@jbrowse/plugin-wiggle 3.6.5 → 4.0.0

package/dist/MultiWiggleRendering.d.ts

@@ -1,19 +0,0 @@
-import type { Source } from './util';
-import type { Feature } from '@jbrowse/core/util';
-import type { Region } from '@jbrowse/core/util/types';
-declare const MultiWiggleRendering: (props: {
-    regions: Region[];
-    features: Map<string, Feature>;
-    bpPerPx: number;
-    width: number;
-    height: number;
-    blockKey: string;
-    sources: Source[];
-    displayModel?: {
-        isMultiRow: boolean;
-    };
-    onMouseLeave?: (event: React.MouseEvent) => void;
-    onMouseMove?: (event: React.MouseEvent, arg?: Feature) => void;
-    onFeatureClick?: (event: React.MouseEvent, arg?: Feature) => void;
-}) => import("react/jsx-runtime").JSX.Element;
-export default MultiWiggleRendering;

package/dist/MultiWiggleRendering.js

@@ -1,81 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-const jsx_runtime_1 = require("react/jsx-runtime");
-const react_1 = require("react");
-const ui_1 = require("@jbrowse/core/ui");
-const util_1 = require("@jbrowse/core/util");
-const mobx_react_1 = require("mobx-react");
-const MultiWiggleRendering = (0, mobx_react_1.observer)(function (props) {
-    const { regions, features, bpPerPx, width, height, sources, onMouseLeave = () => { }, onMouseMove = () => { }, onFeatureClick = () => { }, displayModel, } = props;
-    const region = regions[0];
-    const ref = (0, react_1.useRef)(null);
-    const { isMultiRow } = displayModel || {};
-    function getFeatureUnderMouse(eventClientX, eventClientY) {
-        if (!ref.current) {
-            return;
-        }
-        const rect = ref.current.getBoundingClientRect();
-        const offsetX = eventClientX - rect.left;
-        const offsetY = eventClientY - rect.top;
-        const source = sources[Math.floor((offsetY / height) * sources.length)];
-        if (!source) {
-            return;
-        }
-        const px = region.reversed ? width - offsetX : offsetX;
-        const mouseoverBp = region.start + bpPerPx * px;
-        let featureUnderMouse;
-        if (isMultiRow) {
-            for (const feature of features.values()) {
-                if (feature.get('source') !== source.name) {
-                    continue;
-                }
-                if (mouseoverBp <= feature.get('end') + bpPerPx &&
-                    mouseoverBp >= feature.get('start')) {
-                    featureUnderMouse = feature;
-                    break;
-                }
-            }
-        }
-        else {
-            const featuresUnderMouse = [];
-            for (const feature of features.values()) {
-                if (mouseoverBp <= feature.get('end') + bpPerPx &&
-                    mouseoverBp >= feature.get('start')) {
-                    featuresUnderMouse.push(feature);
-                }
-            }
-            if (featuresUnderMouse.length) {
-                const pos = Math.floor(mouseoverBp);
-                featureUnderMouse = new util_1.SimpleFeature({
-                    uniqueId: 'mouseoverfeat',
-                    sources: Object.fromEntries(featuresUnderMouse
-                        .map(f => f.toJSON())
-                        .map(f => {
-                        const { refName, start, end, source, ...rest } = f;
-                        return [source, rest];
-                    })),
-                    ...region,
-                    start: pos,
-                    end: pos + 1,
-                });
-            }
-        }
-        return featureUnderMouse;
-    }
-    return ((0, jsx_runtime_1.jsx)("div", { ref: ref, onMouseMove: event => {
-            const { clientX, clientY } = event;
-            const featureUnderMouse = getFeatureUnderMouse(clientX, clientY);
-            onMouseMove(event, featureUnderMouse);
-        }, onClick: event => {
-            const { clientX, clientY } = event;
-            const featureUnderMouse = getFeatureUnderMouse(clientX, clientY);
-            onFeatureClick(event, featureUnderMouse);
-        }, onMouseLeave: event => {
-            onMouseLeave(event);
-        }, style: {
-            overflow: 'visible',
-            position: 'relative',
-            height,
-        }, children: (0, jsx_runtime_1.jsx)(ui_1.PrerenderedCanvas, { ...props }) }));
-});
-exports.default = MultiWiggleRendering;

