roebe 0.5.187
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- checksums.yaml +7 -0
- data/README.md +5852 -0
- data/bin/blinking_cursor +7 -0
- data/bin/browser +7 -0
- data/bin/colourized_tokenitor1 +7 -0
- data/bin/colourized_tokenitor2 +7 -0
- data/bin/colourized_tokenitor3 +7 -0
- data/bin/colourized_tokenitor4 +7 -0
- data/bin/colourized_tokenitor5 +7 -0
- data/bin/compare_these_two_directories +7 -0
- data/bin/create_file_skeleton +7 -0
- data/bin/create_my_directories +7 -0
- data/bin/create_wpa_supplicant_build_file +7 -0
- data/bin/create_zip +7 -0
- data/bin/custom_invoke +28 -0
- data/bin/delete_empty_files +7 -0
- data/bin/display_gcc_version +7 -0
- data/bin/do_a_google_search +7 -0
- data/bin/extract_gem_file +7 -0
- data/bin/fragment_maker +7 -0
- data/bin/generate_fstab_file +7 -0
- data/bin/handle_xorg_related_boot_phase +7 -0
- data/bin/hello_world +7 -0
- data/bin/in +7 -0
- data/bin/increment_application_version +7 -0
- data/bin/increment_application_version_then_push_the_gem +13 -0
- data/bin/install_all_registered_fonts +7 -0
- data/bin/install_jruby_addons +7 -0
- data/bin/install_my_addons +97 -0
- data/bin/install_my_addons.rb +97 -0
- data/bin/interactive_file_creator +7 -0
- data/bin/java_compile_statically +11 -0
- data/bin/kill_firefox +7 -0
- data/bin/kill_palemoon +7 -0
- data/bin/konsole_title +7 -0
- data/bin/larrow +7 -0
- data/bin/log10 +7 -0
- data/bin/menugenerator +7 -0
- data/bin/modify_shebang_header +7 -0
- data/bin/openpdf1 +7 -0
- data/bin/openpdf2 +7 -0
- data/bin/openpdf3 +7 -0
- data/bin/openpdf4 +7 -0
- data/bin/openpdf5 +7 -0
- data/bin/openpdf6 +7 -0
- data/bin/openpdf7 +7 -0
- data/bin/openpdf8 +7 -0
- data/bin/openpdf9 +7 -0
- data/bin/passwords +7 -0
- data/bin/path_generator +7 -0
- data/bin/print_this_unicode_symbol +7 -0
- data/bin/quick_colour_test +13 -0
- data/bin/rarrow +7 -0
- data/bin/rdate +7 -0
- data/bin/remove_this_substring_from_all_files +7 -0
- data/bin/replace_space_with_underscore +7 -0
- data/bin/rfirefox +7 -0
- data/bin/rinstall2 +7 -0
- data/bin/roebe +7 -0
- data/bin/roebe_documentation +7 -0
- data/bin/roebeshell +11 -0
- data/bin/ruby_cat +7 -0
- data/bin/ruby_dhcpcd +7 -0
- data/bin/run +7 -0
- data/bin/rxinitrc +7 -0
- data/bin/set_alias_1 +7 -0
- data/bin/set_alias_10 +7 -0
- data/bin/set_alias_11 +7 -0
- data/bin/set_alias_12 +7 -0
- data/bin/set_alias_13 +7 -0
- data/bin/set_alias_14 +7 -0
- data/bin/set_alias_15 +7 -0
- data/bin/set_alias_2 +7 -0
- data/bin/set_alias_3 +7 -0
- data/bin/set_alias_4 +7 -0
- data/bin/set_alias_5 +7 -0
- data/bin/set_alias_6 +7 -0
- data/bin/set_alias_7 +7 -0
- data/bin/set_alias_8 +7 -0
- data/bin/set_alias_9 +7 -0
- data/bin/set_browser +7 -0
- data/bin/setpdf1 +7 -0
- data/bin/setpdf2 +7 -0
- data/bin/setpdf3 +7 -0
- data/bin/setpdf4 +7 -0
- data/bin/setpdf5 +7 -0
- data/bin/setpdf6 +7 -0
- data/bin/setpdf7 +7 -0
- data/bin/setpdf8 +7 -0
- data/bin/setpdf9 +7 -0
- data/bin/show_available_users +7 -0
- data/bin/show_ten_aliases +7 -0
- data/bin/simple_extractor +9 -0
- data/bin/start_lighty +7 -0
- data/bin/symlink_directories_from_that_directory_to_the_current_directory +7 -0
- data/bin/symlink_everything_from_that_directory_to_this_directory +7 -0
- data/bin/symlink_files_from_that_directory_to_the_current_directory +7 -0
- data/bin/take_screenshot +7 -0
- data/bin/to_binary +7 -0
- data/bin/tokenitor +7 -0
- data/bin/vim_paradise +7 -0
- data/bin/wlan +7 -0
- data/bin/word_count +7 -0
- data/bin/write_what_into +7 -0
- data/bin/yaml_check +7 -0
- data/doc/README.gen +5790 -0
- data/doc/add_ons_for_ruby/README.md +3 -0
- data/doc/add_ons_for_ruby/activerecord.md +99 -0
- data/doc/add_ons_for_ruby/ansicolor.md +62 -0
- data/doc/add_ons_for_ruby/axlsx.md +60 -0
- data/doc/add_ons_for_ruby/bundler.md +20 -0
- data/doc/add_ons_for_ruby/byebug.md +14 -0
- data/doc/add_ons_for_ruby/camping.md +9 -0
- data/doc/add_ons_for_ruby/caxlsx.md +72 -0
- data/doc/add_ons_for_ruby/cgi.md +124 -0
- data/doc/add_ons_for_ruby/chunkypng.md +19 -0
- data/doc/add_ons_for_ruby/classifier.md +7 -0
- data/doc/add_ons_for_ruby/coderay.md +82 -0
- data/doc/add_ons_for_ruby/daemons.md +92 -0
- data/doc/add_ons_for_ruby/dl.md +114 -0
- data/doc/add_ons_for_ruby/erb.md +25 -0
- data/doc/add_ons_for_ruby/erubis.md +124 -0
- data/doc/add_ons_for_ruby/ferret.md +16 -0
- data/doc/add_ons_for_ruby/ffi.md +28 -0
- data/doc/add_ons_for_ruby/fox_and_fxruby.md +492 -0
- data/doc/add_ons_for_ruby/fpdf.md +389 -0
- data/doc/add_ons_for_ruby/fpm.md +46 -0
- data/doc/add_ons_for_ruby/ftp.md +70 -0
- data/doc/add_ons_for_ruby/fxruby.md +14 -0
- data/doc/add_ons_for_ruby/gist.md +30 -0
- data/doc/add_ons_for_ruby/glimmer-libui.md +43 -0
- data/doc/add_ons_for_ruby/gmail.md +22 -0
- data/doc/add_ons_for_ruby/gosu.md +12 -0
- data/doc/add_ons_for_ruby/graphviz.md +246 -0
- data/doc/add_ons_for_ruby/gruff.md +95 -0
- data/doc/add_ons_for_ruby/hexapdf.md +66 -0
- data/doc/add_ons_for_ruby/highline.md +16 -0
- data/doc/add_ons_for_ruby/iconv.md +20 -0
- data/doc/add_ons_for_ruby/id3lib.md +173 -0
- data/doc/add_ons_for_ruby/inline.md +30 -0
- data/doc/add_ons_for_ruby/inotify.md +130 -0
- data/doc/add_ons_for_ruby/instiki.md +38 -0
- data/doc/add_ons_for_ruby/jruby.md +253 -0
- data/doc/add_ons_for_ruby/json.md +64 -0
- data/doc/add_ons_for_ruby/kramdown.md +34 -0
- data/doc/add_ons_for_ruby/lexer.md +19 -0
- data/doc/add_ons_for_ruby/libarchive.md +91 -0
- data/doc/add_ons_for_ruby/libburn.md +29 -0
- data/doc/add_ons_for_ruby/mail.md +51 -0
- data/doc/add_ons_for_ruby/md5reverse.md +10 -0
- data/doc/add_ons_for_ruby/mechanize.md +195 -0
- data/doc/add_ons_for_ruby/memcache.md +22 -0
- data/doc/add_ons_for_ruby/midilib.md +35 -0
- data/doc/add_ons_for_ruby/mime.md +15 -0
- data/doc/add_ons_for_ruby/minitest.md +39 -0
- data/doc/add_ons_for_ruby/misc.md +3 -0
- data/doc/add_ons_for_ruby/mongrel.md +68 -0
- data/doc/add_ons_for_ruby/mp3info.md +121 -0
- data/doc/add_ons_for_ruby/mpd.md +16 -0
- data/doc/add_ons_for_ruby/mruby.md +13 -0
- data/doc/add_ons_for_ruby/nokogiri.md +32 -0
- data/doc/add_ons_for_ruby/opal.md +53 -0
- data/doc/add_ons_for_ruby/openid.md +10 -0
- data/doc/add_ons_for_ruby/padrino.md +4 -0
- data/doc/add_ons_for_ruby/passenger.md +4 -0
- data/doc/add_ons_for_ruby/prawn.md +269 -0
- data/doc/add_ons_for_ruby/pry.md +85 -0
- data/doc/add_ons_for_ruby/puma.md +29 -0
- data/doc/add_ons_for_ruby/qt_and_kde.md +793 -0
- data/doc/add_ons_for_ruby/rack.md +212 -0
- data/doc/add_ons_for_ruby/ragel.md +19 -0
- data/doc/add_ons_for_ruby/rails.md +97 -0
- data/doc/add_ons_for_ruby/ramaze.md +72 -0
- data/doc/add_ons_for_ruby/rbenv.md +13 -0
- data/doc/add_ons_for_ruby/redcarpet.md +6 -0
- data/doc/add_ons_for_ruby/redcloth.md +11 -0
- data/doc/add_ons_for_ruby/redmine.md +8 -0
- data/doc/add_ons_for_ruby/rmagick.md +555 -0
- data/doc/add_ons_for_ruby/roda.md +6 -0
- data/doc/add_ons_for_ruby/rspec.md +12 -0
- data/doc/add_ons_for_ruby/rtf.md +74 -0
- data/doc/add_ons_for_ruby/rubocop.md +84 -0
- data/doc/add_ons_for_ruby/ruby_users.md +23 -0
- data/doc/add_ons_for_ruby/rubygame.md +403 -0
- data/doc/add_ons_for_ruby/ruport.md +23 -0
- data/doc/add_ons_for_ruby/rvm.md +17 -0
- data/doc/add_ons_for_ruby/sdl.md +200 -0
- data/doc/add_ons_for_ruby/sequel.md +55 -0
- data/doc/add_ons_for_ruby/setup.md +92 -0
- data/doc/add_ons_for_ruby/shoes.md +7 -0
- data/doc/add_ons_for_ruby/sinatra_tutorial/sinatra_tutorial.cgi +7 -0
- data/doc/add_ons_for_ruby/sinatra_tutorial/sinatra_tutorial.rb +960 -0
- data/doc/add_ons_for_ruby/sinatra_tutorial/sinatra_tutorial.sinatra +56 -0
- data/doc/add_ons_for_ruby/slop.md +27 -0
- data/doc/add_ons_for_ruby/spreadsheet.md +153 -0
- data/doc/add_ons_for_ruby/sqlite.md +115 -0
- data/doc/add_ons_for_ruby/systemu.md +21 -0
- data/doc/add_ons_for_ruby/thor.md +16 -0
- data/doc/add_ons_for_ruby/tk.md +468 -0
- data/doc/add_ons_for_ruby/tty.md +9 -0
- data/doc/add_ons_for_ruby/tty_box.md +28 -0
- data/doc/add_ons_for_ruby/tty_prompt.md +25 -0
- data/doc/add_ons_for_ruby/vorbistagger.md +33 -0
- data/doc/add_ons_for_ruby/watir.md +30 -0
- data/doc/add_ons_for_ruby/webrick.md +399 -0
- data/doc/add_ons_for_ruby/whois.md +52 -0
- data/doc/add_ons_for_ruby/windows.md +346 -0
- data/doc/add_ons_for_ruby/writeexcel.md +67 -0
- data/doc/add_ons_for_ruby/wxwidgets.md +3 -0
- data/doc/add_ons_for_ruby/xml.md +198 -0
- data/doc/add_ons_for_ruby/xosd.md +21 -0
- data/doc/add_ons_for_ruby/yard.md +39 -0
- data/doc/add_ons_for_ruby/zip.md +67 -0
- data/doc/core/abbrev.md +31 -0
- data/doc/core/argf.md +26 -0
- data/doc/core/argv.md +102 -0
- data/doc/core/array.md +1142 -0
- data/doc/core/base64.md +7 -0
- data/doc/core/basic_object.md +24 -0
- data/doc/core/benchmarks_and_profiling.md +87 -0
- data/doc/core/bigdecimal.md +13 -0
- data/doc/core/binding.md +33 -0
- data/doc/core/blocks.md +45 -0
- data/doc/core/class.md +43 -0
- data/doc/core/closure.md +207 -0
- data/doc/core/commandline.md +9 -0
- data/doc/core/comparable.md +9 -0
- data/doc/core/compiling_ruby_c_code.md +1969 -0
- data/doc/core/conditional_requires.md +13 -0
- data/doc/core/constants.md +87 -0
- data/doc/core/csv.md +55 -0
- data/doc/core/dir.md +102 -0
- data/doc/core/drb.md +121 -0
- data/doc/core/encoding.md +158 -0
- data/doc/core/enumerable.md +160 -0
- data/doc/core/enumerator.md +38 -0
- data/doc/core/env.md +12 -0
- data/doc/core/errno.md +24 -0
- data/doc/core/error_codes_in_ruby.md +19 -0
- data/doc/core/etc.md +95 -0
- data/doc/core/eval.md +20 -0
- data/doc/core/exceptions_and_errors.md +247 -0
- data/doc/core/fiber.md +23 -0
- data/doc/core/fiddle.md +20 -0
- data/doc/core/file.md +388 -0
- data/doc/core/fileutils.md +74 -0
- data/doc/core/float.md +33 -0
- data/doc/core/garbage_collection_in_ruby.md +75 -0
- data/doc/core/gem_and_gemspec.md +447 -0
- data/doc/core/getoptlang.md +19 -0
- data/doc/core/handling_networks.md +63 -0
- data/doc/core/hash.md +485 -0
- data/doc/core/hooks.md +47 -0
- data/doc/core/imap.md +7 -0
- data/doc/core/integer.md +106 -0
- data/doc/core/io.md +126 -0
- data/doc/core/io_console.md +31 -0
- data/doc/core/irb.md +180 -0
- data/doc/core/iterators.md +194 -0
- data/doc/core/kernel.md +227 -0
- data/doc/core/keyword_arguments.md +10 -0
- data/doc/core/loops.md +24 -0
- data/doc/core/marshal.md +123 -0
- data/doc/core/math.md +452 -0
- data/doc/core/matrix.md +16 -0
- data/doc/core/mechanize.md +3 -0
- data/doc/core/methods.md +221 -0
- data/doc/core/misc.md +1779 -0
- data/doc/core/mkmf.md +164 -0
- data/doc/core/module.md +76 -0
- data/doc/core/mutex.md +63 -0
- data/doc/core/nil.md +14 -0
- data/doc/core/object.md +238 -0
- data/doc/core/objectspace.md +28 -0
- data/doc/core/open3.md +24 -0
- data/doc/core/open_uri.md +29 -0
- data/doc/core/openssl.md +45 -0
- data/doc/core/openstruct.md +67 -0
- data/doc/core/optparser.md +234 -0
- data/doc/core/pathname.md +49 -0
- data/doc/core/performance_considerations_in_ruby.md +31 -0
- data/doc/core/pp.md +39 -0
- data/doc/core/precedence.md +27 -0
- data/doc/core/prime.md +13 -0
- data/doc/core/proc.md +131 -0
- data/doc/core/process.md +303 -0
- data/doc/core/pstore.md +23 -0
- data/doc/core/psych.md +7 -0
- data/doc/core/pty.md +11 -0
- data/doc/core/ractor.md +12 -0
- data/doc/core/rake.md +130 -0
- data/doc/core/random.md +17 -0
- data/doc/core/range.md +25 -0
- data/doc/core/rational.md +7 -0
- data/doc/core/rbconfig.md +39 -0
- data/doc/core/rdoc.md +67 -0
- data/doc/core/readline.md +306 -0
- data/doc/core/refinements.md +23 -0
- data/doc/core/regex.md +663 -0
- data/doc/core/reline.md +76 -0
- data/doc/core/ripper.md +57 -0
- data/doc/core/ruby_and_c.md +8 -0
- data/doc/core/rubyvm.md +28 -0
- data/doc/core/set.md +26 -0
- data/doc/core/shellwords.md +34 -0
- data/doc/core/signals.md +32 -0
- data/doc/core/singleton.md +47 -0
- data/doc/core/sockets.md +137 -0
- data/doc/core/splat.md +10 -0
- data/doc/core/stderr.md +3 -0
- data/doc/core/stdin.md +27 -0
- data/doc/core/stdout.md +14 -0
- data/doc/core/string.md +854 -0
- data/doc/core/stringio.md +54 -0
- data/doc/core/stringscanner.md +43 -0
- data/doc/core/struct.md +52 -0
- data/doc/core/subclassing.md +41 -0
- data/doc/core/symbols.md +47 -0
- data/doc/core/system.md +3 -0
- data/doc/core/tcpsocket.md +14 -0
- data/doc/core/telnet.md +35 -0
- data/doc/core/tempfile.md +34 -0
- data/doc/core/threads.md +127 -0
- data/doc/core/time.md +335 -0
- data/doc/core/tracepoint.md +7 -0
- data/doc/core/unicode.md +5 -0
- data/doc/core/unittest.md +8 -0
- data/doc/core/unprintable_characters.md +17 -0
- data/doc/core/uri.md +14 -0
- data/doc/core/xml.md +13 -0
- data/doc/core/yaml.md +376 -0
- data/doc/core/zlib.md +111 -0
- data/doc/deprecations/deprecations.md +60 -0
- data/doc/documentation_viewer.cgi +87 -0
- data/doc/linux_may_have_issues/linux_may_have_issues.md +92 -0
- data/doc/misc/how_to_publish.md +49 -0
- data/doc/misc/links.md +19 -0
- data/doc/misc/the_initialize_method.md +2 -0
- data/doc/misc/the_perfect_book.md +14 -0
- data/doc/roebeshell/CONFIGURATION_FOR_THE_ROEBE_SHELL.md +381 -0
- data/doc/roebeshell/MANIFESTO_FOR_THE_ROEBE_SHELL_COMPONENT.md +391 -0
- data/doc/roebeshell/PHILOSOPHY_OF_THE_ROEBE_SHELL.md +64 -0
- data/doc/ruby_on_rails_tutorial/data_types_for_rails_migrations.md +11 -0
- data/doc/ruby_on_rails_tutorial/ruby_on_rails_tutorial.cgi +404 -0
- data/doc/statistics/statistics.md +94 -0
