xcoll 0.5.12__py3-none-any.whl → 0.6.1__py3-none-any.whl

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Files changed (336) hide show
  1. xcoll/__init__.py +5 -18
  2. xcoll/__init__.py.orig +26 -0
  3. xcoll/beam_elements/__init__.py +1 -0
  4. xcoll/beam_elements/absorber.py +12 -2
  5. xcoll/beam_elements/base.py +162 -62
  6. xcoll/beam_elements/blowup.py +1 -0
  7. xcoll/beam_elements/elements_src/black_absorber.h +57 -58
  8. xcoll/beam_elements/elements_src/black_crystal.h +49 -50
  9. xcoll/beam_elements/elements_src/everest_block.h +21 -11
  10. xcoll/beam_elements/elements_src/everest_collimator.h +100 -91
  11. xcoll/beam_elements/elements_src/everest_crystal.h +145 -140
  12. xcoll/beam_elements/elements_src/transparent_collimator.h +126 -0
  13. xcoll/beam_elements/elements_src/transparent_crystal.h +118 -0
  14. xcoll/beam_elements/everest.py +16 -5
  15. xcoll/beam_elements/monitor.py +1 -0
  16. xcoll/beam_elements/transparent.py +83 -0
  17. xcoll/colldb.py +15 -6
  18. xcoll/general.py +1 -1
  19. xcoll/general.py.orig +20 -0
  20. xcoll/headers/particle_states.py +51 -0
  21. xcoll/initial_distribution.py +121 -91
  22. xcoll/initial_distribution.py.orig +256 -0
  23. xcoll/interaction_record/interaction_record.py +2 -1
  24. xcoll/interaction_record/interaction_types.py +2 -2
  25. xcoll/line_tools.py +163 -73
  26. xcoll/lossmap.py +519 -127
  27. xcoll/plot.py +109 -0
  28. xcoll/rf_sweep.py +6 -0
  29. xcoll/scattering_routines/engine.py +414 -217
  30. xcoll/scattering_routines/environment.py +297 -0
  31. xcoll/scattering_routines/everest/amorphous.h +95 -71
  32. xcoll/scattering_routines/everest/{channeling.h → channelling.h} +121 -112
  33. xcoll/scattering_routines/everest/constants.h +1 -1
  34. xcoll/scattering_routines/everest/crystal_parameters.h +9 -9
  35. xcoll/scattering_routines/everest/everest.h +8 -3
  36. xcoll/scattering_routines/everest/everest.py +2 -1
  37. xcoll/scattering_routines/everest/ionisation_loss.h +141 -0
  38. xcoll/scattering_routines/everest/jaw.h +19 -24
  39. xcoll/scattering_routines/everest/materials.py +2 -0
  40. xcoll/scattering_routines/everest/multiple_coulomb_scattering.h +2 -2
  41. xcoll/scattering_routines/everest/nuclear_interaction.h +35 -19
  42. xcoll/scattering_routines/everest/properties.h +3 -72
  43. xcoll/xaux.py +65 -109
  44. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/METADATA +5 -5
  45. xcoll-0.6.1.dist-info/RECORD +138 -0
  46. xcoll/_manager.py +0 -22
  47. xcoll/headers/particle_states.h +0 -25
  48. xcoll/install.py +0 -35
  49. xcoll/scattering_routines/geant4/collimasim/.git +0 -1
  50. xcoll/scattering_routines/geant4/collimasim/.gitignore +0 -12
  51. xcoll/scattering_routines/geant4/collimasim/.gitmodules +0 -3
  52. xcoll/scattering_routines/geant4/collimasim/CMakeLists.txt +0 -26
  53. xcoll/scattering_routines/geant4/collimasim/README.md +0 -21
  54. xcoll/scattering_routines/geant4/collimasim/docs/Makefile +0 -20
  55. xcoll/scattering_routines/geant4/collimasim/docs/make.bat +0 -35
  56. xcoll/scattering_routines/geant4/collimasim/docs/source/collimasim.rst +0 -10
  57. xcoll/scattering_routines/geant4/collimasim/docs/source/conf.py +0 -59
  58. xcoll/scattering_routines/geant4/collimasim/docs/source/index.rst +0 -26
  59. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.appveyor.yml +0 -37
  60. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-format +0 -19
  61. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-tidy +0 -65
  62. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.cmake-format.yaml +0 -73
  63. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.git +0 -1
  64. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CODEOWNERS +0 -9
  65. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CONTRIBUTING.md +0 -386
  66. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/bug-report.yml +0 -45
  67. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/config.yml +0 -8
  68. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/dependabot.yml +0 -16
  69. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler.yml +0 -8
  70. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler_merged.yml +0 -3
  71. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/pull_request_template.md +0 -19
  72. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/ci.yml +0 -969
  73. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/configure.yml +0 -84
  74. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/format.yml +0 -48
  75. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/labeler.yml +0 -16
  76. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/pip.yml +0 -103
  77. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.gitignore +0 -45
  78. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.pre-commit-config.yaml +0 -151
  79. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.readthedocs.yml +0 -3
  80. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/CMakeLists.txt +0 -297
  81. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/LICENSE +0 -29
  82. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/MANIFEST.in +0 -6
  83. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/README.rst +0 -180
  84. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Doxyfile +0 -23