package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts

@@ -1,8 +0,0 @@
-import WiggleBaseRenderer from '../WiggleBaseRenderer';
-import type { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
-import type { Feature } from '@jbrowse/core/util';
-export default class MultiXYPlotRenderer extends WiggleBaseRenderer {
-    draw(ctx: CanvasRenderingContext2D, props: MultiArgs): Promise<{
-        reducedFeatures: Feature[];
-    }>;
-}

package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js

@@ -1,61 +0,0 @@
-"use strict";
-var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    var desc = Object.getOwnPropertyDescriptor(m, k);
-    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
-      desc = { enumerable: true, get: function() { return m[k]; } };
-    }
-    Object.defineProperty(o, k2, desc);
-}) : (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    o[k2] = m[k];
-}));
-var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
-    Object.defineProperty(o, "default", { enumerable: true, value: v });
-}) : function(o, v) {
-    o["default"] = v;
-});
-var __importStar = (this && this.__importStar) || (function () {
-    var ownKeys = function(o) {
-        ownKeys = Object.getOwnPropertyNames || function (o) {
-            var ar = [];
-            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
-            return ar;
-        };
-        return ownKeys(o);
-    };
-    return function (mod) {
-        if (mod && mod.__esModule) return mod;
-        var result = {};
-        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
-        __setModuleDefault(result, mod);
-        return result;
-    };
-})();
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-const util_1 = require("@jbrowse/core/util");
-const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
-const util_2 = require("../util");
-class MultiXYPlotRenderer extends WiggleBaseRenderer_1.default {
-    async draw(ctx, props) {
-        const { stopToken, sources, features } = props;
-        const groups = (0, util_1.groupBy)(features.values(), f => f.get('source'));
-        const { drawXY } = await Promise.resolve().then(() => __importStar(require('../drawXY')));
-        let feats = [];
-        (0, util_1.forEachWithStopTokenCheck)(sources, stopToken, source => {
-            const features = groups[source.name] || [];
-            const { reducedFeatures } = drawXY(ctx, {
-                ...props,
-                features,
-                offset: util_2.YSCALEBAR_LABEL_OFFSET,
-                colorCallback: () => source.color || 'blue',
-            });
-            feats = feats.concat(reducedFeatures);
-        });
-        return { reducedFeatures: feats };
-    }
-}
-exports.default = MultiXYPlotRenderer;

package/dist/MultiXYPlotRenderer/configSchema.d.ts

@@ -1,57 +0,0 @@
-declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    filled: {
-        type: string;
-        defaultValue: boolean;
-    };
-    displayCrossHatches: {
-        type: string;
-        description: string;
-        defaultValue: boolean;
-    };
-    summaryScoreMode: {
-        type: string;
-        model: import("mobx-state-tree").ISimpleType<string>;
-        description: string;
-        defaultValue: string;
-    };
-    minSize: {
-        type: string;
-        defaultValue: number;
-    };
-}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    color: {
-        type: string;
-        description: string;
-        defaultValue: string;
-        contextVariable: string[];
-    };
-    posColor: {
-        type: string;
-        description: string;
-        defaultValue: string;
-        contextVariable: string[];
-    };
-    negColor: {
-        type: string;
-        description: string;
-        defaultValue: string;
-        contextVariable: string[];
-    };
-    clipColor: {
-        type: string;
-        description: string;
-        defaultValue: string;
-    };
-    bicolorPivot: {
-        type: string;
-        model: import("mobx-state-tree").ISimpleType<string>;
-        description: string;
-        defaultValue: string;
-    };
-    bicolorPivotValue: {
-        type: string;
-        defaultValue: number;
-        description: string;
-    };
-}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>, undefined>>;
-export default configSchema;