- data/doc/the_ruby_philosophy/the_ruby_philosophy.md +209 -0
- data/doc/todo/todo_for_the_roebe_project_on_windows.md +4 -0
- data/doc/todo/todo_for_the_roebe_shell.md +741 -0
- data/examples/README.md +4 -0
- data/examples/date_and_time/is_this_day_part_of_that_range.rb +45 -0
- data/examples/gui/fxruby/hello_world.rb +11 -0
- data/examples/gui/fxruby/text_editor.rb +51 -0
- data/examples/misc/argv_encoding_test.rb +38 -0
- data/examples/misc/arrays/center_two_arrays.rb +24 -0
- data/examples/misc/forking_example/forking_example.rb +28 -0
- data/examples/misc/loops/display_coloured_vertical_bars.rb +10 -0
- data/examples/rack/README.md +2 -0
- data/examples/rack/all_in_one_rack_example.rb +241 -0
- data/examples/rack/hello_world_in_rack.rb +44 -0
- data/examples/recursion/README.md +2 -0
- data/examples/recursion/quadratic_sum_of_a_number.rb +23 -0
- data/examples/recursion/reverse_the_string.rb +31 -0
- data/examples/recursion/shift_highest_value.rb +30 -0
- data/examples/recursion/shuffle_sort_string.rb +35 -0
- data/examples/reline/multiline_editing.rb +21 -0
- data/examples/reline/simple_example.rb +39 -0
- data/examples/rmagick/001_axes.rb +68 -0
- data/examples/rmagick/002_basic_2D_canvas.rb +29 -0
- data/examples/rmagick/003_a_walking_duck.rb +42 -0
- data/examples/rmagick/004_black_rectangle_with_red_border.rb +37 -0
- data/examples/rmagick/A_WALKING_DUCK.gif +0 -0
- data/examples/rmagick/foobar.png +0 -0
- data/examples/tty_box/all_in_one.rb +33 -0
- data/lib/roebe/autoinclude.rb +4 -0
- data/lib/roebe/autoinclude_encoding.rb +11 -0
- data/lib/roebe/autoinclude_open.rb +3 -0
- data/lib/roebe/base/base.rb +29 -0
- data/lib/roebe/base/chdir.rb +48 -0
- data/lib/roebe/base/colours.rb +671 -0
- data/lib/roebe/base/commandline_arguments.rb +109 -0
- data/lib/roebe/base/constants.rb +25 -0
- data/lib/roebe/base/copy.rb +72 -0
- data/lib/roebe/base/editor.rb +18 -0
- data/lib/roebe/base/encoding.rb +54 -0
- data/lib/roebe/base/env.rb +22 -0
- data/lib/roebe/base/esystem.rb +141 -0
- data/lib/roebe/base/home_directory_of_user_x.rb +27 -0
- data/lib/roebe/base/is_on_roebe.rb +22 -0
- data/lib/roebe/base/misc.rb +502 -0
- data/lib/roebe/base/next.rb +29 -0
- data/lib/roebe/base/opnn.rb +63 -0
- data/lib/roebe/base/prototype.rb +523 -0
- data/lib/roebe/base/reset.rb +53 -0
- data/lib/roebe/base/run.rb +17 -0
- data/lib/roebe/base/simp.rb +25 -0
- data/lib/roebe/base/support_for_beautiful_url.rb +35 -0
- data/lib/roebe/base/symlink.rb +52 -0
- data/lib/roebe/base/time.rb +175 -0
- data/lib/roebe/base/verbose_truth.rb +22 -0
- data/lib/roebe/base/write_what_into.rb +33 -0
- data/lib/roebe/browser/README.md +5 -0
- data/lib/roebe/browser/browser.rb +26 -0
- data/lib/roebe/browser/constants.rb +43 -0
- data/lib/roebe/browser/firefox.rb +47 -0
- data/lib/roebe/browser/menu.rb +103 -0
- data/lib/roebe/browser/misc.rb +367 -0
- data/lib/roebe/browser/output_url_then_open_in_browser.rb +175 -0
- data/lib/roebe/browser/palemoon.rb +59 -0
- data/lib/roebe/browser/reset.rb +47 -0
- data/lib/roebe/cat/class.rb +226 -0
- data/lib/roebe/cat/method.rb +14 -0
- data/lib/roebe/classes/add_irc_quote.rb +132 -0
- data/lib/roebe/classes/add_newline_after.rb +124 -0
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- data/lib/roebe/www/udev/udev.sinatra +56 -0
- data/lib/roebe/www/unicode/unicode.cgi +28 -0
- data/lib/roebe/www/unionfs/unionfs.cgi +8 -0
- data/lib/roebe/www/unionfs/unionfs.rb +325 -0
- data/lib/roebe/www/unionfs/unionfs.sinatra +56 -0
- data/lib/roebe/www/usb/usb.cgi +7 -0
- data/lib/roebe/www/usb/usb.rb +807 -0
- data/lib/roebe/www/usb/usb.sinatra +52 -0
- data/lib/roebe/www/vaccines/vaccines.cgi +70 -0
- data/lib/roebe/www/vectors/vectors.cgi +7 -0
- data/lib/roebe/www/vectors/vectors.rb +90 -0
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- data/lib/roebe/www/video/video.rb +7723 -0
- data/lib/roebe/www/video/video.sinatra +52 -0
- data/lib/roebe/www/view_via_pre_tag/README.md +2 -0
- data/lib/roebe/www/view_via_pre_tag/view_via_pre_tag.cgi +26 -0
- data/lib/roebe/www/vim/aliases/vim_aliases.yml +487 -0
- data/lib/roebe/www/vim/autocmds/vim_autocmds +50 -0
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- data/lib/roebe/www/vim/colours/golden.vim +72 -0
- data/lib/roebe/www/vim/colours/sienna.vim +47 -0
- data/lib/roebe/www/vim/colours/softblue.vim +45 -0
- data/lib/roebe/www/vim/colours/zenburn.vim +135 -0
- data/lib/roebe/www/vim/functions/functions +185 -0
- data/lib/roebe/www/vim/mappings/mappings.md +372 -0
- data/lib/roebe/www/vim/matrix/matrix.vim +316 -0
- data/lib/roebe/www/vim/tetris/tetris.vim +331 -0
- data/lib/roebe/www/vim/vim.cgi +7 -0
- data/lib/roebe/www/vim/vim.rb +856 -0
- data/lib/roebe/www/vim/vim.sinatra +52 -0
- data/lib/roebe/www/vim/vimrc/vimrc +332 -0
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- data/lib/roebe/www/virology/virology.rb +603 -0
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- data/lib/roebe/www/virtual_reality/virtual_reality.rb +184 -0
- data/lib/roebe/www/virtual_reality/virtual_reality.sinatra +52 -0
- data/lib/roebe/www/visual_studio/visual_studio.cgi +7 -0
- data/lib/roebe/www/visual_studio/visual_studio.rb +38 -0
- data/lib/roebe/www/visual_studio/visual_studio.sinatra +56 -0
- data/lib/roebe/www/visualization/content.md +2 -0
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- data/lib/roebe/www/vitamines/vitamines.rb +138 -0
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- data/lib/roebe/www/vlc/vlc.cgi +32 -0
- data/lib/roebe/www/vnc/vnc.cgi +7 -0
- data/lib/roebe/www/vnc/vnc.rb +28 -0
- data/lib/roebe/www/vnc/vnc.sinatra +56 -0
- data/lib/roebe/www/voice_recorders/voice_recorders.cgi +7 -0
- data/lib/roebe/www/voice_recorders/voice_recorders.rb +48 -0
- data/lib/roebe/www/voice_recorders/voice_recorders.sinatra +52 -0
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- data/lib/roebe/www/wahrscheinlichkeit/wahrscheinlichkeit.cgi +7 -0
- data/lib/roebe/www/wahrscheinlichkeit/wahrscheinlichkeit.rb +270 -0
- data/lib/roebe/www/wahrscheinlichkeit/wahrscheinlichkeit.sinatra +56 -0
- data/lib/roebe/www/war_in_Ukraine_2022/war_in_Ukraine_2022.cgi +7 -0
- data/lib/roebe/www/war_in_Ukraine_2022/war_in_Ukraine_2022.rb +251 -0
- data/lib/roebe/www/war_in_Ukraine_2022/war_in_Ukraine_2022.sinatra +56 -0
- data/lib/roebe/www/waschmaschinen/waschmaschinen.cgi +7 -0
- data/lib/roebe/www/waschmaschinen/waschmaschinen.rb +168 -0
- data/lib/roebe/www/waschmaschinen/waschmaschinen.sinatra +52 -0
- data/lib/roebe/www/wayland/wayland.cgi +25 -0
- data/lib/roebe/www/webserving/webserving.cgi +7 -0
- data/lib/roebe/www/webserving/webserving.rb +905 -0
- data/lib/roebe/www/webserving/webserving.sinatra +52 -0
- data/lib/roebe/www/weechat/weechat.cgi +7 -0
- data/lib/roebe/www/weechat/weechat.rb +166 -0
- data/lib/roebe/www/weechat/weechat.sinatra +52 -0
- data/lib/roebe/www/wein/wein.cgi +7 -0
- data/lib/roebe/www/wein/wein.rb +41 -0
- data/lib/roebe/www/wein/wein.sinatra +56 -0
- data/lib/roebe/www/wget/wgetrc +124 -0
- data/lib/roebe/www/why_linux/why_linux.cgi +7 -0
- data/lib/roebe/www/why_linux/why_linux.rb +317 -0
- data/lib/roebe/www/why_linux/why_linux.sinatra +56 -0
- data/lib/roebe/www/wikis/wikis.cgi +7 -0
- data/lib/roebe/www/wikis/wikis.rb +18 -0
- data/lib/roebe/www/wikis/wikis.sinatra +56 -0
- data/lib/roebe/www/wine/wine.cgi +7 -0
- data/lib/roebe/www/wine/wine.rb +323 -0
- data/lib/roebe/www/wine/wine.sinatra +52 -0
- data/lib/roebe/www/wine/wine_config +69 -0
- data/lib/roebe/www/wings3d/data/House_Villa.wings +0 -0
- data/lib/roebe/www/wings3d/wings3d.cgi +7 -0
- data/lib/roebe/www/wings3d/wings3d.rb +64 -0
- data/lib/roebe/www/wings3d/wings3d.sinatra +56 -0
- data/lib/roebe/www/witze/witze.cgi +9 -0
- data/lib/roebe/www/witze/witze.rb +1054 -0
- data/lib/roebe/www/witze/witze.sinatra +56 -0
- data/lib/roebe/www/wlan/wlan.cgi +9 -0
- data/lib/roebe/www/wlan/wlan.rb +778 -0
- data/lib/roebe/www/wlan/wlan.sinatra +56 -0
- data/lib/roebe/www/wlan/wpa_supplicant.conf +57 -0
- data/lib/roebe/www/working_from_home/working_from_home.md +60 -0
- data/lib/roebe/www/world_health_organization/world_health_organization.cgi +7 -0
- data/lib/roebe/www/world_health_organization/world_health_organization.rb +68 -0
- data/lib/roebe/www/world_health_organization/world_health_organization.sinatra +56 -0
- data/lib/roebe/www/xampp/xampp.cgi +7 -0
- data/lib/roebe/www/xampp/xampp.rb +126 -0
- data/lib/roebe/www/xampp/xampp.sinatra +56 -0
- data/lib/roebe/www/xchat/xchat.cgi +7 -0
- data/lib/roebe/www/xchat/xchat.rb +146 -0
- data/lib/roebe/www/xchat/xchat.sinatra +56 -0
- data/lib/roebe/www/xfce/xfce.cgi +31 -0
- data/lib/roebe/www/xmas/xmas.cgi +7 -0
- data/lib/roebe/www/xmas/xmas.rb +521 -0
- data/lib/roebe/www/xmas/xmas.sinatra +56 -0
- data/lib/roebe/www/xorg/xorg.cgi +9 -0
- data/lib/roebe/www/xorg/xorg.rb +2912 -0
- data/lib/roebe/www/xorg/xorg.sinatra +56 -0
- data/lib/roebe/www/xournalpp/content.md +12 -0
- data/lib/roebe/www/yeast/yeast.cgi +7 -0
- data/lib/roebe/www/yeast/yeast.rb +147 -0
- data/lib/roebe/www/yeast/yeast.sinatra +56 -0
- data/lib/roebe/www/zenity/zenity.cgi +7 -0
- data/lib/roebe/www/zenity/zenity.rb +208 -0
- data/lib/roebe/www/zenity/zenity.sinatra +56 -0
- data/lib/roebe/www/zitieren/example.md +10 -0
- data/lib/roebe/www/zitieren/wie_zitiert_man_in_der_Wissenschaft_richtig.md +261 -0
- data/lib/roebe/www/zoologie/zoologie.cgi +7 -0
- data/lib/roebe/www/zoologie/zoologie.gtk +150 -0
- data/lib/roebe/www/zoologie/zoologie.rb +280 -0
- data/lib/roebe/www/zoologie/zoologie.sinatra +56 -0
- data/lib/roebe/www/zoom/zoom.cgi +7 -0
- data/lib/roebe/www/zoom/zoom.rb +55 -0
- data/lib/roebe/www/zoom/zoom.sinatra +56 -0
- data/lib/roebe/www/zsh/zshrc +360 -0
- data/lib/roebe/xml/catalog +29 -0
- data/lib/roebe/yaml/advertisement_servers/advertisement_servers.yml +18 -0
- data/lib/roebe/yaml/autogenerate_these_rewrite_rules/autogenerate_these_rewrite_rules.yml +131 -0
- data/lib/roebe/yaml/autostart_these_programs.yml +22 -0
- data/lib/roebe/yaml/bezirke_in_wien/bezirke_in_wien.yml +29 -0
- data/lib/roebe/yaml/binary_to_hexadecimal/binary_to_hexadecimal.csv +17 -0
- data/lib/roebe/yaml/bin/303/244re_einheiten/bin/303/244re_einheiten.yml +9 -0
- data/lib/roebe/yaml/books/favourite_books.yml +15 -0
- data/lib/roebe/yaml/boot_settings/boot_settings.yml +53 -0
- data/lib/roebe/yaml/browser.yml +1 -0
- data/lib/roebe/yaml/compile/compile.yml +262 -0
- data/lib/roebe/yaml/current_ruby_versions.yml +12 -0
- data/lib/roebe/yaml/directory_structure.yml +121 -0
- data/lib/roebe/yaml/display_settings/display_settings.yml +184 -0
- data/lib/roebe/yaml/e_kennzeichnungen/e_kennzeichnungen.yml +101 -0
- data/lib/roebe/yaml/english_letter_frequency/english_letter_frequency.yml +30 -0
- data/lib/roebe/yaml/error_codes/error_codes.yml +342 -0
- data/lib/roebe/yaml/escape_codes/escape_codes.yml +12 -0
- data/lib/roebe/yaml/examples/README.md +4 -0
- data/lib/roebe/yaml/examples/c_headers_creator.yml +10 -0
- data/lib/roebe/yaml/examples/constant.yml +4 -0
- data/lib/roebe/yaml/examples/fixnum.yml +1 -0
- data/lib/roebe/yaml/examples/hash_example.yml +42 -0
- data/lib/roebe/yaml/examples/ruby_keywords.yml +43 -0
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- data/lib/roebe/yaml/examples/test.yml +9 -0
- data/lib/roebe/yaml/examples/tree.yml +8 -0
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- data/lib/roebe/yaml/file_information.yml +34 -0
- data/lib/roebe/yaml/fonts/fonts.yml +33 -0
- data/lib/roebe/yaml/forbidden_IPs/forbidden_IPs.yml +2 -0
- data/lib/roebe/yaml/fstab/fstab.yml +122 -0
- data/lib/roebe/yaml/funstuff/am/303/274sante_deutsche_w/303/266rter.yml +2 -0
- data/lib/roebe/yaml/gnome/gnome.yml +8 -0
- data/lib/roebe/yaml/holidays/holidays.yml +24 -0
- data/lib/roebe/yaml/http_status_codes/http_status_codes.yml +52 -0
- data/lib/roebe/yaml/individual_environment_variables/cflags.yml +59 -0
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- data/lib/roebe/yaml/individual_environment_variables/ldflags.yml +2 -0
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- data/lib/roebe/yaml/ip_suffix/ip_suffix.yml +22 -0
- data/lib/roebe/yaml/irc/irc.yml +11 -0
- data/lib/roebe/yaml/kde/kde.yml +54 -0
- data/lib/roebe/yaml/kernel/kernel.yml +11 -0
- data/lib/roebe/yaml/kernel_config/kernel_config.yml +79 -0
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- data/lib/roebe/yaml/ls_colors.yml +17 -0
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- data/lib/roebe/yaml/main_jpg.yml +1 -0
- data/lib/roebe/yaml/main_pdf.yml +1 -0
- data/lib/roebe/yaml/main_png.yml +1 -0
- data/lib/roebe/yaml/mark_this_directory.yml +1 -0
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- data/lib/roebe/yaml/monitors/monitors.yml +127 -0
- data/lib/roebe/yaml/n_people_in_these_countries.yml +31 -0
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- metadata +3031 -0
@@ -0,0 +1,1447 @@
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require 'roebe/knowledge_base/knowledge_base.rb'
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english('Genetics') {
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autoextend
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default_template '
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a, a:link { text-decoration: none; color: steelblue; font-weight: bold; }
