknown): void;
1008
+ setRpcDriverName(rpcDriverName: string): void;
1009
+ reload(): void;
1010
+ } & {
1011
+ scrollTop: number;
1012
+ } & {
1013
+ readonly height: number;
1014
+ } & {
1015
+ setScrollTop(scrollTop: number): void;
1016
+ setHeight(displayHeight: number): number;
1017
+ resizeHeight(distance: number): number;
1018
+ } & {
1019
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1020
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
1021
+ currStatsBpPerPx: number;
1022
+ } & {
1023
+ readonly currentBytesRequested: number;
1024
+ readonly currentFeatureScreenDensity: number;
1025
+ readonly maxFeatureScreenDensity: any;
1026
+ readonly featureDensityStatsReady: boolean;
1027
+ readonly maxAllowableBytes: number;
1028
+ } & {
1029
+ afterAttach(): void;
1030
+ } & {
1031
+ setCurrStatsBpPerPx(n: number): void;
1032
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1033
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1034
+ setFeatureDensityStatsP(arg: any): void;
1035
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1036
+ clearFeatureDensityStats(): void;
1037
+ } & {
1038
+ readonly regionTooLarge: boolean;
1039
+ readonly regionTooLargeReason: string;
1040
+ } & {
1041
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
1042
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
1043
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
1044
+ } & {
1045
+ mouseoverExtraInformation: string | undefined;
1046
+ featureIdUnderMouse: undefined | string;
1047
+ subfeatureIdUnderMouse: undefined | string;
1048
+ contextMenuFeature: undefined | Feature;
1049
+ } & {
1050
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
1051
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
1052
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
1053
+ } & {
1054
+ readonly renderDelay: number;
1055
+ readonly TooltipComponent: AnyReactComponentType;
1056
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
1057
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
1058
+ readonly selectedFeatureId: string | undefined;
1059
+ readonly featureWidgetType: {
1060
+ type: string;
1061
+ id: string;
1062
+ };
1063
+ } & {
1064
+ readonly showTooltipsEnabled: boolean;
1065
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
1066
+ readonly featureUnderMouse: Feature | undefined;
1067
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
1068
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord>;
1069
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
1070
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
1071
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
1072
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util.ts").FeatureLabelData>;
1073
+ } & {
1074
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
1075
+ deleteBlock(key: string): void;
1076
+ selectFeature(feature: Feature): void;
1077
+ navToFeature(feature: Feature): void;
1078
+ clearFeatureSelection(): void;
1079
+ setFeatureIdUnderMouse(feature?: string): void;
1080
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
1081
+ setContextMenuFeature(feature?: Feature): void;
1082
+ setMouseoverExtraInformation(extra?: string): void;
1083
+ setShowLegend(s: boolean): void;
1084
+ setShowTooltips(arg: boolean): void;
1085
+ } & {
1086
+ reload(): Promise<void>;
1087
+ } & {
1088
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
1089
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
1090
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1091
+ onMouseMove(_: unknown, featureId?: string): void;
1092
+ onMouseLeave(_: unknown): void;
1093
+ onContextMenu(_: unknown): void;
1094
+ };
228
1095
  renderProps(): any;
229
1096
  } & {
230
1097
  renderSvg(opts: ExportSvgDisplayOptions): Promise<import("react/jsx-runtime").JSX.Element>;
@@ -235,18 +1102,19 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
235
1102
  currStatsBpPerPx: number;
236
1103
  scoreMin: number;
237
1104
  scoreMax: number;
1105
+ statsRegion?: string;
238
1106
  } | undefined;
239
- statsFetchInProgress: undefined | string;
1107
+ statsFetchInProgress: undefined | StopToken;
240
1108
  } & {
241
1109
  updateQuantitativeStats(stats: {
242
1110
  currStatsBpPerPx: number;
243
1111
  scoreMin: number;
244
1112
  scoreMax: number;
245
- }): void;
1113
+ }, statsRegion?: string): void;
246
1114
  setColor(color?: string): void;
247
1115
  setPosColor(color?: string): void;
248
1116
  setNegColor(color?: string): void;
249
- setStatsLoading(arg?: string): void;
1117
+ setStatsLoading(arg?: StopToken): void;
250
1118
  selectFeature(feature: Feature): void;
251
1119
  setResolution(res: number): void;
252
1120
  setFill(fill: number): void;
@@ -268,17 +1136,7 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
268
1136
  readonly minScore: number;
269
1137
  } & {
270
1138
  readonly adapterCapabilities: string[];
271
- readonly rendererConfig: {
272
- [x: string]: any;
273
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
274
- setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
275
- [x: string]: any;
276
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
277
- setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
278
- [x: string]: any;
279
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
280
- } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
281
- } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
1139
+ readonly rendererConfig: any;
282
1140
  readonly autoscaleType: string;
283
1141
  } & {
284
1142
  readonly domain: number[] | undefined;
@@ -291,6 +1149,7 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
291
1149
  currStatsBpPerPx: number;
292
1150
  scoreMin: number;
293
1151
  scoreMax: number;
1152
+ statsRegion?: string;
294
1153
  } | undefined;
295
1154
  autoscaleType: string;
296
1155
  scaleType: string;
@@ -325,12 +1184,12 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
325
1184
  } & {
326
1185
  reload(): Promise<void>;
327
1186
  } & {
328
- sourcesLoadingStopToken: string | undefined;
1187
+ sourcesLoadingStopToken: StopToken | undefined;
329
1188
  featureUnderMouseVolatile: Feature | undefined;
330
1189
  sourcesVolatile: Source[] | undefined;
331
1190
  } & {
332
1191
  setShowSidebar(arg: boolean): void;
333
- setSourcesLoading(str: string): void;
1192
+ setSourcesLoading(str: StopToken): void;
334
1193
  setLayout(layout: Source[]): void;
335
1194
  clearLayout(): void;
336
1195
  setSources(sources: Source[]): void;
@@ -343,20 +1202,22 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
343
1202
  readonly graphType: boolean;
344
1203
  readonly needsFullHeightScalebar: boolean;
345
1204
  readonly isMultiRow: boolean;
346
- readonly needsCustomLegend: boolean;
347
1205
  readonly canHaveFill: boolean;
1206
+ readonly needsCustomLegend: boolean;
348
1207
  readonly renderColorBoxes: boolean;
349
1208
  readonly prefersOffset: boolean;
350
1209
  readonly sourcesWithoutLayout: {
351
1210
  color: string;
352
1211
  baseUri?: string;
353
1212
  name: string;
1213
+ source: string;
354
1214
  group?: string;
355
1215
  }[] | undefined;
356
1216
  readonly sources: {
357
1217
  color: string;
358
1218
  baseUri?: string;
359
1219
  name: string;
1220
+ source: string;
360
1221
  group?: string;
361
1222
  }[] | undefined;
362
1223
  readonly quantitativeStatsReady: boolean;
@@ -379,11 +1240,2575 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
379
1240
  readonly canDisplayLegendLabels: boolean;
380
1241
  readonly labelWidth: number;
381
1242
  renderProps(): any;
1243
+ renderingProps(): {
1244
+ displayModel: {
1245
+ id: string;
1246
+ type: "MultiLinearWiggleDisplay";
1247
+ rpcDriverName: string | undefined;
1248
+ heightPreConfig: number | undefined;
1249
+ userBpPerPxLimit: number | undefined;
1250
+ userByteSizeLimit: number | undefined;
1251
+ blockState: import("@jbrowse/mobx-state-tree").IMSTMap<import("@jbrowse/mobx-state-tree").IModelType<{
1252
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1253
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
1254
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
1255
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1256
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1257
+ }, {
1258
+ stopToken: StopToken | undefined;
1259
+ filled: boolean;
1260
+ reactElement: React.ReactElement | undefined;
1261
+ features: Map<string, Feature> | undefined;
1262
+ layout: any;
1263
+ blockStatusMessage: string;
1264
+ error: unknown;
1265
+ message: string | undefined;
1266
+ maxHeightReached: boolean;
1267
+ ReactComponent: ({ model, }: {
1268
+ model: {
1269
+ error?: unknown;
1270
+ reload: () => void;
1271
+ message?: React.ReactNode;
1272
+ statusMessage?: string;
1273
+ reactElement?: React.ReactElement;
1274
+ isRenderingPending?: boolean;
1275
+ };
1276
+ }) => import("react/jsx-runtime").JSX.Element;
1277
+ renderProps: any;
1278
+ renderArgs: Record<string, unknown> | undefined;
1279
+ isRenderingPending: boolean;
1280
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
1281
+ } & {
1282
+ doReload(): void;
1283
+ setStatusMessage(message: string): void;
1284
+ setLoading(newStopToken: StopToken): void;
1285
+ setMessage(messageText: string): void;
1286
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
1287
+ setError(error: unknown): void;
1288
+ reload(): void;
1289
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
1290
+ beforeDestroy(): void;
1291
+ } & {
1292
+ readonly statusMessage: any;
1293
+ } & {
1294
+ afterAttach(): void;
1295
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
1296
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1297
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
1298
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
1299
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1300
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1301
+ }, {
1302
+ stopToken: StopToken | undefined;
1303
+ filled: boolean;
1304
+ reactElement: React.ReactElement | undefined;
1305
+ features: Map<string, Feature> | undefined;
1306
+ layout: any;
1307
+ blockStatusMessage: string;
1308
+ error: unknown;
1309
+ message: string | undefined;
1310
+ maxHeightReached: boolean;
1311
+ ReactComponent: ({ model, }: {
1312
+ model: {
1313
+ error?: unknown;
1314
+ reload: () => void;
1315
+ message?: React.ReactNode;
1316
+ statusMessage?: string;
1317
+ reactElement?: React.ReactElement;
1318
+ isRenderingPending?: boolean;
1319
+ };
1320
+ }) => import("react/jsx-runtime").JSX.Element;
1321
+ renderProps: any;
1322
+ renderArgs: Record<string, unknown> | undefined;
1323
+ isRenderingPending: boolean;
1324
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
1325
+ } & {
1326
+ doReload(): void;
1327
+ setStatusMessage(message: string): void;
1328
+ setLoading(newStopToken: StopToken): void;
1329
+ setMessage(messageText: string): void;
1330
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
1331
+ setError(error: unknown): void;
1332
+ reload(): void;
1333
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
1334
+ beforeDestroy(): void;
1335
+ } & {
1336
+ readonly statusMessage: any;
1337
+ } & {
1338
+ afterAttach(): void;
1339
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
1340
+ configuration: {
1341
+ [x: string]: any;
1342
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1343
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1344
+ [x: string]: any;
1345
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1346
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1347
+ [x: string]: any;
1348
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
1349
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
1350
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1351
+ maxFeatureScreenDensity: {
1352
+ type: string;
1353
+ description: string;
1354
+ defaultValue: number;
1355
+ };
1356
+ fetchSizeLimit: {
1357
+ type: string;
1358
+ defaultValue: number;
1359
+ description: string;
1360
+ };
1361
+ height: {
1362
+ type: string;
1363
+ defaultValue: number;
1364
+ description: string;
1365
+ };
1366
+ mouseover: {
1367
+ type: string;
1368
+ description: string;
1369
+ defaultValue: string;
1370
+ contextVariable: string[];
1371
+ };
1372
+ jexlFilters: {
1373
+ type: string;
1374
+ description: string;
1375
+ defaultValue: never[];
1376
+ };
1377
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">> & AnyConfigurationSchemaType> & {
1378
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1379
+ [x: string]: any;
1380
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
1381
+ };
1382
+ showLegend: boolean | undefined;
1383
+ showTooltips: boolean | undefined;
1384
+ selectedRendering: string;
1385
+ resolution: number;
1386
+ fill: boolean | undefined;
1387
+ minSize: number | undefined;
1388
+ color: string | undefined;
1389
+ posColor: string | undefined;
1390
+ negColor: string | undefined;
1391
+ summaryScoreMode: string | undefined;
1392
+ rendererTypeNameState: string | undefined;
1393
+ scale: string | undefined;
1394
+ autoscale: string | undefined;
1395
+ displayCrossHatches: boolean | undefined;
1396
+ constraints: {
1397
+ max: number | undefined;
1398
+ min: number | undefined;
1399
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").IModelType<{
1400
+ max: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1401
+ min: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1402
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>, [undefined]>>;
1403
+ layout: Source[] & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").IType<Source[], Source[], Source[]>, [undefined]>>;
1404
+ showSidebar: boolean;
1405
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1406
+ rendererTypeName: string;
1407
+ error: unknown;
1408
+ statusMessage: string | undefined;
1409
+ } & {
1410