package/dist/MultiXYPlotRenderer/configSchema.js

@@ -1,34 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-const configuration_1 = require("@jbrowse/core/configuration");
-const mobx_state_tree_1 = require("mobx-state-tree");
-const configSchema_1 = __importDefault(require("../configSchema"));
-function x() { }
-const configSchema = (0, configuration_1.ConfigurationSchema)('MultiXYPlotRenderer', {
-    filled: {
-        type: 'boolean',
-        defaultValue: true,
-    },
-    displayCrossHatches: {
-        type: 'boolean',
-        description: 'choose to draw cross hatches (sideways lines)',
-        defaultValue: false,
-    },
-    summaryScoreMode: {
-        type: 'stringEnum',
-        model: mobx_state_tree_1.types.enumeration('Score type', ['max', 'min', 'avg', 'whiskers']),
-        description: 'choose whether to use max/min/average or whiskers which combines all three into the same rendering',
-        defaultValue: 'avg',
-    },
-    minSize: {
-        type: 'number',
-        defaultValue: 0.7,
-    },
-}, {
-    baseConfiguration: configSchema_1.default,
-    explicitlyTyped: true,
-});
-exports.default = configSchema;

package/dist/MultiXYPlotRenderer/index.d.ts

@@ -1,2 +0,0 @@
-import type PluginManager from '@jbrowse/core/PluginManager';
-export default function MultiXYPlotRendererF(pluginManager: PluginManager): void;

package/dist/MultiXYPlotRenderer/index.js

@@ -1,17 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.default = MultiXYPlotRendererF;
-const MultiWiggleRendering_1 = __importDefault(require("../MultiWiggleRendering"));
-const MultiXYPlotRenderer_1 = __importDefault(require("./MultiXYPlotRenderer"));
-const configSchema_1 = __importDefault(require("./configSchema"));
-function MultiXYPlotRendererF(pluginManager) {
-    pluginManager.addRendererType(() => new MultiXYPlotRenderer_1.default({
-        name: 'MultiXYPlotRenderer',
-        ReactComponent: MultiWiggleRendering_1.default,
-        configSchema: configSchema_1.default,
-        pluginManager,
-    }));
-}

package/dist/QuantitativeTrack/configSchema.d.ts

@@ -1,80 +0,0 @@
-import type PluginManager from '@jbrowse/core/PluginManager';
-declare function configSchemaFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    name: {
-        description: string;
-        type: string;
-        defaultValue: string;
-    };
-    assemblyNames: {
-        description: string;
-        type: string;
-        defaultValue: string[];
-    };
-    description: {
-        description: string;
-        type: string;
-        defaultValue: string;
-    };
-    category: {
-        description: string;
-        type: string;
-        defaultValue: never[];
-    };
-    metadata: {
-        type: string;
-        description: string;
-        defaultValue: {};
-    };
-    adapter: import("mobx-state-tree").IAnyModelType;
-    textSearching: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-        indexingAttributes: {
-            type: string;
-            description: string;
-            defaultValue: string[];
-        };
-        indexingFeatureTypesToExclude: {
-            type: string;
-            description: string;
-            defaultValue: string[];
-        };
-        textSearchAdapter: import("mobx-state-tree").IAnyModelType;
-    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
-    displays: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>;
-    formatDetails: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-        feature: {
-            type: string;
-            description: string;
-            defaultValue: {};
-            contextVariable: string[];
-        };
-        subfeatures: {
-            type: string;
-            description: string;
-            defaultValue: {};
-            contextVariable: string[];
-        };
-        depth: {
-            type: string;
-            defaultValue: number;
-            description: string;
-        };
-        maxDepth: {
-            type: string;
-            defaultValue: number;
-            description: string;
-        };
-    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
-    formatAbout: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-        config: {
-            type: string;
-            description: string;
-            defaultValue: {};
-            contextVariable: string[];
-        };
-        hideUris: {
-            type: string;
-            defaultValue: boolean;
-        };
-    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
-}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "trackId">>, undefined>>;
-export default configSchemaFactory;

package/dist/QuantitativeTrack/configSchema.js

@@ -1,11 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-const configuration_1 = require("@jbrowse/core/configuration");
-const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
-function x() { }
-function configSchemaFactory(pluginManager) {
-    return (0, configuration_1.ConfigurationSchema)('QuantitativeTrack', {}, {
-        baseConfiguration: (0, models_1.createBaseTrackConfig)(pluginManager),
-    });
-}
-exports.default = configSchemaFactory;