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a:hover { text-decoration: underline; color: royalblue; font-weight: bold; }
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p.default {
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margin: 4px;
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margin-left: 0.5em;
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margin-right: 0.5em;
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padding: 5px;
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}
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div.default {
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margin: 0px;
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padding: 0px;
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}
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'
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ruby_favicon
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body_css_class 's4px padt2px marpad2px VERDANAs'
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body_css_style 'background-color: #d3d2d1;'
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default_font_size_and_hyperlinks
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pull_in Roebe::KnowledgeBase
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doc_smaller_width('s0_8em') {
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dimg2 'science/genetics/DNA_HELIX_UND_RATTE.png',
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'https://i.imgur.com/tHpLvvL.jpg',
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'round_black4 mars0_5em'
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br
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# ========================================================================= #
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# === Tabelle der Nukleoside
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# ========================================================================= #
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fancy2 'Tabelle der Nukleoside'
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br
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table2('mars2em larger BOLD','','',
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'Basen:','Nukleoside:',
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'Adenin ←','→ Adenosin',
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'Guanin ←','→ Guanosin',
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'Thymin ←','→ Thymidin',
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'Cytosin ←','→ Cytidin',
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'Uracil ←','→ Uridin'
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)
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pretty_hsep
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header 'Sigma-Faktoren','mart1px marb10px'
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br
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p_default_le {
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e 'Sigma 32 bei E.coli erkennt eine andere Sequenz als (Standard)
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Sigma 70. Ich tausche einen Teil der Polymerase aus - und schon
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funktioniert sie komplett anders!'
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}
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pretty_hsep
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# ========================================================================= #
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# === Nomenklatur von Genen
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# ========================================================================= #
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header 'Nomenklatur der Gene'
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div('default martb1px') {
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p('marb1px') {
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e 'Die verschiedenen <b>Namen</b> für Gene entstammen oft der
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Geschichte ihrer Entdeckung - sprich, wann, wie und von welcher
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Person oder von welchen Personen sie entdeckt wurden:'
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br
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lem2 '- Ein Zellbiologie gibt den Namen anhand der zellulären Funktion.'
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br
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lem2 '- Ein Entwicklungsbiologe anhand von Mutanten die defekt sind.'
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}
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}
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# ========================================================================= #
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# === ESTs
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# ========================================================================= #
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fancy2 'ESTs'
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div_default_le {
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p_default_le {
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e '<b>ESTs</b> (aka <b>expressed sequence tags</b> are short sequences
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derived from messenger RNAs. These can, in turn, be hybridized to
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chromosomal DNA. The advantage of this was that this allowed
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scientists in the 1990s to easily identify open reading frames.'
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}
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}
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# ========================================================================= #
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# === Historische Fakten tag
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# ========================================================================= #
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+
header 'Historische und kuriose Fakten'
|
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+
div_default_le {
|
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|
+
p_default_le {
|
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|
+
e 'Im Jahre <b>1970</b> sequenzierte <b>Ray Wu</b> als erster ein DNA
|
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+
Fragment - zwölf Basen am Ende eines Einzelstrangs entstanden aus
|
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+
einem durch Enzyme geschnittenen Ring.'
|
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+
}
|
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+
}
|
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+
# ========================================================================= #
|
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|
+
# === DNA Microarrays tag
|
96
|
+
# ========================================================================= #
|
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+
header 'DNA Microarrays','mart1px'
|
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|
+
div('default ind0 wid95 mart2px','dna_microarrays'){
|
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+
e '<b>DNA Microarrays</b> make it possible to create a global profile
|
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+
of all expressed RNA within a cell or cell homogenisate.'
|
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+
br
|
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+
e 'This pattern that will be capture is often very characteristic
|
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|
+
of the given cell or tissue, which in turn allows characterization
|
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+
of disease patterns (in theory).'
|
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+
br
|
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|
+
dimg 'science/DNA_MICROARRAY.png',
|
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+
'mars3em'
|
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+
}
|
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+
# ========================================================================= #
|
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+
# === MITOCHONDRIUM
|
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|
+
# ========================================================================= #
|
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|
+
div(id: 'mitochondrium'){
|
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|
+
h4 'Mitochondrium'
|
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|
+
dimg 'science/biology/organelles/MITOCHONDRIUM_OVERVIEW.png',
|
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|
+
'round_black3 marl1em'
|
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|
+
dimg 'science/biology/organelles/TEM_Bild_eines_Mitochondriums.png',
|
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|
+
'round_black3'
|
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+
}
|
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+
# ========================================================================= #
|
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|
+
# === Thymidylat-Synthase Tag. dUMP -> dTMP
|
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|
+
# ========================================================================= #
|
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|
+
div_default_le {
|
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|
+
header 'Thymidylat-Synthase'
|
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+
p_default_le {
|
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+
e 'dUMP wird durch <b>Thymidylat-Synthase</b> in dTMP umgewandelt,
|
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+
indem eine Methylgruppe angeheftet wird.'
|
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+
}
|
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+
}
|
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|
+
# =========================================================================== #
|
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|
+
# === misc tag tidbits tag
|
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|
+
# =========================================================================== #
|
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|
+
div_default_le {
|
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|
+
e 'Helikasen wurden im Jahre 1976 durch <b>Hoffman-Berling</b> entdeckt.'
|
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+
br
|
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|
+
e 'SSB ist auch insofern wichtig, da es <b>secondary structures</b>
|
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|
+
reduziert.'
|
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|
+
br
|
138
|
+
e '<b>RecA</b> wird durch ATP "angeregt", die Affinität zu DNA
|
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|
+
steigt.'
|
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|
+
br
|
141
|
+
e 'Die <b>Shine-Dalgarno Sequenz</b> auf der mRNA ist AGG-AGG-U'
|
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|
+
br
|
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|
+
e 'Wo natürlicherweise Kalkstein auftritt, ist der Boden weniger sauer.'
|
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|
+
}
|
145
|
+
# ========================================================================= #
|
146
|
+
# === Denaturing DNA
|
147
|
+
# ========================================================================= #
|
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|
+
header 'Denaturing DNA'
|
149
|
+
div('ind0 wid95 mart2px'){
|
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|
+
e 'DNA will become fully denatured at a pH of <b>11.3</b>.'
|
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|
+
}
|
152
|
+
# ========================================================================= #
|
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|
+
# === Gene Map Viewer
|
154
|
+
# ========================================================================= #
|
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|
+
header 'Gene Map Viewers (Ensembl and others)'
|
156
|
+
div('ind0 wid95 mart2px'){
|
157
|
+
e 'The Ensemble Gene Map Viewer contains entries for humans,
|
158
|
+
chicken, fugu, fruitfly and many other organisms.'
|
159
|
+
br
|
160
|
+
abr 'https://www.ensembl.org/index.html',
|
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|
+
content: 'Ensembl Gene Map Viewer - Show different Animals '\
|
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|
+
'and Human Genomes',
|
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|
+
css_class: 'BOLD mars1em'
|
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|
+
br
|
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|
+
e 'The above Ensembl Application has been written in perl.'