+ readonly RenderingComponent: React.FC<{
1411
+ model: {
1412
+ id: string;
1413
+ type: string;
1414
+ rpcDriverName: string | undefined;
1415
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1416
+ rendererTypeName: string;
1417
+ error: unknown;
1418
+ statusMessage: string | undefined;
1419
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1420
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1421
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1422
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1423
+ }, {
1424
+ rendererTypeName: string;
1425
+ error: unknown;
1426
+ statusMessage: string | undefined;
1427
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1428
+ onHorizontalScroll?: () => void;
1429
+ blockState?: Record<string, any>;
1430
+ }>;
1431
+ readonly DisplayBlurb: React.FC<{
1432
+ model: {
1433
+ id: string;
1434
+ type: string;
1435
+ rpcDriverName: string | undefined;
1436
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1437
+ rendererTypeName: string;
1438
+ error: unknown;
1439
+ statusMessage: string | undefined;
1440
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1441
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1442
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1443
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1444
+ }, {
1445
+ rendererTypeName: string;
1446
+ error: unknown;
1447
+ statusMessage: string | undefined;
1448
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1449
+ }> | null;
1450
+ readonly adapterConfig: any;
1451
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1452
+ readonly parentDisplay: any;
1453
+ readonly effectiveRpcDriverName: any;
1454
+ } & {
1455
+ renderProps(): any;
1456
+ renderingProps(): {
1457
+ displayModel: {
1458
+ id: string;
1459
+ type: string;
1460
+ rpcDriverName: string | undefined;
1461
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1462
+ rendererTypeName: string;
1463
+ error: unknown;
1464
+ statusMessage: string | undefined;
1465
+ } & {
1466
+ readonly RenderingComponent: React.FC<{
1467
+ model: {
1468
+ id: string;
1469
+ type: string;
1470
+ rpcDriverName: string | undefined;
1471
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1472
+ rendererTypeName: string;
1473
+ error: unknown;
1474
+ statusMessage: string | undefined;
1475
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1476
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1477
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1478
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1479
+ }, {
1480
+ rendererTypeName: string;
1481
+ error: unknown;
1482
+ statusMessage: string | undefined;
1483
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1484
+ onHorizontalScroll?: () => void;
1485
+ blockState?: Record<string, any>;
1486
+ }>;
1487
+ readonly DisplayBlurb: React.FC<{
1488
+ model: {
1489
+ id: string;
1490
+ type: string;
1491
+ rpcDriverName: string | undefined;
1492
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1493
+ rendererTypeName: string;
1494
+ error: unknown;
1495
+ statusMessage: string | undefined;
1496
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1497
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1498
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1499
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1500
+ }, {
1501
+ rendererTypeName: string;
1502
+ error: unknown;
1503
+ statusMessage: string | undefined;
1504
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1505
+ }> | null;
1506
+ readonly adapterConfig: any;
1507
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1508
+ readonly parentDisplay: any;
1509
+ readonly effectiveRpcDriverName: any;
1510
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1511
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1512
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1513
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1514
+ }, {
1515
+ rendererTypeName: string;
1516
+ error: unknown;
1517
+ statusMessage: string | undefined;
1518
+ } & {
1519
+ readonly RenderingComponent: React.FC<{
1520
+ model: {
1521
+ id: string;
1522
+ type: string;
1523
+ rpcDriverName: string | undefined;
1524
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1525
+ rendererTypeName: string;
1526
+ error: unknown;
1527
+ statusMessage: string | undefined;
1528
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1529
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1530
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1531
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1532
+ }, {
1533
+ rendererTypeName: string;
1534
+ error: unknown;
1535
+ statusMessage: string | undefined;
1536
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1537
+ onHorizontalScroll?: () => void;
1538
+ blockState?: Record<string, any>;
1539
+ }>;
1540
+ readonly DisplayBlurb: React.FC<{
1541
+ model: {
1542
+ id: string;
1543
+ type: string;
1544
+ rpcDriverName: string | undefined;
1545
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1546
+ rendererTypeName: string;
1547
+ error: unknown;
1548
+ statusMessage: string | undefined;
1549
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1550
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1551
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1552
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1553
+ }, {
1554
+ rendererTypeName: string;
1555
+ error: unknown;
1556
+ statusMessage: string | undefined;
1557
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1558
+ }> | null;
1559
+ readonly adapterConfig: any;
1560
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1561
+ readonly parentDisplay: any;
1562
+ readonly effectiveRpcDriverName: any;
1563
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1564
+ };
1565
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
1566
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
1567
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
1568
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
1569
+ regionCannotBeRendered(): null;
1570
+ } & {
1571
+ setStatusMessage(arg?: string): void;
1572
+ setError(error?: unknown): void;
1573
+ setRpcDriverName(rpcDriverName: string): void;
1574
+ reload(): void;
1575
+ } & {
1576
+ scrollTop: number;
1577
+ } & {
1578
+ readonly height: number;
1579
+ } & {
1580
+ setScrollTop(scrollTop: number): void;
1581
+ setHeight(displayHeight: number): number;
1582
+ resizeHeight(distance: number): number;
1583
+ } & {
1584
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1585
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
1586
+ currStatsBpPerPx: number;
1587
+ } & {
1588
+ readonly currentBytesRequested: number;
1589
+ readonly currentFeatureScreenDensity: number;
1590
+ readonly maxFeatureScreenDensity: any;
1591
+ readonly featureDensityStatsReady: boolean;
1592
+ readonly maxAllowableBytes: number;
1593
+ } & {
1594
+ afterAttach(): void;
1595
+ } & {
1596
+ setCurrStatsBpPerPx(n: number): void;
1597
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1598
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1599
+ setFeatureDensityStatsP(arg: any): void;
1600
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1601
+ clearFeatureDensityStats(): void;
1602
+ } & {
1603
+ readonly regionTooLarge: boolean;
1604
+ readonly regionTooLargeReason: string;
1605
+ } & {
1606
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
1607
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
1608
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
1609
+ } & {
1610
+ mouseoverExtraInformation: string | undefined;
1611
+ featureIdUnderMouse: undefined | string;
1612
+ subfeatureIdUnderMouse: undefined | string;
1613
+ contextMenuFeature: undefined | Feature;
1614
+ } & {
1615
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
1616
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
1617
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
1618
+ } & {
1619
+ readonly renderDelay: number;
1620
+ readonly TooltipComponent: AnyReactComponentType;
1621
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
1622
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
1623
+ readonly selectedFeatureId: string | undefined;
1624
+ readonly featureWidgetType: {
1625
+ type: string;
1626
+ id: string;
1627
+ };
1628
+ } & {
1629
+ readonly showTooltipsEnabled: boolean;
1630
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
1631
+ readonly featureUnderMouse: Feature | undefined;
1632
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
1633
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord>;
1634
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
1635
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
1636
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
1637
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util.ts").FeatureLabelData>;
1638
+ } & {
1639
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
1640
+ deleteBlock(key: string): void;
1641
+ selectFeature(feature: Feature): void;
1642
+ navToFeature(feature: Feature): void;
1643
+ clearFeatureSelection(): void;
1644
+ setFeatureIdUnderMouse(feature?: string): void;
1645
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
1646
+ setContextMenuFeature(feature?: Feature): void;
1647
+ setMouseoverExtraInformation(extra?: string): void;
1648
+ setShowLegend(s: boolean): void;
1649
+ setShowTooltips(arg: boolean): void;
1650
+ } & {
1651
+ reload(): Promise<void>;
1652
+ } & {
1653
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
1654
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
1655
+ } & {
1656
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
1657
+ contextMenuItems(): import("@jbrowse/core/ui").MenuItem[];
1658
+ renderingProps(): {
1659
+ displayModel: {
1660
+ id: string;
1661
+ type: string;
1662
+ rpcDriverName: string | undefined;
1663
+ heightPreConfig: number | undefined;
1664
+ userBpPerPxLimit: number | undefined;
1665
+ userByteSizeLimit: number | undefined;
1666
+ blockState: import("@jbrowse/mobx-state-tree").IMSTMap<import("@jbrowse/mobx-state-tree").IModelType<{
1667
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1668
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
1669
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
1670
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1671
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1672
+ }, {
1673
+ stopToken: StopToken | undefined;
1674
+ filled: boolean;
1675
+ reactElement: React.ReactElement | undefined;
1676
+ features: Map<string, Feature> | undefined;
1677
+ layout: any;
1678
+ blockStatusMessage: string;
1679
+ error: unknown;
1680
+ message: string | undefined;
1681
+ maxHeightReached: boolean;
1682
+ ReactComponent: ({ model, }: {
1683
+ model: {
1684
+ error?: unknown;
1685
+ reload: () => void;
1686
+ message?: React.ReactNode;
1687
+ statusMessage?: string;
1688
+ reactElement?: React.ReactElement;
1689
+ isRenderingPending?: boolean;
1690
+ };
1691
+ }) => import("react/jsx-runtime").JSX.Element;
1692
+ renderProps: any;
1693
+ renderArgs: Record<string, unknown> | undefined;
1694
+ isRenderingPending: boolean;
1695
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
1696
+ } & {
1697
+ doReload(): void;
1698
+ setStatusMessage(message: string): void;
1699
+ setLoading(newStopToken: StopToken): void;
1700
+ setMessage(messageText: string): void;
1701
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
1702
+ setError(error: unknown): void;
1703
+ reload(): void;
1704
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
1705
+ beforeDestroy(): void;
1706
+ } & {
1707
+ readonly statusMessage: any;
1708
+ } & {
1709
+ afterAttach(): void;
1710
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
1711
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1712
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
1713
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
1714
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1715
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1716
+ }, {
1717
+ stopToken: StopToken | undefined;
1718
+ filled: boolean;
1719
+ reactElement: React.ReactElement | undefined;
1720
+ features: Map<string, Feature> | undefined;
1721
+ layout: any;
1722
+ blockStatusMessage: string;
1723
+ error: unknown;
1724
+ message: string | undefined;
1725
+ maxHeightReached: boolean;
1726
+ ReactComponent: ({ model, }: {
1727
+ model: {
1728
+ error?: unknown;
1729
+ reload: () => void;
1730
+ message?: React.ReactNode;
1731
+ statusMessage?: string;
1732
+ reactElement?: React.ReactElement;
1733
+ isRenderingPending?: boolean;
1734
+ };
1735
+ }) => import("react/jsx-runtime").JSX.Element;
1736
+ renderProps: any;
1737
+ renderArgs: Record<string, unknown> | undefined;
1738
+ isRenderingPending: boolean;
1739
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
1740
+ } & {
1741
+ doReload(): void;
1742
+ setStatusMessage(message: string): void;
1743
+ setLoading(newStopToken: StopToken): void;
1744
+ setMessage(messageText: string): void;
1745
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
1746
+ setError(error: unknown): void;
1747
+ reload(): void;
1748
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
1749
+ beforeDestroy(): void;
1750
+ } & {
1751
+ readonly statusMessage: any;
1752
+ } & {
1753
+ afterAttach(): void;
1754
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
1755
+ configuration: {
1756
+ [x: string]: any;
1757
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1758
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1759
+ [x: string]: any;
1760
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1761
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1762
+ [x: string]: any;
1763
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
1764
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
1765
