@jbrowse/core 4.3.0 → 5.0.0-beta.10
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +1994 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/ArrayValue.d.ts +14 -3
- package/esm/BaseFeatureWidget/BaseFeatureDetail/ArrayValue.js +36 -23
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Attributes.d.ts +10 -7
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Attributes.js +124 -21
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseAttributes.d.ts +2 -8
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseAttributes.js +4 -4
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCard.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCard.js +2 -5
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCoreDetails.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCoreDetails.js +4 -4
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BasicValue.d.ts +12 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BasicValue.js +19 -5
- package/esm/BaseFeatureWidget/BaseFeatureDetail/CoreDetails.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/CoreDetails.js +18 -23
- package/esm/BaseFeatureWidget/BaseFeatureDetail/DataGridDetails.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/DataGridDetails.js +19 -40
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureDetails.d.ts +9 -6
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureDetails.js +33 -30
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureDetailsFrame.d.ts +11 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureDetailsFrame.js +11 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureWash.d.ts +20 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureWash.js +66 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FieldActionsButton.d.ts +8 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FieldActionsButton.js +24 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FieldName.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FieldName.js +2 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Formatter.d.ts +3 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Formatter.js +19 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/ParentFeatureLine.d.ts +4 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/ParentFeatureLine.js +17 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/SimpleField.d.ts +5 -3
- package/esm/BaseFeatureWidget/BaseFeatureDetail/SimpleField.js +8 -6
- package/esm/BaseFeatureWidget/BaseFeatureDetail/UriField.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/UriField.js +7 -14
- package/esm/BaseFeatureWidget/BaseFeatureDetail/index.d.ts +7 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/index.js +15 -20
- package/esm/BaseFeatureWidget/BaseFeatureDetail/jexlFilterActions.d.ts +16 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/jexlFilterActions.js +50 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/util.d.ts +0 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/util.js +9 -10
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceBody.d.ts +18 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceBody.js +10 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceContents.d.ts +7 -4
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceContents.js +35 -24
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeatureDetails.d.ts +10 -5
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeatureDetails.js +64 -41
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeaturePanel.d.ts +3 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeaturePanel.js +17 -8
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceLegend.d.ts +6 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceLegend.js +19 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceName.d.ts +5 -4
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceName.js +15 -18
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequencePanel.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequencePanel.js +33 -17
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/consts.d.ts +3 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/consts.js +7 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/FeatureSequenceDialog.d.ts +11 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/FeatureSequenceDialog.js +29 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/HelpDialog.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/HelpDialog.js +4 -6
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceDialog.d.ts +18 -6
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceDialog.js +11 -29
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceFeatureMenu.d.ts +9 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceFeatureMenu.js +63 -58
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceTypeSelector.d.ts +7 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceTypeSelector.js +38 -51
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SettingsDialog.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SettingsDialog.js +19 -27
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/TranscriptSelector.d.ts +6 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/TranscriptSelector.js +20 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/featureTypeUtil.d.ts +12 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/featureTypeUtil.js +97 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/index.js +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/model.d.ts +62 -63
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/model.js +69 -59
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/panelAssemblyName.d.ts +21 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/panelAssemblyName.js +24 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDNASequence.d.ts +5 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDNASequence.js +93 -75
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDSSequence.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDSSequence.js +4 -11
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/GenomicSequence.d.ts +5 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/GenomicSequence.js +21 -48
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/PlainSequence.d.ts +8 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/PlainSequence.js +20 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/ProteinSequence.d.ts +6 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/ProteinSequence.js +33 -13
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/SequenceDisplay.d.ts +7 -4