  85. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Makefile +0 -192
  86. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/_static/theme_overrides.css +0 -11
  87. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/chrono.rst +0 -81
  88. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/custom.rst +0 -93
  89. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/eigen.rst +0 -310
  90. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/functional.rst +0 -109
  91. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/index.rst +0 -43
  92. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/overview.rst +0 -171
  93. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/stl.rst +0 -251
  94. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/strings.rst +0 -305
  95. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/classes.rst +0 -1297
  96. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/embedding.rst +0 -262
  97. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/exceptions.rst +0 -396
  98. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/functions.rst +0 -568
  99. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/misc.rst +0 -337
  100. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/index.rst +0 -13
  101. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/numpy.rst +0 -463
  102. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/object.rst +0 -286
  103. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/utilities.rst +0 -155
  104. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/smart_ptrs.rst +0 -174
  105. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/basics.rst +0 -308
  106. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.py +0 -91
  107. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.rst +0 -95
  108. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/changelog.rst +0 -2050
  109. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/classes.rst +0 -542
  110. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/cmake/index.rst +0 -8
  111. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/compiling.rst +0 -648
  112. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/conf.py +0 -381
  113. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/faq.rst +0 -343
  114. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/index.rst +0 -48
  115. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/installing.rst +0 -105
  116. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/limitations.rst +0 -72
  117. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11-logo.png +0 -0
  118. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.png +0 -0
  119. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.svg +0 -427
  120. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.png +0 -0
  121. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.svg +0 -427
  122. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/reference.rst +0 -130
  123. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/release.rst +0 -96
  124. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/requirements.txt +0 -8
  125. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/upgrade.rst +0 -548
  126. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/attr.h +0 -605
  127. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/buffer_info.h +0 -144
  128. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/cast.h +0 -1432
  129. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/chrono.h +0 -213
  130. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/common.h +0 -2
  131. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/complex.h +0 -65
  132. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/class.h +0 -709
  133. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/common.h +0 -1021
  134. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/descr.h +0 -104
  135. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/init.h +0 -346
  136. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/internals.h +0 -467
  137. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/type_caster_base.h +0 -978
  138. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/typeid.h +0 -55
  139. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eigen.h +0 -606
  140. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/embed.h +0 -284
  141. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eval.h +0 -163
  142. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/functional.h +0 -121
  143. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/gil.h +0 -193
  144. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/iostream.h +0 -275
  145. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/numpy.h +0 -1741
  146. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/operators.h +0 -163
  147. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/options.h +0 -65
  148. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pybind11.h +0 -2497
  149. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pytypes.h +0 -1879
  150. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl/filesystem.h +0 -103
  151. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl.h +0 -375
  152. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl_bind.h +0 -747
  153. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/noxfile.py +0 -88