|
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|
+
br
|
167
|
+
e 'Especially these reviews may be helpful for anyone curious
|
168
|
+
to find out more about it:'
|
169
|
+
br
|
170
|
+
e 'James Stalker et al. The Ensembl Web Site: Mechanics of
|
171
|
+
a Genome Browser Genome Res. 2004 14: 951-955.'
|
172
|
+
br
|
173
|
+
e 'It can be found here:'
|
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|
+
br
|
175
|
+
abr 'https://www.genome.org/cgi/content/abstract/14/5/951',
|
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|
+
content: 'Review of the GeneMap Viewer',
|
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|
+
css_class: 'BOLD mars1em'
|
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|
+
abr 'https://www.ensembl.org/Docs/',
|
179
|
+
content: 'Good Documents for Ensembl',
|
180
|
+
css_class: 'BOLD mars1em'
|
181
|
+
}
|
182
|
+
# ========================================================================= #
|
183
|
+
# === The codon sun
|
184
|
+
# ========================================================================= #
|
185
|
+
# http://localhost/programming/ruby/src/roebe/lib/roebe/www/genetics/genetics.cgi#the_codon_sun
|
186
|
+
# ========================================================================= #
|
187
|
+
header 'The codon sun'
|
188
|
+
div_default_le {
|
189
|
+
dimg2 'science/molecular_biology/THE_CODON_SUN.jpg',
|
190
|
+
'https://i.imgur.com/VvgDNGl.jpg',
|
191
|
+
'mar1em mars3em round_black3'
|
192
|
+
}
|
193
|
+
# ========================================================================= #
|
194
|
+
# === Die Terminale Transferase
|
195
|
+
# ========================================================================= #
|
196
|
+
header 'Die Terminale Transferase'
|
197
|
+
div_default_le {
|
198
|
+
lembre '<b>Terminale Tranferase</b> katalysiert die Addition von
|
199
|
+
Nukleotiden an das <b>3-Strich Ende von DNA</b>.'
|
200
|
+
br
|
201
|
+
lembre "Interessanterweise arbeitet dieses Enzym an <b>ssDNA</b> und
|
202
|
+
benötigt keinen Primer. Es scheint auch Ribonucleotide an die 3'
|
203
|
+
Enden von DNA hinzufügen zu können."
|
204
|
+
br
|
205
|
+
lembre '<b>Cobalt</b> ist ein Kofaktor dieses Enzyms.'
|
206
|
+
}
|
207
|
+
# ========================================================================= #
|
208
|
+
# === Cosuppression tag (ist NICHT Codominance!)
|
209
|
+
# ========================================================================= #
|
210
|
+
header 'Cosuppression'
|
211
|
+
div_default_le {
|
212
|
+
e '<b>Cosuppression</b> ist dann zu beobachten wenn sowohl das
|
213
|
+
<b>Transgen</b>, als auch das <b>homologe endogeneous Gene
|
214
|
+
gesilenced</b> werden.'
|
215
|
+
br
|
216
|
+
e 'Der Effekt wird durch <b>dsRNA</b> hervorgerufen.'
|
217
|
+
br
|
218
|
+
e 'Es wurde zuerst in Pflanzen, dann in Pilzen und auch in Tieren
|
219
|
+
beobachtet - vor allem die Cosuppression in Petunias wurde bekannt:'
|
220
|
+
br
|
221
|
+
dimg 'science/biology/PLANTS/COSUPPRESSION_IN_PETUNIAS.gif',
|
222
|
+
'bblack3 marl2em'
|
223
|
+
br
|
224
|
+
e 'Picture above: A variegated petunia. Upon injection of the
|
225
|
+
gene responsible for purple colouring in petunias, the flowers
|
226
|
+
became variegated or white rather than deeper purple as was
|
227
|
+
expected.','italic marl2em smaller'
|
228
|
+
br
|
229
|
+
e 'Cosuppression führt effektiv zur <b>Degradierung von RNA</b>.'
|
230
|
+
br
|
231
|
+
e 'Dies kann man dann auch "grafting-induced" Cosuppression nennen,
|
232
|
+
vor allem in Pflanzen.'
|
233
|
+
br
|
234
|
+
ee 'Man vermutet das dieser Mechanismus in eukaryotischen Organismen
|
235
|
+
dadurch entstand um molekulare Parasiten wie Viren oder Transpososon
|
236
|
+
zu "bekämpfen" (Kasschau, K.D. & Carrington, J.C. Cell 95, 461-470 (1998). '
|
237
|
+
selfy 'https://www.ncbi.nlm.nih.gov/pubmed/9827799?dopt=Abstract&holding=npg)'
|
238
|
+
br
|
239
|
+
e 'Diese Vermutung wird unterstützt von der Tatsache das einige
|
240
|
+
Pflanzen RNA-Viren <b>Cosuppression inhibieren</b> können.'
|
241
|
+
br
|
242
|
+
abr 'https://www.nature.com/ng/journal/v21/n2/full/ng0299_148.html',
|
243
|
+
content: 'Cosuppression',
|
244
|
+
css_class: 'BOLD mars1em'
|
245
|
+
br
|
246
|
+
}
|
247
|
+
# ========================================================================= #
|
248
|
+
# === IMG TAG
|
249
|
+
# ========================================================================= #
|
250
|
+
div(id: 'codon') {
|
251
|
+
dimg 'science/biology/RNA_BASE_CODE.png',
|
252
|
+
'bblack4 mars1em'
|
253
|
+
}
|
254
|
+
# ========================================================================= #
|
255
|
+
# === Methylcytosin und Methyl.
|
256
|
+
# ========================================================================= #
|
257
|
+
div('mart1em','methylcytosin') {
|
258
|
+
p_default_le {
|
259
|
+
e 'In eukaryotischer DNA liegen methylierte Cytosine immer neben
|
260
|
+
Guaninen desselben Stranges. (<b>CpG</b> Inseln, wobei p für
|
261
|
+
<b>Phosphodiesterbrücke</b> steht)'
|
262
|
+
br
|
263
|
+
e 'Häufig kann man in Bakterien methylierte Adenin-Rest finden -
|
264
|
+
<b>6-Methylaminopurin</b>.'
|
265
|
+
}
|
266
|
+
}
|
267
|
+
# ========================================================================= #
|
268
|
+
# === Meiose tag
|
269
|
+
# ========================================================================= #
|
270
|
+
header 'Meiose (griechisch: <b>meiono</b> = vermindern)'
|
271
|
+
div_default_le {
|
272
|
+
p_default_le {
|
273
|
+
e 'Die <b>Prophase I</b> der Meiose ist unterteilt in: (LeZyPaDip-Dia)'
|
274
|
+
br
|
275
|
+
cmd ' Leptotän'
|
276
|
+
cmd ' Zygotän'
|
277
|
+
cmd ' Pachytän'
|
278
|
+
cmd ' Diplotän'
|
279
|
+
cmd ' Diakinese'
|
280
|
+
}
|
281
|
+
}
|
282
|
+
# ========================================================================= #
|
283
|
+
# === F-Plasmid PHAGE
|
284
|
+
# ========================================================================= #
|
285
|
+
div(id: 'f_plasmid'){
|
286
|
+
h4 'F Plasmid'
|
287
|
+
p_default_le {
|
288
|
+
e 'Das F Plasmid insertiert mittels IS Sequenzen.'
|
289
|
+
}
|
290
|
+
}
|
291
|
+
# ========================================================================= #
|
292
|
+
# === CCA adding Enzyme
|
293
|
+
# ========================================================================= #
|
294
|
+
header 'CCA adding Enzyme'
|
295
|
+
div_default_le {
|
296
|
+
p_default_le {
|
297
|
+
lem 'An dieser Stelle werden einige Fakten zum <b>CCA-adding Enzyme</b>
|
298
|
+
erwähnt.'
|
299
|
+
br
|
300
|
+
lem "Dieses Enzym hängt an 3' Ende von tRNAs die Sequenz <b>CCA</b> an."
|
301
|
+
br
|
302
|
+
lem 'Interessanterweise will dieses Enzym lieber CCC hinzufügen,
|
303
|
+
die Anwesenheit von ATP verhindert dies jedoch, und so wird
|
304
|
+
als letzter Schritt ein Adenin hinzugefügt.'
|
305
|
+
br
|
306
|
+
lem 'ATP scheint auch das weitere Hinzufügen von Cytosin zu verhindern.'
|
307
|
+
br
|
308
|
+
lem 'Mit anderen Worten - E. coli CCA enzyme ist eigentlich eine
|
309
|
+
poly(C) Polymerase, aber dank der Gegenwart von ATP
|
310
|
+
wird die Spezifität geändert.'
|
311
|
+
br
|
312
|
+
lem 'Dies erinnert an die poly(A) polymerase.'
|
313
|
+
}
|
314
|
+
}
|
315
|
+
# ========================================================================= #
|
316
|
+
# Chemische Struktur von DNA
|
317
|
+
# ========================================================================= #
|
318
|
+
header 'Chemische Struktur der DNA'
|
319
|
+
div_default_le {
|
320
|
+
dimg :chemische_struktur_dna,
|
321
|
+
'round_black2 marl1em'
|
322
|
+
}
|
323
|
+
# ========================================================================= #
|
324
|
+
# === Wobble Regeln in der Genetik
|
325
|
+
# ========================================================================= #
|
326
|
+
div_default_le {
|
327
|
+
fancy2 'Wobble Regeln in der Genetik',
|
328
|
+
'marb2px',
|
329
|
+
'wobble' # rf stdk wobble
|
330
|
+
table2('marl2em pad0_5em','','RANDOM_BORDER_2PX',
|
331
|
+
"<b>5' end of Anticodon (tRNA)</b>","<b>3' end of Codon (mRNA)</b>",
|
332
|
+
'G','C/U',
|
333
|
+
'A','U',
|
334
|
+
'C','G',
|
335
|
+
'U','A/G',
|
336
|
+
'I','U/C/A'
|
337
|
+
)
|
338
|
+
}
|
339
|
+
# ========================================================================= #
|
340
|
+
# === Introns
|
341
|
+
# ========================================================================= #
|
342
|
+
# http://localhost/programming/ruby/src/roebe/lib/roebe/www/genetics/genetics.cgi#introns
|
343
|
+
# ========================================================================= #
|
344
|
+
div_default_le {
|
345
|
+
fancy2 'Introns'
|
346
|
+
p_default_le {
|
347
|
+
e 'The three major structures of Introns are:'
|
348
|
+
br; reset_the_counter
|
349
|
+
counter "5’ splice site",'BOLD marl2em'
|
350
|
+
counter 'Branch point sequence','BOLD marl2em'
|
351
|
+
counter "3’ splice site",'BOLD marl2em'
|
352
|
+
br
|
353
|
+
e 'Introns could be called <b>evolutionary relics</b> colonized
|
354
|
+
by "selfish" genetic hobos.'
|
355
|
+
}
|
356
|
+
}
|
357
|
+
# ========================================================================= #
|
358
|
+
# === Okazaki Fragments
|
359
|
+
# ========================================================================= #
|
360
|
+
div_default_le {
|
361
|
+
fancy2 'Okazaki Fragments'
|
362
|
+
p_default_le {
|
363
|
+
e '<b>Okazaki Fragments</b> consist of <b>DNA</b>.'
|
364
|
+
}
|
365
|
+
}
|
366
|
+
# ========================================================================= #
|
367
|
+
# === Phenylthiocarbamide tag
|
368
|
+
# ========================================================================= #
|
369
|
+
div_default_le {
|
370
|
+
fancy2 'PTC - Phenylthiocarbamide'
|
371
|
+
p_default_le {
|
372
|
+
dimg 'science/chemistry/PHENYLTHIOCARBAMIDE.png',
|
373
|
+
'marl2em'
|
374
|
+
brbr
|
375
|
+
e '<b>Phenylthiocarbamide</b> ist eine organische Verbindung, die
|
376
|
+
entweder sehr bitter schmeckt, oder überhaupt nicht - je nachdem
|
377
|
+
welche Gene der Träger hat. (Die Fähigkeit PTC zu schmecken
|
378
|
+
ist ein dominante Eigenschaft des Gens, und der Test auf
|
379
|
+
<b>PTC Sensitivity</b> ist einer der häufigsten genetischen
|
380
|
+
Tests bei Menschen.)'
|
381
|
+
}
|
382
|
+
}
|
383
|
+
# ========================================================================= #
|
384
|
+
# === Hyperchromizität
|
385
|
+
# ========================================================================= #
|
386
|
+
fancy4 'Hyperchromizität'
|
387
|
+
p_default_le {
|
388
|
+
e '<b>Einzelsträngige DNA</b> absorbiert Ultraviolettstrahlung anders
|
389
|
+
als doppelsträngige DNA. Bei einer Wellenlänge von <b>260nm</b>
|
390
|
+
absorbiert ssDNA diese Strahlung 1,4 mal mehr als dsDNA - dies
|
391
|
+
ist mit dem Begriff <b>Hyperchromizität</b> gemeint.'
|
392
|
+
}
|
393
|
+
# ========================================================================= #
|
394
|
+
# === The Telomerase
|
395
|
+
# ========================================================================= #
|
396
|
+
fancy4 'The Telomerase'
|
397
|
+
p_default_le {
|
398
|
+
e 'The <b>Telomerase</b> - an enzyme - regenerates the telomeres.'
|
399
|
+
br
|
400
|
+
e "This enzyme has a RNA component and binds to the 3' ends of
|
401
|
+
a telomere, with that RNA component. This, in turn, creates an
|
402
|
+
overhang of RNA nucleotides, which is used as a template for
|
403
|
+
the addition of DNA nucleotides on the other DNA strand (the
|
404
|
+
main DNA that has to be amplified)."
|
405
|
+
br
|
406
|
+
e 'Once that has been achieved, Telomerase moves forward
|
407
|
+
by binding to that newly synthesized DNA on the end of
|
408
|
+
the chromosome, yielding another RNA overhang. Thus, the
|
409
|
+
process is <b>repeated</b>.'
|
410
|
+
}
|
411
|
+
# ========================================================================= #
|
412
|
+
# === Ribosomes
|
413
|
+
# ========================================================================= #
|
414
|
+
div_default_le {
|
415
|
+
fancy2 'Ribosomes'
|
416
|
+
e 'Ribosomal proteins are thought to fine-tune the ribozyme
|
417
|
+
activity.'