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/SequenceDisplay.js +67 -11
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/renderSequenceSegments.d.ts +14 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/renderSequenceSegments.js +42 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/types.d.ts +8 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/useSequenceData.d.ts +9 -9
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/useSequenceData.js +28 -44
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/useSequenceFetch.d.ts +23 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/useSequenceFetch.js +31 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/util.d.ts +90 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/util.js +145 -23
- package/esm/BaseFeatureWidget/configSchema.d.ts +1 -1
- package/esm/BaseFeatureWidget/configSchema.js +1 -1
- package/esm/BaseFeatureWidget/formatDetails.d.ts +22 -0
- package/esm/BaseFeatureWidget/formatDetails.js +82 -0
- package/esm/BaseFeatureWidget/index.d.ts +4 -1
- package/esm/BaseFeatureWidget/index.js +2 -2
- package/esm/BaseFeatureWidget/stateModelFactory.d.ts +102 -71
- package/esm/BaseFeatureWidget/stateModelFactory.js +162 -63
- package/esm/BaseFeatureWidget/types.d.ts +15 -8
- package/esm/BaseFeatureWidget/util.d.ts +2 -37
- package/esm/BaseFeatureWidget/util.js +4 -85
- package/esm/CorePlugin.js +12 -7
- package/esm/PhasedScheduler.d.ts +4 -2
- package/esm/PhasedScheduler.js +18 -2
- package/esm/Plugin.d.ts +6 -1
- package/esm/Plugin.js +7 -0
- package/esm/PluginLoader.d.ts +55 -44
- package/esm/PluginLoader.js +290 -90
- package/esm/PluginManager.d.ts +476 -57
- package/esm/PluginManager.js +480 -91
- package/esm/ReExports/MuiDataGridReExports.d.ts +3 -2
- package/esm/ReExports/MuiDataGridReExports.js +58 -130
- package/esm/ReExports/MuiReExports.d.ts +3 -134
- package/esm/ReExports/MuiReExports.js +43 -16
- package/esm/ReExports/MuiStylesReExports.d.ts +66 -0
- package/esm/ReExports/MuiStylesReExports.js +55 -0
- package/esm/ReExports/coreModules.generated.d.ts +2 -0
- package/esm/ReExports/coreModules.generated.js +528 -0
- package/esm/ReExports/coreWorkerModules.generated.d.ts +2 -0
- package/esm/ReExports/coreWorkerModules.generated.js +488 -0
- package/esm/ReExports/frameworkModules.d.ts +2 -0
- package/esm/ReExports/frameworkModules.js +68 -0
- package/esm/ReExports/frameworkShared.d.ts +12 -0
- package/esm/ReExports/frameworkShared.js +16 -0
- package/esm/ReExports/frameworkWorkerModules.generated.d.ts +2 -0
- package/esm/ReExports/frameworkWorkerModules.generated.js +130 -0
- package/esm/ReExports/lazify.d.ts +2 -2
- package/esm/ReExports/lazify.js +16 -3
- package/esm/ReExports/list.js +433 -160
- package/esm/ReExports/modules.d.ts +1 -1
- package/esm/ReExports/modules.js +10 -146
- package/esm/ReExports/muiComponentNames.d.ts +18 -0
- package/esm/ReExports/muiComponentNames.js +130 -0
- package/esm/ReExports/registry.d.ts +3 -0
- package/esm/ReExports/registry.js +46 -0
- package/esm/ReExports/uiStub.d.ts +3 -0
- package/esm/ReExports/uiStub.js +33 -0
- package/esm/ReExports/workerModules.d.ts +2 -0
- package/esm/ReExports/workerModules.js +11 -0
- package/esm/TextSearch/BaseResults.d.ts +20 -21
- package/esm/TextSearch/BaseResults.js +8 -33
- package/esm/TextSearch/TextSearchManager.d.ts +30 -36
- package/esm/TextSearch/TextSearchManager.js +138 -44
- package/esm/TextSearch/places.d.ts +12 -0
- package/esm/TextSearch/places.js +94 -0
- package/esm/assemblyManager/assembly.d.ts +310 -35
- package/esm/assemblyManager/assembly.js +554 -263
- package/esm/assemblyManager/assemblyAdapters.d.ts +12 -0
- package/esm/assemblyManager/assemblyAdapters.js +24 -0
- package/esm/assemblyManager/assemblyConfigSchema.d.ts +135 -19
- package/esm/assemblyManager/assemblyConfigSchema.js +205 -23
- package/esm/assemblyManager/assemblyManager.d.ts +586 -323
- package/esm/assemblyManager/assemblyManager.js +352 -51
- package/esm/assemblyManager/expandAssemblyConfigShorthand.d.ts +39 -0
- package/esm/assemblyManager/expandAssemblyConfigShorthand.js +114 -0
- package/esm/assemblyManager/geneticCodes.d.ts +21 -0
- package/esm/assemblyManager/geneticCodes.js +44 -0
- package/esm/assemblyManager/getSequenceAdapterConfig.d.ts +19 -0
- package/esm/assemblyManager/getSequenceAdapterConfig.js +22 -0
- package/esm/assemblyManager/index.d.ts +1 -1
- package/esm/assemblyManager/index.js +2 -2
- package/esm/assemblyManager/indexAssemblyNames.d.ts +9 -0
- package/esm/assemblyManager/indexAssemblyNames.js +22 -0
- package/esm/assemblyManager/loadRefNameMap.d.ts +5 -0
- package/esm/assemblyManager/loadRefNameMap.js +75 -0
- package/esm/assemblyManager/refNameColors.d.ts +1 -0
- package/esm/assemblyManager/refNameColors.js +32 -0
- package/esm/assemblyManager/refNameMapKey.d.ts +7 -0
- package/esm/assemblyManager/refNameMapKey.js +12 -0
- package/esm/assemblyManager/refNameMaps.d.ts +26 -0
- package/esm/assemblyManager/refNameMaps.js +87 -0
- package/esm/assemblyManager/refNameMismatch.d.ts +54 -0
- package/esm/assemblyManager/refNameMismatch.js +66 -0
- package/esm/checkPlugins.d.ts +13 -0
- package/esm/checkPlugins.js +98 -0
- package/esm/configuration/bamIndexFields.d.ts +49 -0
- package/esm/configuration/bamIndexFields.js +41 -0
- package/esm/configuration/configurationSchema.d.ts +194 -29
- package/esm/configuration/configurationSchema.js +439 -145
- package/esm/configuration/configurationSchemaUnion.d.ts +39 -0
- package/esm/configuration/configurationSchemaUnion.js +56 -0
- package/esm/configuration/configurationSlot.d.ts +373 -30
- package/esm/configuration/configurationSlot.js +231 -224
- package/esm/configuration/fillLocations.d.ts +14 -0
- package/esm/configuration/fillLocations.js +14 -0
- package/esm/configuration/formatAboutConfigSchema.d.ts +41 -0
- package/esm/configuration/formatAboutConfigSchema.js +58 -0
- package/esm/configuration/formatDetailsConfigSchema.d.ts +54 -0
- package/esm/configuration/formatDetailsConfigSchema.js +87 -0
- package/esm/configuration/fullConfSnapshot.d.ts +13 -0
- package/esm/configuration/fullConfSnapshot.js +44 -0
- package/esm/configuration/getConf.d.ts +92 -0
- package/esm/configuration/getConf.js +141 -0
- package/esm/configuration/index.d.ts +32 -3
- package/esm/configuration/index.js +27 -2
- package/esm/configuration/indexType.d.ts +26 -0
- package/esm/configuration/indexType.js +38 -0
- package/esm/configuration/mergeFormatCallbacks.d.ts +14 -0
- package/esm/configuration/mergeFormatCallbacks.js +27 -0
