@jbrowse/core 1.7.11 → 2.1.0

package/util/QuickLRU.js

@@ -1,352 +1,104 @@
 "use strict";
-
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
-
-Object.defineProperty(exports, "__esModule", {
-  value: true
-});
-exports.default = void 0;
-
-var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
-
-var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
-
-var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/classCallCheck"));
-
-var _createClass2 = _interopRequireDefault(require("@babel/runtime/helpers/createClass"));
-
-function _createForOfIteratorHelper(o, allowArrayLike) { var it = typeof Symbol !== "undefined" && o[Symbol.iterator] || o["@@iterator"]; if (!it) { if (Array.isArray(o) || (it = _unsupportedIterableToArray(o)) || allowArrayLike && o && typeof o.length === "number") { if (it) o = it; var i = 0; var F = function F() {}; return { s: F, n: function n() { if (i >= o.length) return { done: true }; return { done: false, value: o[i++] }; }, e: function e(_e) { throw _e; }, f: F }; } throw new TypeError("Invalid attempt to iterate non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); } var normalCompletion = true, didErr = false, err; return { s: function s() { it = it.call(o); }, n: function n() { var step = it.next(); normalCompletion = step.done; return step; }, e: function e(_e2) { didErr = true; err = _e2; }, f: function f() { try { if (!normalCompletion && it.return != null) it.return(); } finally { if (didErr) throw err; } } }; }
-
-function _unsupportedIterableToArray(o, minLen) { if (!o) return; if (typeof o === "string") return _arrayLikeToArray(o, minLen); var n = Object.prototype.toString.call(o).slice(8, -1); if (n === "Object" && o.constructor) n = o.constructor.name; if (n === "Map" || n === "Set") return Array.from(o); if (n === "Arguments" || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(n)) return _arrayLikeToArray(o, minLen); }
-
-function _arrayLikeToArray(arr, len) { if (len == null || len > arr.length) len = arr.length; for (var i = 0, arr2 = new Array(len); i < len; i++) { arr2[i] = arr[i]; } return arr2; }
-
+Object.defineProperty(exports, "__esModule", { value: true });
 /* eslint-disable no-underscore-dangle */
-
 /**
  * Heavily based on [quick-lru](https://www.npmjs.com/package/quick-lru)
  * (quick-lru didn't work for us because the export wouldn't compile in Webpack
  * properly)
  */
-var QuickLRU = /*#__PURE__*/function (_Symbol$iterator) {
-  function QuickLRU() {
-    var options = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};
-    (0, _classCallCheck2.default)(this, QuickLRU);
-
-    if (!(options.maxSize && options.maxSize > 0)) {
-      throw new TypeError('`maxSize` must be a number greater than 0');
-    }
-
-    this.maxSize = options.maxSize;
-    this.cache = new Map();
-    this.oldCache = new Map();
-    this._size = 0;
-  }
-
-  (0, _createClass2.default)(QuickLRU, [{
-    key: "_set",
-    value: function _set(key, value) {
-      this.cache.set(key, value);
-      this._size += 1;
-
-      if (this._size >= this.maxSize) {
-        this._size = 0;
-        this.oldCache = this.cache;
+class QuickLRU {
+    constructor(options = {}) {
+        if (!(options.maxSize && options.maxSize > 0)) {
+            throw new TypeError('`maxSize` must be a number greater than 0');
+        }
+        this.maxSize = options.maxSize;
         this.cache = new Map();
-      }
-    }
-  }, {
-    key: "get",
-    value: function get(key) {
-      if (this.cache.has(key)) {
-        return this.cache.get(key);
-      }
-
-      if (this.oldCache.has(key)) {
-        var value = this.oldCache.get(key);
-        this.oldCache.delete(key);
-
-        this._set(key, value);
-
-        return value;
-      }
-
-      return undefined;
+        this.oldCache = new Map();
+        this._size = 0;
     }
-  }, {
-    key: "set",
-    value: function set(key, value) {
-      if (this.cache.has(key)) {
+    _set(key, value) {
         this.cache.set(key, value);
-      } else {
-        this._set(key, value);
-      }
-
-      return this;
+        this._size += 1;
+        if (this._size >= this.maxSize) {
