sequencescape-client-api 0.3.5
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- checksums.yaml +7 -0
- data/.gitignore +7 -0
- data/.rspec +1 -0
- data/.rvmrc +52 -0
- data/.yardoc/checksums +96 -0
- data/.yardoc/complete +0 -0
- data/.yardoc/object_types +0 -0
- data/.yardoc/objects/root.dat +0 -0
- data/.yardoc/proxy_types +0 -0
- data/Gemfile +4 -0
- data/README.markdown +4 -0
- data/Rakefile +2 -0
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- data/doc/BaitLibrary.html +139 -0
- data/doc/Hash.html +242 -0
- data/doc/NilClass.html +214 -0
- data/doc/Sequencescape/Api/Actions/ClassActionHelpers.html +213 -0
- data/doc/Sequencescape/Api/Actions/InstanceActionHelpers.html +282 -0
- data/doc/Sequencescape/Api/Actions.html +197 -0
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- data/doc/Sequencescape/Api/Associations/Base.html +237 -0
- data/doc/Sequencescape/Api/Associations/BelongsTo/AssociationProxy.html +332 -0
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- data/doc/Sequencescape/Api/Associations/BelongsTo/InlineAssociationProxy.html +173 -0
- data/doc/Sequencescape/Api/Associations/BelongsTo.html +212 -0
- data/doc/Sequencescape/Api/Associations/HasMany/AssociationProxy.html +366 -0
- data/doc/Sequencescape/Api/Associations/HasMany/InlineAssociationProxy.html +529 -0
- data/doc/Sequencescape/Api/Associations/HasMany/Json.html +250 -0
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- data/doc/Sequencescape/Api/Associations/HasMany/Validation.html +245 -0
- data/doc/Sequencescape/Api/Associations/HasMany.html +212 -0
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- data/doc/Sequencescape/Api/Associations/InstanceMethods.html +496 -0
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- data/doc/Sequencescape/Api/ConnectionFactory.html +321 -0
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- data/doc/Sequencescape/Behaviour/Receptacle/Aliquot.html +258 -0
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- data/doc/Sequencescape/SpecificTubeCreation.html +258 -0
- data/doc/Sequencescape/Stamp.html +258 -0
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- data/doc/Sequencescape/Study.html +258 -0
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- data/doc/Sequencescape/Tag/Group.html +219 -0
- data/doc/Sequencescape/Tag.html +149 -0
- data/doc/Sequencescape/Tag2Layout.html +258 -0
- data/doc/Sequencescape/Tag2LayoutTemplate.html +258 -0
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- data/doc/Sequencescape/TubePurpose.html +268 -0
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- data/doc/Sequencescape/Well.html +362 -0
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- data/lib/sequencescape/asset.rb +10 -0
- data/lib/sequencescape/asset_audit.rb +7 -0
- data/lib/sequencescape/asset_group.rb +9 -0
- data/lib/sequencescape/bait_library.rb +14 -0
- data/lib/sequencescape/bait_library_layout.rb +9 -0
- data/lib/sequencescape/barcode_printer.rb +13 -0
- data/lib/sequencescape/barcoded_asset.rb +12 -0
- data/lib/sequencescape/batch.rb +24 -0
- data/lib/sequencescape/behaviour/barcoded.rb +15 -0
- data/lib/sequencescape/behaviour/labeled.rb +14 -0
- data/lib/sequencescape/behaviour/qced.rb +31 -0
- data/lib/sequencescape/behaviour/receptacle.rb +21 -0
- data/lib/sequencescape/behaviour/state_driven.rb +19 -0
- data/lib/sequencescape/bulk_transfer.rb +8 -0
- data/lib/sequencescape/comment.rb +7 -0
- data/lib/sequencescape/custom_metadatum_collection.rb +8 -0
- data/lib/sequencescape/lane.rb +8 -0
- data/lib/sequencescape/library_event.rb +5 -0
- data/lib/sequencescape/library_tube.rb +7 -0
- data/lib/sequencescape/locale/en.yml +190 -0
- data/lib/sequencescape/lot.rb +11 -0
- data/lib/sequencescape/lot_type.rb +20 -0
- data/lib/sequencescape/multiplexed_library_tube.rb +6 -0
- data/lib/sequencescape/order.rb +13 -0
- data/lib/sequencescape/order_template.rb +19 -0
- data/lib/sequencescape/pipeline.rb +10 -0
- data/lib/sequencescape/plate/pooling.rb +23 -0
- data/lib/sequencescape/plate/well_structure.rb +27 -0
- data/lib/sequencescape/plate.rb +71 -0
- data/lib/sequencescape/plate_conversion.rb +8 -0
- data/lib/sequencescape/plate_creation.rb +8 -0
- data/lib/sequencescape/plate_purpose.rb +24 -0
- data/lib/sequencescape/plate_template.rb +13 -0
- data/lib/sequencescape/pooled_plate_creation.rb +8 -0
- data/lib/sequencescape/project.rb +11 -0
- data/lib/sequencescape/qc_decision.rb +9 -0
- data/lib/sequencescape/qc_file.rb +14 -0
- data/lib/sequencescape/qcable.rb +17 -0
- data/lib/sequencescape/qcable_creator.rb +13 -0
- data/lib/sequencescape/request.rb +16 -0
- data/lib/sequencescape/robot.rb +5 -0
- data/lib/sequencescape/sample.rb +51 -0
- data/lib/sequencescape/sample_tube.rb +7 -0
- data/lib/sequencescape/search.rb +80 -0
- data/lib/sequencescape/specific_tube_creation.rb +8 -0
- data/lib/sequencescape/stamp.rb +9 -0
- data/lib/sequencescape/state_change.rb +11 -0
- data/lib/sequencescape/study.rb +14 -0
- data/lib/sequencescape/submission.rb +16 -0
- data/lib/sequencescape/submission_pool.rb +7 -0
- data/lib/sequencescape/tag.rb +14 -0
- data/lib/sequencescape/tag2_layout.rb +10 -0
- data/lib/sequencescape/tag2_layout_template.rb +9 -0
- data/lib/sequencescape/tag_group.rb +4 -0
- data/lib/sequencescape/tag_layout.rb +10 -0
- data/lib/sequencescape/tag_layout_template.rb +15 -0
- data/lib/sequencescape/template.rb +6 -0
- data/lib/sequencescape/transfer.rb +9 -0
- data/lib/sequencescape/transfer_request.rb +12 -0
- data/lib/sequencescape/transfer_request_collection.rb +8 -0
- data/lib/sequencescape/transfer_template.rb +9 -0
- data/lib/sequencescape/tube.rb +26 -0
- data/lib/sequencescape/tube_creation.rb +8 -0
- data/lib/sequencescape/tube_from_tube_creation.rb +8 -0
- data/lib/sequencescape/tube_purpose.rb +24 -0
- data/lib/sequencescape/user.rb +13 -0
- data/lib/sequencescape/volume_update.rb +6 -0
- data/lib/sequencescape/well.rb +19 -0
- data/lib/sequencescape/work_completion.rb +10 -0
- data/lib/sequencescape-api/actions.rb +69 -0
- data/lib/sequencescape-api/associations/base/instance_methods.rb +57 -0
- data/lib/sequencescape-api/associations/base.rb +15 -0
- data/lib/sequencescape-api/associations/belongs_to.rb +127 -0
- data/lib/sequencescape-api/associations/has_many/json.rb +10 -0
- data/lib/sequencescape-api/associations/has_many/validation.rb +37 -0
- data/lib/sequencescape-api/associations/has_many.rb +123 -0
- data/lib/sequencescape-api/associations.rb +112 -0
- data/lib/sequencescape-api/capabilities.rb +11 -0
- data/lib/sequencescape-api/composition.rb +37 -0
- data/lib/sequencescape-api/connection_factory/actions.rb +154 -0
- data/lib/sequencescape-api/connection_factory/helpers.rb +9 -0
- data/lib/sequencescape-api/connection_factory.rb +40 -0
- data/lib/sequencescape-api/core.rb +63 -0
- data/lib/sequencescape-api/core_ext/array.rb +7 -0
- data/lib/sequencescape-api/core_ext/hash.rb +18 -0
- data/lib/sequencescape-api/core_ext.rb +2 -0
- data/lib/sequencescape-api/error_handling.rb +42 -0
- data/lib/sequencescape-api/errors.rb +38 -0
- data/lib/sequencescape-api/finder_methods.rb +184 -0
- data/lib/sequencescape-api/locale/en.yml +7 -0
- data/lib/sequencescape-api/rails.rb +88 -0
- data/lib/sequencescape-api/resource/active_model.rb +17 -0
- data/lib/sequencescape-api/resource/attribute_groups.rb +94 -0
- data/lib/sequencescape-api/resource/attributes.rb +87 -0
- data/lib/sequencescape-api/resource/instance_methods.rb +24 -0
- data/lib/sequencescape-api/resource/json.rb +114 -0
- data/lib/sequencescape-api/resource/modifications.rb +111 -0
- data/lib/sequencescape-api/resource.rb +47 -0
- data/lib/sequencescape-api/resource_model_proxy.rb +44 -0
- data/lib/sequencescape-api/version.rb +5 -0
- data/lib/sequencescape-api.rb +16 -0
- data/lib/sequencescape.rb +81 -0
- data/sequencescape-api.gemspec +32 -0
- data/spec/sequencescape-api/associations_spec.rb +95 -0
- data/spec/sequencescape-api/contracts/belongs-to-association.txt +14 -0
- data/spec/sequencescape-api/contracts/client-fails-authentication.txt +6 -0
- data/spec/sequencescape-api/contracts/create-invalid-resource.txt +10 -0
- data/spec/sequencescape-api/contracts/create-model-c-has-many-inline-nested.txt +10 -0
- data/spec/sequencescape-api/contracts/create-model-c-has-many-inline.txt +10 -0
- data/spec/sequencescape-api/contracts/create-model-c-has-many.txt +10 -0
- data/spec/sequencescape-api/contracts/create-model-c.txt +11 -0
- data/spec/sequencescape-api/contracts/create-via-has-many.txt +9 -0
- data/spec/sequencescape-api/contracts/model-a-instance.txt +21 -0
- data/spec/sequencescape-api/contracts/model-b-instance.txt +38 -0
- data/spec/sequencescape-api/contracts/model-c-instance-created.txt +17 -0
- data/spec/sequencescape-api/contracts/model-c-instance-updated.txt +17 -0
- data/spec/sequencescape-api/contracts/model-c-instance.txt +28 -0
- data/spec/sequencescape-api/contracts/model-c-invalid-attribute.txt +8 -0