|
418
|
+
}
|
419
|
+
# ========================================================================= #
|
420
|
+
# === andi tag
|
421
|
+
# ========================================================================= #
|
422
|
+
div_default_le {
|
423
|
+
fancy2 'ANDi','','andi'
|
424
|
+
dimg 'science/biology/ANIMALS/ANDi.jpg',
|
425
|
+
'bblack3'
|
426
|
+
e 'Der Affe ANDi - reverser Name, für <i class="BOLD ud">integrated
|
427
|
+
DNA</i> wurde 2000 gezeugt.'
|
428
|
+
p_default_le {
|
429
|
+
e 'Im <b>Januar 2000</b> erblickte ANDi in einem Labor der <b>Oregon
|
430
|
+
Health Science University</b> das Licht der Welt: Als erster
|
431
|
+
transgener Rhesusaffe, der Erbinformationen einer anderen Art
|
432
|
+
in seinen Zellen trägt.'
|
433
|
+
br
|
434
|
+
e 'Das aufwändige Experiment mit hoher Fehlerquote löste
|
435
|
+
kontroverse Diskussionen aus.'
|
436
|
+
}
|
437
|
+
p_default_le {
|
438
|
+
e 'Leicht war der Weg zu diesem Erfolg nicht: <b>224 Eizellen</b> von
|
439
|
+
Rhesus-Affen wurden mit dem Quallen-Gen manipuliert. Nach der künstlichen
|
440
|
+
Befruchtung dieser Eizellen entstanden 40 Embryos. Die wurden wiederum in
|
441
|
+
20 Leihmütter eingepflanzt, von denen nur fünf schwanger wurden. Nur
|
442
|
+
drei Affenbabys kamen am Ende lebend zur Welt - ANDi und seine
|
443
|
+
Spielkameraden. Doch nur ANDi trägt das Leuchtgen in seinem Erbgut.'
|
444
|
+
}
|
445
|
+
p_default_le {
|
446
|
+
e '<b>Wie</b> wurde <b>ANDi</b> manipuliert?'
|
447
|
+
br
|
448
|
+
e 'Die Forscher injizieren <b>nicht-infektiöse Viren</b> in eine unbefruchtete
|
449
|
+
Eizelle. Die DNA des Virus ist gleichzeitig Träger des Leuchtgens. Sie
|
450
|
+
dringt in die Chromosomen der unbefruchteten Eizelle ein. Dort baut sich
|
451
|
+
das fremde Gen in die DNA des Empfängers ein. Das Erbgut der Eizelle
|
452
|
+
trägt jetzt das Gen einer Qualle.'
|
453
|
+
}
|
454
|
+
p_default_le {
|
455
|
+
e 'Im nächsten Schritt wird das Ei künstlich befruchtet und der Embryo
|
456
|
+
einer Leihmutter eingepflanzt. Nach fünfeinhalb Monaten Schwangerschaft
|
457
|
+
wird Andi geboren. Unter dem Mikroskop wird sichtbar, dass das
|
458
|
+
Experiment geglückt ist:'
|
459
|
+
br
|
460
|
+
e 'Seine Körperzellen leuchten in fluoreszierendem Grün.','marl1em'
|
461
|
+
br
|
462
|
+
e 'Das Problem das Gerald Schatten von der Oregon Health University
|
463
|
+
hatte war das es keine isolierten Affen ES Zellen gab.'
|
464
|
+
br
|
465
|
+
e 'Als Alternative musste man einen Retrovirus verwenden, um
|
466
|
+
eine Integration der viralen DNA in die DNA der Zelle zu
|
467
|
+
ermöglichen.'
|
468
|
+
br
|
469
|
+
e 'Die Form des Retrovirus war ein "pseudo-typed retrovirus" -
|
470
|
+
es kann noch ins Genom integrieren, kann aber keine Krankheit
|
471
|
+
mehr auslösen da die meisten anderen Gene entfernt wurden.'
|
472
|
+
}
|
473
|
+
p_default_le {
|
474
|
+
e 'By placing a foreign gene (transgene) into a pseudo-typed
|
475
|
+
retrovirus and injecting the virus into the ova of an
|
476
|
+
organism, the foreign gene is integrated into the eggs’
|
477
|
+
DNA.'
|
478
|
+
br
|
479
|
+
e 'In vitro fertilization can then be used to produce embryos. Every cell in the resulting
|
480
|
+
embryo carries the foreign gene because every cell comes from
|
481
|
+
the original fertilized ovum.'
|
482
|
+
br
|
483
|
+
e 'This is the strategy used by the scientists to insert the GFP gene
|
484
|
+
into a rhesus monkey.'
|
485
|
+
br
|
486
|
+
e 'The problem with this strategy is that there is no control over the site
|
487
|
+
of integration of the transgene.'
|
488
|
+
e 'Integration into the genome is random, and this can have unwanted side-effects.'
|
489
|
+
e 'If the transgene inserts into another gene, the functioning of that gene can
|
490
|
+
be altered or completely eliminated which may result in developmental defects.'
|
491
|
+
}
|
492
|
+
p_default_le {
|
493
|
+
e 'Ein Hauptproblem dabei ist, das die Integration ins Genom zufällig erfolgen
|
494
|
+
kann - und an manchen Stellen im Genom wird diese Information überhaupt
|
495
|
+
nicht mehr aufgerufen, und damit auch nicht mehr produziert.'
|
496
|
+
}
|
497
|
+
p_default_le {
|
498
|
+
e ' A. W. S. Chan, K. Y. Chong, C. Martinovich, C. Simerly, G. Schatten*,
|
499
|
+
"Transgenic Monkeys Produced by Retroviral Gene Transfer into Mature Oocytes"
|
500
|
+
Science, Vol. 291, pp. 309-312 (January 12, 2001).'
|
501
|
+
br
|
502
|
+
a 'https://www.sciencemag.org/cgi/content/abstract/291/5502/309',
|
503
|
+
content: 'Abstract',
|
504
|
+
css_class: 'BOLD mars1em'
|
505
|
+
}
|
506
|
+
}
|
507
|
+
# ========================================================================= #
|
508
|
+
# === pathways tag
|
509
|
+
# ========================================================================= #
|
510
|
+
fancy2 'Genetic and Biochemical Pathways'
|
511
|
+
div_default_le {
|
512
|
+
p_default_le {
|
513
|
+
e 'Neurospora Merksatz:'
|
514
|
+
br
|
515
|
+
e 'Ornithin-Citrullin-Arginin (<b>OCA</b>)',
|
516
|
+
'marl2em'
|
517
|
+
}
|
518
|
+
}
|
519
|
+
# ========================================================================= #
|
520
|
+
# === Das lac-Operon
|
521
|
+
# ========================================================================= #
|
522
|
+
# http://localhost/programming/ruby/src/roebe/lib/roebe/www/genetics/genetics.cgi#das_lac_operon
|
523
|
+
# ========================================================================= #
|
524
|
+
fancy2 'Das lac-Operon'
|
525
|
+
p_default_le {
|
526
|
+
e 'Das <b>lac-Operon</b> wird von Bakterien herangezogen um den Zucker
|
527
|
+
<b>Lactose</b> zu metabolisieren. Der Vorteil eines Operons ist das
|
528
|
+
zusammengehörende Gene koordiniert exprimiert werden können.'
|
529
|
+
br
|
530
|
+
e 'Lactose wird vom Bakterium in Allolactose (=das "Umwandlungsprodukt")
|
531
|
+
konvertiert. Dies ist zugleich das Molekül, das das lac-Operon
|
532
|
+
aktivieren kann.'
|
533
|
+
br
|
534
|
+
e '<b>IPTG</b> (Isopropylthiogalactosid) ist <b>ein künstlicher Inhibitor des
|
535
|
+
lac-Operon</b>. Es kann von der Zelle nicht gespalten werden.'
|
536
|
+
br
|
537
|
+
e 'Die <b>Beta-Galactosidase</b> (lacZ-Gen) wirkt als <b>Tetramer</b>
|
538
|
+
und spaltet das Discacharid Lactose in Glucose und Galactose. Jedes
|
539
|
+
Monomer besteht aus 1023 Aminosäuren.'
|
540
|
+
br
|
541
|
+
e 'Die Induktion des lac-Operons erfolgt sehrschnell: bereits nach
|
542
|
+
<b>3 Minuten</b> kann eine Zunahme der intrazellulänre Menge des
|
543
|
+
Enzym Beta-Galactosiade gemessen werden. Ist Lactose die einzige
|
544
|
+
Kohlenstoffquelle so nimmt die Zahl der Enzymmoleküle von etwa 60
|
545
|
+
bis auf 60000 pro Zelle zu.'
|
546
|
+
br
|
547
|
+
e 'Das lac-Operon kodiert abgesehen von der Beta-Galactosidase
|
548
|
+
auch für eine Permease sowie eine Transacetylase.'
|
549
|
+
br
|
550
|
+
e 'Die Permease (lacY-Gen) ist ein membrangebundenes Protein, das
|
551
|
+
die Aufnahme von Lactose in die Zelle ermöglicht.'
|
552
|
+
br
|
553
|
+
e 'Die <b>Transacetylase</b> (lacA-Gen) heftet Acetylgruppen an verschiede
|
554
|
+
Galactoside an. Die physiologische Bedeutung dieses
|
555
|
+
Vorgangs ist nicht vollständig geklärt.'
|
556
|
+
br
|
557
|
+
e 'Diese drei Gene werden <b>koordiniert exprimiert</b> und liegen
|
558
|
+
nach ihrer Induktion in Form einer langen, polygenen mRNA
|
559
|
+
(transkribiert) vor.'
|
560
|
+
br
|
561
|
+
e 'Wird das lacI Gen mutiert, so sieht man bei diesen Mutanten
|
562
|
+
eine maximale Menge der lac-Operon Genprodukte (lacZ, lacY und lacA)
|
563
|
+
vorliegen. Normalerweise ist der Promoter des lacI Gens ein
|
564
|
+
schwacher Promoter.'
|
565
|
+
}
|
566
|
+
# ========================================================================= #
|
567
|
+
# === tRNAs
|
568
|
+
# ========================================================================= #
|
569
|
+
header 'tRNAs'
|
570
|
+
show_tRNA
|
571
|
+
# ======================================================================= #
|
572
|
+
# === Das Werner Syndrom
|
573
|
+
# ======================================================================= #
|
574
|
+
header 'Werner Syndrom (WS)'
|
575
|
+
p_default_le {
|
576
|
+
e 'Werner Syndrome (WS) is a rare progeroid disorder that gives
|
577
|
+
rise to <b class="ud">rapid aging phenotype</b> and <b>increased
|
578
|
+
cancer predisposition</b>.'
|
579
|
+
br
|
580
|
+
e 'WS is caused by mutations to a single gene, <b>WRN</b>, that
|
581
|
+
was identified in the year <b>1997</b>.'
|
582
|
+
br
|
583
|
+
e 'WRN encodes for a <b>1432 amino acid protein</b>, WRN, that is
|
584
|
+
known to contain both exonuclease and helicase activities.'
|
585
|
+
br
|
586
|
+
e 'WRN belongs to the <b>RecQ helicase</b> family of genes, the
|
587
|
+
first member of which was discovered in E. coli. The family is
|
588
|
+
quite ubiquitously spread throughout the three domains of life.'
|
589
|
+
br
|
590
|
+
e 'A <b>RecQ helicase</b> is present as a single copy in most unicellular
|
591
|
+
organisms and multiple copies in higher eukaryotes. Five RecQ
|
592
|
+
helicases are present in humans, three of which give rise to
|
593
|
+
genetic defects, WS, Bloom syndrome (BS) and Rothmund-Thomson
|
594
|
+
syndrome (RTS).'
|
595
|
+
br
|
596
|
+
e 'However, <b>WRN</b> is unique among RecQ helicases in coupling
|
597
|
+
an exonuclease domain coupled to a helicase domain, on the same
|
598
|
+
polypeptide.'
|
599
|
+
br
|
600
|
+
dimg 'science/WERNER_SYNDROME.jpg',
|
601
|
+
'marl1em round_black3'
|
602
|
+
}
|
603
|
+
# ========================================================================= #
|
604
|
+
# === Knowledge versus Genes
|
605
|
+
# ========================================================================= #
|
606
|
+
fancy2 'Knowledge versus Genes'
|
607
|
+
div_default_le {
|
608
|
+
e 'Knowledges and Genes are propagated in fundamentally
|
609
|
+
different ways. Every human being of every generation has
|
610
|
+
received genes that were present within the gene pool of
|
611
|
+
the previous generation. Knowledge, on the other hand,
|
612
|
+
expands and accumulates, allowing every generation to
|
613
|
+
possess knowledge that did not exist
|
614
|
+
in the previous generation.'
|
615
|
+
}
|
616
|
+
# ========================================================================= #
|
617
|
+
# === Albinism
|
618
|
+
# ========================================================================= #
|
619
|
+
header 'Albinimus',
|
620
|
+
id: 'albinism'
|
621
|
+
div_default_le {
|
622
|
+
p_default_le {
|
623
|
+
e 'Albinism is caused by a defect in one of the enzymes
|
624
|
+
required to produce melanin, the pigment that darkens
|
625
|
+
our skin, hair and eyes.'
|
626
|
+
br
|
627
|
+
e 'The normal function of melanin is to protect the DNA of skin
|
628
|
+
cells from the damaging effects of ultraviolet radiation (UV)
|
629
|
+
(in sunlight).'
|
630
|
+
}
|
631
|
+
}
|
632
|
+
# ========================================================================= #
|
633
|
+
# === Recombination
|
634
|
+
# ========================================================================= #
|
635
|
+
# http://localhost/programming/ruby/src/roebe/lib/roebe/www/genetics/genetics.cgi#recombination
|
636
|
+
# ========================================================================= #
|
637
|
+
cheader 'Recombination'
|
638
|
+
div_default_le {
|
639
|
+
p_default_le {
|
640
|
+
e '<b>Recombination</b> is initiated when the enzyme <b>Spo11</b> makes
|
641
|
+
DNA double-strand cuts in one of the chromatids that will recombine.'
|
642
|
+
br
|
643
|
+
e 'This step is very similar to what happens during the repair
|
644
|
+
of double-strand breaks in dividing (eukaryotic) cells.'