package/dist/QuantitativeTrack/index.d.ts

@@ -1,2 +0,0 @@
-import type PluginManager from '@jbrowse/core/PluginManager';
-export default function QuantitativeTrackF(pluginManager: PluginManager): void;

package/dist/QuantitativeTrack/index.js

@@ -1,20 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.default = QuantitativeTrackF;
-const TrackType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/TrackType"));
-const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
-const configSchema_1 = __importDefault(require("./configSchema"));
-function QuantitativeTrackF(pluginManager) {
-    pluginManager.addTrackType(() => {
-        const configSchema = (0, configSchema_1.default)(pluginManager);
-        return new TrackType_1.default({
-            name: 'QuantitativeTrack',
-            displayName: 'Quantitative track',
-            configSchema,
-            stateModel: (0, models_1.createBaseTrackModel)(pluginManager, 'QuantitativeTrack', configSchema),
-        });
-    });
-}

package/dist/Tooltip.d.ts

@@ -1,18 +0,0 @@
-import type { Feature } from '@jbrowse/core/util';
-type Coord = [number, number];
-export type TooltipContentsComponent = React.ForwardRefExoticComponent<{
-    feature: Feature;
-    model: any;
-} & React.RefAttributes<HTMLDivElement>>;
-declare const Tooltip: ({ model, height, clientMouseCoord, offsetMouseCoord, clientRect, TooltipContents, useClientY, }: {
-    model: {
-        featureUnderMouse?: Feature;
-    };
-    useClientY?: boolean;
-    height: number;
-    clientMouseCoord: Coord;
-    offsetMouseCoord: Coord;
-    clientRect?: DOMRect;
-    TooltipContents: TooltipContentsComponent;
-}) => import("react/jsx-runtime").JSX.Element | null;
-export default Tooltip;

package/dist/Tooltip.js

@@ -1,34 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-const jsx_runtime_1 = require("react/jsx-runtime");
-const react_1 = require("react");
-const BaseTooltip_1 = __importDefault(require("@jbrowse/core/ui/BaseTooltip"));
-const mobx_react_1 = require("mobx-react");
-const mui_1 = require("tss-react/mui");
-const util_1 = require("./util");
-const useStyles = (0, mui_1.makeStyles)()({
-    hoverVertical: {
-        background: '#333',
-        border: 'none',
-        width: 1,
-        height: '100%',
-        top: util_1.YSCALEBAR_LABEL_OFFSET,
-        cursor: 'default',
-        position: 'absolute',
-        pointerEvents: 'none',
-    },
-});
-const Tooltip = (0, mobx_react_1.observer)(function Tooltip({ model, height, clientMouseCoord, offsetMouseCoord, clientRect, TooltipContents, useClientY, }) {
-    const { featureUnderMouse } = model;
-    const { classes } = useStyles();
-    const x = clientMouseCoord[0] + 5;
-    const y = useClientY ? clientMouseCoord[1] : (clientRect === null || clientRect === void 0 ? void 0 : clientRect.top) || 0;
-    return featureUnderMouse ? ((0, jsx_runtime_1.jsxs)(jsx_runtime_1.Fragment, { children: [(0, jsx_runtime_1.jsx)(react_1.Suspense, { fallback: null, children: (0, jsx_runtime_1.jsx)(BaseTooltip_1.default, { clientPoint: { x, y }, children: (0, jsx_runtime_1.jsx)(TooltipContents, { model: model, feature: featureUnderMouse }) }) }), (0, jsx_runtime_1.jsx)("div", { className: classes.hoverVertical, style: {
-                    left: offsetMouseCoord[0],
-                    height: height - util_1.YSCALEBAR_LABEL_OFFSET * 2,
-                } })] })) : null;
-});
-exports.default = Tooltip;