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1766
+ maxFeatureScreenDensity: {
1767
+ type: string;
1768
+ description: string;
1769
+ defaultValue: number;
1770
+ };
1771
+ fetchSizeLimit: {
1772
+ type: string;
1773
+ defaultValue: number;
1774
+ description: string;
1775
+ };
1776
+ height: {
1777
+ type: string;
1778
+ defaultValue: number;
1779
+ description: string;
1780
+ };
1781
+ mouseover: {
1782
+ type: string;
1783
+ description: string;
1784
+ defaultValue: string;
1785
+ contextVariable: string[];
1786
+ };
1787
+ jexlFilters: {
1788
+ type: string;
1789
+ description: string;
1790
+ defaultValue: never[];
1791
+ };
1792
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>>;
1793
+ showLegend: boolean | undefined;
1794
+ showTooltips: boolean | undefined;
1795
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1796
+ rendererTypeName: string;
1797
+ error: unknown;
1798
+ statusMessage: string | undefined;
1799
+ } & {
1800
+ readonly RenderingComponent: React.FC<{
1801
+ model: {
1802
+ id: string;
1803
+ type: string;
1804
+ rpcDriverName: string | undefined;
1805
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1806
+ rendererTypeName: string;
1807
+ error: unknown;
1808
+ statusMessage: string | undefined;
1809
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1810
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1811
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1812
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1813
+ }, {
1814
+ rendererTypeName: string;
1815
+ error: unknown;
1816
+ statusMessage: string | undefined;
1817
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1818
+ onHorizontalScroll?: () => void;
1819
+ blockState?: Record<string, any>;
1820
+ }>;
1821
+ readonly DisplayBlurb: React.FC<{
1822
+ model: {
1823
+ id: string;
1824
+ type: string;
1825
+ rpcDriverName: string | undefined;
1826
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1827
+ rendererTypeName: string;
1828
+ error: unknown;
1829
+ statusMessage: string | undefined;
1830
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1831
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1832
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1833
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1834
+ }, {
1835
+ rendererTypeName: string;
1836
+ error: unknown;
1837
+ statusMessage: string | undefined;
1838
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1839
+ }> | null;
1840
+ readonly adapterConfig: any;
1841
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1842
+ readonly parentDisplay: any;
1843
+ readonly effectiveRpcDriverName: any;
1844
+ } & {
1845
+ renderProps(): any;
1846
+ renderingProps(): {
1847
+ displayModel: {
1848
+ id: string;
1849
+ type: string;
1850
+ rpcDriverName: string | undefined;
1851
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1852
+ rendererTypeName: string;
1853
+ error: unknown;
1854
+ statusMessage: string | undefined;
1855
+ } & {
1856
+ readonly RenderingComponent: React.FC<{
1857
+ model: {
1858
+ id: string;
1859
+ type: string;
1860
+ rpcDriverName: string | undefined;
1861
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1862
+ rendererTypeName: string;
1863
+ error: unknown;
1864
+ statusMessage: string | undefined;
1865
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1866
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1867
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1868
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1869
+ }, {
1870
+ rendererTypeName: string;
1871
+ error: unknown;
1872
+ statusMessage: string | undefined;
1873
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1874
+ onHorizontalScroll?: () => void;
1875
+ blockState?: Record<string, any>;
1876
+ }>;
1877
+ readonly DisplayBlurb: React.FC<{
1878
+ model: {
1879
+ id: string;
1880
+ type: string;
1881
+ rpcDriverName: string | undefined;
1882
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1883
+ rendererTypeName: string;
1884
+ error: unknown;
1885
+ statusMessage: string | undefined;
1886
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1887
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1888
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1889
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1890
+ }, {
1891
+ rendererTypeName: string;
1892
+ error: unknown;
1893
+ statusMessage: string | undefined;
1894
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1895
+ }> | null;
1896
+ readonly adapterConfig: any;
1897
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1898
+ readonly parentDisplay: any;
1899
+ readonly effectiveRpcDriverName: any;
1900
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1901
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1902
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1903
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1904
+ }, {
1905
+ rendererTypeName: string;
1906
+ error: unknown;
1907
+ statusMessage: string | undefined;
1908
+ } & {
1909
+ readonly RenderingComponent: React.FC<{
1910
+ model: {
1911
+ id: string;
1912
+ type: string;
1913
+ rpcDriverName: string | undefined;
1914
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1915
+ rendererTypeName: string;
1916
+ error: unknown;
1917
+ statusMessage: string | undefined;
1918
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1919
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1920
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1921
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1922
+ }, {
1923
+ rendererTypeName: string;
1924
+ error: unknown;
1925
+ statusMessage: string | undefined;
1926
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1927
+ onHorizontalScroll?: () => void;
1928
+ blockState?: Record<string, any>;
1929
+ }>;
1930
+ readonly DisplayBlurb: React.FC<{
1931
+ model: {
1932
+ id: string;
1933
+ type: string;
1934
+ rpcDriverName: string | undefined;
1935
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1936
+ rendererTypeName: string;
1937
+ error: unknown;
1938
+ statusMessage: string | undefined;
1939
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1940
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1941
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1942
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1943
+ }, {
1944
+ rendererTypeName: string;
1945
+ error: unknown;
1946
+ statusMessage: string | undefined;
1947
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1948
+ }> | null;
1949
+ readonly adapterConfig: any;
1950
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1951
+ readonly parentDisplay: any;
1952
+ readonly effectiveRpcDriverName: any;
1953
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1954
+ };
1955
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
1956
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
1957
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
1958
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
1959
+ regionCannotBeRendered(): null;
1960
+ } & {
1961
+ setStatusMessage(arg?: string): void;
1962
+ setError(error?: unknown): void;
1963
+ setRpcDriverName(rpcDriverName: string): void;
1964
+ reload(): void;
1965
+ } & {
1966
+ scrollTop: number;
1967
+ } & {
1968
+ readonly height: number;
1969
+ } & {
1970
+ setScrollTop(scrollTop: number): void;
1971
+ setHeight(displayHeight: number): number;
1972
+ resizeHeight(distance: number): number;
1973
+ } & {
1974
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1975
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
1976
+ currStatsBpPerPx: number;
1977
+ } & {
1978
+ readonly currentBytesRequested: number;
1979
+ readonly currentFeatureScreenDensity: number;
1980
+ readonly maxFeatureScreenDensity: any;
1981
+ readonly featureDensityStatsReady: boolean;
1982
+ readonly maxAllowableBytes: number;
1983
+ } & {
1984
+ afterAttach(): void;
1985
+ } & {
1986
+ setCurrStatsBpPerPx(n: number): void;
1987
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1988
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1989
+ setFeatureDensityStatsP(arg: any): void;
1990
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1991
+ clearFeatureDensityStats(): void;
1992
+ } & {
1993
+ readonly regionTooLarge: boolean;
1994
+ readonly regionTooLargeReason: string;
1995
+ } & {
1996
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
1997
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
1998
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
1999
+ } & {
2000
+ mouseoverExtraInformation: string | undefined;
2001
+ featureIdUnderMouse: undefined | string;
2002
+ subfeatureIdUnderMouse: undefined | string;
2003
+ contextMenuFeature: undefined | Feature;
2004
+ } & {
2005
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
2006
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
2007
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
2008
+ } & {
2009
+ readonly renderDelay: number;
2010
+ readonly TooltipComponent: AnyReactComponentType;
2011
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
2012
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
2013
+ readonly selectedFeatureId: string | undefined;
2014
+ readonly featureWidgetType: {
2015
+ type: string;
2016
+ id: string;
2017
+ };
2018
+ } & {
2019
+ readonly showTooltipsEnabled: boolean;
2020
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
2021
+ readonly featureUnderMouse: Feature | undefined;
2022
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
2023
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord>;
2024
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
2025
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
2026
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
2027
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util.ts").FeatureLabelData>;
2028
+ } & {
2029
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
2030
+ deleteBlock(key: string): void;
2031
+ selectFeature(feature: Feature): void;
2032
+ navToFeature(feature: Feature): void;
2033
+ clearFeatureSelection(): void;
2034
+ setFeatureIdUnderMouse(feature?: string): void;
2035
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
2036
+ setContextMenuFeature(feature?: Feature): void;
2037
+ setMouseoverExtraInformation(extra?: string): void;
2038
+ setShowLegend(s: boolean): void;
2039
+ setShowTooltips(arg: boolean): void;
2040
+ } & {
2041
+ reload(): Promise<void>;
2042
+ } & {
2043
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
2044
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
2045
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2046
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2047
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2048
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2049
+ } & {
2050
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
2051
+ } & {
2052
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
2053
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
2054
+ } & {
2055
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
2056
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2057
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
2058
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
2059
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
2060
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
2061
+ }, {
2062
+ stopToken: StopToken | undefined;
2063
+ filled: boolean;
2064
+ reactElement: React.ReactElement | undefined;
2065
+ features: Map<string, Feature> | undefined;
2066
+ layout: any;
2067
+ blockStatusMessage: string;
2068
+ error: unknown;
2069
+ message: string | undefined;
2070
+ maxHeightReached: boolean;
2071
+ ReactComponent: ({ model, }: {
2072
+ model: {
2073
+ error?: unknown;
2074
+ reload: () => void;
2075
+ message?: React.ReactNode;
2076
+ statusMessage?: string;
2077
+ reactElement?: React.ReactElement;
2078
+ isRenderingPending?: boolean;
2079
+ };
2080
+ }) => import("react/jsx-runtime").JSX.Element;
2081
+ renderProps: any;
2082
+ renderArgs: Record<string, unknown> | undefined;
2083
+ isRenderingPending: boolean;
2084
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
2085
+ } & {
2086
+ doReload(): void;
2087
+ setStatusMessage(message: string): void;
2088
+ setLoading(newStopToken: StopToken): void;
2089
+ setMessage(messageText: string): void;
2090
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
2091
+ setError(error: unknown): void;
2092
+ reload(): void;
2093
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
2094
+ beforeDestroy(): void;
2095
+ } & {
2096
+ readonly statusMessage: any;
2097
+ } & {
2098
+ afterAttach(): void;
2099
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2100
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
2101
+ maxFeatureScreenDensity: {
2102
+ type: string;
2103
+ description: string;
2104
+ defaultValue: number;
2105
+ };
2106
+ fetchSizeLimit: {
2107
+ type: string;
2108
+ defaultValue: number;
2109
+ description: string;
2110
+ };
2111
+ height: {
2112
+ type: string;
2113
+ defaultValue: number;
2114
+ description: string;
2115
+ };
2116
+ mouseover: {
2117
+ type: string;
2118
+ description: string;
2119
+ defaultValue: string;
2120
+ contextVariable: string[];
2121
+ };
2122
+ jexlFilters: {
2123
+ type: string;
2124
+ description: string;
2125
+ defaultValue: never[];
2126
+ };
2127
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
2128
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
2129
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
2130
+ }, {
2131
+ rendererTypeName: string;
2132
+ error: unknown;
2133
+ statusMessage: string | undefined;
2134
+ } & {
2135
+ readonly RenderingComponent: React.FC<{
2136
+ model: {
2137
+ id: string;
2138
+ type: string;
2139
+ rpcDriverName: string | undefined;
2140