  154. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__init__.py +0 -11
  155. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__main__.py +0 -52
  156. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.py +0 -12
  157. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.pyi +0 -6
  158. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/commands.py +0 -21
  159. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/py.typed +0 -0
  160. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.py +0 -482
  161. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.pyi +0 -63
  162. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pyproject.toml +0 -41
  163. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.cfg +0 -56
  164. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.py +0 -155
  165. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/CMakeLists.txt +0 -503
  166. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/conftest.py +0 -208
  167. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/constructor_stats.h +0 -275
  168. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/cross_module_gil_utils.cpp +0 -73
  169. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/env.py +0 -33
  170. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/pytest.ini +0 -0
  171. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/test_files.py +0 -279
  172. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/pytest.ini +0 -0
  173. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/test_setuphelper.py +0 -143
  174. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/local_bindings.h +0 -85
  175. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/object.h +0 -179
  176. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_cross_module_tests.cpp +0 -151
  177. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.cpp +0 -91
  178. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.h +0 -85
  179. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pytest.ini +0 -19
  180. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/requirements.txt +0 -12
  181. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.cpp +0 -26
  182. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.py +0 -25
  183. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.cpp +0 -216
  184. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.py +0 -163
  185. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.cpp +0 -286
  186. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.py +0 -536
  187. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.cpp +0 -107
  188. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.py +0 -248
  189. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.cpp +0 -227
  190. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.py +0 -202
  191. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.cpp +0 -84
  192. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.py +0 -210
  193. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.cpp +0 -550
  194. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.py +0 -473
  195. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/CMakeLists.txt +0 -84
  196. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/embed.cpp +0 -21
  197. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_embed/CMakeLists.txt +0 -28
  198. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_function/CMakeLists.txt +0 -39
  199. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_target/CMakeLists.txt +0 -46
  200. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/main.cpp +0 -6
  201. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_embed/CMakeLists.txt +0 -41
  202. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_function/CMakeLists.txt +0 -35
  203. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_target/CMakeLists.txt +0 -41
  204. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/test.py +0 -10
  205. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.cpp +0 -165
  206. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.py +0 -53
  207. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.cpp +0 -238
  208. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.py +0 -126
  209. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.cpp +0 -141
  210. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.py +0 -117
  211. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.cpp +0 -41
  212. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.py +0 -50
  213. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.cpp +0 -69
  214. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.py +0 -42
  215. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.cpp +0 -348
  216. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.py +0 -771
  217. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/CMakeLists.txt +0 -47
  218. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/catch.cpp +0 -22
  219. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/external_module.cpp +0 -23
  220. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.cpp +0 -326
  221. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.py +0 -15
  222. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.cpp +0 -148
  223. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.py +0 -272