- data/spec/sequencescape-api/contracts/resource-not-found.txt +6 -0
- data/spec/sequencescape-api/contracts/results-page-1.txt +17 -0
- data/spec/sequencescape-api/contracts/results-page-2.txt +18 -0
- data/spec/sequencescape-api/contracts/results-page-3.txt +17 -0
- data/spec/sequencescape-api/contracts/retrieve-belongs-to-association.txt +3 -0
- data/spec/sequencescape-api/contracts/retrieve-model.txt +4 -0
- data/spec/sequencescape-api/contracts/retrieve-results-page-1.txt +3 -0
- data/spec/sequencescape-api/contracts/retrieve-results-page-2.txt +3 -0
- data/spec/sequencescape-api/contracts/retrieve-results-page-3.txt +3 -0
- data/spec/sequencescape-api/contracts/retrieve-root-with-an-authorised-client.txt +5 -0
- data/spec/sequencescape-api/contracts/retrieve-root-with-an-unauthorised-client.txt +4 -0
- data/spec/sequencescape-api/contracts/retrieve-unauthorised-model-a-list.txt +4 -0
- data/spec/sequencescape-api/contracts/retrieve-unauthorised-model-b-list.txt +4 -0
- data/spec/sequencescape-api/contracts/retrieve-unauthorised-model-c-list.txt +4 -0
- data/spec/sequencescape-api/contracts/root-response-for-authorised-client.txt +20 -0
- data/spec/sequencescape-api/contracts/root-response-for-unauthorised-client.txt +28 -0
- data/spec/sequencescape-api/contracts/unauthorised-model-a-list.txt +15 -0
- data/spec/sequencescape-api/contracts/unauthorised-model-b-list.txt +14 -0
- data/spec/sequencescape-api/contracts/unauthorised-model-c-list.txt +15 -0
- data/spec/sequencescape-api/contracts/update-invalid-resource.txt +10 -0
- data/spec/sequencescape-api/contracts/update-model-c.txt +11 -0
- data/spec/sequencescape-api/finding_methods_spec.rb +34 -0
- data/spec/sequencescape-api/modifications_spec.rb +169 -0
- data/spec/sequencescape-api/root_spec.rb +58 -0
- data/spec/spec_helper.rb +13 -0
- data/spec/support/contract_helper.rb +112 -0
- data/spec/support/namespaces.rb +67 -0
- data/spec/support/shared_examples.rb +12 -0
- metadata +540 -0
data/doc/_index.html
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<div id="content"><h1 class="noborder title">Documentation by YARD 0.9.5</h1>
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<h1 class="alphaindex">Alphabetic Index</h1>
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<h2>File Listing</h2>
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<li class="r1"><a href="index.html" title="README">README</a></li>
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<div class="clear"></div>
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<h2>Namespace Listing A-Z</h2>
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<li>
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<span class='object_link'><a href="Sequencescape/Api/ConnectionFactory/Actions.html" title="Sequencescape::Api::ConnectionFactory::Actions (module)">Actions</a></span>
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87
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<small>(Sequencescape::Api::ConnectionFactory)</small>
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<small>(Sequencescape::Api)</small>
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<span class='object_link'><a href="Sequencescape/Api/Resource/ActiveModel.html" title="Sequencescape::Api::Resource::ActiveModel (module)">ActiveModel</a></span>
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101
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<small>(Sequencescape::Api::Resource)</small>
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<span class='object_link'><a href="Sequencescape/Behaviour/Receptacle/Aliquot.html" title="Sequencescape::Behaviour::Receptacle::Aliquot (class)">Aliquot</a></span>
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108
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109
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<small>(Sequencescape::Behaviour::Receptacle)</small>
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110
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</li>
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<span class='object_link'><a href="Sequencescape/Api/FinderMethods/AllHandler.html" title="Sequencescape::Api::FinderMethods::AllHandler (class)">AllHandler</a></span>
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115
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116
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<small>(Sequencescape::Api::FinderMethods)</small>
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117
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118
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</li>
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<span class='object_link'><a href="Sequencescape/Api.html" title="Sequencescape::Api (class)">Api</a></span>
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<small>(Sequencescape)</small>
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<span class='object_link'><a href="Sequencescape/Api/Rails/ApplicationController.html" title="Sequencescape::Api::Rails::ApplicationController (module)">ApplicationController</a></span>
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<small>(Sequencescape::Api::Rails)</small>
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131
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<span class='object_link'><a href="Array.html" title="Array (class)">Array</a></span>
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<li>
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<span class='object_link'><a href="Sequencescape/Asset.html" title="Sequencescape::Asset (class)">Asset</a></span>
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<small>(Sequencescape)</small>
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143
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<li>
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<span class='object_link'><a href="Sequencescape/AssetAudit.html" title="Sequencescape::AssetAudit (class)">AssetAudit</a></span>
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<small>(Sequencescape)</small>
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150
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<span class='object_link'><a href="Sequencescape/AssetGroup.html" title="Sequencescape::AssetGroup (class)">AssetGroup</a></span>
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157
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<span class='object_link'><a href="Sequencescape/Api/Associations/BelongsTo/AssociationProxy.html" title="Sequencescape::Api::Associations::BelongsTo::AssociationProxy (class)">AssociationProxy</a></span>
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162
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<small>(Sequencescape::Api::Associations::BelongsTo)</small>
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164
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<span class='object_link'><a href="Sequencescape/Api/Associations/HasMany/AssociationProxy.html" title="Sequencescape::Api::Associations::HasMany::AssociationProxy (class)">AssociationProxy</a></span>
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<small>(Sequencescape::Api::Associations::HasMany)</small>
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<span class='object_link'><a href="Sequencescape/Api/Associations.html" title="Sequencescape::Api::Associations (module)">Associations</a></span>
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<small>(Sequencescape::Api)</small>
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178
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<span class='object_link'><a href="Sequencescape/Api/Resource/Attributes.html" title="Sequencescape::Api::Resource::Attributes (module)">Attributes</a></span>
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183
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184
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<small>(Sequencescape::Api::Resource)</small>
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185
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186
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187
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192
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<ul id="alpha_B" class="alpha">
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<li class="letter">B</li>
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<li>
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<span class='object_link'><a href="BaitLibrary.html" title="BaitLibrary (class)">BaitLibrary</a></span>
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<span class='object_link'><a href="Sequencescape/BaitLibraryLayout.html" title="Sequencescape::BaitLibraryLayout (class)">BaitLibraryLayout</a></span>
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203