package/dist/WiggleBaseRenderer.d.ts

@@ -1,57 +0,0 @@
-import FeatureRendererType from '@jbrowse/core/pluggableElementTypes/renderers/FeatureRendererType';
-import type { ScaleOpts, Source } from './util';
-import type { RenderArgs as FeatureRenderArgs, RenderArgsDeserialized as FeatureRenderArgsDeserialized } from '@jbrowse/core/pluggableElementTypes/renderers/FeatureRendererType';
-import type { Feature } from '@jbrowse/core/util';
-import type { ThemeOptions } from '@mui/material';
-export interface RenderArgs extends FeatureRenderArgs {
-    scaleOpts: ScaleOpts;
-}
-export interface RenderArgsDeserialized extends FeatureRenderArgsDeserialized {
-    bpPerPx: number;
-    height: number;
-    highResolutionScaling: number;
-    scaleOpts: ScaleOpts;
-    displayCrossHatches: boolean;
-    ticks: {
-        values: number[];
-    };
-    inverted: boolean;
-    themeOptions: ThemeOptions;
-    statusCallback?: (arg: string) => void;
-}
-export interface RenderArgsDeserializedWithFeatures extends RenderArgsDeserialized {
-    features: Map<string, Feature>;
-    inverted: boolean;
-}
-export interface MultiRenderArgsDeserialized extends RenderArgsDeserializedWithFeatures {
-    sources: Source[];
-}
-export default abstract class WiggleBaseRenderer extends FeatureRendererType {
-    supportsSVG: boolean;
-    render(renderProps: RenderArgsDeserialized): Promise<{
-        features: Map<string, Feature>;
-        height: number;
-        width: number;
-        containsNoTransferables: boolean;
-        canvasRecordedData: Record<string, unknown>;
-        reactElement?: React.ReactElement;
-        html?: string;
-    } | {
-        features: Map<string, Feature>;
-        height: number;
-        width: number;
-        containsNoTransferables: boolean;
-        imageData: any;
-        reactElement?: React.ReactElement;
-        html?: string;
-    } | {
-        features: Map<string, Feature>;
-        height: number;
-        width: number;
-        containsNoTransferables: boolean;
-        reactElement: React.ReactElement;
-        html?: string;
-    }>;
-    abstract draw<T extends RenderArgsDeserializedWithFeatures>(ctx: CanvasRenderingContext2D, props: T): Promise<Record<string, unknown> | undefined>;
-}
-export type { RenderArgsSerialized, RenderResults, ResultsDeserialized, ResultsSerialized, } from '@jbrowse/core/pluggableElementTypes/renderers/FeatureRendererType';

package/dist/WiggleBaseRenderer.js

@@ -1,42 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-const FeatureRendererType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/renderers/FeatureRendererType"));
-const util_1 = require("@jbrowse/core/util");
-class WiggleBaseRenderer extends FeatureRendererType_1.default {
-    constructor() {
-        super(...arguments);
-        this.supportsSVG = true;
-    }
-    async render(renderProps) {
-        const features = await this.getFeatures(renderProps);
-        const { inverted, height, regions, bpPerPx, statusCallback = () => { }, } = renderProps;
-        const region = regions[0];
-        const width = (region.end - region.start) / bpPerPx;
-        const { reducedFeatures, ...rest } = await (0, util_1.updateStatus)('Rendering plot', statusCallback, () => (0, util_1.renderToAbstractCanvas)(width, height, renderProps, ctx => this.draw(ctx, {
-            ...renderProps,
-            features,
-            inverted,
-        })));
-        const results = await super.render({
-            ...renderProps,
-            ...rest,
-            features,
-            height,
-            width,
-        });
-        return {
-            ...results,
-            ...rest,
-            features: reducedFeatures
-                ? new Map(reducedFeatures.map(r => [r.id(), r]))
-                : results.features,
-            height,
-            width,
-            containsNoTransferables: true,
-        };
-    }
-}
-exports.default = WiggleBaseRenderer;