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2141
+ rendererTypeName: string;
2142
+ error: unknown;
2143
+ statusMessage: string | undefined;
2144
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2145
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2146
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2147
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2148
+ }, {
2149
+ rendererTypeName: string;
2150
+ error: unknown;
2151
+ statusMessage: string | undefined;
2152
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2153
+ onHorizontalScroll?: () => void;
2154
+ blockState?: Record<string, any>;
2155
+ }>;
2156
+ readonly DisplayBlurb: React.FC<{
2157
+ model: {
2158
+ id: string;
2159
+ type: string;
2160
+ rpcDriverName: string | undefined;
2161
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2162
+ rendererTypeName: string;
2163
+ error: unknown;
2164
+ statusMessage: string | undefined;
2165
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2166
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2167
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2168
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2169
+ }, {
2170
+ rendererTypeName: string;
2171
+ error: unknown;
2172
+ statusMessage: string | undefined;
2173
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2174
+ }> | null;
2175
+ readonly adapterConfig: any;
2176
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
2177
+ readonly parentDisplay: any;
2178
+ readonly effectiveRpcDriverName: any;
2179
+ } & {
2180
+ renderProps(): any;
2181
+ renderingProps(): {
2182
+ displayModel: {
2183
+ id: string;
2184
+ type: string;
2185
+ rpcDriverName: string | undefined;
2186
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2187
+ rendererTypeName: string;
2188
+ error: unknown;
2189
+ statusMessage: string | undefined;
2190
+ } & {
2191
+ readonly RenderingComponent: React.FC<{
2192
+ model: {
2193
+ id: string;
2194
+ type: string;
2195
+ rpcDriverName: string | undefined;
2196
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2197
+ rendererTypeName: string;
2198
+ error: unknown;
2199
+ statusMessage: string | undefined;
2200
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2201
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2202
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2203
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2204
+ }, {
2205
+ rendererTypeName: string;
2206
+ error: unknown;
2207
+ statusMessage: string | undefined;
2208
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2209
+ onHorizontalScroll?: () => void;
2210
+ blockState?: Record<string, any>;
2211
+ }>;
2212
+ readonly DisplayBlurb: React.FC<{
2213
+ model: {
2214
+ id: string;
2215
+ type: string;
2216
+ rpcDriverName: string | undefined;
2217
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2218
+ rendererTypeName: string;
2219
+ error: unknown;
2220
+ statusMessage: string | undefined;
2221
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2222
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2223
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2224
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2225
+ }, {
2226
+ rendererTypeName: string;
2227
+ error: unknown;
2228
+ statusMessage: string | undefined;
2229
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2230
+ }> | null;
2231
+ readonly adapterConfig: any;
2232
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
2233
+ readonly parentDisplay: any;
2234
+ readonly effectiveRpcDriverName: any;
2235
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2236
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2237
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2238
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2239
+ }, {
2240
+ rendererTypeName: string;
2241
+ error: unknown;
2242
+ statusMessage: string | undefined;
2243
+ } & {
2244
+ readonly RenderingComponent: React.FC<{
2245
+ model: {
2246
+ id: string;
2247
+ type: string;
2248
+ rpcDriverName: string | undefined;
2249
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2250
+ rendererTypeName: string;
2251
+ error: unknown;
2252
+ statusMessage: string | undefined;
2253
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2254
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2255
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2256
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2257
+ }, {
2258
+ rendererTypeName: string;
2259
+ error: unknown;
2260
+ statusMessage: string | undefined;
2261
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2262
+ onHorizontalScroll?: () => void;
2263
+ blockState?: Record<string, any>;
2264
+ }>;
2265
+ readonly DisplayBlurb: React.FC<{
2266
+ model: {
2267
+ id: string;
2268
+ type: string;
2269
+ rpcDriverName: string | undefined;
2270
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2271
+ rendererTypeName: string;
2272
+ error: unknown;
2273
+ statusMessage: string | undefined;
2274
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2275
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2276
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2277
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2278
+ }, {
2279
+ rendererTypeName: string;
2280
+ error: unknown;
2281
+ statusMessage: string | undefined;
2282
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2283
+ }> | null;
2284
+ readonly adapterConfig: any;
2285
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
2286
+ readonly parentDisplay: any;
2287
+ readonly effectiveRpcDriverName: any;
2288
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2289
+ };
2290
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
2291
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
2292
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
2293
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
2294
+ regionCannotBeRendered(): null;
2295
+ } & {
2296
+ setStatusMessage(arg?: string): void;
2297
+ setError(error?: unknown): void;
2298
+ setRpcDriverName(rpcDriverName: string): void;
2299
+ reload(): void;
2300
+ } & {
2301
+ scrollTop: number;
2302
+ } & {
2303
+ readonly height: number;
2304
+ } & {
2305
+ setScrollTop(scrollTop: number): void;
2306
+ setHeight(displayHeight: number): number;
2307
+ resizeHeight(distance: number): number;
2308
+ } & {
2309
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
2310
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
2311
+ currStatsBpPerPx: number;
2312
+ } & {
2313
+ readonly currentBytesRequested: number;
2314
+ readonly currentFeatureScreenDensity: number;
2315
+ readonly maxFeatureScreenDensity: any;
2316
+ readonly featureDensityStatsReady: boolean;
2317
+ readonly maxAllowableBytes: number;
2318
+ } & {
2319
+ afterAttach(): void;
2320
+ } & {
2321
+ setCurrStatsBpPerPx(n: number): void;
2322
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
2323
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
2324
+ setFeatureDensityStatsP(arg: any): void;
2325
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
2326
+ clearFeatureDensityStats(): void;
2327
+ } & {
2328
+ readonly regionTooLarge: boolean;
2329
+ readonly regionTooLargeReason: string;
2330
+ } & {
2331
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
2332
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
2333
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
2334
+ } & {
2335
+ mouseoverExtraInformation: string | undefined;
2336
+ featureIdUnderMouse: undefined | string;
2337
+ subfeatureIdUnderMouse: undefined | string;
2338
+ contextMenuFeature: undefined | Feature;
2339
+ } & {
2340
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
2341
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
2342
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
2343
+ } & {
2344
+ readonly renderDelay: number;
2345
+ readonly TooltipComponent: AnyReactComponentType;
2346
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
2347
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
2348
+ readonly selectedFeatureId: string | undefined;
2349
+ readonly featureWidgetType: {
2350
+ type: string;
2351
+ id: string;
2352
+ };
2353
+ } & {
2354
+ readonly showTooltipsEnabled: boolean;
2355
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
2356
+ readonly featureUnderMouse: Feature | undefined;
2357
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
2358
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord>;
2359
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
2360
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
2361
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
2362
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util.ts").FeatureLabelData>;
2363
+ } & {
2364
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
2365
+ deleteBlock(key: string): void;
2366
+ selectFeature(feature: Feature): void;
2367
+ navToFeature(feature: Feature): void;
2368
+ clearFeatureSelection(): void;
2369
+ setFeatureIdUnderMouse(feature?: string): void;
2370
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
2371
+ setContextMenuFeature(feature?: Feature): void;
2372
+ setMouseoverExtraInformation(extra?: string): void;
2373
+ setShowLegend(s: boolean): void;
2374
+ setShowTooltips(arg: boolean): void;
2375
+ } & {
2376
+ reload(): Promise<void>;
2377
+ } & {
2378
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
2379
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
2380
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2381
+ onMouseMove(_: unknown, featureId?: string): void;
2382
+ onMouseLeave(_: unknown): void;
2383
+ onContextMenu(_: unknown): void;
2384
+ };
2385
+ renderProps(): any;
2386
+ } & {
2387
+ renderSvg(opts: ExportSvgDisplayOptions): Promise<import("react/jsx-runtime").JSX.Element>;
2388
+ afterAttach(): void;
2389
+ } & {
2390
+ message: undefined | string;
2391
+ stats: {
2392
+ currStatsBpPerPx: number;
2393
+ scoreMin: number;
2394
+ scoreMax: number;
2395
+ statsRegion?: string;
2396
+ } | undefined;
2397
+ statsFetchInProgress: undefined | StopToken;
2398
+ } & {
2399
+ updateQuantitativeStats(stats: {
2400
+ currStatsBpPerPx: number;
2401
+ scoreMin: number;
2402
+ scoreMax: number;
2403
+ }, statsRegion?: string): void;
2404
+ setColor(color?: string): void;
2405
+ setPosColor(color?: string): void;
2406
+ setNegColor(color?: string): void;
2407
+ setStatsLoading(arg?: StopToken): void;
2408
+ selectFeature(feature: Feature): void;
2409
+ setResolution(res: number): void;
2410
+ setFill(fill: number): void;
2411
+ toggleLogScale(): void;
2412
+ setScaleType(scale?: string): void;
2413
+ setSummaryScoreMode(val: string): void;
2414
+ setAutoscale(val: string): void;
2415
+ setMaxScore(val?: number): void;
2416
+ setRendererType(val: string): void;
2417
+ setMinScore(val?: number): void;
2418
+ toggleCrossHatches(): void;
2419
+ setCrossHatches(cross: boolean): void;
2420
+ } & {
2421
+ readonly adapterTypeName: any;
2422
+ readonly rendererTypeNameSimple: string;
2423
+ readonly filters: undefined;
2424
+ readonly scaleType: string;
2425
+ readonly maxScore: number;
2426
+ readonly minScore: number;
2427
+ } & {
2428
+ readonly adapterCapabilities: string[];
2429
+ readonly rendererConfig: any;
2430
+ readonly autoscaleType: string;
2431
+ } & {
2432
+ readonly domain: number[] | undefined;
2433
+ } & {
2434
+ readonly filled: boolean;
2435
+ readonly summaryScoreModeSetting: string;
2436
+ readonly scaleOpts: {
2437
+ domain: number[] | undefined;
2438
+ stats: {
2439
+ currStatsBpPerPx: number;
2440
+ scoreMin: number;
2441
+ scoreMax: number;
2442
+ statsRegion?: string;
2443
+ } | undefined;
2444
+ autoscaleType: string;
2445
+ scaleType: string;
2446
+ inverted: boolean;
2447
+ };
2448
+ readonly canHaveFill: boolean;
2449
+ readonly displayCrossHatchesSetting: boolean;
2450
+ readonly hasResolution: boolean;
2451
+ readonly hasGlobalStats: boolean;
2452
+ } & {
2453
+ scoreTrackMenuItems(): ({
2454
+ label: string;
2455
+ subMenu: {
2456
+ label: string;
2457
+ onClick: () => void;
2458
+ }[];
2459
+ onClick?: undefined;
2460
+ } | {
2461
+ label: string;
2462
+ subMenu: {
2463
+ label: string;
2464
+ type: string;
2465
+ checked: boolean;
2466
+ onClick: () => void;
2467
+ }[];
2468
+ onClick?: undefined;
2469
+ } | {
2470
+ label: string;
2471
+ onClick: () => void;
2472
+ subMenu?: undefined;
2473
+ })[];
2474
+ } & {
2475
+ reload(): Promise<void>;
2476
+ } & {
2477
+ sourcesLoadingStopToken: StopToken | undefined;
2478
+ featureUnderMouseVolatile: Feature | undefined;
2479
+ sourcesVolatile: Source[] | undefined;
2480
+ } & {
2481
+ setShowSidebar(arg: boolean): void;
2482
+ setSourcesLoading(str: StopToken): void;
2483
+ setLayout(layout: Source[]): void;
2484
+ clearLayout(): void;
2485
+ setSources(sources: Source[]): void;
2486
+ setFeatureUnderMouse(f?: Feature): void;
2487
+ } & {
2488
+ readonly featureUnderMouse: Feature | undefined;
2489
+ readonly TooltipComponent: AnyReactComponentType;
2490
+ readonly rendererTypeName: string;
2491
+ } & {
2492
+ readonly graphType: boolean;
2493
+ readonly needsFullHeightScalebar: boolean;
2494
+ readonly isMultiRow: boolean;
2495
+ readonly canHaveFill: boolean;
2496
+ readonly needsCustomLegend: boolean;
2497
+ readonly renderColorBoxes: boolean;
2498
+ readonly prefersOffset: boolean;
2499
+ readonly sourcesWithoutLayout: {
2500
+ color: string;
2501
+ baseUri?: string;
2502
+ name: string;
2503
+ source: string;
2504
+ group?: string;
2505
+ }[] | undefined;
2506
+ readonly sources: {
2507
+ color: string;
2508
+ baseUri?: string;
2509
+ name: string;
2510
+ source: string;
2511
+ group?: string;
2512
+ }[] | undefined;
2513
+ readonly quantitativeStatsReady: boolean;
2514
+ } & {
2515
+ readonly rowHeight: number;
2516
+ readonly rowHeightTooSmallForScalebar: boolean;
2517
+ readonly useMinimalTicks: boolean;