+            this._size = 0;
+            this.oldCache = this.cache;
+            this.cache = new Map();
+        }
+    }
+    get(key) {
+        if (this.cache.has(key)) {
+            return this.cache.get(key);
+        }
+        if (this.oldCache.has(key)) {
+            const value = this.oldCache.get(key);
+            this.oldCache.delete(key);
+            this._set(key, value);
+            return value;
+        }
+        return undefined;
+    }
+    set(key, value) {
+        if (this.cache.has(key)) {
+            this.cache.set(key, value);
+        }
+        else {
+            this._set(key, value);
+        }
+        return this;
+    }
+    has(key) {
+        return this.cache.has(key) || this.oldCache.has(key);
     }
-  }, {
-    key: "has",
-    value: function has(key) {
-      return this.cache.has(key) || this.oldCache.has(key);
+    peek(key) {
+        if (this.cache.has(key)) {
+            return this.cache.get(key);
+        }
+        if (this.oldCache.has(key)) {
+            return this.oldCache.get(key);
+        }
+        return undefined;
     }
-  }, {
-    key: "peek",
-    value: function peek(key) {
-      if (this.cache.has(key)) {
-        return this.cache.get(key);
-      }
-
-      if (this.oldCache.has(key)) {
-        return this.oldCache.get(key);
-      }
-
-      return undefined;
+    delete(key) {
+        const deleted = this.cache.delete(key);
+        if (deleted) {
+            this._size -= 1;
+        }
+        return this.oldCache.delete(key) || deleted;
     }
-  }, {
-    key: "delete",
-    value: function _delete(key) {
-      var deleted = this.cache.delete(key);
-
-      if (deleted) {
-        this._size -= 1;
-      }
-
-      return this.oldCache.delete(key) || deleted;
+    clear() {
+        this.cache.clear();
+        this.oldCache.clear();
+        this._size = 0;
     }
-  }, {
-    key: "clear",
-    value: function clear() {
-      this.cache.clear();
-      this.oldCache.clear();
-      this._size = 0;
+    *keys() {
+        for (const [key] of this) {
+            yield key;
+        }
     }
-  }, {
-    key: "keys",
-    value: /*#__PURE__*/_regenerator.default.mark(function keys() {
-      var _iterator, _step, _step$value, key;
-
-      return _regenerator.default.wrap(function keys$(_context) {
-        while (1) {
-          switch (_context.prev = _context.next) {
-            case 0:
-              _iterator = _createForOfIteratorHelper(this);
-              _context.prev = 1;
-
-              _iterator.s();
-
-            case 3:
-              if ((_step = _iterator.n()).done) {
-                _context.next = 9;
-                break;
-              }
-
-              _step$value = (0, _slicedToArray2.default)(_step.value, 1), key = _step$value[0];
-              _context.next = 7;
-              return key;
-
-            case 7:
-              _context.next = 3;
-              break;
-
-            case 9:
-              _context.next = 14;
-              break;
-
-            case 11:
-              _context.prev = 11;
-              _context.t0 = _context["catch"](1);
-
-              _iterator.e(_context.t0);
-
-            case 14:
-              _context.prev = 14;
-
-              _iterator.f();
-
-              return _context.finish(14);
-
-            case 17:
-            case "end":
-              return _context.stop();
-          }
+    *values() {
+        for (const [, value] of this) {
+            yield value;
         }
-      }, keys, this, [[1, 11, 14, 17]]);
-    })
-  }, {
-    key: "values",
-    value: /*#__PURE__*/_regenerator.default.mark(function values() {
-      var _iterator2, _step2, _step2$value, value;
-
-      return _regenerator.default.wrap(function values$(_context2) {
-        while (1) {
-          switch (_context2.prev = _context2.next) {
-            case 0:
-              _iterator2 = _createForOfIteratorHelper(this);
-              _context2.prev = 1;
-
-              _iterator2.s();
-
-            case 3:
-              if ((_step2 = _iterator2.n()).done) {
-                _context2.next = 9;
-                break;
-              }