- package/esm/configuration/readConfObject.d.ts +34 -0
- package/esm/configuration/readConfObject.js +118 -0
- package/esm/configuration/requirements.d.ts +37 -0
- package/esm/configuration/requirements.js +88 -0
- package/esm/configuration/schemaRegistry.d.ts +52 -0
- package/esm/configuration/schemaRegistry.js +48 -0
- package/esm/configuration/schemaTypes.d.ts +39 -0
- package/esm/configuration/schemaTypes.js +105 -0
- package/esm/configuration/slotFacade.d.ts +65 -0
- package/esm/configuration/slotFacade.js +110 -0
- package/esm/configuration/slotValueUtils.d.ts +17 -0
- package/esm/configuration/slotValueUtils.js +25 -0
- package/esm/configuration/snapshotPreprocess.d.ts +43 -0
- package/esm/configuration/snapshotPreprocess.js +161 -0
- package/esm/configuration/tabixIndexFields.d.ts +70 -0
- package/esm/configuration/tabixIndexFields.js +62 -0
- package/esm/configuration/tabixShorthand.d.ts +51 -0
- package/esm/configuration/tabixShorthand.js +72 -0
- package/esm/configuration/types.d.ts +315 -13
- package/esm/configuration/uriShorthand.d.ts +9 -0
- package/esm/configuration/uriShorthand.js +16 -0
- package/esm/data_adapters/BaseAdapter/BaseAdapter.d.ts +19 -11
- package/esm/data_adapters/BaseAdapter/BaseAdapter.js +19 -18
- package/esm/data_adapters/BaseAdapter/BaseFeatureDataAdapter.d.ts +158 -7
- package/esm/data_adapters/BaseAdapter/BaseFeatureDataAdapter.js +164 -29
- package/esm/data_adapters/BaseAdapter/BaseRefNameAliasAdapter.d.ts +1 -0
- package/esm/data_adapters/BaseAdapter/BaseSequenceAdapter.d.ts +13 -5
- package/esm/data_adapters/BaseAdapter/BaseSequenceAdapter.js +9 -7
- package/esm/data_adapters/BaseAdapter/BaseTextSearchAdapter.d.ts +2 -1
- package/esm/data_adapters/BaseAdapter/CytobandAdapter.d.ts +7 -0
- package/esm/data_adapters/BaseAdapter/RegionsAdapter.d.ts +2 -1
- package/esm/data_adapters/BaseAdapter/featureDensity.d.ts +40 -0
- package/esm/data_adapters/BaseAdapter/featureDensity.js +31 -0
- package/esm/data_adapters/BaseAdapter/getAdapterId.d.ts +2 -0
- package/esm/data_adapters/BaseAdapter/getAdapterId.js +9 -0
- package/esm/data_adapters/BaseAdapter/index.d.ts +28 -6
- package/esm/data_adapters/BaseAdapter/index.js +6 -5
- package/esm/data_adapters/BaseAdapter/rowSources.d.ts +37 -0
- package/esm/data_adapters/BaseAdapter/rowSources.js +7 -0
- package/esm/data_adapters/BaseAdapter/stats.d.ts +37 -5
- package/esm/data_adapters/BaseAdapter/stats.js +89 -24
- package/esm/data_adapters/BaseAdapter/types.d.ts +11 -13
- package/esm/data_adapters/BaseAdapter/types.js +1 -0
- package/esm/data_adapters/BaseAdapter/util.d.ts +5 -1
- package/esm/data_adapters/BaseAdapter/util.js +14 -3
- package/esm/data_adapters/BaseAdapter/zoomRange.d.ts +10 -0
- package/esm/data_adapters/CytobandAdapter/CytobandAdapter.d.ts +1 -1
- package/esm/data_adapters/CytobandAdapter/CytobandAdapter.js +5 -5
- package/esm/data_adapters/CytobandAdapter/configSchema.d.ts +34 -6
- package/esm/data_adapters/CytobandAdapter/configSchema.js +47 -17
- package/esm/data_adapters/CytobandAdapter/index.js +3 -3
- package/esm/data_adapters/adapterSessionRefcount.d.ts +61 -0
- package/esm/data_adapters/adapterSessionRefcount.js +96 -0
- package/esm/data_adapters/dataAdapterCache.d.ts +53 -2
- package/esm/data_adapters/dataAdapterCache.js +99 -25
- package/esm/data_adapters/getFeatureAdapter.d.ts +24 -0
- package/esm/data_adapters/getFeatureAdapter.js +27 -0
- package/esm/data_adapters/getSequenceSubAdapter.d.ts +19 -0
- package/esm/data_adapters/getSequenceSubAdapter.js +42 -0
- package/esm/pluggableElementTypes/AdapterType.d.ts +57 -7
- package/esm/pluggableElementTypes/AdapterType.js +44 -5
- package/esm/pluggableElementTypes/AddTrackWorkflowType.d.ts +6 -1
- package/esm/pluggableElementTypes/AddTrackWorkflowType.js +3 -1
- package/esm/pluggableElementTypes/ConnectionType.d.ts +5 -5
- package/esm/pluggableElementTypes/ConnectionType.js +1 -1
- package/esm/pluggableElementTypes/DisplayType.d.ts +54 -14
- package/esm/pluggableElementTypes/DisplayType.js +30 -7
- package/esm/pluggableElementTypes/InternetAccountType.js +1 -1
- package/esm/pluggableElementTypes/LazyStateModelElement.d.ts +32 -0
- package/esm/pluggableElementTypes/LazyStateModelElement.js +77 -0
- package/esm/pluggableElementTypes/PluggableElementBase.d.ts +11 -0
- package/esm/pluggableElementTypes/PluggableElementBase.js +11 -0
- package/esm/pluggableElementTypes/RpcMethodType.d.ts +142 -12
- package/esm/pluggableElementTypes/RpcMethodType.js +279 -98
- package/esm/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions.d.ts +18 -9
- package/esm/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions.js +26 -20
- package/esm/pluggableElementTypes/RpcMethodTypeWithRenameRegion.d.ts +5 -0
- package/esm/pluggableElementTypes/RpcMethodTypeWithRenameRegion.js +18 -0
- package/esm/pluggableElementTypes/RpcMethodTypeWithRenameRegions.d.ts +5 -0
- package/esm/pluggableElementTypes/RpcMethodTypeWithRenameRegions.js +10 -0
- package/esm/pluggableElementTypes/TextSearchAdapterType.d.ts +7 -7
- package/esm/pluggableElementTypes/TextSearchAdapterType.js +3 -1
- package/esm/pluggableElementTypes/TrackType.d.ts +2 -1
- package/esm/pluggableElementTypes/TrackType.js +1 -1
- package/esm/pluggableElementTypes/ViewType.d.ts +22 -5
- package/esm/pluggableElementTypes/ViewType.js +40 -5
- package/esm/pluggableElementTypes/WidgetType.d.ts +2 -2
- package/esm/pluggableElementTypes/WidgetType.js +1 -1
- package/esm/pluggableElementTypes/addMenuItems.d.ts +88 -0
- package/esm/pluggableElementTypes/addMenuItems.js +82 -0
- package/esm/pluggableElementTypes/extendElementType.d.ts +29 -0
- package/esm/pluggableElementTypes/extendElementType.js +72 -0
- package/esm/pluggableElementTypes/index.d.ts +8 -7
- package/esm/pluggableElementTypes/index.js +24 -14
- package/esm/pluggableElementTypes/models/BaseConnectionModelFactory.d.ts +80 -15
- package/esm/pluggableElementTypes/models/BaseConnectionModelFactory.js +90 -10
- package/esm/pluggableElementTypes/models/BaseDisplayModel.d.ts +643 -84
- package/esm/pluggableElementTypes/models/BaseDisplayModel.js +230 -60
- package/esm/pluggableElementTypes/models/BaseTrackModel.d.ts +246 -37
- package/esm/pluggableElementTypes/models/BaseTrackModel.js +416 -107
- package/esm/pluggableElementTypes/models/BaseViewModel.d.ts +236 -16
- package/esm/pluggableElementTypes/models/BaseViewModel.js +154 -16
- package/esm/pluggableElementTypes/models/InternetAccountModel.d.ts +169 -25
- package/esm/pluggableElementTypes/models/InternetAccountModel.js +218 -48