2518
+ } & {
2519
+ adapterProps(): any;
2520
+ readonly ticks: {
2521
+ range: number[];
2522
+ values: number[];
2523
+ format: (d: import("d3-scale").NumberValue) => string;
2524
+ position: import("d3-scale").ScaleLinear<number, number, never> | import("d3-scale").ScaleQuantize<number, never>;
2525
+ } | undefined;
2526
+ readonly colors: string[];
2527
+ readonly quantitativeStatsRelevantToCurrentZoom: boolean;
2528
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2529
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2530
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2531
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2532
+ } & {
2533
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
2534
+ } & {
2535
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
2536
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
2537
+ } & {
2538
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
2539
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2540
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
2541
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
2542
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
2543
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
2544
+ }, {
2545
+ stopToken: StopToken | undefined;
2546
+ filled: boolean;
2547
+ reactElement: React.ReactElement | undefined;
2548
+ features: Map<string, Feature> | undefined;
2549
+ layout: any;
2550
+ blockStatusMessage: string;
2551
+ error: unknown;
2552
+ message: string | undefined;
2553
+ maxHeightReached: boolean;
2554
+ ReactComponent: ({ model, }: {
2555
+ model: {
2556
+ error?: unknown;
2557
+ reload: () => void;
2558
+ message?: React.ReactNode;
2559
+ statusMessage?: string;
2560
+ reactElement?: React.ReactElement;
2561
+ isRenderingPending?: boolean;
2562
+ };
2563
+ }) => import("react/jsx-runtime").JSX.Element;
2564
+ renderProps: any;
2565
+ renderArgs: Record<string, unknown> | undefined;
2566
+ isRenderingPending: boolean;
2567
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
2568
+ } & {
2569
+ doReload(): void;
2570
+ setStatusMessage(message: string): void;
2571
+ setLoading(newStopToken: StopToken): void;
2572
+ setMessage(messageText: string): void;
2573
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
2574
+ setError(error: unknown): void;
2575
+ reload(): void;
2576
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
2577
+ beforeDestroy(): void;
2578
+ } & {
2579
+ readonly statusMessage: any;
2580
+ } & {
2581
+ afterAttach(): void;
2582
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2583
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
2584
+ maxFeatureScreenDensity: {
2585
+ type: string;
2586
+ description: string;
2587
+ defaultValue: number;
2588
+ };
2589
+ fetchSizeLimit: {
2590
+ type: string;
2591
+ defaultValue: number;
2592
+ description: string;
2593
+ };
2594
+ height: {
2595
+ type: string;
2596
+ defaultValue: number;
2597
+ description: string;
2598
+ };
2599
+ mouseover: {
2600
+ type: string;
2601
+ description: string;
2602
+ defaultValue: string;
2603
+ contextVariable: string[];
2604
+ };
2605
+ jexlFilters: {
2606
+ type: string;
2607
+ description: string;
2608
+ defaultValue: never[];
2609
+ };
2610
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
2611
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
2612
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
2613
+ } & {
2614
+ selectedRendering: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2615
+ resolution: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<number>, [undefined]>;
2616
+ fill: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
2617
+ minSize: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
2618
+ color: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2619
+ posColor: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2620
+ negColor: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2621
+ summaryScoreMode: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2622
+ rendererTypeNameState: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2623
+ scale: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2624
+ autoscale: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2625
+ displayCrossHatches: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
2626
+ constraints: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").IModelType<{
2627
+ max: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
2628
+ min: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
2629
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>, [undefined]>;
2630
+ configuration: AnyConfigurationSchemaType;
2631
+ } & {
2632
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<"MultiLinearWiggleDisplay">;
2633
+ layout: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").IType<Source[], Source[], Source[]>, [undefined]>;
2634
+ showSidebar: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
2635
+ }, {
2636
+ rendererTypeName: string;
2637
+ error: unknown;
2638
+ statusMessage: string | undefined;
2639
+ } & {
2640
+ readonly RenderingComponent: React.FC<{
2641
+ model: {
2642
+ id: string;
2643
+ type: string;
2644
+ rpcDriverName: string | undefined;
2645
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2646
+ rendererTypeName: string;
2647
+ error: unknown;
2648
+ statusMessage: string | undefined;
2649
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2650
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2651
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2652
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2653
+ }, {
2654
+ rendererTypeName: string;
2655
+ error: unknown;
2656
+ statusMessage: string | undefined;
2657
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2658
+ onHorizontalScroll?: () => void;
2659
+ blockState?: Record<string, any>;
2660
+ }>;
2661
+ readonly DisplayBlurb: React.FC<{
2662
+ model: {
2663
+ id: string;
2664
+ type: string;
2665
+ rpcDriverName: string | undefined;
2666
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2667
+ rendererTypeName: string;
2668
+ error: unknown;
2669
+ statusMessage: string | undefined;
2670
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2671
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2672
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2673
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2674
+ }, {
2675
+ rendererTypeName: string;
2676
+ error: unknown;
2677
+ statusMessage: string | undefined;
2678
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2679
+ }> | null;
2680
+ readonly adapterConfig: any;
2681
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
2682
+ readonly parentDisplay: any;
2683
+ readonly effectiveRpcDriverName: any;
2684
+ } & {
2685
+ renderProps(): any;
2686
+ renderingProps(): {
2687
+ displayModel: {
2688
+ id: string;
2689
+ type: string;
2690
+ rpcDriverName: string | undefined;
2691
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2692
+ rendererTypeName: string;
2693
+ error: unknown;
2694
+ statusMessage: string | undefined;
2695
+ } & {
2696
+ readonly RenderingComponent: React.FC<{
2697
+ model: {
2698
+ id: string;
2699
+ type: string;
2700
+ rpcDriverName: string | undefined;
2701
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2702
+ rendererTypeName: string;
2703
+ error: unknown;
2704
+ statusMessage: string | undefined;
2705
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2706
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2707
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2708
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2709
+ }, {
2710
+ rendererTypeName: string;
2711
+ error: unknown;
2712
+ statusMessage: string | undefined;
2713
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2714
+ onHorizontalScroll?: () => void;
2715
+ blockState?: Record<string, any>;
2716
+ }>;
2717
+ readonly DisplayBlurb: React.FC<{
2718
+ model: {
2719
+ id: string;
2720
+ type: string;
2721
+ rpcDriverName: string | undefined;
2722
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2723
+ rendererTypeName: string;
2724
+ error: unknown;
2725
+ statusMessage: string | undefined;
2726
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2727
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2728
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2729
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2730
+ }, {
2731
+ rendererTypeName: string;
2732
+ error: unknown;
2733
+ statusMessage: string | undefined;
2734
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2735
+ }> | null;
2736
+ readonly adapterConfig: any;
2737
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
2738
+ readonly parentDisplay: any;
2739
+ readonly effectiveRpcDriverName: any;
2740
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2741
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2742
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2743
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2744
+ }, {
2745
+ rendererTypeName: string;
2746
+ error: unknown;
2747
+ statusMessage: string | undefined;
2748
+ } & {
2749
+ readonly RenderingComponent: React.FC<{
2750
+ model: {
2751
+ id: string;
2752
+ type: string;
2753
+ rpcDriverName: string | undefined;
2754
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2755
+ rendererTypeName: string;
2756
+ error: unknown;
2757
+ statusMessage: string | undefined;
2758
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2759
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2760
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2761
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2762
+ }, {
2763
+ rendererTypeName: string;
2764
+ error: unknown;
2765
+ statusMessage: string | undefined;
2766
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2767
+ onHorizontalScroll?: () => void;
2768
+ blockState?: Record<string, any>;
2769
+ }>;
2770
+ readonly DisplayBlurb: React.FC<{
2771
+ model: {
2772
+ id: string;
2773
+ type: string;
2774
+ rpcDriverName: string | undefined;
2775
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2776
+ rendererTypeName: string;
2777
+ error: unknown;
2778
+ statusMessage: string | undefined;
2779
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
2780
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
2781
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2782
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
2783
+ }, {
2784
+ rendererTypeName: string;
2785
+ error: unknown;
2786
+ statusMessage: string | undefined;
2787
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2788
+ }> | null;
2789
+ readonly adapterConfig: any;
2790
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
2791
+ readonly parentDisplay: any;
2792
+ readonly effectiveRpcDriverName: any;
2793
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
2794
+ };
2795
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
2796
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
2797
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
2798
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
2799
+ regionCannotBeRendered(): null;
2800
+ } & {
2801
+ setStatusMessage(arg?: string): void;
2802
+ setError(error?: unknown): void;
2803
+ setRpcDriverName(rpcDriverName: string): void;
2804
+ reload(): void;
2805
+ } & {
2806
+ scrollTop: number;
2807
+ } & {
2808
+ readonly height: number;
2809
+ } & {
2810
+ setScrollTop(scrollTop: number): void;
2811
+ setHeight(displayHeight: number): number;
2812
+ resizeHeight(distance: number): number;
2813
+ } & {
2814
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
2815
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
2816
+ currStatsBpPerPx: number;
2817
+ } & {
2818
+ readonly currentBytesRequested: number;
2819
+ readonly currentFeatureScreenDensity: number;
2820
+ readonly maxFeatureScreenDensity: any;
2821
+ readonly featureDensityStatsReady: boolean;
2822
+ readonly maxAllowableBytes: number;
2823
+ } & {
2824
+ afterAttach(): void;
2825
+ } & {
2826
+ setCurrStatsBpPerPx(n: number): void;
2827
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
2828
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
2829
+ setFeatureDensityStatsP(arg: any): void;
2830
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
2831
+ clearFeatureDensityStats(): void;
2832
+ } & {
2833
+ readonly regionTooLarge: boolean;
2834
+ readonly regionTooLargeReason: string;
2835
+ } & {
2836
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
2837
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
2838
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
2839
+ } & {
2840
+ mouseoverExtraInformation: string | undefined;
2841
+ featureIdUnderMouse: undefined | string;
2842
+ subfeatureIdUnderMouse: undefined | string;
2843
+ contextMenuFeature: undefined | Feature;
2844
+ } & {
2845
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
2846
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
2847
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
2848
+ } & {
2849
+ readonly renderDelay: number;
2850
+ readonly TooltipComponent: AnyReactComponentType;
2851
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
2852
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
2853
+ readonly selectedFeatureId: string | undefined;
2854
+ readonly featureWidgetType: {
2855
+ type: string;
2856
+ id: string;
2857
+ };
2858
+ } & {
2859
+ readonly showTooltipsEnabled: boolean;
2860
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
2861
+ readonly featureUnderMouse: Feature | undefined;
2862
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
2863
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord>;
2864
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
2865
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
2866