  224. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.cpp +0 -119
  225. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.py +0 -51
  226. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval_call.py +0 -5
  227. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.cpp +0 -285
  228. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.h +0 -12
  229. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.py +0 -265
  230. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.cpp +0 -397
  231. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.py +0 -520
  232. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.cpp +0 -49
  233. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.py +0 -94
  234. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.cpp +0 -125
  235. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.py +0 -331
  236. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.cpp +0 -153
  237. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.py +0 -284
  238. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.cpp +0 -107
  239. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.py +0 -257
  240. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.cpp +0 -412
  241. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.py +0 -517
  242. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.cpp +0 -102
  243. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.py +0 -92
  244. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.cpp +0 -233
  245. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.py +0 -360
  246. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.cpp +0 -472
  247. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.py +0 -593
  248. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.cpp +0 -524
  249. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.py +0 -441
  250. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.cpp +0 -103
  251. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.py +0 -267
  252. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.cpp +0 -73
  253. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.py +0 -59
  254. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.cpp +0 -235
  255. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.py +0 -146
  256. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.cpp +0 -189
  257. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.py +0 -82
  258. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.cpp +0 -560
  259. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.py +0 -651
  260. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.cpp +0 -500
  261. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.py +0 -253
  262. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.cpp +0 -452
  263. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.py +0 -318
  264. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.cpp +0 -342
  265. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.py +0 -291
  266. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.cpp +0 -131
  267. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.py +0 -318
  268. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.cpp +0 -144
  269. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.py +0 -29
  270. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.cpp +0 -66
  271. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.py +0 -44
  272. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.cpp +0 -22
  273. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.py +0 -9
  274. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.cpp +0 -510
  275. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.py +0 -408
  276. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/valgrind-numpy-scipy.supp +0 -140
  277. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/valgrind-python.supp +0 -117
  278. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindCatch.cmake +0 -70
  279. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindEigen3.cmake +0 -86
  280. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindPythonLibsNew.cmake +0 -257
  281. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/check-style.sh +0 -44
  282. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/cmake_uninstall.cmake.in +0 -23
  283. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/libsize.py +0 -39
  284. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/make_changelog.py +0 -64
  285. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Common.cmake +0 -402
  286. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Config.cmake.in +0 -233
  287. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11NewTools.cmake +0 -276
  288. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Tools.cmake +0 -214
  289. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pyproject.toml +0 -3
  290. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_global.py.in +0 -65
  291. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_main.py.in +0 -41
  292. xcoll/scattering_routines/geant4/collimasim/pyproject.toml +0 -8
  293. xcoll/scattering_routines/geant4/collimasim/setup.py +0 -144
  294. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.cpp +0 -403
  295. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.hh +0 -100
  296. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.cpp +0 -763