- package/esm/pluggableElementTypes/models/assertDisplayContract.d.ts +178 -0
- package/esm/pluggableElementTypes/models/assertDisplayContract.js +239 -0
- package/esm/pluggableElementTypes/models/baseConnectionConfig.d.ts +26 -8
- package/esm/pluggableElementTypes/models/baseConnectionConfig.js +18 -2
- package/esm/pluggableElementTypes/models/baseInternetAccountConfig.d.ts +31 -17
- package/esm/pluggableElementTypes/models/baseInternetAccountConfig.js +23 -2
- package/esm/pluggableElementTypes/models/baseTrackConfig.d.ts +142 -65
- package/esm/pluggableElementTypes/models/baseTrackConfig.js +215 -90
- package/esm/pluggableElementTypes/models/components/SaveTrackData.d.ts +3 -8
- package/esm/pluggableElementTypes/models/components/SaveTrackData.js +111 -139
- package/esm/pluggableElementTypes/models/components/fetchTrackData.d.ts +54 -0
- package/esm/pluggableElementTypes/models/components/fetchTrackData.js +83 -0
- package/esm/pluggableElementTypes/models/expandTrackConfigShorthand.d.ts +50 -0
- package/esm/pluggableElementTypes/models/expandTrackConfigShorthand.js +147 -0
- package/esm/pluggableElementTypes/models/index.d.ts +5 -3
- package/esm/pluggableElementTypes/models/index.js +9 -8
- package/esm/pluggableElementTypes/models/migrateTrackConfig.d.ts +48 -0
- package/esm/pluggableElementTypes/models/migrateTrackConfig.js +114 -0
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/bed.js +75 -7
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/genbank.d.ts +10 -3
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/genbank.js +272 -100
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/gff3.d.ts +6 -1
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/gff3.js +70 -74
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- package/esm/util/useFetchPlugins.d.ts +16 -0
- package/esm/util/useFetchPlugins.js +18 -0
- package/esm/util/useMeasure.d.ts +11 -1
- package/esm/util/useMeasure.js +20 -6
- package/esm/util/usePanZoom.d.ts +75 -0
- package/esm/util/usePanZoom.js +175 -0
- package/esm/util/usePanelVirtualScroll.d.ts +9 -0
- package/esm/util/usePanelVirtualScroll.js +15 -0
- package/esm/util/usePointerDrag.d.ts +37 -0
- package/esm/util/usePointerDrag.js +61 -0
- package/esm/util/useRafCommit.d.ts +4 -0
- package/esm/util/useRafCommit.js +50 -0
- package/esm/util/useResizeDrag.d.ts +91 -0
- package/esm/util/useResizeDrag.js +105 -0
- package/esm/util/useRowVirtualScroll.d.ts +9 -0
- package/esm/util/useRowVirtualScroll.js +22 -0
- package/esm/util/useVirtualScrollWheel.d.ts +23 -0
- package/esm/util/useVirtualScrollWheel.js +74 -0
- package/esm/util/viewHighlights.d.ts +3 -0
- package/esm/util/viewHighlights.js +5 -0
- package/esm/util/viewStatus.d.ts +90 -0
- package/esm/util/viewStatus.js +54 -0
- package/esm/util/virtualRange.d.ts +36 -0
- package/esm/util/virtualRange.js +26 -0
- package/esm/util/webStorage.d.ts +26 -0
- package/esm/util/webStorage.js +92 -0
- package/esm/util/wheelZoom.d.ts +65 -0
- package/esm/util/wheelZoom.js +297 -0
- package/esm/util/whenViewSettled.d.ts +74 -0
- package/esm/util/whenViewSettled.js +77 -0
- package/esm/util/withFeatureDetails.d.ts +34 -0
- package/esm/util/withFeatureDetails.js +59 -0
- package/esm/util/withLaunchInput.d.ts +174 -0
- package/esm/util/withLaunchInput.js +274 -0
- package/package.json +290 -820
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Position.d.ts +0 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Position.js +0 -14
- package/esm/BaseFeatureWidget/BaseFeatureDetail/types.d.ts +0 -7
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/test_data/DLGAP3.d.ts +0 -80
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/test_data/DLGAP3.js +0 -583
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/test_data/NCDN.d.ts +0 -141
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/test_data/NCDN.js +0 -1116
- package/esm/ReExports/BaseFeatureDetails.d.ts +0 -1
- package/esm/ReExports/BaseFeatureDetails.js +0 -9
- package/esm/ReExports/DataGrid.d.ts +0 -1
- package/esm/ReExports/DataGrid.js +0 -1
- package/esm/ReExports/index.d.ts +0 -1
- package/esm/ReExports/index.js +0 -1
- package/esm/configuration/util.d.ts +0 -10
- package/esm/configuration/util.js +0 -123
- package/esm/data_adapters/BaseAdapter/BaseOptions.d.ts +0 -18
- package/esm/data_adapters/util.d.ts +0 -1
- package/esm/data_adapters/util.js +0 -6
- package/esm/pluggableElementTypes/GlyphType.d.ts +0 -43
- package/esm/pluggableElementTypes/GlyphType.js +0 -18
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/fetchSequence.d.ts +0 -5
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/fetchSequence.js +0 -17
- package/esm/pluggableElementTypes/renderers/BoxRendererType.d.ts +0 -52
- package/esm/pluggableElementTypes/renderers/BoxRendererType.js +0 -78
- package/esm/pluggableElementTypes/renderers/CircularChordRendererType.d.ts +0 -4
- package/esm/pluggableElementTypes/renderers/CircularChordRendererType.js +0 -4
- package/esm/pluggableElementTypes/renderers/FeatureRendererType.d.ts +0 -58
- package/esm/pluggableElementTypes/renderers/FeatureRendererType.js +0 -77
- package/esm/pluggableElementTypes/renderers/LayoutSession.d.ts +0 -31
- package/esm/pluggableElementTypes/renderers/LayoutSession.js +0 -40
- package/esm/pluggableElementTypes/renderers/RendererType.d.ts +0 -28
- package/esm/pluggableElementTypes/renderers/RendererType.js +0 -20
- package/esm/pluggableElementTypes/renderers/ServerSideRendererType.d.ts +0 -58
- package/esm/pluggableElementTypes/renderers/ServerSideRendererType.js +0 -108
- package/esm/pluggableElementTypes/renderers/index.d.ts +0 -6
- package/esm/pluggableElementTypes/renderers/index.js +0 -6
- package/esm/pluggableElementTypes/renderers/util.d.ts +0 -3
- package/esm/pluggableElementTypes/renderers/util.js +0 -14
- package/esm/rpc/baseRpcConfig.d.ts +0 -8
- package/esm/rpc/baseRpcConfig.js +0 -10
- package/esm/rpc/mainThreadRpcConfig.d.ts +0 -8
- package/esm/rpc/mainThreadRpcConfig.js +0 -8
- package/esm/rpc/methods/CoreGetFeatureDensityStats.d.ts +0 -17
- package/esm/rpc/methods/CoreGetFeatureDensityStats.js +0 -25
- package/esm/rpc/methods/CoreGetFeatureDetails.d.ts +0 -11
- package/esm/rpc/methods/CoreGetFeatureDetails.js +0 -24
- package/esm/rpc/methods/CoreGetFileInfo.d.ts +0 -9
- package/esm/rpc/methods/CoreGetFileInfo.js +0 -15
- package/esm/rpc/methods/CoreRender.d.ts +0 -14
- package/esm/rpc/methods/CoreRender.js +0 -40
- package/esm/rpc/methods/CoreSaveFeatureData.d.ts +0 -16