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
2867
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util.ts").FeatureLabelData>;
2868
+ } & {
2869
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
2870
+ deleteBlock(key: string): void;
2871
+ selectFeature(feature: Feature): void;
2872
+ navToFeature(feature: Feature): void;
2873
+ clearFeatureSelection(): void;
2874
+ setFeatureIdUnderMouse(feature?: string): void;
2875
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
2876
+ setContextMenuFeature(feature?: Feature): void;
2877
+ setMouseoverExtraInformation(extra?: string): void;
2878
+ setShowLegend(s: boolean): void;
2879
+ setShowTooltips(arg: boolean): void;
2880
+ } & {
2881
+ reload(): Promise<void>;
2882
+ } & {
2883
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
2884
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
2885
+ } & {
2886
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
2887
+ contextMenuItems(): import("@jbrowse/core/ui").MenuItem[];
2888
+ renderingProps(): {
2889
+ displayModel: {
2890
+ id: string;
2891
+ type: string;
2892
+ rpcDriverName: string | undefined;
2893
+ heightPreConfig: number | undefined;
2894
+ userBpPerPxLimit: number | undefined;
2895
+ userByteSizeLimit: number | undefined;
2896
+ blockState: import("@jbrowse/mobx-state-tree").IMSTMap<import("@jbrowse/mobx-state-tree").IModelType<{
2897
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2898
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
2899
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
2900
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
2901
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
2902
+ }, {
2903
+ stopToken: StopToken | undefined;
2904
+ filled: boolean;
2905
+ reactElement: React.ReactElement | undefined;
2906
+ features: Map<string, Feature> | undefined;
2907
+ layout: any;
2908
+ blockStatusMessage: string;
2909
+ error: unknown;
2910
+ message: string | undefined;
2911
+ maxHeightReached: boolean;
2912
+ ReactComponent: ({ model, }: {
2913
+ model: {
2914
+ error?: unknown;
2915
+ reload: () => void;
2916
+ message?: React.ReactNode;
2917
+ statusMessage?: string;
2918
+ reactElement?: React.ReactElement;
2919
+ isRenderingPending?: boolean;
2920
+ };
2921
+ }) => import("react/jsx-runtime").JSX.Element;
2922
+ renderProps: any;
2923
+ renderArgs: Record<string, unknown> | undefined;
2924
+ isRenderingPending: boolean;
2925
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
2926
+ } & {
2927
+ doReload(): void;
2928
+ setStatusMessage(message: string): void;
2929
+ setLoading(newStopToken: StopToken): void;
2930
+ setMessage(messageText: string): void;
2931
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
2932
+ setError(error: unknown): void;
2933
+ reload(): void;
2934
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
2935
+ beforeDestroy(): void;
2936
+ } & {
2937
+ readonly statusMessage: any;
2938
+ } & {
2939
+ afterAttach(): void;
2940
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
2941
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
2942
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
2943
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
2944
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
2945
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
2946
+ }, {
2947
+ stopToken: StopToken | undefined;
2948
+ filled: boolean;
2949
+ reactElement: React.ReactElement | undefined;
2950
+ features: Map<string, Feature> | undefined;
2951
+ layout: any;
2952
+ blockStatusMessage: string;
2953
+ error: unknown;
2954
+ message: string | undefined;
2955
+ maxHeightReached: boolean;
2956
+ ReactComponent: ({ model, }: {
2957
+ model: {
2958
+ error?: unknown;
2959
+ reload: () => void;
2960
+ message?: React.ReactNode;
2961
+ statusMessage?: string;
2962
+ reactElement?: React.ReactElement;
2963
+ isRenderingPending?: boolean;
2964
+ };
2965
+ }) => import("react/jsx-runtime").JSX.Element;
2966
+ renderProps: any;
2967
+ renderArgs: Record<string, unknown> | undefined;
2968
+ isRenderingPending: boolean;
2969
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
2970
+ } & {
2971
+ doReload(): void;
2972
+ setStatusMessage(message: string): void;
2973
+ setLoading(newStopToken: StopToken): void;
2974
+ setMessage(messageText: string): void;
2975
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
2976
+ setError(error: unknown): void;
2977
+ reload(): void;
2978
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
2979
+ beforeDestroy(): void;
2980
+ } & {
2981
+ readonly statusMessage: any;
2982
+ } & {
2983
+ afterAttach(): void;
2984
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
2985
+ configuration: {
2986
+ [x: string]: any;
2987
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2988
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
2989
+ [x: string]: any;
2990
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
2991
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
2992
+ [x: string]: any;
2993
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
2994
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
2995
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
2996
+ maxFeatureScreenDensity: {
2997
+ type: string;
2998
+ description: string;
2999
+ defaultValue: number;
3000
+ };
3001
+ fetchSizeLimit: {
3002
+ type: string;
3003
+ defaultValue: number;
3004
+ description: string;
3005
+ };
3006
+ height: {
3007
+ type: string;
3008
+ defaultValue: number;
3009
+ description: string;
3010
+ };
3011
+ mouseover: {
3012
+ type: string;
3013
+ description: string;
3014
+ defaultValue: string;
3015
+ contextVariable: string[];
3016
+ };
3017
+ jexlFilters: {
3018
+ type: string;
3019
+ description: string;
3020
+ defaultValue: never[];
3021
+ };
3022
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>>;
3023
+ showLegend: boolean | undefined;
3024
+ showTooltips: boolean | undefined;
3025
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3026
+ rendererTypeName: string;
3027
+ error: unknown;
3028
+ statusMessage: string | undefined;
3029
+ } & {
3030
+ readonly RenderingComponent: React.FC<{
3031
+ model: {
3032
+ id: string;
3033
+ type: string;
3034
+ rpcDriverName: string | undefined;
3035
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3036
+ rendererTypeName: string;
3037
+ error: unknown;
3038
+ statusMessage: string | undefined;
3039
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3040
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3041
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3042
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3043
+ }, {
3044
+ rendererTypeName: string;
3045
+ error: unknown;
3046
+ statusMessage: string | undefined;
3047
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3048
+ onHorizontalScroll?: () => void;
3049
+ blockState?: Record<string, any>;
3050
+ }>;
3051
+ readonly DisplayBlurb: React.FC<{
3052
+ model: {
3053
+ id: string;
3054
+ type: string;
3055
+ rpcDriverName: string | undefined;
3056
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3057
+ rendererTypeName: string;
3058
+ error: unknown;
3059
+ statusMessage: string | undefined;
3060
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3061
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3062
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3063
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3064
+ }, {
3065
+ rendererTypeName: string;
3066
+ error: unknown;
3067
+ statusMessage: string | undefined;
3068
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3069
+ }> | null;
3070
+ readonly adapterConfig: any;
3071
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
3072
+ readonly parentDisplay: any;
3073
+ readonly effectiveRpcDriverName: any;
3074
+ } & {
3075
+ renderProps(): any;
3076
+ renderingProps(): {
3077
+ displayModel: {
3078
+ id: string;
3079
+ type: string;
3080
+ rpcDriverName: string | undefined;
3081
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3082
+ rendererTypeName: string;
3083
+ error: unknown;
3084
+ statusMessage: string | undefined;
3085
+ } & {
3086
+ readonly RenderingComponent: React.FC<{
3087
+ model: {
3088
+ id: string;
3089
+ type: string;
3090
+ rpcDriverName: string | undefined;
3091
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3092
+ rendererTypeName: string;
3093
+ error: unknown;
3094
+ statusMessage: string | undefined;
3095
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3096
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3097
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3098
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3099
+ }, {
3100
+ rendererTypeName: string;
3101
+ error: unknown;
3102
+ statusMessage: string | undefined;
3103
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3104
+ onHorizontalScroll?: () => void;
3105
+ blockState?: Record<string, any>;
3106
+ }>;
3107
+ readonly DisplayBlurb: React.FC<{
3108
+ model: {
3109
+ id: string;
3110
+ type: string;
3111
+ rpcDriverName: string | undefined;
3112
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3113
+ rendererTypeName: string;
3114
+ error: unknown;
3115
+ statusMessage: string | undefined;
3116
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3117
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3118
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3119
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3120
+ }, {
3121
+ rendererTypeName: string;
3122
+ error: unknown;
3123
+ statusMessage: string | undefined;
3124
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3125
+ }> | null;
3126
+ readonly adapterConfig: any;
3127
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
3128
+ readonly parentDisplay: any;
3129
+ readonly effectiveRpcDriverName: any;
3130
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3131
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3132
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3133
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3134
+ }, {
3135
+ rendererTypeName: string;
3136
+ error: unknown;
3137
+ statusMessage: string | undefined;
3138
+ } & {
3139
+ readonly RenderingComponent: React.FC<{
3140
+ model: {
3141
+ id: string;
3142
+ type: string;
3143
+ rpcDriverName: string | undefined;
3144
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3145
+ rendererTypeName: string;
3146
+ error: unknown;
3147
+ statusMessage: string | undefined;
3148
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3149
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3150
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3151
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3152
+ }, {
3153
+ rendererTypeName: string;
3154
+ error: unknown;
3155
+ statusMessage: string | undefined;
3156
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3157
+ onHorizontalScroll?: () => void;
3158
+ blockState?: Record<string, any>;
3159
+ }>;
3160
+ readonly DisplayBlurb: React.FC<{
3161
+ model: {
3162
+ id: string;
3163
+ type: string;
3164
+ rpcDriverName: string | undefined;
3165
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3166
+ rendererTypeName: string;
3167
+ error: unknown;
3168
+ statusMessage: string | undefined;
3169
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3170
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3171
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3172
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3173
+ }, {
3174
+ rendererTypeName: string;
3175
+ error: unknown;
3176
+ statusMessage: string | undefined;
3177
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3178
+ }> | null;
3179
+ readonly adapterConfig: any;
3180
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
3181
+ readonly parentDisplay: any;
3182
+ readonly effectiveRpcDriverName: any;
3183
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3184
+ };
3185
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
3186
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
3187
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
3188
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
3189
+ regionCannotBeRendered(): null;
3190
+ } & {
3191
+ setStatusMessage(arg?: string): void;
3192
+ setError(error?: unknown): void;
3193
+ setRpcDriverName(rpcDriverName: string): void;
3194
+ reload(): void;
3195
+ } & {
3196
+ scrollTop: number;
3197
+ } & {
3198
+ readonly height: number;
3199
+ } & {
3200
+ setScrollTop(scrollTop: number): void;
3201
+ setHeight(displayHeight: number): number;
3202
+ resizeHeight(distance: number): number;
3203
+ } & {
3204
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
3205
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
3206
+ currStatsBpPerPx: number;
3207
+ } & {
3208
+ readonly currentBytesRequested: number;
3209
+ readonly currentFeatureScreenDensity: number;
3210
+ readonly maxFeatureScreenDensity: any;
3211
+ readonly featureDensityStatsReady: boolean;
3212
+ readonly maxAllowableBytes: number;
3213
+ } & {
3214
+ afterAttach(): void;
3215
+ } & {
3216
+ setCurrStatsBpPerPx(n: number): void;
3217
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
3218
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
3219
+ setFeatureDensityStatsP(arg: any): void;
3220
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
3221
+ clearFeatureDensityStats(): void;
3222
+ } & {
3223
+ readonly regionTooLarge: boolean;
3224
+ readonly regionTooLargeReason: string;
3225
+ } & {
3226
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
3227
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
3228
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
3229
+ } & {
3230
+ mouseoverExtraInformation: string | undefined;
3231
+ featureIdUnderMouse: undefined | string;
3232
+ subfeatureIdUnderMouse: undefined | string;
3233
+ contextMenuFeature: undefined | Feature;