|
645
|
+
}
|
646
|
+
}
|
647
|
+
# ========================================================================= #
|
648
|
+
# === Pedigree symbols explained
|
649
|
+
# ========================================================================= #
|
650
|
+
fancy2 'Pedigree symbols explained'
|
651
|
+
div_default_le {
|
652
|
+
dimg 'science/genetics/pedigree_symbols_explained.png',
|
653
|
+
'round_black3 mars3em'
|
654
|
+
}
|
655
|
+
# ========================================================================= #
|
656
|
+
# === TOP1-Gen
|
657
|
+
# ========================================================================= #
|
658
|
+
fancy2 'TOP1-Gen'
|
659
|
+
div_default_le {
|
660
|
+
e ' Das <b>TOP1-Gen</b> <two>im menschlichen Genom</two> kodiert
|
661
|
+
für <b>Typ-I-DNA-Topoisomerase</b>.'
|
662
|
+
}
|
663
|
+
# ========================================================================= #
|
664
|
+
# === Nicht-proteinkodierende RNAs
|
665
|
+
# ========================================================================= #
|
666
|
+
fancy2 'Nicht-proteinkodierende RNAs'
|
667
|
+
div_default_le {
|
668
|
+
e '<b>ncRNA</b> steht für <one>nicht-kodierende RNA</one>
|
669
|
+
(eigentlich <two>non-coding RNA</two>). Beispiele hierfür wären
|
670
|
+
tRNAs oder rRNAs.'
|
671
|
+
}
|
672
|
+
# ========================================================================= #
|
673
|
+
# === Slogans
|
674
|
+
# ========================================================================= #
|
675
|
+
fancy2 'Slogans'
|
676
|
+
p_default_le {
|
677
|
+
e 'The minor DNA groove is less rich in chemical information
|
678
|
+
than is the major DNA groove.'
|
679
|
+
br
|
680
|
+
e 'Each gene discovery project begins with a hunt for mutants
|
681
|
+
affecting the biological process that is the focus of the
|
682
|
+
research.'
|
683
|
+
br
|
684
|
+
e 'In Bakterien kodiert <b>rpoH</b> für den Sigmafaktor 32.'
|
685
|
+
br
|
686
|
+
e 'Das Trockengewicht einer typischen Prokaryotenzelle
|
687
|
+
besteht zu rund 50% aus Kohlenstoff.'
|
688
|
+
br
|
689
|
+
e 'In Textilien wird oft <b class="FI">Lindan</b> verwendet,
|
690
|
+
ein Giftstoff.'
|
691
|
+
br
|
692
|
+
e '<b>Aldosteron</b> scheint mitzuhelfen, das man im Alter besser hört.'
|
693
|
+
br
|
694
|
+
e 'DNA is the ultimate molecule.'
|
695
|
+
br
|
696
|
+
e 'Epigenetic silencing can be inherited from one cell
|
697
|
+
generation to the next.'
|
698
|
+
br
|
699
|
+
e 'Can an organism be conceived of as a mere mosaic of
|
700
|
+
traits determined by genes?'
|
701
|
+
br
|
702
|
+
e 'The genome is the living blueprint of an organism.'
|
703
|
+
br
|
704
|
+
e 'At around the time when the word genes was defined,
|
705
|
+
genes could be regarded as abstract elements in an
|
706
|
+
equally abstract space.'
|
707
|
+
br
|
708
|
+
e 'Conjugation is sex-like fusion.'
|
709
|
+
br
|
710
|
+
e 'RNA ist reaktiver als DNA, da der Zucker eine zusätzliche
|
711
|
+
OH-Gruppe am 2-prime C-Atom enthält.'
|
712
|
+
br
|
713
|
+
e 'One common grouping of transposable elements is whether
|
714
|
+
they have to make use of reverse transcription in order to
|
715
|
+
transpose or whether they do not.'
|
716
|
+
br
|
717
|
+
e 'As early as the 1920s, many geneticists came to believe
|
718
|
+
that genes must be material particles.'
|
719
|
+
br
|
720
|
+
e 'Autocatalysis in genetics refers to the capacity of genes
|
721
|
+
to initiate synthetic processes that ultimately yield copies
|
722
|
+
of the genes themselves in order to propagate the genetic
|
723
|
+
material from cell to cell and from generation to generation.'
|
724
|
+
br
|
725
|
+
e 'The F-plasmid can assume both an autonomous and an
|
726
|
+
integrated state.'
|
727
|
+
br
|
728
|
+
e 'CpG (CG) in eukaryotic DNA acts as an <b>epigenetic
|
729
|
+
signal</b>.'
|
730
|
+
br
|
731
|
+
e 'Genetically identical twings might still be epigenetically different.'
|
732
|
+
br
|
733
|
+
e 'Centromeres are epigenetically defined.'
|
734
|
+
br
|
735
|
+
e 'Chromatin structure is able to regulate the expression of genes.'
|
736
|
+
br
|
737
|
+
e 'Classical genetics was a method to expand biological knowledge.'
|
738
|
+
br
|
739
|
+
e 'Geneticists make a large proportion of their inferences by
|
740
|
+
manipulating the system and observing the effects.'
|
741
|
+
br
|
742
|
+
e 'Maternal imprinting means that a copy of a gene derived from
|
743
|
+
the mother will become inactivated.'
|
744
|
+
br
|
745
|
+
e 'The highly efficient system of homologous recombination in
|
746
|
+
Yeast allows the alteration of any chosen chromosomal
|
747
|
+
sequence at will.'
|
748
|
+
br
|
749
|
+
e '<b>AUGA</b> ist eine besondere Sequenz, da sie sowohl ein
|
750
|
+
Startcodon (AUG) als auch ein Stopcodon (UGA) besitzt.'
|
751
|
+
br
|
752
|
+
e 'The hunt for the molecular basis of heredity began in earnest
|
753
|
+
with an experiment by Frederick Griffith, who was wirking with
|
754
|
+
a virulent strain of Streptococcus pneumoniae.'
|
755
|
+
br
|
756
|
+
e 'The Avery–MacLeod–McCarty experiment in 1944 showed that
|
757
|
+
the "transforming principle" is in fact DNA.'
|
758
|
+
br
|
759
|
+
e 'Crossovers können sich gegenseitig inhibieren, das heisst
|
760
|
+
das in unmittelbarer Nähe eines Crossovers kein weiteres
|
761
|
+
auftritt.'
|
762
|
+
br
|
763
|
+
e 'All cells are unified by the facts that their genetic
|
764
|
+
blueprints are encoded in DNA.'
|
765
|
+
br
|
766
|
+
e "- Alfred Sturtevant's experiments showed that the phenotypic
|
767
|
+
expression of a mutation could be affected by the location of
|
768
|
+
the mutated gene on the chromosome."
|
769
|
+
br
|
770
|
+
e 'Chromatin loops are a higher level of chromatin structure.'
|
771
|
+
br
|
772
|
+
e 'RNA folds up by intramolecular base pairing.'
|
773
|
+
br
|
774
|
+
e 'Die Aufgabe von mTORC1 ist es die Translation von
|
775
|
+
Proteinen zu aktivieren.'
|
776
|
+
br
|
777
|
+
e 'Imprinted genes can often be found to be clustered together,
|
778
|
+
aka aggregated as a unit.'
|
779
|
+
br
|
780
|
+
e 'Plasmids are often important for virulence; for
|
781
|
+
instance, <i>Bacillus</i> anthracis has 2 plasmids required
|
782
|
+
for is virulence properties.'
|
783
|
+
br
|
784
|
+
e 'Die Modifikation von Histonen verändert die
|
785
|
+
Chromatinfunktion.'
|
786
|
+
br
|
787
|
+
e 'The diploid character of the eukaryotic cell allows for
|
788
|
+
a mutation in one gene to be masked by a second, unmutated
|
789
|
+
gene copy.'
|
790
|
+
br
|
791
|
+
e 'Die SRY-Region kann sich "bewegen", zum Beispiel auf
|
792
|
+
das X-Chromosom.'
|
793
|
+
br
|
794
|
+
e 'Heterochromatin propagates from a nucleation event.'
|
795
|
+
br
|
796
|
+
e 'Perizentrische Inversionen kann man oft daran
|
797
|
+
erkennen, das das Centromer seine Position im
|
798
|
+
Chromosom ändert.'
|
799
|
+
br
|
800
|
+
e 'Die Funktion des Zellkerns ist die Aufbewahrung
|
801
|
+
der DNA.'
|
802
|
+
br
|
803
|
+
e 'HP-1, heterochromatin protein-1, is required in
|
804
|
+
some way to generate the higher order chromatin
|
805
|
+
structure associated with heterochromatin.'
|
806
|
+
br
|
807
|
+
e 'DNA Methylation acts as an epigenetic mark.'
|
808
|
+
br
|
809
|
+
e 'Der Unterschied zwischen dem Menschen- und Schimpansengenom
|
810
|
+
liegt hauptsächlich in der chromosomalen Organisation (und
|
811
|
+
nicht in der DNA Sequenz)'
|
812
|
+
br
|
813
|
+
e 'Der Spindel-Checkpoint arretiert die Teilung bis alle
|
814
|
+
Chromosomen richtig in der Spindel angeordnet sind.'
|
815
|
+
br
|
816
|
+
e 'Transposons create mutations and can thusly be considered to
|
817
|
+
be one of the raw materials for evolution.'
|
818
|
+
br
|
819
|
+
e 'The dark-staining bands in polytene chromosomes act as
|
820
|
+
useful chromosomal landmarks.'
|
821
|
+
br
|
822
|
+
e 'In most diploid eukaryotes, sexual reproduction is the
|
823
|
+
only natural mechanism for producing new members of the
|
824
|
+
species.'
|
825
|
+
br
|
826
|
+
e 'The total gene content of all organisms inhabiting an
|
827
|
+
environment is known as its metagenome.'
|
828
|
+
br
|
829
|
+
e 'In Eukaryoten ist die Termination der Transkription
|
830
|
+
eng gekoppelt mit dem <b>Poly-Adenylierungssignal</b>.'
|
831
|
+
br
|
832
|
+
e 'Hfq acts as a RNA chaperone.'
|
833
|
+
br
|
834
|
+
e 'Die Behinderung der Segregation nur eines Chromosoms
|
835
|
+
vereitelt die Segregation auch aller anderen Chromosomen.'
|
836
|
+
br
|
837
|
+
e 'Overlapping genes are coupled, meaning that if you
|
838
|
+
manipulate one gene, the other coupled gene might be
|
839
|
+
affected by this change as well. Thus, this constitutes
|
840
|
+
a design constraint.'
|
841
|
+
br
|
842
|
+
e 'Eine Gensequenz ohne Promotor bleibt stumm.'
|
843
|
+
br
|
844
|
+
e 'RNA-Moleküle haben nur eine begrenzte Lebensdauer
|
845
|
+
("half-life") in der Zelle.'
|
846
|
+
br
|
847
|
+
e 'Exon to Intron comparison revealed that exons happen
|
848
|
+
to have a low "signal-to-noise" ratio in the human genome.'
|
849
|
+
br
|
850
|
+
e 'Exons can be skipped in alternative splicing.'
|
851
|
+
br
|
852
|
+
e 'Die Verteilung des Spo11 Proteins entlang der Chromosomen
|
853
|
+
korreliert mit dem Auftreten meiotischer Doppelstrangbrüche.'
|
854
|
+
br
|
855
|
+
e 'H2AX becomes phosphorylated at sites of DNA-strand
|
856
|
+
breakage.'
|
857
|
+
br
|
858
|
+
e "- Whereas prokaryotic genes are generally accessible and
|
859
|
+
'on' unless repressed, eukaryotic genes are inaccessible
|
860
|
+
and 'off' unless activated."
|
861
|
+
br
|
862
|
+
e 'Transcription is repressed when the promoter is wound
|
863
|
+
up in a nucleosome.'
|
864
|
+
br
|
865
|
+
e 'Ein "scaffold complex" beschleunigt die Reinitiation
|
866
|
+
der DNA-Replikation, die dadurch schneller ablaufen kann.'
|
867
|
+
br
|
868
|
+
e 'In mammals, X chromosome inactivation begins at the
|
869
|
+
XIC (X-Inactivation Center).'
|
870
|
+
br
|
871
|
+
e 'siRNA ultimately helps protect the integrity of
|
872
|
+
genomes.'
|
873
|
+
br
|
874
|
+
e 'A phosphorylation / dephosphorylation cycle controls
|
875
|
+
transription and RNA maturation.'
|
876
|
+
br
|
877
|
+
e 'Die 30nm DNA-Fiber entsteht in dem der Histon-DNA
|
878
|
+
Komplex sich zu zu dieser Faser windet.'
|
879
|
+
br
|
880
|
+
e 'Chiasmen sind die cytologisch sichtbare Folge
|
881
|
+
von Crossovers in Diplotän und Diakinese.'
|
882
|
+
br
|
883
|
+
e 'Eine Chromodomäne kann methylierte Histone erkennen.'
|
884
|
+
br
|
885
|
+
e '"Crossing over" durchbricht die chromosomale Kopplung
|
886
|
+
von Genen.'
|
887
|
+
br
|
888
|
+
e 'Jede aktive Polymerase führt zur Entstehung einer
|
889
|
+
"<i>transcription bubble</i>".'
|
890
|
+
br
|
891
|
+
e 'XIC constitutes a genomic locus for non-coding RNAs
|
892
|
+
that orchestrate the inactivation of extra X chromosomes
|
893
|
+
in mammalian cells.'
|
894
|
+
br
|
895
|
+
e 'Verschiedene Abschnitte im Chromosom werden zu
|
896
|
+
unterschiedlichen Zeiten in der S-Phase repliziert.'
|
897
|
+
br
|
898
|
+
e 'To maintain the stability of a species, replication
|
899
|
+
of the DNA of a given organism must be almost free of
|
900
|
+
error.'
|
901
|
+
br
|
902
|
+
e 'Jedes Bivalent hat mindestens immer ein
|
903
|
+
Crossover-Ereignis, so klein dies auch immer sein
|
904
|
+
mag. Dies ist unbedingt nötig, da ansonsten homologe
|
905
|
+
Chromosomen nicht voneinander segregieren können.'
|
906
|
+
br
|
907
|
+
e 'Bei Kälte mögen Sekundärstrukturen in der RNA zu stabil
|
908
|
+
werden.'
|
909
|
+
br
|
910
|
+
e 'Pol III Promoters are located downstream from
|
911
|
+
the transcription start site.'
|
912
|
+
br
|
913
|
+
e 'Alternatives Splicing führt zur Diversifizierung des
|
914
|
+
Proteoms.'
|
915
|
+
br
|
916
|
+
e 'In eukaryotes, transcription levels are made finely
|
917
|
+
adjustable in a chromatin environment by clustering
|
918
|
+
binding sites into enhancers.'