- package/esm/rpc/methods/CoreSaveFeatureData.js +0 -32
- package/esm/rpc/methods/util.d.ts +0 -15
- package/esm/rpc/methods/util.js +0 -7
- package/esm/rpc/webWorkerRpcConfig.d.ts +0 -8
- package/esm/rpc/webWorkerRpcConfig.js +0 -8
- package/esm/ui/MenuButton.d.ts +0 -1
- package/esm/ui/MenuButton.js +0 -1
- package/esm/ui/MenuItems.d.ts +0 -15
- package/esm/ui/MenuItems.js +0 -59
- package/esm/ui/useEvent.d.ts +0 -1
- package/esm/ui/useEvent.js +0 -10
- package/esm/util/blobToDataURL.d.ts +0 -1
- package/esm/util/blobToDataURL.js +0 -14
- package/esm/util/compositeMap.d.ts +0 -11
- package/esm/util/compositeMap.js +0 -59
- package/esm/util/flatqueue/index.d.ts +0 -11
- package/esm/util/flatqueue/index.js +0 -61
- package/esm/util/layouts/BaseLayout.d.ts +0 -30
- package/esm/util/layouts/MultiLayout.d.ts +0 -12
- package/esm/util/layouts/MultiLayout.js +0 -40
- package/esm/util/layouts/PileupLayout.d.ts +0 -41
- package/esm/util/layouts/PileupLayout.js +0 -202
- package/esm/util/layouts/PrecomputedLayout.d.ts +0 -30
- package/esm/util/layouts/PrecomputedLayout.js +0 -71
- package/esm/util/layouts/SceneGraph.d.ts +0 -31
- package/esm/util/layouts/SceneGraph.js +0 -121
- package/esm/util/makeAbortableReaction.d.ts +0 -3
- package/esm/util/makeAbortableReaction.js +0 -47
- package/esm/util/map-obj/index.d.ts +0 -13
- package/esm/util/map-obj/index.js +0 -92
- package/esm/util/nextTick.d.ts +0 -1
- package/esm/util/nextTick.js +0 -3
- package/esm/util/offscreenCanvasGetSerializingSvg.d.ts +0 -5
- package/esm/util/offscreenCanvasGetSerializingSvg.js +0 -9
- package/esm/util/offscreenCanvasUtils.d.ts +0 -12
- package/esm/util/offscreenCanvasUtils.js +0 -19
- package/esm/util/renderToAbstractCanvas.d.ts +0 -17
- package/esm/util/renderToAbstractCanvas.js +0 -53
- package/esm/util/stopToken.d.ts +0 -19
- package/esm/util/stopToken.js +0 -90
- package/esm/util/transferables.d.ts +0 -2
- package/esm/util/transferables.js +0 -35
- package/esm/util/tss-react/mui/index.d.ts +0 -1
- package/esm/util/tss-react/mui/index.js +0 -1
- package/esm/util/tss-react/mui/mui.d.ts +0 -10
- package/esm/util/tss-react/mui/mui.js +0 -5
- package/esm/util/when.d.ts +0 -1
- package/esm/util/when.js +0 -1
- /package/esm/{BaseFeatureWidget/BaseFeatureDetail/types.js → data_adapters/BaseAdapter/CytobandAdapter.js} +0 -0
- /package/esm/data_adapters/BaseAdapter/{BaseOptions.js → zoomRange.js} +0 -0
- /package/esm/{util/layouts/BaseLayout.js → rpc/RpcRegistry.js} +0 -0
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? value.filter(v => !isLocation(v)).map(valueWithoutLocations)
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? withoutLocations(value)
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/**
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*
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* fails if the two stop agreeing.
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*/
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function measureLabels(attributes, opts) {
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const { omits, deepOmits, prefix } = opts;
|
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let widest = 0;
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const measure = (key) => measureText([...prefix, key].join('.'), FIELD_NAME_FONT_SIZE);
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continue;
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}
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}
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}
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else if (isObject(value)) {
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widest = Math.max(widest, isUriLocation(value)
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? measure(key)
|
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: measureLabels(value, {
|
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omits: deepOmits,
|
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96
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deepOmits,
|
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97
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prefix: [...prefix, key],
|
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98
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}));
|
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}
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else {
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|
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}
|
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}
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return widest;
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}
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function widestLabel(attributes, opts) {
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return Math.ceil(measureLabels(attributes, opts)) + FIELD_NAME_PADDING;
|
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}
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|
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|
export default function Attributes(props) {
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const {
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const { omit = [], omitSingleLevel = [], descriptions, formatter, fieldActions, hideUris, prefix = [], labelWidth, } = props;
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const attributes = hideUris
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? withoutLocations(props.attributes)
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: props.attributes;
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const omits = new Set([...omit, ...globalOmit, ...omitSingleLevel]);
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const
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const
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const shown = Object.entries(attributes).filter(([k, v]) => v != null && !omits.has(k));
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// Measured over the whole subtree on the outermost call, then handed down, so
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// one card has one label column. Per-level measurement put `type`/`trackId` in
|
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// a narrow column, `adapter.type` in a wider one and `adapter.craiLocation` in
|
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// a wider one still — three ragged steps down a single card.