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204
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<small>(Sequencescape)</small>
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205
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208
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209
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<span class='object_link'><a href="Sequencescape/BarcodePrinter.html" title="Sequencescape::BarcodePrinter (class)">BarcodePrinter</a></span>
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210
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211
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<small>(Sequencescape)</small>
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212
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213
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215
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<li>
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216
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<span class='object_link'><a href="Sequencescape/Behaviour/Barcoded.html" title="Sequencescape::Behaviour::Barcoded (module)">Barcoded</a></span>
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217
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+
|
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218
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+
<small>(Sequencescape::Behaviour)</small>
|
|
219
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+
|
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220
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221
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222
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<li>
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223
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<span class='object_link'><a href="Sequencescape/BarcodedAsset.html" title="Sequencescape::BarcodedAsset (class)">BarcodedAsset</a></span>
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224
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+
|
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225
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<small>(Sequencescape)</small>
|
|
226
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+
|
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227
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+
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228
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229
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<li>
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230
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<span class='object_link'><a href="Sequencescape/Api/Associations/Base.html" title="Sequencescape::Api::Associations::Base (class)">Base</a></span>
|
|
231
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+
|
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232
|
+
<small>(Sequencescape::Api::Associations)</small>
|
|
233
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+
|
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234
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+
</li>
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235
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+
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236
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<li>
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237
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<span class='object_link'><a href="Sequencescape/Search/BaseHandler.html" title="Sequencescape::Search::BaseHandler (class)">BaseHandler</a></span>
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238
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|
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239
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+
<small>(Sequencescape::Search)</small>
|
|
240
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+
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241
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</li>
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242
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243
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<li>
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244
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<span class='object_link'><a href="Sequencescape/Api/BasicErrorHandling.html" title="Sequencescape::Api::BasicErrorHandling (module)">BasicErrorHandling</a></span>
|
|
245
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+
|
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246
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+
<small>(Sequencescape::Api)</small>
|
|
247
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+
|
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248
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+
</li>
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249
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250
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<li>
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251
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<span class='object_link'><a href="Sequencescape/Batch.html" title="Sequencescape::Batch (class)">Batch</a></span>
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252
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+
|
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253
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<small>(Sequencescape)</small>
|
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254
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+
|
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255
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</li>
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256
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257
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<li>
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258
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<span class='object_link'><a href="Sequencescape/Behaviour.html" title="Sequencescape::Behaviour (module)">Behaviour</a></span>
|
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259
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|
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260
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<small>(Sequencescape)</small>
|
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261
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+
|
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262
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</li>
|
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263
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+
|
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264
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<li>
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265
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<span class='object_link'><a href="Sequencescape/Api/Associations/BelongsTo.html" title="Sequencescape::Api::Associations::BelongsTo (module)">BelongsTo</a></span>
|
|
266
|
+
|
|
267
|
+
<small>(Sequencescape::Api::Associations)</small>
|
|
268
|
+
|
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269
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+
</li>
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270
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+
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271
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<li>
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272
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<span class='object_link'><a href="Sequencescape/BulkTransfer.html" title="Sequencescape::BulkTransfer (class)">BulkTransfer</a></span>
|
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273
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+
|
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274
|
+
<small>(Sequencescape)</small>
|
|
275
|
+
|
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276
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+
</li>
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277
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+
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278
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</ul>
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279
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280
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281
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282
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<ul id="alpha_C" class="alpha">
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283