-
-              _step2$value = (0, _slicedToArray2.default)(_step2.value, 2), value = _step2$value[1];
-              _context2.next = 7;
-              return value;
-
-            case 7:
-              _context2.next = 3;
-              break;
-
-            case 9:
-              _context2.next = 14;
-              break;
-
-            case 11:
-              _context2.prev = 11;
-              _context2.t0 = _context2["catch"](1);
-
-              _iterator2.e(_context2.t0);
-
-            case 14:
-              _context2.prev = 14;
-
-              _iterator2.f();
-
-              return _context2.finish(14);
-
-            case 17:
-            case "end":
-              return _context2.stop();
-          }
+    }
+    *[Symbol.iterator]() {
+        for (const item of this.cache) {
+            yield item;
         }
-      }, values, this, [[1, 11, 14, 17]]);
-    })
-  }, {
-    key: _Symbol$iterator,
-    value: /*#__PURE__*/_regenerator.default.mark(function value() {
-      var _iterator3, _step3, item, _iterator4, _step4, _item, _item2, key;
-
-      return _regenerator.default.wrap(function value$(_context3) {
-        while (1) {
-          switch (_context3.prev = _context3.next) {
-            case 0:
-              _iterator3 = _createForOfIteratorHelper(this.cache);
-              _context3.prev = 1;
-
-              _iterator3.s();
-
-            case 3:
-              if ((_step3 = _iterator3.n()).done) {
-                _context3.next = 9;
-                break;
-              }
-
-              item = _step3.value;
-              _context3.next = 7;
-              return item;
-
-            case 7:
-              _context3.next = 3;
-              break;
-
-            case 9:
-              _context3.next = 14;
-              break;
-
-            case 11:
-              _context3.prev = 11;
-              _context3.t0 = _context3["catch"](1);
-
-              _iterator3.e(_context3.t0);
-
-            case 14:
-              _context3.prev = 14;
-
-              _iterator3.f();
-
-              return _context3.finish(14);
-
-            case 17:
-              _iterator4 = _createForOfIteratorHelper(this.oldCache);
-              _context3.prev = 18;
-
-              _iterator4.s();
-
-            case 20:
-              if ((_step4 = _iterator4.n()).done) {
-                _context3.next = 28;
-                break;
-              }
-
-              _item = _step4.value;
-              _item2 = (0, _slicedToArray2.default)(_item, 1), key = _item2[0];
-
-              if (this.cache.has(key)) {
-                _context3.next = 26;
-                break;
-              }
-
-              _context3.next = 26;
-              return _item;
-
-            case 26:
-              _context3.next = 20;
-              break;
-
-            case 28:
-              _context3.next = 33;
-              break;
-
-            case 30:
-              _context3.prev = 30;
-              _context3.t1 = _context3["catch"](18);
-
-              _iterator4.e(_context3.t1);
-
-            case 33:
-              _context3.prev = 33;
-
-              _iterator4.f();
-
-              return _context3.finish(33);
-
-            case 36:
-            case "end":
-              return _context3.stop();
-          }
+        for (const item of this.oldCache) {
+            const [key] = item;
+            if (!this.cache.has(key)) {
+                yield item;
+            }
         }
-      }, value, this, [[1, 11, 14, 17], [18, 30, 33, 36]]);
-    })
-  }, {
-    key: "size",
-    get: function get() {
-      var oldCacheSize = 0;
-
-      var _iterator5 = _createForOfIteratorHelper(this.oldCache.keys()),
-          _step5;
-
-      try {
-        for (_iterator5.s(); !(_step5 = _iterator5.n()).done;) {
-          var key = _step5.value;
-
-          if (!this.cache.has(key)) {
-            oldCacheSize += 1;
-          }
+    }
+    get size() {
+        let oldCacheSize = 0;
+        for (const key of this.oldCache.keys()) {
+            if (!this.cache.has(key)) {
+                oldCacheSize += 1;
+            }
         }
-      } catch (err) {