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const width = Math.min(labelWidth ??
|
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widestLabel(attributes, {
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omits,
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// `omitSingleLevel` is what its name says: the recursive call below
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|
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// the same depth or it measures a label that isn't there
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deepOmits: omitSingleLevel.length
|
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? new Set([...omit, ...globalOmit])
|
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: omits,
|
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prefix,
|
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}), MAX_FIELD_NAME_WIDTH);
|
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return (_jsx(_Fragment, { children: shown.map(([key, value]) => {
|
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31
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|
const description = accessNested([...prefix, key], descriptions);
|
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|
if (Array.isArray(value)) {
|
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-
|
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|
+
// Only use the data grid when schemas are homogeneous enough;
|
|
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|
+
// heterogeneous arrays fall through to ArrayValue which renders
|
|
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|
+
// each object as individual field sections instead of disappearing
|
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|
+
return isHomogeneousObjectArray(value) ? (_jsx(Suspense, { fallback: null, children: _jsx(DataGridDetails, { name: key, prefix: prefix, value: value }) }, key)) : (_jsx(ArrayValue, { name: key, value: value, formatter: formatter, fieldActions: fieldActions, description: description, prefix: prefix, width: width }, key));
|
|
34
138
|
}
|
|
35
139
|
else if (isObject(value)) {
|
|
36
|
-
|
|
37
|
-
return isUriLocation(value) ? (hideUris ? null : (_jsx(UriAttribute, { name: key, prefix: prefix, value: value }, key))) : (_jsx(Attributes, { ...rest, formatter: formatter, attributes: value, descriptions: descriptions, prefix: [...prefix, key] }, key));
|
|
140
|
+
return isUriLocation(value) ? (_jsx(UriField, { name: key, prefix: prefix, value: value, width: width }, key)) : (_jsx(Attributes, { attributes: value, omit: omit, descriptions: descriptions, formatter: formatter, fieldActions: fieldActions, prefix: [...prefix, key], labelWidth: width }, key));
|
|
38
141
|
}
|
|
39
142
|
else {
|
|
40
|
-
return (_jsx(SimpleField, { name: key, formatter: formatter, value: value, description: description, prefix: prefix, width:
|
|
143
|
+
return (_jsx(SimpleField, { name: key, formatter: formatter, fieldActions: fieldActions, value: value, description: description, prefix: prefix, width: width }, key));
|
|
41
144
|
}
|
|
42
145
|
}) }));
|
|
43
146
|
}
|
|
@@ -1,8 +1,2 @@
|
|
|
1
|
-
import type {
|
|
2
|
-
export
|
|
3
|
-
omit?: string[];
|
|
4
|
-
model: any;
|
|
5
|
-
descriptions?: Record<string, React.ReactNode>;
|
|
6
|
-
formatter?: (val: unknown, key: string) => React.ReactNode;
|
|
7
|
-
}
|
|
8
|
-
export default function BaseAttributes(props: BaseProps): import("react/jsx-runtime").JSX.Element;
|
|
1
|
+
import type { BaseProps } from '../types.tsx';
|
|
2
|
+
export default function BaseAttributes(props: BaseProps): import("react").JSX.Element;
|
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
import { jsx as _jsx } from "react/jsx-runtime";
|
|
2
|
-
import Attributes from
|
|
3
|
-
import BaseCard from
|
|
2
|
+
import Attributes from './Attributes.js';
|
|
3
|
+
import BaseCard from './BaseCard.js';
|
|
4
4
|
export default function BaseAttributes(props) {
|
|
5
|
-
const { title = 'Attributes', feature } = props;
|
|
6
|
-
return (_jsx(BaseCard, {
|
|
5
|
+
const { title = 'Attributes', defaultExpanded, feature } = props;
|
|
6
|
+
return (_jsx(BaseCard, { title: title, defaultExpanded: defaultExpanded, children: _jsx(Attributes, { ...props, attributes: feature }) }));
|
|
7
7
|
}
|
|
@@ -1,2 +1,2 @@
|
|
|
1
1
|
import type { BaseCardProps } from '../types.tsx';
|
|
2
|
-
export default function BaseCard({ children, title, defaultExpanded, }: BaseCardProps): import("react
|
|
2
|
+
export default function BaseCard({ children, title, defaultExpanded, }: BaseCardProps): import("react").JSX.Element;
|
|
@@ -1,17 +1,14 @@
|
|
|
1
1
|
import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
|
|
2
2
|
import ExpandMore from '@mui/icons-material/ExpandMore';
|
|
3
3
|
import { Accordion, AccordionDetails, AccordionSummary, Typography, } from '@mui/material';
|
|
4
|
-
import { makeStyles } from
|
|
4
|
+
import { makeStyles } from '../../util/tss-react/index.js';
|
|
5
5
|
const useStyles = makeStyles()(theme => ({
|
|
6
6
|
expansionPanelDetails: {
|
|
7
7
|
display: 'block',
|
|
8
8
|
padding: theme.spacing(1),
|
|
9
9
|
},
|
|
10
|
-
icon: {
|
|
11
|
-
color: theme.palette.tertiary.contrastText || '#fff',
|
|
12
|
-
},
|
|
13
10
|
}));
|
|
14
11
|
export default function BaseCard({ children, title, defaultExpanded = true, }) {
|
|
15
12
|
const { classes } = useStyles();
|
|
16
|
-
return (_jsxs(Accordion, { defaultExpanded: defaultExpanded, children: [_jsx(AccordionSummary, { expandIcon: _jsx(ExpandMore, {
|
|
13
|
+
return (_jsxs(Accordion, { defaultExpanded: defaultExpanded, slotProps: { transition: { unmountOnExit: true } }, "data-testid": `BaseCard-${title}`, children: [_jsx(AccordionSummary, { expandIcon: _jsx(ExpandMore, {}), children: _jsx(Typography, { variant: "button", children: title }) }), _jsx(AccordionDetails, { className: classes.expansionPanelDetails, children: children })] }));
|
|
17
14
|
}
|
|
@@ -1,2 +1,2 @@
|
|
|
1
1
|
import type { BaseProps } from '../types.tsx';
|
|
2
|
-
export default function BaseCoreDetails(props: BaseProps): import("react
|
|
2
|
+
export default function BaseCoreDetails(props: BaseProps): import("react").JSX.Element;
|
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
import { jsx as _jsx } from "react/jsx-runtime";
|
|
2
|
-
import BaseCard from
|
|
3
|
-
import CoreDetails from
|
|
2
|
+
import BaseCard from './BaseCard.js';
|
|
3
|
+
import CoreDetails from './CoreDetails.js';
|
|
4
4
|
export default function BaseCoreDetails(props) {
|
|
5
|
-
const { title = 'Primary data' } = props;
|
|
6
|
-
return (_jsx(BaseCard, {
|
|
5
|
+
const { title = 'Primary data', defaultExpanded } = props;
|
|
6
|
+
return (_jsx(BaseCard, { title: title, defaultExpanded: defaultExpanded, children: _jsx(CoreDetails, { ...props }) }));
|
|
7
7
|
}
|
|
@@ -1,3 +1,14 @@
|
|
|
1
|
+
export declare function isBareUrl(text: string): boolean;
|
|
2
|
+
export declare function valueText(value: unknown): string;
|
|
3
|
+
/**
|
|
4
|
+
* A value that is nothing but a URL is a link; anything else goes through
|
|
5
|
+
* SanitizedHTML, which renders markup and links URLs inside longer text. Both
|
|
6
|
+
* open in a new tab: navigating in place discards the session, and in an
|
|
7
|
+
* embedded JBrowse it takes the host page with it.