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<li class="letter">C</li>
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284
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<ul>
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285
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+
|
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286
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+
<li>
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287
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<span class='object_link'><a href="Sequencescape/Api/FinderMethods/Caching.html" title="Sequencescape::Api::FinderMethods::Caching (module)">Caching</a></span>
|
|
288
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+
|
|
289
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+
<small>(Sequencescape::Api::FinderMethods)</small>
|
|
290
|
+
|
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291
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+
</li>
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292
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+
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293
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<li>
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294
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<span class='object_link'><a href="Sequencescape/Api/Actions/ClassActionHelpers.html" title="Sequencescape::Api::Actions::ClassActionHelpers (module)">ClassActionHelpers</a></span>
|
|
295
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+
|
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296
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+
<small>(Sequencescape::Api::Actions)</small>
|
|
297
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+
|
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298
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</li>
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299
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+
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300
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<li>
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301
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<span class='object_link'><a href="Sequencescape/Api/Resource/Json/ClassMethods.html" title="Sequencescape::Api::Resource::Json::ClassMethods (module)">ClassMethods</a></span>
|
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302
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+
|
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303
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<small>(Sequencescape::Api::Resource::Json)</small>
|
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304
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+
|
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305
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+
</li>
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306
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+
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307
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<li>
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308
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<span class='object_link'><a href="Sequencescape/Api/Resource/Json/CoercionHandler.html" title="Sequencescape::Api::Resource::Json::CoercionHandler (class)">CoercionHandler</a></span>
|
|
309
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+
|
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310
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+
<small>(Sequencescape::Api::Resource::Json)</small>
|
|
311
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+
|
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312
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+
</li>
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313
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+
|
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314
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<li>
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315
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<span class='object_link'><a href="Sequencescape/Comment.html" title="Sequencescape::Comment (class)">Comment</a></span>
|
|
316
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+
|
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317
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+
<small>(Sequencescape)</small>
|
|
318
|
+
|
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319
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+
</li>
|
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320
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+
|
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321
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<li>
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322
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+
<span class='object_link'><a href="Sequencescape/Plate/CommentsCreation.html" title="Sequencescape::Plate::CommentsCreation (module)">CommentsCreation</a></span>
|
|
323
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+
|
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324
|
+
<small>(Sequencescape::Plate)</small>
|
|
325
|
+
|
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326
|
+
</li>
|
|
327
|
+
|
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328
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+
<li>
|
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329
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+
<span class='object_link'><a href="Sequencescape/Api/Associations/BelongsTo/CommonBehaviour.html" title="Sequencescape::Api::Associations::BelongsTo::CommonBehaviour (module)">CommonBehaviour</a></span>
|
|
330
|
+
|
|
331
|
+
<small>(Sequencescape::Api::Associations::BelongsTo)</small>
|
|
332
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+
|
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333
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+
</li>
|
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334
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+
|
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335
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<li>
|
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336
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<span class='object_link'><a href="Sequencescape/Api/Associations/HasMany/Validation/CompositeErrors.html" title="Sequencescape::Api::Associations::HasMany::Validation::CompositeErrors (class)">CompositeErrors</a></span>
|
|
337
|
+
|
|
338
|
+
<small>(Sequencescape::Api::Associations::HasMany::Validation)</small>
|
|
339
|
+
|
|
340
|
+
</li>
|
|
341
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+
|
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342
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+
<li>
|
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343
|
+
<span class='object_link'><a href="Sequencescape/Api/Associations/InstanceMethods/CompositeErrors.html" title="Sequencescape::Api::Associations::InstanceMethods::CompositeErrors (class)">CompositeErrors</a></span>
|
|
344
|
+
|
|
345
|
+
<small>(Sequencescape::Api::Associations::InstanceMethods)</small>
|
|
346
|
+
|
|
347
|
+
</li>
|
|
348
|
+
|
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349
|
+
<li>
|
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350
|
+
<span class='object_link'><a href="Sequencescape/Api/Composition.html" title="Sequencescape::Api::Composition (module)">Composition</a></span>
|
|
351
|
+
|
|
352
|
+
<small>(Sequencescape::Api)</small>
|
|
353
|
+
|
|
354
|
+
</li>
|
|
355
|
+
|
|
356
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+
<li>
|
|
357
|
+
<span class='object_link'><a href="Sequencescape/Api/ConnectionFactory.html" title="Sequencescape::Api::ConnectionFactory (class)">ConnectionFactory</a></span>
|
|
358
|
+
|
|
359
|
+
<small>(Sequencescape::Api)</small>
|
|
360
|
+
|
|
361
|
+
</li>
|
|
362
|
+
|
|
363
|
+
<li>
|
|
364
|
+
<span class='object_link'><a href="Sequencescape/Plate/CurrentVolumeSubstraction.html" title="Sequencescape::Plate::CurrentVolumeSubstraction (module)">CurrentVolumeSubstraction</a></span>
|
|
365
|
+
|
|
366
|
+
<small>(Sequencescape::Plate)</small>
|
|
367
|
+
|
|
368
|
+
</li>
|
|
369
|
+
|
|
370
|
+
</ul>
|
|
371
|
+
</ul>
|
|
372
|
+
|
|
373
|
+
|
|
374
|
+
<ul id="alpha_D" class="alpha">
|
|
375
|
+
<li class="letter">D</li>
|
|
376
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<ul>
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377
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378
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<li>
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379