3234
+ } & {
3235
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
3236
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
3237
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
3238
+ } & {
3239
+ readonly renderDelay: number;
3240
+ readonly TooltipComponent: AnyReactComponentType;
3241
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
3242
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
3243
+ readonly selectedFeatureId: string | undefined;
3244
+ readonly featureWidgetType: {
3245
+ type: string;
3246
+ id: string;
3247
+ };
3248
+ } & {
3249
+ readonly showTooltipsEnabled: boolean;
3250
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
3251
+ readonly featureUnderMouse: Feature | undefined;
3252
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
3253
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord>;
3254
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
3255
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
3256
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
3257
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util.ts").FeatureLabelData>;
3258
+ } & {
3259
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
3260
+ deleteBlock(key: string): void;
3261
+ selectFeature(feature: Feature): void;
3262
+ navToFeature(feature: Feature): void;
3263
+ clearFeatureSelection(): void;
3264
+ setFeatureIdUnderMouse(feature?: string): void;
3265
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
3266
+ setContextMenuFeature(feature?: Feature): void;
3267
+ setMouseoverExtraInformation(extra?: string): void;
3268
+ setShowLegend(s: boolean): void;
3269
+ setShowTooltips(arg: boolean): void;
3270
+ } & {
3271
+ reload(): Promise<void>;
3272
+ } & {
3273
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
3274
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
3275
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3276
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3277
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3278
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3279
+ } & {
3280
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3281
+ } & {
3282
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3283
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3284
+ } & {
3285
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
3286
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3287
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
3288
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
3289
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
3290
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
3291
+ }, {
3292
+ stopToken: StopToken | undefined;
3293
+ filled: boolean;
3294
+ reactElement: React.ReactElement | undefined;
3295
+ features: Map<string, Feature> | undefined;
3296
+ layout: any;
3297
+ blockStatusMessage: string;
3298
+ error: unknown;
3299
+ message: string | undefined;
3300
+ maxHeightReached: boolean;
3301
+ ReactComponent: ({ model, }: {
3302
+ model: {
3303
+ error?: unknown;
3304
+ reload: () => void;
3305
+ message?: React.ReactNode;
3306
+ statusMessage?: string;
3307
+ reactElement?: React.ReactElement;
3308
+ isRenderingPending?: boolean;
3309
+ };
3310
+ }) => import("react/jsx-runtime").JSX.Element;
3311
+ renderProps: any;
3312
+ renderArgs: Record<string, unknown> | undefined;
3313
+ isRenderingPending: boolean;
3314
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
3315
+ } & {
3316
+ doReload(): void;
3317
+ setStatusMessage(message: string): void;
3318
+ setLoading(newStopToken: StopToken): void;
3319
+ setMessage(messageText: string): void;
3320
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
3321
+ setError(error: unknown): void;
3322
+ reload(): void;
3323
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
3324
+ beforeDestroy(): void;
3325
+ } & {
3326
+ readonly statusMessage: any;
3327
+ } & {
3328
+ afterAttach(): void;
3329
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3330
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
3331
+ maxFeatureScreenDensity: {
3332
+ type: string;
3333
+ description: string;
3334
+ defaultValue: number;
3335
+ };
3336
+ fetchSizeLimit: {
3337
+ type: string;
3338
+ defaultValue: number;
3339
+ description: string;
3340
+ };
3341
+ height: {
3342
+ type: string;
3343
+ defaultValue: number;
3344
+ description: string;
3345
+ };
3346
+ mouseover: {
3347
+ type: string;
3348
+ description: string;
3349
+ defaultValue: string;
3350
+ contextVariable: string[];
3351
+ };
3352
+ jexlFilters: {
3353
+ type: string;
3354
+ description: string;
3355
+ defaultValue: never[];
3356
+ };
3357
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
3358
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
3359
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
3360
+ }, {
3361
+ rendererTypeName: string;
3362
+ error: unknown;
3363
+ statusMessage: string | undefined;
3364
+ } & {
3365
+ readonly RenderingComponent: React.FC<{
3366
+ model: {
3367
+ id: string;
3368
+ type: string;
3369
+ rpcDriverName: string | undefined;
3370
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3371
+ rendererTypeName: string;
3372
+ error: unknown;
3373
+ statusMessage: string | undefined;
3374
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3375
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3376
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3377
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3378
+ }, {
3379
+ rendererTypeName: string;
3380
+ error: unknown;
3381
+ statusMessage: string | undefined;
3382
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3383
+ onHorizontalScroll?: () => void;
3384
+ blockState?: Record<string, any>;
3385
+ }>;
3386
+ readonly DisplayBlurb: React.FC<{
3387
+ model: {
3388
+ id: string;
3389
+ type: string;
3390
+ rpcDriverName: string | undefined;
3391
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3392
+ rendererTypeName: string;
3393
+ error: unknown;
3394
+ statusMessage: string | undefined;
3395
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3396
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3397
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3398
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3399
+ }, {
3400
+ rendererTypeName: string;
3401
+ error: unknown;
3402
+ statusMessage: string | undefined;
3403
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3404
+ }> | null;
3405
+ readonly adapterConfig: any;
3406
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
3407
+ readonly parentDisplay: any;
3408
+ readonly effectiveRpcDriverName: any;
3409
+ } & {
3410
+ renderProps(): any;
3411
+ renderingProps(): {
3412
+ displayModel: {
3413
+ id: string;
3414
+ type: string;
3415
+ rpcDriverName: string | undefined;
3416
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3417
+ rendererTypeName: string;
3418
+ error: unknown;
3419
+ statusMessage: string | undefined;
3420
+ } & {
3421
+ readonly RenderingComponent: React.FC<{
3422
+ model: {
3423
+ id: string;
3424
+ type: string;
3425
+ rpcDriverName: string | undefined;
3426
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3427
+ rendererTypeName: string;
3428
+ error: unknown;
3429
+ statusMessage: string | undefined;
3430
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3431
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3432
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3433
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3434
+ }, {
3435
+ rendererTypeName: string;
3436
+ error: unknown;
3437
+ statusMessage: string | undefined;
3438
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3439
+ onHorizontalScroll?: () => void;
3440
+ blockState?: Record<string, any>;
3441
+ }>;
3442
+ readonly DisplayBlurb: React.FC<{
3443
+ model: {
3444
+ id: string;
3445
+ type: string;
3446
+ rpcDriverName: string | undefined;
3447
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3448
+ rendererTypeName: string;
3449
+ error: unknown;
3450
+ statusMessage: string | undefined;
3451
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3452
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3453
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3454
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3455
+ }, {
3456
+ rendererTypeName: string;
3457
+ error: unknown;
3458
+ statusMessage: string | undefined;
3459
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3460
+ }> | null;
3461
+ readonly adapterConfig: any;
3462
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
3463
+ readonly parentDisplay: any;
3464
+ readonly effectiveRpcDriverName: any;
3465
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3466
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3467
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3468
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3469
+ }, {
3470
+ rendererTypeName: string;
3471
+ error: unknown;
3472
+ statusMessage: string | undefined;
3473
+ } & {
3474
+ readonly RenderingComponent: React.FC<{
3475
+ model: {
3476
+ id: string;
3477
+ type: string;
3478
+ rpcDriverName: string | undefined;
3479
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3480
+ rendererTypeName: string;
3481
+ error: unknown;
3482
+ statusMessage: string | undefined;
3483
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3484
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3485
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3486
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3487
+ }, {
3488
+ rendererTypeName: string;
3489
+ error: unknown;
3490
+ statusMessage: string | undefined;
3491
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3492
+ onHorizontalScroll?: () => void;
3493
+ blockState?: Record<string, any>;
3494
+ }>;
3495
+ readonly DisplayBlurb: React.FC<{
3496
+ model: {
3497
+ id: string;
3498
+ type: string;
3499
+ rpcDriverName: string | undefined;
3500
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
3501
+ rendererTypeName: string;
3502
+ error: unknown;
3503
+ statusMessage: string | undefined;
3504
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
3505
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3506
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3507
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3508
+ }, {
3509
+ rendererTypeName: string;
3510
+ error: unknown;
3511
+ statusMessage: string | undefined;
3512
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3513
+ }> | null;
3514
+ readonly adapterConfig: any;
3515
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
3516
+ readonly parentDisplay: any;
3517
+ readonly effectiveRpcDriverName: any;
3518
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3519
+ };
3520
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
3521
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
3522
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
3523
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
3524
+ regionCannotBeRendered(): null;
3525
+ } & {
3526
+ setStatusMessage(arg?: string): void;
3527
+ setError(error?: unknown): void;
3528
+ setRpcDriverName(rpcDriverName: string): void;
3529
+ reload(): void;
3530
+ } & {
3531
+ scrollTop: number;
3532
+ } & {
3533
+ readonly height: number;
3534
+ } & {
3535
+ setScrollTop(scrollTop: number): void;
3536
+ setHeight(displayHeight: number): number;
3537
+ resizeHeight(distance: number): number;
3538
+ } & {
3539
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
3540
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
3541
+ currStatsBpPerPx: number;
3542
+ } & {
3543
+ readonly currentBytesRequested: number;
3544
+ readonly currentFeatureScreenDensity: number;
3545
+ readonly maxFeatureScreenDensity: any;
3546
+ readonly featureDensityStatsReady: boolean;
3547
+ readonly maxAllowableBytes: number;
3548
+ } & {
3549
+ afterAttach(): void;
3550
+ } & {
3551
+ setCurrStatsBpPerPx(n: number): void;
3552
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
3553
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
3554
+ setFeatureDensityStatsP(arg: any): void;
3555
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
3556
+ clearFeatureDensityStats(): void;
3557
+ } & {
3558
+ readonly regionTooLarge: boolean;
3559
+ readonly regionTooLargeReason: string;
3560
+ } & {
3561
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
3562
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
3563
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
3564
+ } & {
3565
+ mouseoverExtraInformation: string | undefined;
3566
+ featureIdUnderMouse: undefined | string;
3567
+ subfeatureIdUnderMouse: undefined | string;
3568
+ contextMenuFeature: undefined | Feature;
3569
+ } & {
3570
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
3571
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
3572
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
3573
+ } & {
3574
+ readonly renderDelay: number;
3575
+ readonly TooltipComponent: AnyReactComponentType;
3576
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
3577
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
3578
+ readonly selectedFeatureId: string | undefined;
3579
+ readonly featureWidgetType: {
3580
+ type: string;
3581
+ id: string;
3582
+ };
3583
+ } & {
3584
+ readonly showTooltipsEnabled: boolean;
3585
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
3586
+ readonly featureUnderMouse: Feature | undefined;
3587
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
3588
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord>;
3589
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
3590
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
3591
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types.ts").LayoutRecord | undefined;
3592
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util.ts").FeatureLabelData>;