|
|
8
|
+
*/
|
|
9
|
+
export declare function ValueText({ text }: {
|
|
10
|
+
text: string;
|
|
11
|
+
}): import("react").JSX.Element;
|
|
1
12
|
export default function BasicValue({ value }: {
|
|
2
13
|
value: unknown;
|
|
3
|
-
}): import("react
|
|
14
|
+
}): import("react").JSX.Element;
|
|
@@ -1,9 +1,9 @@
|
|
|
1
1
|
import { jsx as _jsx } from "react/jsx-runtime";
|
|
2
2
|
import { isValidElement } from 'react';
|
|
3
3
|
import { Link } from '@mui/material';
|
|
4
|
-
import { SanitizedHTML } from
|
|
5
|
-
import { isObject } from
|
|
6
|
-
import { makeStyles } from
|
|
4
|
+
import { SanitizedHTML } from '../../ui/index.js';
|
|
5
|
+
import { isObject } from '../../util/index.js';
|
|
6
|
+
import { makeStyles } from '../../util/tss-react/index.js';
|
|
7
7
|
const useStyles = makeStyles()(theme => ({
|
|
8
8
|
fieldValue: {
|
|
9
9
|
wordBreak: 'break-word',
|
|
@@ -13,8 +13,22 @@ const useStyles = makeStyles()(theme => ({
|
|
|
13
13
|
overflow: 'auto',
|
|
14
14
|
},
|
|
15
15
|
}));
|
|
16
|
+
export function isBareUrl(text) {
|
|
17
|
+
return /^https?:\/\/\S+$/.test(text);
|
|
18
|
+
}
|
|
19
|
+
export function valueText(value) {
|
|
20
|
+
return isObject(value) ? JSON.stringify(value) : String(value);
|
|
21
|
+
}
|
|
22
|
+
/**
|
|
23
|
+
* A value that is nothing but a URL is a link; anything else goes through
|
|
24
|
+
* SanitizedHTML, which renders markup and links URLs inside longer text. Both
|
|
25
|
+
* open in a new tab: navigating in place discards the session, and in an
|
|
26
|
+
* embedded JBrowse it takes the host page with it.
|
|
27
|
+
*/
|
|
28
|
+
export function ValueText({ text }) {
|
|
29
|
+
return isBareUrl(text) ? (_jsx(Link, { href: text, target: "_blank", rel: "noopener noreferrer", children: text })) : (_jsx(SanitizedHTML, { html: text }));
|
|
30
|
+
}
|
|
16
31
|
export default function BasicValue({ value }) {
|
|
17
32
|
const { classes } = useStyles();
|
|
18
|
-
|
|
19
|
-
return (_jsx("div", { className: classes.fieldValue, children: isValidElement(value) ? (value) : isLink ? (_jsx(Link, { href: `${value}`, children: `${value}` })) : (_jsx(SanitizedHTML, { html: isObject(value) ? JSON.stringify(value) : String(value) })) }));
|
|
33
|
+
return (_jsx("div", { className: classes.fieldValue, children: isValidElement(value) ? value : _jsx(ValueText, { text: valueText(value) }) }));
|
|
20
34
|
}
|
|
@@ -1,2 +1,2 @@
|
|
|
1
1
|
import type { BaseProps } from '../types.tsx';
|
|
2
|
-
export default function CoreDetails(
|
|
2
|
+
export default function CoreDetails({ feature }: BaseProps): import("react").JSX.Element;
|
|
@@ -1,24 +1,19 @@
|
|
|
1
|
-
import {
|
|
2
|
-
import
|
|
3
|
-
import
|
|
4
|
-
import
|
|
5
|
-
export default function CoreDetails(
|
|
6
|
-
const {
|
|
7
|
-
|
|
8
|
-
|
|
9
|
-
const
|
|
10
|
-
const
|
|
11
|
-
|
|
12
|
-
|
|
13
|
-
|
|
14
|
-
|
|
15
|
-
|
|
16
|
-
|
|
17
|
-
|
|
18
|
-
|
|
19
|
-
};
|
|
20
|
-
return (_jsxs(_Fragment, { children: [_jsx(SimpleField, { name: "Position", value: _jsx(Position, { ...props, feature: formattedFeat }) }), Object.entries(coreRenderedDetails)
|
|
21
|
-
.map(([key, name]) => [name, displayedDetails[key]])
|
|
22
|
-
.filter(([, value]) => value != null)
|
|
23
|
-
.map(([name, value]) => (_jsx(SimpleField, { name: name, value: Array.isArray(value) ? value.join(', ') : value }, name)))] }));
|
|
1
|
+
import { Fragment as _Fragment, jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
|
|
2
|
+
import { assembleLocString, toLocale } from '../../util/index.js';
|
|
3
|
+
import { getStrandStr } from '../util.js';
|
|
4
|
+
import SimpleField from './SimpleField.js';
|
|
5
|
+
export default function CoreDetails({ feature }) {
|
|
6
|
+
const { name, description, type, start, end, strand } = feature;
|
|
7
|
+
// only a formatDetails callback sets `length`, to rewrite or hide the row:
|
|
8
|
+
// an adapter's own field of that name is in Attributes' globalOmit
|
|
9
|
+
const length = 'length' in feature ? feature.length : end - start;
|
|
10
|
+
const rows = [
|
|
11
|
+
['Name', name],
|
|
12
|
+
['Description', description],
|
|
13
|
+
['Length', typeof length === 'number' ? toLocale(length) : length],
|
|
14
|
+
['Type', type],
|
|
15
|
+
];
|
|
16
|
+
return (_jsxs(_Fragment, { children: [_jsx(SimpleField, { name: "Position", value: [assembleLocString(feature), getStrandStr(strand)]
|
|
17
|
+
.filter(Boolean)
|
|
18
|
+
.join(' ') }), rows.map(([label, value]) => (_jsx(SimpleField, { name: label, value: Array.isArray(value) ? value.join(', ') : value }, label)))] }));
|
|
24
19
|
}
|
|
@@ -1,12 +1,12 @@
|
|
|
1
1
|