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<span class='object_link'><a href="Sequencescape/Api/FinderMethods/Delegation.html" title="Sequencescape::Api::FinderMethods::Delegation (module)">Delegation</a></span>
|
|
380
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|
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381
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<small>(Sequencescape::Api::FinderMethods)</small>
|
|
382
|
+
|
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383
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+
</li>
|
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384
|
+
|
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385
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</ul>
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386
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+
</ul>
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387
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388
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389
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<ul id="alpha_E" class="alpha">
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390
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<li class="letter">E</li>
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391
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+
<ul>
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392
|
+
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393
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<li>
|
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394
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+
<span class='object_link'><a href="Sequencescape/Api/ErrorHandling.html" title="Sequencescape::Api::ErrorHandling (module)">ErrorHandling</a></span>
|
|
395
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|
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396
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+
<small>(Sequencescape::Api)</small>
|
|
397
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+
|
|
398
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+
</li>
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399
|
+
|
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400
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+
</ul>
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401
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+
</ul>
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402
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+
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403
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404
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<ul id="alpha_F" class="alpha">
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405
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<li class="letter">F</li>
|
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406
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+
<ul>
|
|
407
|
+
|
|
408
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+
<li>
|
|
409
|
+
<span class='object_link'><a href="Sequencescape/Api/FinderMethods/FindByUuidHandler.html" title="Sequencescape::Api::FinderMethods::FindByUuidHandler (class)">FindByUuidHandler</a></span>
|
|
410
|
+
|
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411
|
+
<small>(Sequencescape::Api::FinderMethods)</small>
|
|
412
|
+
|
|
413
|
+
</li>
|
|
414
|
+
|
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415
|
+
<li>
|
|
416
|
+
<span class='object_link'><a href="Sequencescape/Api/FinderMethods.html" title="Sequencescape::Api::FinderMethods (module)">FinderMethods</a></span>
|
|
417
|
+
|
|
418
|
+
<small>(Sequencescape::Api)</small>
|
|
419
|
+
|
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420
|
+
</li>
|
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421
|
+
|
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422
|
+
</ul>
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423
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+
</ul>
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424
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+
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425
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426
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<ul id="alpha_G" class="alpha">
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427
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<li class="letter">G</li>
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428
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+
<ul>
|
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429
|
+
|
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430
|
+
<li>
|
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431
|
+
<span class='object_link'><a href="Sequencescape/Api/GeneralError.html" title="Sequencescape::Api::GeneralError (module)">GeneralError</a></span>
|
|
432
|
+
|
|
433
|
+
<small>(Sequencescape::Api)</small>
|
|
434
|
+
|
|
435
|
+
</li>
|
|
436
|
+
|
|
437
|
+
<li>
|
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438
|
+
<span class='object_link'><a href="Sequencescape/Tag/Group.html" title="Sequencescape::Tag::Group (class)">Group</a></span>
|
|
439
|
+
|
|
440
|
+
<small>(Sequencescape::Tag)</small>
|
|
441
|
+
|
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442
|
+
</li>
|
|
443
|
+
|
|
444
|
+
<li>
|
|
445
|
+
<span class='object_link'><a href="Sequencescape/Api/Resource/Groups.html" title="Sequencescape::Api::Resource::Groups (module)">Groups</a></span>
|
|
446
|
+
|
|
447
|
+
<small>(Sequencescape::Api::Resource)</small>
|
|
448
|
+
|
|
449
|
+
</li>
|
|
450
|
+
|
|
451
|
+
</ul>
|
|
452
|
+
</ul>
|
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453
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+
|
|
454
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+
|
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455
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</td><td valign='top' width="33%">
|
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456
|
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|
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457
|
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|
|
458
|
+
<ul id="alpha_H" class="alpha">
|
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459
|
+
<li class="letter">H</li>
|
|
460
|
+
<ul>
|
|
461
|
+
|
|
462
|
+
<li>
|
|
463
|
+
<span class='object_link'><a href="Sequencescape/Api/Associations/HasMany.html" title="Sequencescape::Api::Associations::HasMany (module)">HasMany</a></span>
|
|
464
|
+
|
|
465
|
+
<small>(Sequencescape::Api::Associations)</small>
|
|
466
|
+
|
|
467
|
+
</li>
|
|
468
|
+
|
|
469
|
+
<li>
|
|
470
|
+
<span class='object_link'><a href="Hash.html" title="Hash (class)">Hash</a></span>
|
|
471
|
+
|
|
472
|
+
</li>
|
|
473
|
+
|
|
474
|
+
<li>
|
|
475
|
+
<span class='object_link'><a href="Sequencescape/Api/ConnectionFactory/Helpers.html" title="Sequencescape::Api::ConnectionFactory::Helpers (module)">Helpers</a></span>
|
|
476
|
+
|
|
477
|
+
<small>(Sequencescape::Api::ConnectionFactory)</small>
|
|
478
|
+
|
|
479
|
+
</li>
|
|
480
|
+
|
|
481
|
+
</ul>
|
|
482
|
+
</ul>
|
|
483
|
+
|
|
484
|
+
|
|
485
|
+
<ul id="alpha_I" class="alpha">
|
|
486
|
+
<li class="letter">I</li>
|
|
487
|
+
<ul>
|
|
488
|
+
|
|
489
|
+
<li>
|
|
490
|
+
<span class='object_link'><a href="Sequencescape/Api/Associations/BelongsTo/InlineAssociationProxy.html" title="Sequencescape::Api::Associations::BelongsTo::InlineAssociationProxy (class)">InlineAssociationProxy</a></span>
|
|
491
|
+
|
|
492
|
+
<small>(Sequencescape::Api::Associations::BelongsTo)</small>
|
|
493
|
+
|
|
494
|
+
</li>
|
|
495
|
+
|
|
496
|
+
<li>
|
|
497
|
+
<span class='object_link'><a href="Sequencescape/Api/Associations/HasMany/InlineAssociationProxy.html" title="Sequencescape::Api::Associations::HasMany::InlineAssociationProxy (class)">InlineAssociationProxy</a></span>
|
|
498
|
+
|
|
499
|
+
<small>(Sequencescape::Api::Associations::HasMany)</small>
|
|
500
|
+
|
|
501
|
+
</li>
|
|
502
|
+
|
|
503
|
+
<li>
|
|
504
|
+
<span class='object_link'><a href="Sequencescape/Api/Actions/InstanceActionHelpers.html" title="Sequencescape::Api::Actions::InstanceActionHelpers (module)">InstanceActionHelpers</a></span>
|
|
505
|
+
|
|
506
|
+
<small>(Sequencescape::Api::Actions)</small>
|
|
507
|
+
|
|
508
|
+
</li>
|
|
509
|
+
|
|
510
|
+
<li>
|
|
511
|
+
<span class='object_link'><a href="Sequencescape/Api/Resource/Groups/InstanceMethods.html" title="Sequencescape::Api::Resource::Groups::InstanceMethods (module)">InstanceMethods</a></span>
|
|
512
|
+
|
|
513
|
+
<small>(Sequencescape::Api::Resource::Groups)</small>
|
|
514
|
+
|
|
515
|
+
</li>
|
|
516
|
+
|
|
517
|
+
<li>
|
|
518
|
+