package/dist/WiggleRPC/MultiWiggleClusterScoreMatrix.d.ts

@@ -1,14 +0,0 @@
-import RpcMethodTypeWithFiltersAndRenameRegions from '@jbrowse/core/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions';
-import type { GetScoreMatrixArgs } from './types';
-export declare class MultiWiggleClusterScoreMatrix extends RpcMethodTypeWithFiltersAndRenameRegions {
-    name: string;
-    execute(args: GetScoreMatrixArgs, rpcDriverClassName: string): Promise<{
-        clusters: {
-            height: number;
-            indexes: number[];
-        } | undefined;
-        distances: number[][];
-        order: number[];
-        clustersGivenK: number[][][];
-    }>;
-}

package/dist/WiggleRPC/MultiWiggleClusterScoreMatrix.js

@@ -1,31 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.MultiWiggleClusterScoreMatrix = void 0;
-const RpcMethodTypeWithFiltersAndRenameRegions_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions"));
-const cluster_1 = require("@jbrowse/core/util/cluster");
-const getScoreMatrix_1 = require("./getScoreMatrix");
-class MultiWiggleClusterScoreMatrix extends RpcMethodTypeWithFiltersAndRenameRegions_1.default {
-    constructor() {
-        super(...arguments);
-        this.name = 'MultiWiggleClusterScoreMatrix';
-    }
-    async execute(args, rpcDriverClassName) {
-        const deserializedArgs = await this.deserializeArguments(args, rpcDriverClassName);
-        const matrix = await (0, getScoreMatrix_1.getScoreMatrix)({
-            pluginManager: this.pluginManager,
-            args: deserializedArgs,
-        });
-        return (0, cluster_1.clusterData)({
-            data: Object.values(matrix),
-            stopToken: deserializedArgs.stopToken,
-            onProgress: a => {
-                var _a;
-                (_a = deserializedArgs.statusCallback) === null || _a === void 0 ? void 0 : _a.call(deserializedArgs, a);
-            },
-        });
-    }
-}
-exports.MultiWiggleClusterScoreMatrix = MultiWiggleClusterScoreMatrix;

package/dist/WiggleRPC/MultiWiggleGetScoreMatrix.d.ts

@@ -1,6 +0,0 @@
-import RpcMethodTypeWithFiltersAndRenameRegions from '@jbrowse/core/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions';
-import type { GetScoreMatrixArgs } from './types';
-export declare class MultiWiggleGetScoreMatrix extends RpcMethodTypeWithFiltersAndRenameRegions {
-    name: string;
-    execute(args: GetScoreMatrixArgs, rpcDriverClassName: string): Promise<Record<string, number[]>>;
-}

package/dist/WiggleRPC/MultiWiggleGetScoreMatrix.js

@@ -1,22 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.MultiWiggleGetScoreMatrix = void 0;
-const RpcMethodTypeWithFiltersAndRenameRegions_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions"));
-const getScoreMatrix_1 = require("./getScoreMatrix");
-class MultiWiggleGetScoreMatrix extends RpcMethodTypeWithFiltersAndRenameRegions_1.default {
-    constructor() {
-        super(...arguments);
-        this.name = 'MultiWiggleGetScoreMatrix';
-    }
-    async execute(args, rpcDriverClassName) {
-        const deserializedArgs = await this.deserializeArguments(args, rpcDriverClassName);
-        return (0, getScoreMatrix_1.getScoreMatrix)({
-            args: deserializedArgs,
-            pluginManager: this.pluginManager,
-        });
-    }
-}
-exports.MultiWiggleGetScoreMatrix = MultiWiggleGetScoreMatrix;

package/dist/WiggleRPC/MultiWiggleGetSources.d.ts

@@ -1,14 +0,0 @@
-import RpcMethodTypeWithFiltersAndRenameRegions from '@jbrowse/core/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions';
-import type { AnyConfigurationModel } from '@jbrowse/core/configuration';
-import type { Region } from '@jbrowse/core/util';
-export declare class MultiWiggleGetSources extends RpcMethodTypeWithFiltersAndRenameRegions {
-    name: string;
-    execute(args: {
-        adapterConfig: AnyConfigurationModel;
-        stopToken?: string;
-        sessionId: string;
-        headers?: Record<string, string>;
-        regions: Region[];
-        bpPerPx: number;
-    }, rpcDriverClassName: string): Promise<any>;
-}