-        _iterator5.e(err);
-      } finally {
-        _iterator5.f();
-      }
-
-      return this._size + oldCacheSize;
+        return this._size + oldCacheSize;
     }
-  }]);
-  return QuickLRU;
-}(Symbol.iterator);
-
-var _default = QuickLRU;
-exports.default = _default;
+}
+exports.default = QuickLRU;

package/util/TimeTraveller.d.ts

@@ -0,0 +1,19 @@
+declare const TimeTraveller: import("mobx-state-tree").IModelType<{
+    undoIdx: import("mobx-state-tree").IType<number | undefined, number, number>;
+    targetPath: import("mobx-state-tree").IType<string | undefined, string, string>;
+}, {
+    history: unknown[];
+    notTrackingUndo: boolean;
+} & {
+    readonly canUndo: boolean;
+    readonly canRedo: boolean;
+} & {
+    stopTrackingUndo(): void;
+    resumeTrackingUndo(): void;
+    addUndoState(todos: unknown): void;
+    beforeDestroy(): void;
+    initialize(): void;
+    undo(): void;
+    redo(): void;
+}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
+export default TimeTraveller;

package/util/TimeTraveller.js

@@ -0,0 +1,86 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+// adapted from https://github.com/mobxjs/mobx-state-tree/blob/master/packages/mst-middlewares/src/time-traveller.ts
+const mobx_state_tree_1 = require("mobx-state-tree");
+const MAX_HISTORY_LENGTH = 20;
+function debounce(func, timeout = 300) {
+    let timer;
+    return (...args) => {
+        clearTimeout(timer);
+        timer = setTimeout(() => func(...args), timeout);
+    };
+}
+const TimeTraveller = mobx_state_tree_1.types
+    .model('TimeTraveller', {
+    undoIdx: -1,
+    targetPath: '',
+})
+    .volatile(() => ({
+    history: [],
+    notTrackingUndo: false,
+}))
+    .views(self => ({
+    get canUndo() {
+        return self.undoIdx > 0 && !self.notTrackingUndo;
+    },
+    get canRedo() {
+        return self.undoIdx < self.history.length - 1 && !self.notTrackingUndo;
+    },
+}))
+    .actions(self => {
+    let targetStore;
+    let snapshotDisposer;
+    let skipNextUndoState = false;
+    return {
+        // allows user code to (temporarily) stop tracking undo states
+        stopTrackingUndo() {
+            self.notTrackingUndo = true;
+        },
+        // allows user code to resume tracking undo states
+        resumeTrackingUndo() {
+            self.notTrackingUndo = false;
+        },
+        addUndoState(todos) {
+            if (self.notTrackingUndo) {
+                return;
+            }
+            if (skipNextUndoState) {
+                // skip recording if this state was caused by undo / redo
+                skipNextUndoState = false;
+                return;
+            }
+            self.history.splice(self.undoIdx + 1);
+            self.history.push(todos);
+            if (self.history.length > MAX_HISTORY_LENGTH) {
+                self.history.shift();
+            }
+            self.undoIdx = self.history.length - 1;
+        },
+        beforeDestroy() {
+            snapshotDisposer();
+        },
+        initialize() {
+            targetStore = self.targetPath
+                ? (0, mobx_state_tree_1.resolvePath)(self, self.targetPath)
+                : (0, mobx_state_tree_1.getEnv)(self).targetStore;
+            if (!targetStore) {
+                throw new Error('Failed to find target store for TimeTraveller. Please provide `targetPath` property, or a `targetStore` in the environment');
+            }
+            snapshotDisposer = (0, mobx_state_tree_1.onSnapshot)(targetStore, debounce((snapshot) => this.addUndoState(snapshot), 300));
+            if (self.history.length === 0) {
+                this.addUndoState((0, mobx_state_tree_1.getSnapshot)(targetStore));
+            }
+        },
+        undo() {
+            self.undoIdx--;
+            skipNextUndoState = true;
+            (0, mobx_state_tree_1.applySnapshot)(targetStore, self.history[self.undoIdx]);
+        },
+        redo() {
+            self.undoIdx++;
+            skipNextUndoState = true;
+            (0, mobx_state_tree_1.applySnapshot)(targetStore, self.history[self.undoIdx]);
+        },
+    };
+});
+exports.default = TimeTraveller;