<span class='object_link'><a href="Sequencescape/Api/Associations/InstanceMethods.html" title="Sequencescape::Api::Associations::InstanceMethods (module)">InstanceMethods</a></span>
|
|
519
|
+
|
|
520
|
+
<small>(Sequencescape::Api::Associations)</small>
|
|
521
|
+
|
|
522
|
+
</li>
|
|
523
|
+
|
|
524
|
+
<li>
|
|
525
|
+
<span class='object_link'><a href="Sequencescape/Api/Resource/Attributes/InstanceMethods.html" title="Sequencescape::Api::Resource::Attributes::InstanceMethods (module)">InstanceMethods</a></span>
|
|
526
|
+
|
|
527
|
+
<small>(Sequencescape::Api::Resource::Attributes)</small>
|
|
528
|
+
|
|
529
|
+
</li>
|
|
530
|
+
|
|
531
|
+
<li>
|
|
532
|
+
<span class='object_link'><a href="Sequencescape/Api/Resource/Groups/Proxy/InstanceMethods.html" title="Sequencescape::Api::Resource::Groups::Proxy::InstanceMethods (module)">InstanceMethods</a></span>
|
|
533
|
+
|
|
534
|
+
<small>(Sequencescape::Api::Resource::Groups::Proxy)</small>
|
|
535
|
+
|
|
536
|
+
</li>
|
|
537
|
+
|
|
538
|
+
<li>
|
|
539
|
+
<span class='object_link'><a href="Sequencescape/Api/Resource/InstanceMethods.html" title="Sequencescape::Api::Resource::InstanceMethods (module)">InstanceMethods</a></span>
|
|
540
|
+
|
|
541
|
+
<small>(Sequencescape::Api::Resource)</small>
|
|
542
|
+
|
|
543
|
+
</li>
|
|
544
|
+
|
|
545
|
+
<li>
|
|
546
|
+
<span class='object_link'><a href="Sequencescape/Api/Associations/Base/InstanceMethods.html" title="Sequencescape::Api::Associations::Base::InstanceMethods (module)">InstanceMethods</a></span>
|
|
547
|
+
|
|
548
|
+
<small>(Sequencescape::Api::Associations::Base)</small>
|
|
549
|
+
|
|
550
|
+
</li>
|
|
551
|
+
|
|
552
|
+
</ul>
|
|
553
|
+
</ul>
|
|
554
|
+
|
|
555
|
+
|
|
556
|
+
<ul id="alpha_J" class="alpha">
|
|
557
|
+
<li class="letter">J</li>
|
|
558
|
+
<ul>
|
|
559
|
+
|
|
560
|
+
<li>
|
|
561
|
+
<span class='object_link'><a href="Sequencescape/Api/Resource/Groups/Json.html" title="Sequencescape::Api::Resource::Groups::Json (module)">Json</a></span>
|
|
562
|
+
|
|
563
|
+
<small>(Sequencescape::Api::Resource::Groups)</small>
|
|
564
|
+
|
|
565
|
+
</li>
|
|
566
|
+
|
|
567
|
+
<li>
|
|
568
|
+
<span class='object_link'><a href="Sequencescape/Api/Resource/Json.html" title="Sequencescape::Api::Resource::Json (module)">Json</a></span>
|
|
569
|
+
|
|
570
|
+
<small>(Sequencescape::Api::Resource)</small>
|
|
571
|
+
|
|
572
|
+
</li>
|
|
573
|
+
|
|
574
|
+
<li>
|
|
575
|
+
<span class='object_link'><a href="Sequencescape/Api/Associations/HasMany/Json.html" title="Sequencescape::Api::Associations::HasMany::Json (module)">Json</a></span>
|
|
576
|
+
|
|
577
|
+
<small>(Sequencescape::Api::Associations::HasMany)</small>
|
|
578
|
+
|
|
579
|
+
</li>
|
|
580
|
+
|
|
581
|
+
<li>
|
|
582
|
+
<span class='object_link'><a href="Sequencescape/Api/JsonError.html" title="Sequencescape::Api::JsonError (class)">JsonError</a></span>
|
|
583
|
+
|
|
584
|
+
<small>(Sequencescape::Api)</small>
|
|
585
|
+
|
|
586
|
+
</li>
|
|
587
|
+
|
|
588
|
+
</ul>
|
|
589
|
+
</ul>
|
|
590
|
+
|
|
591
|
+
|
|
592
|
+
<ul id="alpha_L" class="alpha">
|
|
593
|
+
<li class="letter">L</li>
|
|
594
|
+
<ul>
|
|
595
|
+
|
|
596
|
+
<li>
|
|
597
|
+
<span class='object_link'><a href="Sequencescape/Behaviour/Labeled.html" title="Sequencescape::Behaviour::Labeled (module)">Labeled</a></span>
|
|
598
|
+
|
|
599
|
+
<small>(Sequencescape::Behaviour)</small>
|
|
600
|
+
|
|
601
|
+
</li>
|
|
602
|
+
|
|
603
|
+
<li>
|
|
604
|
+
<span class='object_link'><a href="Sequencescape/Lane.html" title="Sequencescape::Lane (class)">Lane</a></span>
|
|
605
|
+
|
|
606
|
+
<small>(Sequencescape)</small>
|
|
607
|
+
|
|
608
|
+
</li>
|
|
609
|
+
|
|
610
|
+
<li>
|
|
611
|
+
<span class='object_link'><a href="Sequencescape/LibraryEvent.html" title="Sequencescape::LibraryEvent (class)">LibraryEvent</a></span>
|
|
612
|
+
|
|
613
|
+
<small>(Sequencescape)</small>
|
|
614
|
+
|
|
615
|
+
</li>
|
|
616
|
+
|
|
617
|
+
<li>
|
|
618
|
+
<span class='object_link'><a href="Sequencescape/LibraryTube.html" title="Sequencescape::LibraryTube (class)">LibraryTube</a></span>
|
|
619
|
+
|
|
620
|
+
<small>(Sequencescape)</small>
|
|
621
|
+
|
|
622
|
+
</li>
|
|
623
|
+
|
|
624
|
+
<li>
|
|
625
|
+
<span class='object_link'><a href="Sequencescape/Api/Associations/BelongsTo/CommonBehaviour/LoadHandler.html" title="Sequencescape::Api::Associations::BelongsTo::CommonBehaviour::LoadHandler (class)">LoadHandler</a></span>
|
|
626
|
+
|
|
627
|
+
<small>(Sequencescape::Api::Associations::BelongsTo::CommonBehaviour)</small>
|
|
628
|
+
|
|
629
|
+
</li>
|
|
630
|
+
|
|
631
|
+
<li>
|
|
632
|
+
<span class='object_link'><a href="Sequencescape/Lot.html" title="Sequencescape::Lot (class)">Lot</a></span>
|
|
633
|
+
|
|
634
|
+
<small>(Sequencescape)</small>
|
|
635
|
+
|
|
636
|
+
</li>
|
|
637
|
+
|
|
638
|
+
<li>
|
|
639
|
+
<span class='object_link'><a href="Sequencescape/LotType/LotCreator.html" title="Sequencescape::LotType::LotCreator (module)">LotCreator</a></span>
|
|
640
|
+
|
|
641
|
+
<small>(Sequencescape::LotType)</small>
|
|
642
|
+
|
|
643
|
+
</li>
|
|
644
|
+
|
|
645
|
+
<li>
|
|
646
|
+
<span class='object_link'><a href="Sequencescape/LotType.html" title="Sequencescape::LotType (class)">LotType</a></span>
|
|
647
|
+
|
|
648
|
+
<small>(Sequencescape)</small>
|
|
649
|
+
|
|
650
|
+
</li>
|
|
651
|
+
|
|
652
|
+
</ul>
|
|
653
|
+
</ul>
|
|
654
|
+
|
|
655
|
+
|
|
656
|
+
<ul id="alpha_M" class="alpha">
|
|
657
|
+
<li class="letter">M</li>
|
|
658
|
+
<ul>
|
|
659
|
+
|
|
660
|
+
<li>
|
|
661
|
+
<span class='object_link'><a href="Sequencescape/Api/Resource/Modifications.html" title="Sequencescape::Api::Resource::Modifications (module)">Modifications</a></span>
|
|
662
|
+
|
|
663
|
+
<small>(Sequencescape::Api::Resource)</small>
|
|
664
|
+
|
|
665
|
+
</li>
|
|
666
|
+
|
|
667
|
+
<li>
|
|
668
|
+
<span class='object_link'><a href="Sequencescape/Api/ModifyingHandler.html" title="Sequencescape::Api::ModifyingHandler (class)">ModifyingHandler</a></span>
|
|
669
|
+
|
|
670
|
+
<small>(Sequencescape::Api)</small>
|
|
671
|
+
|
|
672
|
+
</li>
|
|
673
|
+
|
|
674
|
+
<li>
|
|
675
|
+
<span class='object_link'><a href="Sequencescape/Search/MultipleResultHandler.html" title="Sequencescape::Search::MultipleResultHandler (class)">MultipleResultHandler</a></span>
|
|
676
|
+
|
|
677
|
+
<small>(Sequencescape::Search)</small>
|
|
678
|
+
|
|
679
|
+
</li>
|
|
680
|
+
|
|
681
|
+
<li>
|
|
682
|
+
<span class='object_link'><a href="Sequencescape/MultiplexedLibraryTube.html" title="Sequencescape::MultiplexedLibraryTube (class)">MultiplexedLibraryTube</a></span>
|
|
683
|
+
|
|
684
|
+
<small>(Sequencescape)</small>
|
|
685
|
+
|
|
686
|
+
</li>
|
|
687
|
+
|
|
688
|
+
</ul>
|
|
689
|
+
</ul>
|
|
690
|
+
|
|
691
|
+
|
|
692
|
+
<ul id="alpha_N" class="alpha">
|
|
693
|
+
<li class="letter">N</li>
|
|
694
|
+
<ul>
|
|
695
|
+
|
|
696
|
+
<li>
|
|
697
|
+
<span class='object_link'><a href="NilClass.html" title="NilClass (class)">NilClass</a></span>
|
|
698
|
+
|
|
699
|
+
</li>
|
|
700
|
+
|
|
701
|
+
</ul>
|
|
702
|
+
</ul>
|
|
703
|
+
|
|
704
|
+
|
|
705
|
+
<ul id="alpha_O" class="alpha">
|
|
706
|
+
<li class="letter">O</li>
|
|
707
|
+
<ul>
|
|
708
|
+
|
|
709
|
+
<li>
|
|
710
|
+
<span class='object_link'><a href="Sequencescape/Order.html" title="Sequencescape::Order (class)">Order</a></span>
|
|
711
|
+
|
|
712
|
+
<small>(Sequencescape)</small>
|
|
713
|
+
|
|
714
|
+
</li>
|
|
715
|
+
|
|
716
|
+
<li>
|
|
717
|
+
<span class='object_link'><a href="Sequencescape/OrderTemplate/OrderCreator.html" title="Sequencescape::OrderTemplate::OrderCreator (module)">OrderCreator</a></span>
|
|
718
|
+
|
|
719
|
+
<small>(Sequencescape::OrderTemplate)</small>
|
|
720
|
+
|
|
721
|
+
</li>
|
|
722
|
+
|
|
723
|
+
<li>
|
|
724
|
+
<span class='object_link'><a href="Sequencescape/OrderTemplate.html" title="Sequencescape::OrderTemplate (class)">OrderTemplate</a></span>
|
|
725
|
+
|
|
726
|
+
<small>(Sequencescape)</small>
|
|
727
|
+
|
|
728
|
+
</li>
|
|
729
|
+
|
|
730
|
+
</ul>
|
|
731
|
+
</ul>
|
|
732
|
+
|
|
733
|
+
|
|
734
|
+
<ul id="alpha_P" class="alpha">
|
|
735
|
+
<li class="letter">P</li>
|
|
736
|
+
<ul>
|
|
737
|
+
|
|
738
|
+
<li>
|
|
739
|
+
<span class='object_link'><a href="Sequencescape/Api/PageOfResults.html" title="Sequencescape::Api::PageOfResults (class)">PageOfResults</a></span>
|
|
740
|
+
|
|
741
|
+
<small>(Sequencescape::Api)</small>
|
|
742
|
+
|
|
743
|
+
</li>
|
|
744
|
+
|
|
745
|
+
<li>
|
|
746
|
+
<span class='object_link'><a href="Sequencescape/Pipeline.html" title="Sequencescape::Pipeline (class)">Pipeline</a></span>
|
|
747
|
+
|
|
748
|
+
<small>(Sequencescape)</small>
|
|
749
|
+
|
|
750
|
+
</li>
|
|
751
|
+
|
|
752
|
+
<li>
|
|
753
|
+
<span class='object_link'><a href="Sequencescape/Plate.html" title="Sequencescape::Plate (class)">Plate</a></span>
|
|
754
|
+
|
|
755
|
+
<small>(Sequencescape)</small>
|
|
756
|
+
|
|
757