  297. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.hh +0 -118
  298. xcoll/scattering_routines/geant4/collimasim/src/collimasim/__init__.py +0 -8
  299. xcoll/scattering_routines/geant4/collimasim/src/collimasim/bindings.cpp +0 -63
  300. xcoll/scattering_routines/geant4/collimasim/src/collimasim/pyCollimatorPass.py +0 -142
  301. xcoll/scattering_routines/geant4/collimasim/src/collimasim/xtrack_collimator.py +0 -556
  302. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/PKG-INFO +0 -6
  303. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/SOURCES.txt +0 -24
  304. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/dependency_links.txt +0 -1
  305. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/not-zip-safe +0 -1
  306. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/top_level.txt +0 -1
  307. xcoll/scattering_routines/geant4/collimasim/tests/README.md +0 -25
  308. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_forions.dat +0 -25
  309. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_new_example.dat +0 -18
  310. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_old_example.dat +0 -68
  311. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_testing.dat +0 -15
  312. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_yaml_example.yaml +0 -110
  313. xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps.dat +0 -7
  314. xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps_pyat_test.dat +0 -3
  315. xcoll/scattering_routines/geant4/collimasim/tests/resources/collonly_twiss_file_example.tfs +0 -54
  316. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings.gmad +0 -3
  317. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_black_absorber.gmad +0 -3
  318. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_ions.gmad +0 -5
  319. xcoll/scattering_routines/geant4/collimasim/tests/resources/twiss_file_testing.tfs +0 -51
  320. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat.py +0 -65
  321. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_passmethod.py +0 -59
  322. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_tracking.py +0 -102
  323. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack.py +0 -75
  324. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_angle.py +0 -74
  325. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_colldb_load.py +0 -84
  326. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction.py +0 -159
  327. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction_ion.py +0 -99
  328. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_ions.py +0 -78
  329. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_lost_energy.py +0 -88
  330. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tilt.py +0 -80
  331. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking.py +0 -97
  332. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking_ions.py +0 -96
  333. xcoll-0.5.12.dist-info/RECORD +0 -415
  334. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/LICENSE +0 -0
  335. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/NOTICE +0 -0
  336. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/WHEEL +0 -0
@@ -1,253 +0,0 @@
1
- # -*- coding: utf-8 -*-
2
- import pytest
3
-
4
- from pybind11_tests import ConstructorStats
5
- from pybind11_tests import sequences_and_iterators as m
6
-
7
-
8
- def isclose(a, b, rel_tol=1e-05, abs_tol=0.0):
9
- """Like math.isclose() from Python 3.5"""
10
- return abs(a - b) <= max(rel_tol * max(abs(a), abs(b)), abs_tol)
11
-
12
-
13
- def allclose(a_list, b_list, rel_tol=1e-05, abs_tol=0.0):
14
- return all(
15
- isclose(a, b, rel_tol=rel_tol, abs_tol=abs_tol) for a, b in zip(a_list, b_list)
16
- )
17
-
18
-
19
- def test_slice_constructors():
20
- assert m.make_forward_slice_size_t() == slice(0, -1, 1)
21
- assert m.make_reversed_slice_object() == slice(None, None, -1)
22
-
23
-
24
- @pytest.mark.skipif(not m.has_optional, reason="no <optional>")
25
- def test_slice_constructors_explicit_optional():
26
- assert m.make_reversed_slice_size_t_optional() == slice(None, None, -1)
27
- assert m.make_reversed_slice_size_t_optional_verbose() == slice(None, None, -1)
28
-
29
-
30
- def test_generalized_iterators():
31
- assert list(m.IntPairs([(1, 2), (3, 4), (0, 5)]).nonzero()) == [(1, 2), (3, 4)]
32
- assert list(m.IntPairs([(1, 2), (2, 0), (0, 3), (4, 5)]).nonzero()) == [(1, 2)]
33
- assert list(m.IntPairs([(0, 3), (1, 2), (3, 4)]).nonzero()) == []
34
-
35
- assert list(m.IntPairs([(1, 2), (3, 4), (0, 5)]).nonzero_keys()) == [1, 3]
36
- assert list(m.IntPairs([(1, 2), (2, 0), (0, 3), (4, 5)]).nonzero_keys()) == [1]
37
- assert list(m.IntPairs([(0, 3), (1, 2), (3, 4)]).nonzero_keys()) == []
38
-
39
- assert list(m.IntPairs([(1, 2), (3, 4), (0, 5)]).nonzero_values()) == [2, 4]
40
- assert list(m.IntPairs([(1, 2), (2, 0), (0, 3), (4, 5)]).nonzero_values()) == [2]
41
- assert list(m.IntPairs([(0, 3), (1, 2), (3, 4)]).nonzero_values()) == []
42
-
43
- # __next__ must continue to raise StopIteration
44
- it = m.IntPairs([(0, 0)]).nonzero()
45
- for _ in range(3):
46
- with pytest.raises(StopIteration):
47
- next(it)
48
-
49
- it = m.IntPairs([(0, 0)]).nonzero_keys()
50
- for _ in range(3):
51
- with pytest.raises(StopIteration):
52
- next(it)
53
-
54
-
55
- def test_nonref_iterators():
56