|
919
|
+
br
|
920
|
+
e 'Epigenetic Mechanisms lead to heritable changes in
|
921
|
+
gene functions which are not based on changes in the
|
922
|
+
DNA Sequence itself.'
|
923
|
+
br
|
924
|
+
e '<b>IRES</b> are RNA sequences that function like
|
925
|
+
<b>prokaryotic RBS</b>.'
|
926
|
+
br
|
927
|
+
e 'In contrast with the customary picture of DNA as
|
928
|
+
an extended double helix, structural deformation of
|
929
|
+
DNA to bend or fold into a more compact form is the
|
930
|
+
rule rather than an exception.'
|
931
|
+
br
|
932
|
+
e 'Wenn sich neu synthetisierte DNA-Moleküle (die
|
933
|
+
Chromatiden) nicht auf Tochterkerne aufteilen können
|
934
|
+
entstehen polyploide Zellkerne.'
|
935
|
+
br
|
936
|
+
e 'Eine wahrscheinliche Ursache für die Entstehung
|
937
|
+
von Aneuploidien ist die verminderte Cohäsion der
|
938
|
+
Schwesterchromatiden.'
|
939
|
+
br
|
940
|
+
e 'Innerhalb der Chromosomendomänen ("chromosomal
|
941
|
+
territories") im Zellkern ist das Chromatin
|
942
|
+
<b>nicht</b> zufällig angeordnet.'
|
943
|
+
br
|
944
|
+
e 'Ein Sigmafaktor steuert die Fähigkeit der RNA
|
945
|
+
Polymerase Promoter-DNA von anderer DNA zu
|
946
|
+
unterscheiden; man spricht hierbei von
|
947
|
+
"Diskriminierung von DNA Elementen".'
|
948
|
+
br
|
949
|
+
e 'The SWI-SNF complex can <b>reposition nucleosomes</b>
|
950
|
+
in a test-tube assay if ATP is provided as an
|
951
|
+
energy source.'
|
952
|
+
br
|
953
|
+
e 'Elongation, Termination of Transcription and RNA
|
954
|
+
processing are interconnected to one another.'
|
955
|
+
br
|
956
|
+
e 'Incorporation of Histone H3.3 serves as an
|
957
|
+
epigenetic mark for <b>transcriptionally active
|
958
|
+
chromatin</b>.'
|
959
|
+
br
|
960
|
+
e 'Ligand binding of RNA often produces a change in
|
961
|
+
the secondary structure of RNA.'
|
962
|
+
br
|
963
|
+
e 'DNA functions as <b>a template for biological
|
964
|
+
complexity</b>.'
|
965
|
+
br
|
966
|
+
e 'The ribosome behaves like a small, migrating
|
967
|
+
factory.'
|
968
|
+
br
|
969
|
+
e 'mRNA nonsense mutation may trigger degradation of mRNA.'
|
970
|
+
br
|
971
|
+
e 'mRNA dient als Template für protein synthesis und
|
972
|
+
wird als Ribonucleprotein exportiert.'
|
973
|
+
br
|
974
|
+
e 'Signaling Pathways are the superhighways of the cell.'
|
975
|
+
br
|
976
|
+
e 'Nucleosomes are inhibitors of transcription because
|
977
|
+
DNA is packed very tightly and is not accessible for
|
978
|
+
RNA polymerases while condensed.'
|
979
|
+
br
|
980
|
+
e 'DNA Melting im Zuge der Transkription geschieht am
|
981
|
+
-10 Bereich; somit ist die -10 Region wichtiger als die
|
982
|
+
-35 Region in Bezug auf die Genexpression.'
|
983
|
+
br
|
984
|
+
e 'TFIIH controls the ATP-dependent transition of the
|
985
|
+
preinitiation complex to the open complex.'
|
986
|
+
br
|
987
|
+
e 'Sobald mehr als 10 Nukleotide synthetisiert worden
|
988
|
+
sind, escaped die Polymerase vom Promoter.'
|
989
|
+
br
|
990
|
+
e 'Nucleosomes are an invariant component of euchromatic
|
991
|
+
and heterochromatin in the interphase nucles and of
|
992
|
+
mitotic chromosomes.'
|
993
|
+
br
|
994
|
+
e 'Heterochromatin can serve as a defense mechanism
|
995
|
+
against foreign DNA, by silencing transposons.'
|
996
|
+
br
|
997
|
+
e 'Point mutations in the promoter and promoter-proximal
|
998
|
+
elements hinder transcription of the Beta-globin gene.'
|
999
|
+
br
|
1000
|
+
e 'LCRs und Insulator-Sequenzen können transkribierte
|
1001
|
+
und nicht-transkribierte Bereiche durch die Bildung von
|
1002
|
+
"chromatin-hubs" voneinander trennen.'
|
1003
|
+
br
|
1004
|
+
e 'Histone N-terminal tails provide a molecular handle
|
1005
|
+
to manipulate DNA accessibility in chromatin.'
|
1006
|
+
br
|
1007
|
+
e 'CTD Phosphorylierung bestimmt bestimmen wann
|
1008
|
+
Proteine an den Polymerasekomplex binden können im
|
1009
|
+
Zuge der Transkription.'
|
1010
|
+
br
|
1011
|
+
e 'Barrier insulators prevent the spreading of
|
1012
|
+
heterochromatin by creating a local environment
|
1013
|
+
unfavourable to heterochromatin formation.'
|
1014
|
+
br
|
1015
|
+
e 'Inactivation spreads from heterochromatin
|
1016
|
+
into the adjacent region for a variable distance.'
|
1017
|
+
br
|
1018
|
+
e 'Bei <b>Translokations-Trisomien</b> ist der Grund für
|
1019
|
+
die Entstehung eines aneuploiden Gameten eine Fusion
|
1020
|
+
von Chromosomen, gefolgt von einem meiotischen
|
1021
|
+
Paarungs- und Segregations-Defekt des in der Regel
|
1022
|
+
kleineren Fusionspartners.'
|
1023
|
+
br
|
1024
|
+
e 'A barrier insulator can recruit HATs (Histone
|
1025
|
+
Acetyltransferases) and, in doing so, ensure that
|
1026
|
+
the adjacent histones are hyperacetylated.'
|
1027
|
+
br
|
1028
|
+
e 'Historically DNA seemed to be far too simple and
|
1029
|
+
too unspecific to support complex biological functions.'
|
1030
|
+
br
|
1031
|
+
e 'The stereochemical fit between A=T and C☰G in
|
1032
|
+
dsDNA is mediated by hydrogen bonds.'
|
1033
|
+
br
|
1034
|
+
e 'Sister chromatids are held together by the multi-subunit
|
1035
|
+
protein complex called <b>cohesin</b>.'
|
1036
|
+
br
|
1037
|
+
e 'Shugoshin protects cohesin from being degraded by
|
1038
|
+
separase at the centromeric regions.'
|
1039
|
+
br
|
1040
|
+
e 'Genetic information is ultimately equivalent to
|
1041
|
+
biochemical function.'
|
1042
|
+
br
|
1043
|
+
e 'Molecular genes are not solely confined to being separate "units"
|
1044
|
+
of inheritance. More importantly they act as a complex assemblages
|
1045
|
+
of diverse activating and inhibiting mechanisms, acting in concert
|
1046
|
+
to transcribe and translate DNA templates of various makeup into
|
1047
|
+
functional protein products.'
|
1048
|
+
br
|
1049
|
+
e 'Genetics proceeds from the realm of DNA and its
|
1050
|
+
replication, to the realm of its transcription, and
|
1051
|
+
finally to that of its translation.'
|
1052
|
+
br
|
1053
|
+
e 'The molecular gene is not defined by its physical and
|
1054
|
+
chemical materiality on the level of DNA, but rather by
|
1055
|
+
the products that result from its activity.'
|
1056
|
+
br
|
1057
|
+
e 'The capacity for autocatalysis is inherent not only in
|
1058
|
+
"ordinary" genes but in other DNA elements as well, thus
|
1059
|
+
questioning the original (historic) definition of the gene
|
1060
|
+
concept.'
|
1061
|
+
br
|
1062
|
+
e 'In 1956, Arthur Kornberg isolated the first DNA polymerase.'
|
1063
|
+
br
|
1064
|
+
e 'Gene technology allowed genetic engineers to modify model
|
1065
|
+
organism with new characteristics. Bacteria could serve as
|
1066
|
+
some kind of bioreactor.'
|
1067
|
+
br
|
1068
|
+
e 'By virtue of being patented, genes additionally assumed
|
1069
|
+
the character of commodities.'
|
1070
|
+
br
|
1071
|
+
e 'The Human Genome Project (HGP) stressed the
|
1072
|
+
detrimental, but curable role of genes in disease
|
1073
|
+
for its promotion.'
|
1074
|
+
br
|
1075
|
+
e 'Efforts to automate DNA sequencing began in the
|
1076
|
+
early 1980s.'
|
1077
|
+
br
|
1078
|
+
e 'The promise of medical salvation was very effective
|
1079
|
+
in convincing politicians to support the Human Genome
|
1080
|
+
Project.'
|
1081
|
+
br
|
1082
|
+
e 'An example for genetic polmorphism is the fact that
|
1083
|
+
the genomes of different human individuals exhibit
|
1084
|
+
considerable differences.'
|
1085
|
+
br
|
1086
|
+
e 'Some epigenetic factors can be named as an example
|
1087
|
+
that allows for information to pass from the environment
|
1088
|
+
to the genome, at the least in some organisms.'
|
1089
|
+
br
|
1090
|
+
e 'The pax6 gene product is multifunctional as well as
|
1091
|
+
redundant, to some extent. The Drosophila genome, for
|
1092
|
+
instance, contains several isoforms with virtually identical
|
1093
|
+
effects on eye formation.'
|
1094
|
+
br
|
1095
|
+
e 'Not every feature of a genome may carry some function
|
1096
|
+
that is essential to the survival of the organism.'
|
1097
|
+
br
|
1098
|
+
e 'The sequences that are annotated as "genes" represent
|
1099
|
+
only one set of the components of complex genomic ensembles.
|
1100
|
+
Thus, what is a gene is not necessarily an intrinsic property
|
1101
|
+
of the DNA sequence at hand, but subject to interpretation
|
1102
|
+
and evaluation by the genetic "decipher" system in use, by
|
1103
|
+
the corresponding cell at hand.'
|
1104
|
+
br
|
1105
|
+
e 'In regards to genetic mutations that affect an individual
|
1106
|
+
human being negatively, we can state that each embryo is
|
1107
|
+
(indirectly) playing "a game of genomic Russian roulette".'
|
1108
|
+
br
|
1109
|
+
e 'Many of these diseases that will afflict children are
|
1110
|
+
knowable in advance, before a couple even conceives.'
|
1111
|
+
br
|
1112
|
+
e 'Most genomic changes outside of protein-coding regions are
|
1113
|
+
not incompatible with vital (living) functions of a complex
|
1114
|
+
organism - such as a human being - at hand.'
|
1115
|
+
br
|
1116
|
+
e 'Genetics is a form of information science.'
|
1117
|
+
br
|
1118
|
+
e 'The old blending theory of inheritance in genetics can be
|
1119
|
+
roughly summarized as "the belief that inheritance worked like
|
1120
|
+
the mixing of fluids, such as paints".'
|
1121
|
+
br
|
1122
|
+
e 'Genetic defects can create chemical individuality among
|
1123
|
+
humans.'
|
1124
|
+
br
|
1125
|
+
e 'The shorter the generation time, the sooner the experiments
|
1126
|
+
can be completed.'
|
1127
|
+
br
|
1128
|
+
e 'An ethical dilemma in regards to engineering human beings
|
1129
|
+
in the future may be that any genetically engineered,
|
1130
|
+
homogeneous children will be scrubbed of genomic individuality.'
|
1131
|
+
br
|
1132
|
+
e 'It would be a great feat of engineering to reduce the
|
1133
|
+
burden of genetic disease while preserving the genomic
|
1134
|
+
diversity of the human species.'
|
1135
|
+
br
|
1136
|
+
e 'Genetic variation is any difference between two copies of
|
1137
|
+
the same gene or DNA molecule.'
|
1138
|
+
br
|
1139
|
+
e 'In vitro fertilization (IVF) could be used to eliminate
|
1140
|
+
(some) genetic disease, such as via <b>pre-implantation
|
1141
|
+
genetic testing</b> (PGT).'
|
1142
|
+
br
|
1143
|
+
e 'Genomic design in humans, aside from ethical considerations
|
1144
|
+
in regards to similar problems faced by eugenics, may considerably
|
1145
|
+
reduce the burden of recessive genetic diseases and some forms
|
1146
|
+
of dominant genetic disease.'
|
1147
|
+
br
|
1148
|
+
e 'Fathers contribute four times as many new mutations to their
|
1149
|
+
offspring as do mothers.'
|
1150
|
+
br
|
1151
|
+
e 'Intronic sequences found in DNA are spliced out to produce a
|
1152
|
+
mature mRNA.'
|
1153
|
+
br
|
1154
|
+
e 'Mitochondrial disorders can result from alterations in nuclear
|
1155
|
+
or mitochondrial genes.'
|
1156
|
+
br
|
1157
|
+
e 'Mutants allow a geneticist to <i>zero in on any genetic
|
1158
|
+
property</i>.'
|
1159
|
+
br
|
1160
|
+
e 'Translocation events can disrupt critical and essential genes.'
|
1161
|
+
br
|
1162
|
+
e "- Biological organisms can be viewed as nature's versatile
|
1163
|
+
engines of creation."
|
1164
|
+
br
|
1165
|
+
e 'In haploids, all alleles are expressed in the phenotype
|
1166
|
+
because there is no masking of recessives by dominant alleles
|
1167
|
+
on the other homolog.'
|
1168
|
+
br
|
1169
|
+
e 'In a diploid organism, a sterile recessive mutant can be
|
1170
|
+
propagated as a heterozygote.'
|
1171
|
+
br
|
1172
|
+
e 'Genetics is to turn the inorganic into the organic.'
|
1173
|
+
br
|
1174
|
+
e 'Alternatives Spleißen vermehrt die Codierungsmöglichkeiten
|
1175
|
+
eines Gens.'
|
1176
|
+
br
|
1177
|
+
e 'Genetics, respectively genomics, is <b>the tale of the
|
1178
|
+
genome</b>.'
|
1179
|
+
br
|
1180
|
+
e 'The story of DNA and RNA replication is that of
|
1181
|
+
<b>complementary surfaces</b>.'