|
+
</li>
|
|
758
|
+
|
|
759
|
+
<li>
|
|
760
|
+
<span class='object_link'><a href="Sequencescape/PlateConversion.html" title="Sequencescape::PlateConversion (class)">PlateConversion</a></span>
|
|
761
|
+
|
|
762
|
+
<small>(Sequencescape)</small>
|
|
763
|
+
|
|
764
|
+
</li>
|
|
765
|
+
|
|
766
|
+
<li>
|
|
767
|
+
<span class='object_link'><a href="Sequencescape/PlateCreation.html" title="Sequencescape::PlateCreation (class)">PlateCreation</a></span>
|
|
768
|
+
|
|
769
|
+
<small>(Sequencescape)</small>
|
|
770
|
+
|
|
771
|
+
</li>
|
|
772
|
+
|
|
773
|
+
<li>
|
|
774
|
+
<span class='object_link'><a href="Sequencescape/PlatePurpose/PlateCreation.html" title="Sequencescape::PlatePurpose::PlateCreation (module)">PlateCreation</a></span>
|
|
775
|
+
|
|
776
|
+
<small>(Sequencescape::PlatePurpose)</small>
|
|
777
|
+
|
|
778
|
+
</li>
|
|
779
|
+
|
|
780
|
+
<li>
|
|
781
|
+
<span class='object_link'><a href="Sequencescape/PlatePurpose.html" title="Sequencescape::PlatePurpose (class)">PlatePurpose</a></span>
|
|
782
|
+
|
|
783
|
+
<small>(Sequencescape)</small>
|
|
784
|
+
|
|
785
|
+
</li>
|
|
786
|
+
|
|
787
|
+
<li>
|
|
788
|
+
<span class='object_link'><a href="Sequencescape/PlateTemplate.html" title="Sequencescape::PlateTemplate (class)">PlateTemplate</a></span>
|
|
789
|
+
|
|
790
|
+
<small>(Sequencescape)</small>
|
|
791
|
+
|
|
792
|
+
</li>
|
|
793
|
+
|
|
794
|
+
<li>
|
|
795
|
+
<span class='object_link'><a href="Sequencescape/PooledPlateCreation.html" title="Sequencescape::PooledPlateCreation (class)">PooledPlateCreation</a></span>
|
|
796
|
+
|
|
797
|
+
<small>(Sequencescape)</small>
|
|
798
|
+
|
|
799
|
+
</li>
|
|
800
|
+
|
|
801
|
+
<li>
|
|
802
|
+
<span class='object_link'><a href="Sequencescape/Plate/Pooling.html" title="Sequencescape::Plate::Pooling (module)">Pooling</a></span>
|
|
803
|
+
|
|
804
|
+
<small>(Sequencescape::Plate)</small>
|
|
805
|
+
|
|
806
|
+
</li>
|
|
807
|
+
|
|
808
|
+
<li>
|
|
809
|
+
<span class='object_link'><a href="Sequencescape/Project.html" title="Sequencescape::Project (class)">Project</a></span>
|
|
810
|
+
|
|
811
|
+
<small>(Sequencescape)</small>
|
|
812
|
+
|
|
813
|
+
</li>
|
|
814
|
+
|
|
815
|
+
<li>
|
|
816
|
+
<span class='object_link'><a href="Sequencescape/Api/Resource/Groups/Proxy.html" title="Sequencescape::Api::Resource::Groups::Proxy (class)">Proxy</a></span>
|
|
817
|
+
|
|
818
|
+
<small>(Sequencescape::Api::Resource::Groups)</small>
|
|
819
|
+
|
|
820
|
+
</li>
|
|
821
|
+
|
|
822
|
+
</ul>
|
|
823
|
+
</ul>
|
|
824
|
+
|
|
825
|
+
|
|
826
|
+
</td><td valign='top' width="33%">
|
|
827
|
+
|
|
828
|
+
|
|
829
|
+
<ul id="alpha_Q" class="alpha">
|
|
830
|
+
<li class="letter">Q</li>
|
|
831
|
+
<ul>
|
|
832
|
+
|
|
833
|
+
<li>
|
|
834
|
+
<span class='object_link'><a href="Sequencescape/QcDecision.html" title="Sequencescape::QcDecision (class)">QcDecision</a></span>
|
|
835
|
+
|
|
836
|
+
<small>(Sequencescape)</small>
|
|
837
|
+
|
|
838
|
+
</li>
|
|
839
|
+
|
|
840
|
+
<li>
|
|
841
|
+
<span class='object_link'><a href="Sequencescape/QcFile.html" title="Sequencescape::QcFile (class)">QcFile</a></span>
|
|
842
|
+
|
|
843
|
+
<small>(Sequencescape)</small>
|
|
844
|
+
|
|
845
|
+
</li>
|
|
846
|
+
|
|
847
|
+
<li>
|
|
848
|
+
<span class='object_link'><a href="Sequencescape/Behaviour/Qced/QcFile.html" title="Sequencescape::Behaviour::Qced::QcFile (module)">QcFile</a></span>
|
|
849
|
+
|
|
850
|
+
<small>(Sequencescape::Behaviour::Qced)</small>
|
|
851
|
+
|
|
852
|
+
</li>
|
|
853
|
+
|
|
854
|
+
<li>
|
|
855
|
+
<span class='object_link'><a href="Sequencescape/Qcable.html" title="Sequencescape::Qcable (class)">Qcable</a></span>
|
|
856
|
+
|
|
857
|
+
<small>(Sequencescape)</small>
|
|
858
|
+
|
|
859
|
+
</li>
|
|
860
|
+
|
|
861
|
+
<li>
|
|
862
|
+
<span class='object_link'><a href="Sequencescape/QcableCreator.html" title="Sequencescape::QcableCreator (class)">QcableCreator</a></span>
|
|
863
|
+
|
|
864
|
+
<small>(Sequencescape)</small>
|
|
865
|
+
|
|
866
|
+
</li>
|
|
867
|
+
|
|
868
|
+
<li>
|
|
869
|
+
<span class='object_link'><a href="Sequencescape/Behaviour/Qced.html" title="Sequencescape::Behaviour::Qced (module)">Qced</a></span>
|
|
870
|
+
|
|
871
|
+
<small>(Sequencescape::Behaviour)</small>
|
|
872
|
+
|
|
873
|
+
</li>
|
|
874
|
+
|
|
875
|
+
</ul>
|
|
876
|
+
</ul>
|
|
877
|
+
|
|
878
|
+
|
|
879
|
+
<ul id="alpha_R" class="alpha">
|
|
880
|
+
<li class="letter">R</li>
|
|
881
|
+
<ul>
|
|
882
|
+
|
|
883
|
+
<li>
|
|
884
|
+
<span class='object_link'><a href="Sequencescape/Api/Rails.html" title="Sequencescape::Api::Rails (module)">Rails</a></span>
|
|
885
|
+
|
|
886
|
+
<small>(Sequencescape::Api)</small>
|
|
887
|
+
|
|
888
|
+
</li>
|
|
889
|
+
|
|
890
|
+
<li>
|
|
891
|
+
<span class='object_link'><a href="Sequencescape/Behaviour/Receptacle.html" title="Sequencescape::Behaviour::Receptacle (module)">Receptacle</a></span>
|
|
892
|
+
|
|
893
|
+
<small>(Sequencescape::Behaviour)</small>
|
|
894
|
+
|
|
895
|
+
</li>
|
|
896
|
+
|
|
897
|
+
<li>
|
|
898
|
+
<span class='object_link'><a href="Sequencescape/Request.html" title="Sequencescape::Request (class)">Request</a></span>
|
|
899
|
+
|
|
900
|
+
<small>(Sequencescape)</small>
|
|
901
|
+
|
|
902
|
+
</li>
|
|
903
|
+
|
|
904
|
+
<li>
|
|
905
|
+
<span class='object_link'><a href="Sequencescape/Api/Resource.html" title="Sequencescape::Api::Resource (class)">Resource</a></span>
|
|
906
|
+
|
|
907
|
+
<small>(Sequencescape::Api)</small>
|
|
908
|
+
|
|
909
|
+
</li>
|
|
910
|
+
|
|
911
|
+
<li>
|
|
912
|
+
<span class='object_link'><a href="Sequencescape/Api/ResourceInvalid.html" title="Sequencescape::Api::ResourceInvalid (class)">ResourceInvalid</a></span>
|
|
913
|
+
|
|
914
|
+
<small>(Sequencescape::Api)</small>
|
|
915
|
+
|
|
916
|
+
</li>
|
|
917
|
+
|
|
918
|
+
<li>
|
|
919
|
+
<span class='object_link'><a href="Sequencescape/Api/ResourceModelProxy.html" title="Sequencescape::Api::ResourceModelProxy (class)">ResourceModelProxy</a></span>
|
|
920
|
+
|
|
921
|
+
<small>(Sequencescape::Api)</small>
|
|
922
|
+
|
|
923
|
+
</li>
|
|
924
|
+
|
|
925
|
+
<li>
|
|
926
|
+
<span class='object_link'><a href="Sequencescape/Api/Rails/Resourced.html" title="Sequencescape::Api::Rails::Resourced (module)">Resourced</a></span>
|
|
927
|
+
|
|
928
|
+
<small>(Sequencescape::Api::Rails)</small>
|
|
929
|
+
|
|
930
|
+
</li>
|
|
931
|
+
|
|
932
|
+
<li>
|
|
933
|
+
<span class='object_link'><a href="Sequencescape/Robot.html" title="Sequencescape::Robot (class)">Robot</a></span>
|
|
934
|
+
|
|
935
|
+
<small>(Sequencescape)</small>
|
|
936
|
+
|
|
937
|
+
</li>
|
|
938
|
+
|
|
939
|
+
</ul>
|
|
940
|
+
</ul>
|
|
941
|
+
|
|
942
|
+
|
|
943
|
+
<ul id="alpha_S" class="alpha">
|
|
944
|
+
<li class="letter">S</li>
|
|
945
|
+
<ul>
|
|
946
|
+
|
|
947
|
+
<li>
|
|
948
|
+
<span class='object_link'><a href="Sequencescape/Sample.html" title="Sequencescape::Sample (class)">Sample</a></span>
|
|
949
|
+
|
|
950
|
+
<small>(Sequencescape)</small>
|
|
951
|
+
|
|
952
|
+
</li>
|
|
953
|
+
|
|
954
|
+
<li>
|
|
955
|
+
<span class='object_link'><a href="Sequencescape/SampleTube.html" title="Sequencescape::SampleTube (class)">SampleTube</a></span>
|
|
956
|
+
|
|
957
|
+
<small>(Sequencescape)</small>
|
|
958
|
+
|
|
959
|
+
</li>
|
|
960
|
+
|
|
961
|
+
<li>
|
|
962
|
+
<span class='object_link'><a href="Sequencescape/Search.html" title="Sequencescape::Search (class)">Search</a></span>
|
|
963
|
+
|
|
964
|
+
<small>(Sequencescape)</small>
|
|
965
|
+
|
|
966
|
+
</li>
|
|
967
|
+
|
|
968
|
+
<li>
|
|
969
|
+
<span class='object_link'><a href="Sequencescape.html" title="Sequencescape (module)">Sequencescape</a></span>
|
|
970
|
+
|
|
971
|
+
</li>
|
|
972
|
+
|
|
973
|
+
<li>
|
|
974
|
+
<span class='object_link'><a href="Sequencescape/Search/SingleResultHandler.html" title="Sequencescape::Search::SingleResultHandler (class)">SingleResultHandler</a></span>
|
|
975
|
+
|
|
976
|
+
<small>(Sequencescape::Search)</small>
|
|
977
|
+
|
|
978
|
+
</li>
|
|
979
|
+
|
|
980
|
+
<li>
|
|
981
|
+
<span class='object_link'><a href="Sequencescape/SpecificTubeCreation.html" title="Sequencescape::SpecificTubeCreation (class)">SpecificTubeCreation</a></span>
|
|
982
|
+
|
|
983
|
+
<small>(Sequencescape)</small>
|
|
984
|
+
|
|
985
|
+
</li>
|
|
986
|
+
|
|
987
|
+
<li>
|
|
988
|
+
<span class='object_link'><a href="Sequencescape/Stamp.html" title="Sequencescape::Stamp (class)">Stamp</a></span>
|
|
989
|
+
|
|
990
|
+
<small>(Sequencescape)</small>
|
|
991
|
+
|
|
992
|
+
</li>
|
|
993
|
+
|
|
994
|
+
<li>
|
|
995
|
+
<span class='object_link'><a href="Sequencescape/StateChange.html" title="Sequencescape::StateChange (class)">StateChange</a></span>
|
|
996
|
+
|
|
997
|
+
<small>(Sequencescape)</small>
|
|
998
|
+
|
|
999
|
+
</li>
|
|
1000
|
+
|
|
1001
|
+
<li>
|
|
1002
|
+