import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
|
|
2
2
|
import { useState } from 'react';
|
|
3
|
-
import {
|
|
3
|
+
import { Typography } from '@mui/material';
|
|
4
4
|
import { DataGrid } from '@mui/x-data-grid';
|
|
5
|
-
import
|
|
6
|
-
import
|
|
7
|
-
import {
|
|
8
|
-
import {
|
|
9
|
-
import
|
|
5
|
+
import DataGridFlexContainer from '../../ui/DataGridFlexContainer.js';
|
|
6
|
+
import { LabeledCheckbox, SanitizedHTML } from '../../ui/index.js';
|
|
7
|
+
import { getStr, measureGridWidth } from '../../util/index.js';
|
|
8
|
+
import { makeStyles } from '../../util/tss-react/index.js';
|
|
9
|
+
import FieldName from './FieldName.js';
|
|
10
10
|
const useStyles = makeStyles()(theme => ({
|
|
11
11
|
margin: {
|
|
12
12
|
marginBottom: theme.spacing(4),
|
|
@@ -20,38 +20,17 @@ const useStyles = makeStyles()(theme => ({
|
|
|
20
20
|
export default function DataGridDetails({ value, prefix, name, }) {
|
|
21
21
|
const { classes } = useStyles();
|
|
22
22
|
const [checked, setChecked] = useState(false);
|
|
23
|
-
|
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24
|
-
|
|
25
|
-
|
|
26
|
-
|
|
27
|
-
|
|
28
|
-
|
|
29
|
-
|
|
30
|
-
|
|
31
|
-
|
|
32
|
-
|
|
33
|
-
|
|
34
|
-
|
|
35
|
-
|
|
36
|
-
}
|
|
37
|
-
}
|
|
38
|
-
let colNames;
|
|
39
|
-
if (unionKeys.has('id')) {
|
|
40
|
-
unionKeys.delete('id');
|
|
41
|
-
colNames = ['identifier', ...unionKeys];
|
|
42
|
-
}
|
|
43
|
-
else {
|
|
44
|
-
colNames = [...unionKeys];
|
|
45
|
-
}
|
|
46
|
-
const widths = colNames.map(e => measureGridWidth(rows.map(r => r[e])));
|
|
47
|
-
if (unionKeys.size < keys.length + 5) {
|
|
48
|
-
return (_jsxs("div", { className: classes.margin, children: [_jsx(FieldName, { prefix: prefix, name: name }), _jsx(FormControlLabel, { control: _jsx(Checkbox, { checked: checked, onChange: event => {
|
|
49
|
-
setChecked(event.target.checked);
|
|
50
|
-
} }), label: _jsx(Typography, { variant: "body2", children: "Show options" }) }), _jsx(DataGridFlexContainer, { children: _jsx(DataGrid, { disableRowSelectionOnClick: true, rows: rows, rowHeight: 20, columnHeaderHeight: 35, hideFooter: rows.length < 25, showToolbar: checked, columns: colNames.map((val, index) => ({
|
|
51
|
-
field: val,
|
|
52
|
-
width: widths[index],
|
|
53
|
-
renderCell: ({ value }) => (_jsx("div", { className: classes.cell, children: _jsx(SanitizedHTML, { html: getStr(value || '') }) })),
|
|
54
|
-
})) }) })] }));
|
|
55
|
-
}
|
|
56
|
-
return null;
|
|
23
|
+
// DataGrid needs a unique row id; rather than commandeering any 'id' field
|
|
24
|
+
// the feature itself carries, tag each row with the array index and point
|
|
25
|
+
// getRowId at it, leaving the feature's own keys (including 'id') untouched
|
|
26
|
+
const rows = value.map((val, k) => ({ ...val, __dataGridRowId: k }));
|
|
27
|
+
const cols = [...new Set(value.flatMap(Object.keys))];
|
|
28
|
+
const widths = cols.map(col => measureGridWidth(value.map(r => r[col])));
|
|
29
|
+
return (_jsxs("div", { className: classes.margin, children: [_jsx(FieldName, { prefix: prefix, name: name }), _jsx(LabeledCheckbox, { checked: checked, onChange: val => {
|
|
30
|
+
setChecked(val);
|
|
31
|
+
}, label: _jsx(Typography, { variant: "body2", children: "Show options" }) }), _jsx(DataGridFlexContainer, { children: _jsx(DataGrid, { disableRowSelectionOnClick: true, rows: rows, getRowId: row => row.__dataGridRowId, rowHeight: 20, columnHeaderHeight: 35, hideFooter: rows.length < 25, showToolbar: checked, columns: cols.map((field, index) => ({
|
|
32
|
+
field,
|
|
33
|
+
width: widths[index],
|
|
34
|
+
renderCell: ({ value }) => (_jsx("div", { className: classes.cell, children: _jsx(SanitizedHTML, { html: getStr(value ?? '') }) })),
|
|
35
|
+
})) }) })] }));
|
|
57
36
|
}
|
|
@@ -1,11 +1,14 @@
|
|
|
1
1
|
import type { SimpleFeatureSerialized } from '../../util/index.ts';
|
|
2
|
-
import type { Descriptors } from '../types.tsx';
|
|
3
|
-
|
|
4
|
-
|
|
5
|
-
model: IAnyStateTreeNode;
|
|
2
|
+
import type { Descriptors, FeatureDetailsModel, FeatureFormatter, FieldActions } from '../types.tsx';
|
|
3
|
+
interface FeatureDetailsProps {
|
|
4
|
+
model: FeatureDetailsModel;
|
|
6
5
|
feature: SimpleFeatureSerialized;
|
|
6
|
+
unformatted?: SimpleFeatureSerialized;
|
|
7
7
|
depth?: number;
|
|
8
8
|
omit?: string[];
|
|
9
9
|
descriptions?: Descriptors;
|
|
10
|
-
formatter?:
|
|
11
|
-
|
|
10
|
+
formatter?: FeatureFormatter;
|
|
11
|
+
fieldActions?: FieldActions;
|
|
12
|
+
}
|
|
13
|
+
declare const FeatureDetails: (props: FeatureDetailsProps) => import("react").JSX.Element;
|
|
14
|
+
export default FeatureDetails;
|