3593
+ } & {
3594
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
3595
+ deleteBlock(key: string): void;
3596
+ selectFeature(feature: Feature): void;
3597
+ navToFeature(feature: Feature): void;
3598
+ clearFeatureSelection(): void;
3599
+ setFeatureIdUnderMouse(feature?: string): void;
3600
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
3601
+ setContextMenuFeature(feature?: Feature): void;
3602
+ setMouseoverExtraInformation(extra?: string): void;
3603
+ setShowLegend(s: boolean): void;
3604
+ setShowTooltips(arg: boolean): void;
3605
+ } & {
3606
+ reload(): Promise<void>;
3607
+ } & {
3608
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
3609
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
3610
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3611
+ onMouseMove(_: unknown, featureId?: string): void;
3612
+ onMouseLeave(_: unknown): void;
3613
+ onContextMenu(_: unknown): void;
3614
+ };
3615
+ renderProps(): any;
3616
+ } & {
3617
+ renderSvg(opts: ExportSvgDisplayOptions): Promise<import("react/jsx-runtime").JSX.Element>;
3618
+ afterAttach(): void;
3619
+ } & {
3620
+ message: undefined | string;
3621
+ stats: {
3622
+ currStatsBpPerPx: number;
3623
+ scoreMin: number;
3624
+ scoreMax: number;
3625
+ statsRegion?: string;
3626
+ } | undefined;
3627
+ statsFetchInProgress: undefined | StopToken;
3628
+ } & {
3629
+ updateQuantitativeStats(stats: {
3630
+ currStatsBpPerPx: number;
3631
+ scoreMin: number;
3632
+ scoreMax: number;
3633
+ }, statsRegion?: string): void;
3634
+ setColor(color?: string): void;
3635
+ setPosColor(color?: string): void;
3636
+ setNegColor(color?: string): void;
3637
+ setStatsLoading(arg?: StopToken): void;
3638
+ selectFeature(feature: Feature): void;
3639
+ setResolution(res: number): void;
3640
+ setFill(fill: number): void;
3641
+ toggleLogScale(): void;
3642
+ setScaleType(scale?: string): void;
3643
+ setSummaryScoreMode(val: string): void;
3644
+ setAutoscale(val: string): void;
3645
+ setMaxScore(val?: number): void;
3646
+ setRendererType(val: string): void;
3647
+ setMinScore(val?: number): void;
3648
+ toggleCrossHatches(): void;
3649
+ setCrossHatches(cross: boolean): void;
3650
+ } & {
3651
+ readonly adapterTypeName: any;
3652
+ readonly rendererTypeNameSimple: string;
3653
+ readonly filters: undefined;
3654
+ readonly scaleType: string;
3655
+ readonly maxScore: number;
3656
+ readonly minScore: number;
3657
+ } & {
3658
+ readonly adapterCapabilities: string[];
3659
+ readonly rendererConfig: any;
3660
+ readonly autoscaleType: string;
3661
+ } & {
3662
+ readonly domain: number[] | undefined;
3663
+ } & {
3664
+ readonly filled: boolean;
3665
+ readonly summaryScoreModeSetting: string;
3666
+ readonly scaleOpts: {
3667
+ domain: number[] | undefined;
3668
+ stats: {
3669
+ currStatsBpPerPx: number;
3670
+ scoreMin: number;
3671
+ scoreMax: number;
3672
+ statsRegion?: string;
3673
+ } | undefined;
3674
+ autoscaleType: string;
3675
+ scaleType: string;
3676
+ inverted: boolean;
3677
+ };
3678
+ readonly canHaveFill: boolean;
3679
+ readonly displayCrossHatchesSetting: boolean;
3680
+ readonly hasResolution: boolean;
3681
+ readonly hasGlobalStats: boolean;
3682
+ } & {
3683
+ scoreTrackMenuItems(): ({
3684
+ label: string;
3685
+ subMenu: {
3686
+ label: string;
3687
+ onClick: () => void;
3688
+ }[];
3689
+ onClick?: undefined;
3690
+ } | {
3691
+ label: string;
3692
+ subMenu: {
3693
+ label: string;
3694
+ type: string;
3695
+ checked: boolean;
3696
+ onClick: () => void;
3697
+ }[];
3698
+ onClick?: undefined;
3699
+ } | {
3700
+ label: string;
3701
+ onClick: () => void;
3702
+ subMenu?: undefined;
3703
+ })[];
3704
+ } & {
3705
+ reload(): Promise<void>;
3706
+ } & {
3707
+ sourcesLoadingStopToken: StopToken | undefined;
3708
+ featureUnderMouseVolatile: Feature | undefined;
3709
+ sourcesVolatile: Source[] | undefined;
3710
+ } & {
3711
+ setShowSidebar(arg: boolean): void;
3712
+ setSourcesLoading(str: StopToken): void;
3713
+ setLayout(layout: Source[]): void;
3714
+ clearLayout(): void;
3715
+ setSources(sources: Source[]): void;
3716
+ setFeatureUnderMouse(f?: Feature): void;
3717
+ } & {
3718
+ readonly featureUnderMouse: Feature | undefined;
3719
+ readonly TooltipComponent: AnyReactComponentType;
3720
+ readonly rendererTypeName: string;
3721
+ } & {
3722
+ readonly graphType: boolean;
3723
+ readonly needsFullHeightScalebar: boolean;
3724
+ readonly isMultiRow: boolean;
3725
+ readonly canHaveFill: boolean;
3726
+ readonly needsCustomLegend: boolean;
3727
+ readonly renderColorBoxes: boolean;
3728
+ readonly prefersOffset: boolean;
3729
+ readonly sourcesWithoutLayout: {
3730
+ color: string;
3731
+ baseUri?: string;
3732
+ name: string;
3733
+ source: string;
3734
+ group?: string;
3735
+ }[] | undefined;
3736
+ readonly sources: {
3737
+ color: string;
3738
+ baseUri?: string;
3739
+ name: string;
3740
+ source: string;
3741
+ group?: string;
3742
+ }[] | undefined;
3743
+ readonly quantitativeStatsReady: boolean;
3744
+ } & {
3745
+ readonly rowHeight: number;
3746
+ readonly rowHeightTooSmallForScalebar: boolean;
3747
+ readonly useMinimalTicks: boolean;
3748
+ } & {
3749
+ adapterProps(): any;
3750
+ readonly ticks: {
3751
+ range: number[];
3752
+ values: number[];
3753
+ format: (d: import("d3-scale").NumberValue) => string;
3754
+ position: import("d3-scale").ScaleLinear<number, number, never> | import("d3-scale").ScaleQuantize<number, never>;
3755
+ } | undefined;
3756
+ readonly colors: string[];
3757
+ readonly quantitativeStatsRelevantToCurrentZoom: boolean;
3758
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, {
3759
+ id: string;
3760
+ type: string;
3761
+ rpcDriverName: string | undefined;
3762
+ heightPreConfig: number | undefined;
3763
+ userBpPerPxLimit: number | undefined;
3764
+ userByteSizeLimit: number | undefined;
3765
+ blockState: import("mobx").IKeyValueMap<import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
3766
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3767
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
3768
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
3769
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
3770
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
3771
+ }>>;
3772
+ configuration: import("@jbrowse/mobx-state-tree").ModelSnapshotType<Record<string, any>>;
3773
+ showLegend: boolean | undefined;
3774
+ showTooltips: boolean | undefined;
3775
+ selectedRendering: string;
3776
+ resolution: number;
3777
+ fill: boolean | undefined;
3778
+ minSize: number | undefined;
3779
+ color: string | undefined;
3780
+ posColor: string | undefined;
3781
+ negColor: string | undefined;
3782
+ summaryScoreMode: string | undefined;
3783
+ rendererTypeNameState: string | undefined;
3784
+ scale: string | undefined;
3785
+ autoscale: string | undefined;
3786
+ displayCrossHatches: boolean | undefined;
3787
+ constraints: import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
3788
+ max: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3789
+ min: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3790
+ }>;
3791
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3792
+ };
382
3793
  readonly hasResolution: boolean;
383
3794
  readonly hasGlobalStats: boolean;
384
- readonly fillSetting: 2 | 1 | 0;
3795
+ readonly fillSetting: 0 | 1 | 2;
385
3796
  } & {
386
3797
  trackMenuItems(): (import("@jbrowse/core/ui").MenuDivider | import("@jbrowse/core/ui").MenuSubHeader | import("@jbrowse/core/ui").NormalMenuItem | import("@jbrowse/core/ui").CheckboxMenuItem | import("@jbrowse/core/ui").RadioMenuItem | import("@jbrowse/core/ui").SubMenuItem | {
3798
+ label: string;
3799
+ icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
3800
+ muiName: string;
3801
+ };
3802
+ subMenu: {
3803
+ label: string;
3804
+ type: string;
3805
+ checked: boolean;
3806
+ onClick: () => void;
3807
+ }[];
3808
+ type?: undefined;
3809
+ checked?: undefined;
3810
+ onClick?: undefined;
3811
+ } | {
387
3812
  label: string;
388
3813
  subMenu: ({
389
3814
  label: string;
@@ -406,6 +3831,7 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
406
3831
  onClick: () => void;
407
3832
  subMenu?: undefined;
408
3833
  })[];
3834
+ icon?: undefined;
409
3835
  type?: undefined;
410
3836
  checked?: undefined;
411
3837
  onClick?: undefined;
@@ -417,6 +3843,7 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
417
3843
  checked: boolean;
418
3844
  onClick: () => void;
419
3845
  }[];
3846
+ icon?: undefined;
420
3847
  type?: undefined;
421
3848
  checked?: undefined;
422
3849
  onClick?: undefined;
@@ -425,12 +3852,120 @@ export declare function stateModelFactory(_pluginManager: PluginManager, configS
425
3852
  label: string;
426
3853
  checked: boolean;
427
3854
  onClick: () => void;
3855
+ icon?: undefined;
428
3856
  subMenu?: undefined;
429
3857
  })[];
430
3858
  } & {
431
3859
  afterAttach(): void;
432
3860
  renderSvg(opts: ExportSvgDisplayOptions): Promise<import("react/jsx-runtime").JSX.Element>;
433
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
3861
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
3862
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3863
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3864
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3865
+ } & {
3866
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3867
+ } & {
3868
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3869
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3870
+ } & {
3871
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
3872
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
3873
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
3874
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
3875
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
3876
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
3877
+ }, {
3878
+ stopToken: StopToken | undefined;
3879
+ filled: boolean;
3880
+ reactElement: React.ReactElement | undefined;
3881
+ features: Map<string, Feature> | undefined;
3882
+ layout: any;
3883
+ blockStatusMessage: string;
3884
+ error: unknown;
3885
+ message: string | undefined;
3886
+ maxHeightReached: boolean;
3887
+ ReactComponent: ({ model, }: {
3888
+ model: {
3889
+ error?: unknown;
3890
+ reload: () => void;
3891
+ message?: React.ReactNode;
3892
+ statusMessage?: string;
3893
+ reactElement?: React.ReactElement;
3894
+ isRenderingPending?: boolean;
3895
+ };
3896
+ }) => import("react/jsx-runtime").JSX.Element;
3897
+ renderProps: any;
3898
+ renderArgs: Record<string, unknown> | undefined;
3899
+ isRenderingPending: boolean;
3900
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
3901
+ } & {
3902
+ doReload(): void;
3903
+ setStatusMessage(message: string): void;
3904
+ setLoading(newStopToken: StopToken): void;
3905
+ setMessage(messageText: string): void;
3906
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
3907
+ setError(error: unknown): void;
3908
+ reload(): void;
3909
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
3910
+ beforeDestroy(): void;
3911
+ } & {
3912
+ readonly statusMessage: any;
3913
+ } & {
3914
+ afterAttach(): void;
3915
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
3916
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
3917
+ maxFeatureScreenDensity: {
3918
+ type: string;
3919
+ description: string;
3920
+ defaultValue: number;
3921
+ };
3922
+ fetchSizeLimit: {
3923
+ type: string;
3924
+ defaultValue: number;
3925
+ description: string;
3926
+ };
3927
+ height: {
3928
+ type: string;
3929
+ defaultValue: number;
3930
+ description: string;
3931
+ };
3932
+ mouseover: {
3933
+ type: string;
3934
+ description: string;
3935
+ defaultValue: string;
3936
+ contextVariable: string[];
3937
+ };
3938
+ jexlFilters: {
3939
+ type: string;
3940
+ description: string;
3941
+ defaultValue: never[];
3942
+ };
3943
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
3944
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
3945
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
3946
+ } & {
3947
+ selectedRendering: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
3948
+ resolution: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<number>, [undefined]>;
3949
+ fill: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
3950
+ minSize: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3951
+ color: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3952
+ posColor: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3953
+ negColor: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3954
+ summaryScoreMode: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3955
+ rendererTypeNameState: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3956
+ scale: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3957
+ autoscale: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
3958
+ displayCrossHatches: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
3959
+ constraints: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").IModelType<{
3960
+ max: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3961
+ min: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
3962
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>, [undefined]>;
3963
+ configuration: AnyConfigurationSchemaType;
3964
+ } & {
3965
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<"MultiLinearWiggleDisplay">;
3966
+ layout: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").IType<Source[], Source[], Source[]>, [undefined]>;
3967
+ showSidebar: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
3968
+ }>>;
434
3969
  export type WiggleDisplayStateModel = ReturnType<typeof stateModelFactory>;
435
3970
  export type WiggleDisplayModel = Instance<WiggleDisplayStateModel>;
436
3971
  export default stateModelFactory;