<span class='object_link'><a href="Sequencescape/Behaviour/StateDriven.html" title="Sequencescape::Behaviour::StateDriven (module)">StateDriven</a></span>
|
|
1003
|
+
|
|
1004
|
+
<small>(Sequencescape::Behaviour)</small>
|
|
1005
|
+
|
|
1006
|
+
</li>
|
|
1007
|
+
|
|
1008
|
+
<li>
|
|
1009
|
+
<span class='object_link'><a href="Sequencescape/Study.html" title="Sequencescape::Study (class)">Study</a></span>
|
|
1010
|
+
|
|
1011
|
+
<small>(Sequencescape)</small>
|
|
1012
|
+
|
|
1013
|
+
</li>
|
|
1014
|
+
|
|
1015
|
+
<li>
|
|
1016
|
+
<span class='object_link'><a href="Sequencescape/Submission.html" title="Sequencescape::Submission (class)">Submission</a></span>
|
|
1017
|
+
|
|
1018
|
+
<small>(Sequencescape)</small>
|
|
1019
|
+
|
|
1020
|
+
</li>
|
|
1021
|
+
|
|
1022
|
+
<li>
|
|
1023
|
+
<span class='object_link'><a href="Sequencescape/SubmissionPool.html" title="Sequencescape::SubmissionPool (class)">SubmissionPool</a></span>
|
|
1024
|
+
|
|
1025
|
+
<small>(Sequencescape)</small>
|
|
1026
|
+
|
|
1027
|
+
</li>
|
|
1028
|
+
|
|
1029
|
+
</ul>
|
|
1030
|
+
</ul>
|
|
1031
|
+
|
|
1032
|
+
|
|
1033
|
+
<ul id="alpha_T" class="alpha">
|
|
1034
|
+
<li class="letter">T</li>
|
|
1035
|
+
<ul>
|
|
1036
|
+
|
|
1037
|
+
<li>
|
|
1038
|
+
<span class='object_link'><a href="Sequencescape/Tag.html" title="Sequencescape::Tag (class)">Tag</a></span>
|
|
1039
|
+
|
|
1040
|
+
<small>(Sequencescape)</small>
|
|
1041
|
+
|
|
1042
|
+
</li>
|
|
1043
|
+
|
|
1044
|
+
<li>
|
|
1045
|
+
<span class='object_link'><a href="Sequencescape/Tag2Layout.html" title="Sequencescape::Tag2Layout (class)">Tag2Layout</a></span>
|
|
1046
|
+
|
|
1047
|
+
<small>(Sequencescape)</small>
|
|
1048
|
+
|
|
1049
|
+
</li>
|
|
1050
|
+
|
|
1051
|
+
<li>
|
|
1052
|
+
<span class='object_link'><a href="Sequencescape/Tag2LayoutTemplate.html" title="Sequencescape::Tag2LayoutTemplate (class)">Tag2LayoutTemplate</a></span>
|
|
1053
|
+
|
|
1054
|
+
<small>(Sequencescape)</small>
|
|
1055
|
+
|
|
1056
|
+
</li>
|
|
1057
|
+
|
|
1058
|
+
<li>
|
|
1059
|
+
<span class='object_link'><a href="Sequencescape/TagGroup.html" title="Sequencescape::TagGroup (class)">TagGroup</a></span>
|
|
1060
|
+
|
|
1061
|
+
<small>(Sequencescape)</small>
|
|
1062
|
+
|
|
1063
|
+
</li>
|
|
1064
|
+
|
|
1065
|
+
<li>
|
|
1066
|
+
<span class='object_link'><a href="Sequencescape/TagLayout.html" title="Sequencescape::TagLayout (class)">TagLayout</a></span>
|
|
1067
|
+
|
|
1068
|
+
<small>(Sequencescape)</small>
|
|
1069
|
+
|
|
1070
|
+
</li>
|
|
1071
|
+
|
|
1072
|
+
<li>
|
|
1073
|
+
<span class='object_link'><a href="Sequencescape/TagLayoutTemplate.html" title="Sequencescape::TagLayoutTemplate (class)">TagLayoutTemplate</a></span>
|
|
1074
|
+
|
|
1075
|
+
<small>(Sequencescape)</small>
|
|
1076
|
+
|
|
1077
|
+
</li>
|
|
1078
|
+
|
|
1079
|
+
<li>
|
|
1080
|
+
<span class='object_link'><a href="Sequencescape/Api/Composition/Target.html" title="Sequencescape::Api::Composition::Target (module)">Target</a></span>
|
|
1081
|
+
|
|
1082
|
+
<small>(Sequencescape::Api::Composition)</small>
|
|
1083
|
+
|
|
1084
|
+
</li>
|
|
1085
|
+
|
|
1086
|
+
<li>
|
|
1087
|
+
<span class='object_link'><a href="Sequencescape/Template.html" title="Sequencescape::Template (class)">Template</a></span>
|
|
1088
|
+
|
|
1089
|
+
<small>(Sequencescape)</small>
|
|
1090
|
+
|
|
1091
|
+
</li>
|
|
1092
|
+
|
|
1093
|
+
<li>
|
|
1094
|
+
<span class='object_link'><a href="Sequencescape/Transfer.html" title="Sequencescape::Transfer (class)">Transfer</a></span>
|
|
1095
|
+
|
|
1096
|
+
<small>(Sequencescape)</small>
|
|
1097
|
+
|
|
1098
|
+
</li>
|
|
1099
|
+
|
|
1100
|
+
<li>
|
|
1101
|
+
<span class='object_link'><a href="Sequencescape/TransferTemplate.html" title="Sequencescape::TransferTemplate (class)">TransferTemplate</a></span>
|
|
1102
|
+
|
|
1103
|
+
<small>(Sequencescape)</small>
|
|
1104
|
+
|
|
1105
|
+
</li>
|
|
1106
|
+
|
|
1107
|
+
<li>
|
|
1108
|
+
<span class='object_link'><a href="Sequencescape/Tube.html" title="Sequencescape::Tube (class)">Tube</a></span>
|
|
1109
|
+
|
|
1110
|
+
<small>(Sequencescape)</small>
|
|
1111
|
+
|
|
1112
|
+
</li>
|
|
1113
|
+
|
|
1114
|
+
<li>
|
|
1115
|
+
<span class='object_link'><a href="Sequencescape/TubeCreation.html" title="Sequencescape::TubeCreation (class)">TubeCreation</a></span>
|
|
1116
|
+
|
|
1117
|
+
<small>(Sequencescape)</small>
|
|
1118
|
+
|
|
1119
|
+
</li>
|
|
1120
|
+
|
|
1121
|
+
<li>
|
|
1122
|
+
<span class='object_link'><a href="Sequencescape/TubePurpose/TubeCreation.html" title="Sequencescape::TubePurpose::TubeCreation (module)">TubeCreation</a></span>
|
|
1123
|
+
|
|
1124
|
+
<small>(Sequencescape::TubePurpose)</small>
|
|
1125
|
+
|
|
1126
|
+
</li>
|
|
1127
|
+
|
|
1128
|
+
<li>
|
|
1129
|
+
<span class='object_link'><a href="Sequencescape/TubeFromTubeCreation.html" title="Sequencescape::TubeFromTubeCreation (class)">TubeFromTubeCreation</a></span>
|
|
1130
|
+
|
|
1131
|
+
<small>(Sequencescape)</small>
|
|
1132
|
+
|
|
1133
|
+
</li>
|
|
1134
|
+
|
|
1135
|
+
<li>
|
|
1136
|
+
<span class='object_link'><a href="Sequencescape/TubePurpose.html" title="Sequencescape::TubePurpose (class)">TubePurpose</a></span>
|
|
1137
|
+
|
|
1138
|
+
<small>(Sequencescape)</small>
|
|
1139
|
+
|
|
1140
|
+
</li>
|
|
1141
|
+
|
|
1142
|
+
<li>
|
|
1143
|
+
<span class='object_link'><a href="Sequencescape/Api/ErrorHandling/TurnOffValidationOfUuidOnlyRecords.html" title="Sequencescape::Api::ErrorHandling::TurnOffValidationOfUuidOnlyRecords (module)">TurnOffValidationOfUuidOnlyRecords</a></span>
|
|
1144
|
+
|
|
1145
|
+
<small>(Sequencescape::Api::ErrorHandling)</small>
|
|
1146
|
+
|
|
1147
|
+
</li>
|
|
1148
|
+
|
|
1149
|
+
</ul>
|
|
1150
|
+
</ul>
|
|
1151
|
+
|
|
1152
|
+
|
|
1153
|
+
<ul id="alpha_U" class="alpha">
|
|
1154
|
+
<li class="letter">U</li>
|
|
1155
|
+
<ul>
|
|
1156
|
+
|
|
1157
|
+
<li>
|
|
1158
|
+
<span class='object_link'><a href="Sequencescape/Api/PageOfResults/UpdateHandler.html" title="Sequencescape::Api::PageOfResults::UpdateHandler (class)">UpdateHandler</a></span>
|
|
1159
|
+
|
|
1160
|
+
<small>(Sequencescape::Api::PageOfResults)</small>
|
|
1161
|
+
|
|
1162
|
+
</li>
|
|
1163
|
+
|
|
1164
|
+
<li>
|
|
1165
|
+
<span class='object_link'><a href="Sequencescape/User.html" title="Sequencescape::User (class)">User</a></span>
|
|
1166
|
+
|
|
1167
|
+
<small>(Sequencescape)</small>
|
|
1168
|
+
|
|
1169
|
+
</li>
|
|
1170
|
+
|
|
1171
|
+
</ul>
|
|
1172
|
+
</ul>
|
|
1173
|
+
|
|
1174
|
+
|
|
1175
|
+
<ul id="alpha_V" class="alpha">
|
|
1176
|
+
<li class="letter">V</li>
|
|
1177
|
+
<ul>
|
|
1178
|
+
|
|
1179
|
+
<li>
|
|
1180
|
+
<span class='object_link'><a href="Sequencescape/Api/Associations/HasMany/Validation.html" title="Sequencescape::Api::Associations::HasMany::Validation (module)">Validation</a></span>
|
|
1181
|
+
|
|
1182
|
+
<small>(Sequencescape::Api::Associations::HasMany)</small>
|
|
1183
|
+
|
|
1184
|
+
</li>
|
|
1185
|
+
|
|
1186
|
+
<li>
|
|
1187
|
+
<span class='object_link'><a href="Sequencescape/Api/Version1.html" title="Sequencescape::Api::Version1 (class)">Version1</a></span>
|
|
1188
|
+
|
|
1189
|
+
<small>(Sequencescape::Api)</small>
|
|
1190
|
+
|
|
1191
|
+
</li>
|
|
1192
|
+
|
|
1193
|
+
<li>
|
|
1194
|
+
<span class='object_link'><a href="Sequencescape/Api/Version2.html" title="Sequencescape::Api::Version2 (class)">Version2</a></span>
|
|
1195
|
+
|
|
1196
|
+
<small>(Sequencescape::Api)</small>
|
|
1197
|
+
|
|
1198
|
+
</li>
|
|
1199
|
+
|
|
1200
|
+
<li>
|
|
1201
|
+
<span class='object_link'><a href="Sequencescape/VolumeUpdate.html" title="Sequencescape::VolumeUpdate (class)">VolumeUpdate</a></span>
|
|
1202
|
+
|
|
1203
|
+
<small>(Sequencescape)</small>
|
|
1204
|
+
|
|
1205
|
+
</li>
|
|
1206
|
+
|
|
1207
|
+
</ul>
|
|
1208
|
+
</ul>
|
|
1209
|
+
|
|
1210
|
+
|
|
1211
|
+
<ul id="alpha_W" class="alpha">
|
|
1212
|
+
<li class="letter">W</li>
|
|
1213
|
+
<ul>
|
|
1214
|
+
|
|
1215
|
+
<li>
|
|
1216
|
+
<span class='object_link'><a href="Sequencescape/Well.html" title="Sequencescape::Well (class)">Well</a></span>
|
|
1217
|
+
|
|
1218
|
+
<small>(Sequencescape)</small>
|
|
1219
|
+
|
|
1220
|
+
</li>
|
|
1221
|
+
|
|
1222
|
+
<li>
|
|
1223
|
+
<span class='object_link'><a href="Sequencescape/Plate/WellStructure.html" title="Sequencescape::Plate::WellStructure (module)">WellStructure</a></span>
|
|
1224
|
+
|
|
1225
|
+
<small>(Sequencescape::Plate)</small>
|
|
1226
|
+
|
|
1227
|
+
</li>
|
|
1228
|
+
|
|
1229
|
+
</ul>
|
|
1230
|
+
</ul>
|
|
1231
|
+
|
|
1232
|
+
</td>
|
|
1233
|
+
</tr>
|
|
1234
|
+
</table>
|
|
1235
|
+
|
|
1236
|
+
</div>
|
|
1237
|
+
|
|
1238
|
+
</div>
|
|
1239
|
+
|
|
1240
|
+
<div id="footer">
|
|
1241
|
+
Generated on Wed Nov 16 16:31:13 2016 by
|
|
1242
|
+
<a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
|
|
1243
|
+
0.9.5 (ruby-2.3.0).
|
|
1244
|
+
</div>
|
|
1245
|
+
|
|
1246
|
+
</div>
|
|
1247
|
+
</body>
|
|
1248
|
+
</html>
|