|
1182
|
+
br
|
1183
|
+
e 'Diagnostic breast cancer genetic diagnostics, such as for
|
1184
|
+
the BRCA1 and BRCA2 gene, is owned by <b>Myriad Genetics</b>.'
|
1185
|
+
br
|
1186
|
+
e 'With the expression <b>a gene for a disease</b> we typically
|
1187
|
+
refer to a <b>mutation</b> in a gene that would plays a role in
|
1188
|
+
a specific disease.'
|
1189
|
+
br
|
1190
|
+
e 'Some geneticists may say that <b>the genes may load the
|
1191
|
+
gun but the environment pulls the trigger</b>.'
|
1192
|
+
br
|
1193
|
+
e 'Different RNA molecules replicate at differing rates, at the
|
1194
|
+
least in a test tube. The logical implication of this is that
|
1195
|
+
descendants of the swifter replicators naturally grow more
|
1196
|
+
common in a population.'
|
1197
|
+
br
|
1198
|
+
e 'Genes resemble manuscripts written in a four-letter alphabet.'
|
1199
|
+
br
|
1200
|
+
e 'Genes built ever more elaborate survival machines to aid
|
1201
|
+
their own replication.'
|
1202
|
+
br
|
1203
|
+
e 'RNA replicating in test tubes shows how the idea of purpose
|
1204
|
+
can apply to "mindless molecules".'
|
1205
|
+
br
|
1206
|
+
e 'Genetik ist die universelle biologische Disziplin.'
|
1207
|
+
br
|
1208
|
+
e 'DNA is at the center of the mystery of heredity.'
|
1209
|
+
br
|
1210
|
+
e 'Genetic evolution prefers to refine and extend existing
|
1211
|
+
information rather than create genuinely new information.'
|
1212
|
+
br
|
1213
|
+
e 'Genetic engineering yields the power to shape life.'
|
1214
|
+
br
|
1215
|
+
e '- Erbliche Eigenschaften legen einen Bereich fest, in dem
|
1216
|
+
<b>Variabilität</b> möglich ist.'
|
1217
|
+
br
|
1218
|
+
e '- Synthesized mRNA is interesting because it represents
|
1219
|
+
all active genes of a given cell or tissue. It also forms
|
1220
|
+
the basis for the creation of <b>cDNA libraries</b>.'
|
1221
|
+
br
|
1222
|
+
e '- The <b>telomerase</b> is <b>an unusual type of reverse
|
1223
|
+
transcriptase</b>.'
|
1224
|
+
br
|
1225
|
+
e '- Sequences in regions adjacent to the gene itself
|
1226
|
+
are called <b>cis-acting elements</b>.'
|
1227
|
+
br
|
1228
|
+
e '- Die komplexere Organisation eines Organismus schlägt sich
|
1229
|
+
jedoch in einer höheren Anzahl von Proteinen nieder.'
|
1230
|
+
br
|
1231
|
+
e '- '+squotes('It has not escaped our notice that the specific
|
1232
|
+
pairing we have postulated immediately suggests a possible
|
1233
|
+
copying mechanism for the genetic material.')
|
1234
|
+
br
|
1235
|
+
e '- <b>DNA</b> is <b>the master recipe for life</b>.'
|
1236
|
+
br
|
1237
|
+
e '- The offspring of sexually reproducing multi-cellular
|
1238
|
+
organism receive a brand-new book that melds together
|
1239
|
+
recipes from both individual parents.'
|
1240
|
+
br
|
1241
|
+
e '- We all possess genes that influence our lives in significant
|
1242
|
+
ways, such as how genes affect our height, weight, hair colour
|
1243
|
+
and skin pigmentation.'
|
1244
|
+
br
|
1245
|
+
e '- Antagnoistic pleiotropy refers to the concept of
|
1246
|
+
genes that do beneficial things early and harmful things
|
1247
|
+
later.'
|
1248
|
+
br
|
1249
|
+
e '- Extended survival means that the diseases in
|
1250
|
+
the genetic dustbin have the opportunity
|
1251
|
+
to be seen or expressed in a greater number of
|
1252
|
+
people.'
|
1253
|
+
br
|
1254
|
+
e '- Every human alive today is the most recent link in an
|
1255
|
+
unbroken chain of survivors that extends back not only to
|
1256
|
+
the originas of modern humans but to the origins of life
|
1257
|
+
on earth.'
|
1258
|
+
br
|
1259
|
+
e '- Genes play a central role in maintaining the biological
|
1260
|
+
integrity of the organism that carries them.'
|
1261
|
+
br
|
1262
|
+
e 'Natural selection is an imperfect genetic sieve that
|
1263
|
+
inevitably allows some harmful genes to leak through to
|
1264
|
+
the next generation by hitching a ride with the many genes
|
1265
|
+
that have either a neutral or beneficial effect on the
|
1266
|
+
survival and reproductive success of the individual.'
|
1267
|
+
br
|
1268
|
+
e 'Epigenetic modifications are reversible.'
|
1269
|
+
br
|
1270
|
+
e 'Nucleotides (RNA/DNA) can be called the <b>building blocks
|
1271
|
+
of life</b>, even though this is a slightly peculiar wording.'
|
1272
|
+
br
|
1273
|
+
e '- DNA is the reservoir of genetic information.'
|
1274
|
+
br
|
1275
|
+
e '- The nature of genetic information in complex organisms
|
1276
|
+
has been misunderstood since the inception of molecular
|
1277
|
+
biology, primarily because of the assumption that most
|
1278
|
+
genetic information is transacted by proteins.'
|
1279
|
+
br
|
1280
|
+
e '- Genetics determines cellular and organismal
|
1281
|
+
phenotypes.'
|
1282
|
+
br
|
1283
|
+
e '- Purines and Pyrimidines are remarkably versatile compounds.'
|
1284
|
+
br
|
1285
|
+
e '"cis"-interacting genes are located on the same chromosome.'
|
1286
|
+
br
|
1287
|
+
e '- RNA is the computational engine of the cell.'
|
1288
|
+
br
|
1289
|
+
e '- RNA is the vehicle for transgenerational soft-wired
|
1290
|
+
inheritance of experience.'
|
1291
|
+
br
|
1292
|
+
e '- mRNA is the dynamic template for protein synthesis.'
|
1293
|
+
br
|
1294
|
+
e '- Mobile genetic elements such as transposons can act
|
1295
|
+
as modifiers, suppressors or inhibitors of gene activity.'
|
1296
|
+
br
|
1297
|
+
e '- In 1961, Spiegelman and Hall showed that RNA-DNA hybrids
|
1298
|
+
exist naturally in cells.'
|
1299
|
+
br
|
1300
|
+
e 'There is a tremendous amount of DNA in the world, simply
|
1301
|
+
because there are so many different individual cells.'
|
1302
|
+
br
|
1303
|
+
e 'The vehicles of genetic information within a cell are
|
1304
|
+
the <b>chromosomes</b>.'
|
1305
|
+
br
|
1306
|
+
e 'Genes, along with environmental factors, determine the
|
1307
|
+
expression of traits.'
|
1308
|
+
br
|
1309
|
+
e 'Humans first applied genetci methods to the domestication
|
1310
|
+
of plants and animals between 10.000 and 12.000 years ago.'
|
1311
|
+
br
|
1312
|
+
e "Genetics provides one of biology's unifying principles
|
1313
|
+
because all organisms use genetic systems that have a
|
1314
|
+
number of features in common."
|
1315
|
+
br
|
1316
|
+
e 'Having two alleles is usually beneficial in that
|
1317
|
+
if one allele is defective, it could still be tolerated
|
1318
|
+
by the organism if the other allele is still functional,
|
1319
|
+
and thus able to compensate for the defective allele.'
|
1320
|
+
br
|
1321
|
+
e 'Barbara McClintock conceptualized the signatures of epigenetic
|
1322
|
+
control of gene expression decades before it was formally recognized
|
1323
|
+
and studied. She was the true pioneer of the concept of <b>the
|
1324
|
+
dynamic genome</b>.'
|
1325
|
+
br
|
1326
|
+
e 'Alleles are the alternative form of genes.'
|
1327
|
+
br
|
1328
|
+
e 'Transposition is a specialized and highly flexible
|
1329
|
+
form of <b>sequence relocation</b>.'
|
1330
|
+
br
|
1331
|
+
e 'Transposases are the most abundant and ubiquitous genes
|
1332
|
+
in nature.'
|
1333
|
+
br
|
1334
|
+
e 'Larger genomes contain proportionally more transposable
|
1335
|
+
elements than smaller genomes.'
|
1336
|
+
br
|
1337
|
+
e 'Proponents of junk DNA explicitly discouraged research
|
1338
|
+
into the possible roles of non-coding regions of genomes.'
|
1339
|
+
br
|
1340
|
+
e "McClintock demonstrated that <b>transposon mobilization</b>
|
1341
|
+
changes developmental phenotype and responses to the
|
1342
|
+
environment."
|
1343
|
+
br
|
1344
|
+
e 'Many imprinted loci differentially express overlapping
|
1345
|
+
sense and antisense transcripts.'
|
1346
|
+
br
|
1347
|
+
e 'Genetic fluidity often refers to <b>jumping genes</b> (mobile
|
1348
|
+
genetic elements).'
|
1349
|
+
br
|
1350
|
+
e '<b>Streptococcal virulence factors</b> are controlled by
|
1351
|
+
<b>regulatory RNAs</b>.'
|
1352
|
+
br
|
1353
|
+
e 'Monozygotic twins are essentially phenocopies.'
|
1354
|
+
br
|
1355
|
+
e 'X-rays greatly increase mutation rates in all organisms.'
|
1356
|
+
br
|
1357
|
+
e 'DNA can be viewed as a storage polymer for phosphate.'
|
1358
|
+
br
|
1359
|
+
e 'Molecular plasticity can be seen by an increased
|
1360
|
+
hemoglobin expression at high altitudes.'
|
1361
|
+
br
|
1362
|
+
e 'Some innate fears and phobias clearly have an
|
1363
|
+
appreciable genetic component.'
|
1364
|
+
br
|
1365
|
+
e 'The great majority of observable traits of an organism are
|
1366
|
+
traceable to the cooperative interactions of a number of
|
1367
|
+
genes.'
|
1368
|
+
br
|
1369
|
+
e 'The alleles of a gene may carry conflicting instructions.'
|
1370
|
+
br
|
1371
|
+
e 'Ein <i>Gene Drive</i> beschleunigt dramatisch die Vererbung
|
1372
|
+
einer bestimmten genetischen Veränderung.'
|
1373
|
+
br
|
1374
|
+
e 'The prime mover behind the establishment of genetics as
|
1375
|
+
a discipline was <b>William Bateson</b>.'
|
1376
|
+
br
|
1377
|
+
e 'A simple and universally accepted definition of the
|
1378
|
+
gene has never existed.'
|
1379
|
+
br
|
1380
|
+
e 'With genes, organisms have evolved a unique mechanism that allows
|
1381
|
+
them to retain a memory of past achievements, with which they
|
1382
|
+
tinker to meet challenges to their future.' # ^^^ very important
|
1383
|
+
br
|
1384
|
+
e '<b>Darwin</b> broke with an age-old tradition in which <b>the
|
1385
|
+
permanence of species was taken for granted</b>.'
|
1386
|
+
br
|
1387
|
+
e 'The unit character fallacy in genetics means to fail at
|
1388
|
+
distinguishing sufficiently between genetic factors, on the
|
1389
|
+
one hand, and the traits related to them, on the other.'
|
1390
|
+
br
|
1391
|
+
e 'Identical twins show similar — but not identical —
|
1392
|
+
propensities for drug use.'
|
1393
|
+
br
|
1394
|
+
e 'The gene, from a historic point of view such as in
|
1395
|
+
<b>classical genetics</b>, was not primarily or solely
|
1396
|
+
about determining the gene as a biological entity
|
1397
|
+
within given biological cells, but to operate on it as
|
1398
|
+
if it were a concept: <b>the concept of the gene</b>.'
|
1399
|
+
br
|
1400
|
+
e 'The structure of biological entities is always tightly
|
1401
|
+
connected to its function.'
|
1402
|
+
br
|
1403
|
+
e 'The Hardy-Weinberg law is a generalization of Mendel’s
|
1404
|
+
law of segregation.'
|
1405
|
+
br
|
1406
|
+
e 'With the advent of biotechnology, the gene became a
|
1407
|
+
technical product and a commodity.'
|
1408
|
+
br
|
1409
|
+
e 'The discovery of ribozymes complements other
|
1410
|
+
evidence suggesting that the original genetic
|
1411
|
+
material was RNA.'
|
1412
|
+
br
|
1413
|
+
e 'A very special property of DNA is its capacity to
|
1414
|
+
permit an exact copy of itself to be made.'
|
1415
|
+
br
|
1416
|
+
e 'Pleiotropy occurs when one gene has an effect on
|
1417
|
+
many different phenotypic characteristics.'
|
1418
|
+
br
|
1419
|
+
e 'Mendel concluded that genes behave like particles.'
|
1420
|
+
} # End of slogans tag
|
1421
|
+
# ========================================================================= #
|
1422
|
+
# === Links
|
1423
|
+
# ========================================================================= #
|
1424
|
+
fancy2 'Links (remote)',
|
1425
|
+
'mart1px'
|
1426
|
+
dot104 = dot104?
|
1427
|
+
p('mars1em') {
|
1428
|
+
abr 'https://www.onmeda.de/krankheiten/krankheiten_az.html',
|
1429
|
+
content: dot104+'Verschiedene Krankheiten (auf onmeda.de)',
|
1430
|
+
css_class: 'slateblue'
|
1431
|
+
abr 'https://www.embl.org/sites/heidelberg/',
|
1432
|
+
content: dot104+'EMBL in Heidelberg',
|
1433
|
+
css_class: 'slateblue'
|
1434
|
+
}
|
1435
|
+
# ========================================================================= #
|
1436
|
+
# === Local Links tag
|
1437
|
+
# ========================================================================= #
|
1438
|
+
fancy2 sg(:square_yellow, 'bblack1 marr4px')+
|
1439
|
+
'Local Links',
|
1440
|
+
'martb2px'
|
1441
|
+
div('default martb1px') {
|
1442
|
+
p('ind0px marl2em mart1px padt1px') {
|
1443
|
+
# selfy :local_science
|
1444
|
+
science_links(:local_transcription)
|
1445
|
+
}
|
1446
|
+
}
|
1447
|
+
}}
|