- pairs = m.IntPairs([(1, 2), (3, 4), (0, 5)])
57
- assert list(pairs.nonref()) == [(1, 2), (3, 4), (0, 5)]
58
- assert list(pairs.nonref_keys()) == [1, 3, 0]
59
- assert list(pairs.nonref_values()) == [2, 4, 5]
60
-
61
-
62
- def test_generalized_iterators_simple():
63
- assert list(m.IntPairs([(1, 2), (3, 4), (0, 5)]).simple_iterator()) == [
64
- (1, 2),
65
- (3, 4),
66
- (0, 5),
67
- ]
68
- assert list(m.IntPairs([(1, 2), (3, 4), (0, 5)]).simple_keys()) == [1, 3, 0]
69
- assert list(m.IntPairs([(1, 2), (3, 4), (0, 5)]).simple_values()) == [2, 4, 5]
70
-
71
-
72
- def test_iterator_referencing():
73
- """Test that iterators reference rather than copy their referents."""
74
- vec = m.VectorNonCopyableInt()
75
- vec.append(3)
76
- vec.append(5)
77
- assert [int(x) for x in vec] == [3, 5]
78
- # Increment everything to make sure the referents can be mutated
79
- for x in vec:
80
- x.set(int(x) + 1)
81
- assert [int(x) for x in vec] == [4, 6]
82
-
83
- vec = m.VectorNonCopyableIntPair()
84
- vec.append([3, 4])
85
- vec.append([5, 7])
86
- assert [int(x) for x in vec.keys()] == [3, 5]
87
- assert [int(x) for x in vec.values()] == [4, 7]
88
- for x in vec.keys():
89
- x.set(int(x) + 1)
90
- for x in vec.values():
91
- x.set(int(x) + 10)
92
- assert [int(x) for x in vec.keys()] == [4, 6]
93
- assert [int(x) for x in vec.values()] == [14, 17]
94
-
95
-
96
- def test_sliceable():
97
- sliceable = m.Sliceable(100)
98
- assert sliceable[::] == (0, 100, 1)
99
- assert sliceable[10::] == (10, 100, 1)
100
- assert sliceable[:10:] == (0, 10, 1)
101
- assert sliceable[::10] == (0, 100, 10)
102
- assert sliceable[-10::] == (90, 100, 1)
103
- assert sliceable[:-10:] == (0, 90, 1)
104
- assert sliceable[::-10] == (99, -1, -10)
105
- assert sliceable[50:60:1] == (50, 60, 1)
106
- assert sliceable[50:60:-1] == (50, 60, -1)
107
-
108
-
109
- def test_sequence():
110
- cstats = ConstructorStats.get(m.Sequence)
111
-
112
- s = m.Sequence(5)
113
- assert cstats.values() == ["of size", "5"]
114
-
115
- assert "Sequence" in repr(s)
116
- assert len(s) == 5
117
- assert s[0] == 0 and s[3] == 0
118
- assert 12.34 not in s
119
- s[0], s[3] = 12.34, 56.78
120
- assert 12.34 in s
121
- assert isclose(s[0], 12.34) and isclose(s[3], 56.78)
122
-
123
- rev = reversed(s)
124
- assert cstats.values() == ["of size", "5"]
125
-
126
- rev2 = s[::-1]
127
- assert cstats.values() == ["of size", "5"]
128
-
129
- it = iter(m.Sequence(0))
130
- for _ in range(3): # __next__ must continue to raise StopIteration
131
- with pytest.raises(StopIteration):
132
- next(it)
133
- assert cstats.values() == ["of size", "0"]
134
-
135
- expected = [0, 56.78, 0, 0, 12.34]
136
- assert allclose(rev, expected)
137
- assert allclose(rev2, expected)
138
- assert rev == rev2
139
-
140
- rev[0::2] = m.Sequence([2.0, 2.0, 2.0])
141
- assert cstats.values() == ["of size", "3", "from std::vector"]
142
-
143
- assert allclose(rev, [2, 56.78, 2, 0, 2])
144
-
145
- assert cstats.alive() == 4
146
- del it
147
- assert cstats.alive() == 3
148
- del s
149
- assert cstats.alive() == 2
150
- del rev
151
- assert cstats.alive() == 1
152
- del rev2
153
- assert cstats.alive() == 0
154
-
155
- assert cstats.values() == []
156
- assert cstats.default_constructions == 0
157
- assert cstats.copy_constructions == 0
158
- assert cstats.move_constructions >= 1
159
- assert cstats.copy_assignments == 0
160
- assert cstats.move_assignments == 0
161
-
162
-
163
- def test_sequence_length():
164
- """#2076: Exception raised by len(arg) should be propagated"""
165
-
166
- class BadLen(RuntimeError):
167
- pass
168
-
169
- class SequenceLike:
170
- def __getitem__(self, i):
171
- return None
172
-
173
- def __len__(self):
174
- raise BadLen()
175
-
176
- with pytest.raises(BadLen):
177
- m.sequence_length(SequenceLike())
178
-
179
- assert m.sequence_length([1, 2, 3]) == 3
180
- assert m.sequence_length("hello") == 5
181
-
182
-
183
- def test_map_iterator():
184
- sm = m.StringMap({"hi": "bye", "black": "white"})
185
- assert sm["hi"] == "bye"
186
- assert len(sm) == 2
187
- assert sm["black"] == "white"
188
-
189
- with pytest.raises(KeyError):
190
- assert sm["orange"]
191
- sm["orange"] = "banana"
192
- assert sm["orange"] == "banana"
193
-
194
- expected = {"hi": "bye", "black": "white", "orange": "banana"}
195
- for k in sm:
196
- assert sm[k] == expected[k]
197
- for k, v in sm.items():
198
- assert v == expected[k]
199
- assert list(sm.values()) == [expected[k] for k in sm]
200
-
201
- it = iter(m.StringMap({}))
202
- for _ in range(3): # __next__ must continue to raise StopIteration
203
- with pytest.raises(StopIteration):
204
- next(it)
205
-
206
-
207
- def test_python_iterator_in_cpp():
208
- t = (1, 2, 3)
209
- assert m.object_to_list(t) == [1, 2, 3]
210
- assert m.object_to_list(iter(t)) == [1, 2, 3]
211
- assert m.iterator_to_list(iter(t)) == [1, 2, 3]
212
-
213
- with pytest.raises(TypeError) as excinfo:
214
- m.object_to_list(1)
215
- assert "object is not iterable" in str(excinfo.value)
216
-
217
- with pytest.raises(TypeError) as excinfo:
218
- m.iterator_to_list(1)
219
- assert "incompatible function arguments" in str(excinfo.value)
220
-
221
- def bad_next_call():
222
- raise RuntimeError("py::iterator::advance() should propagate errors")
223
-
224
- with pytest.raises(RuntimeError) as excinfo:
225
- m.iterator_to_list(iter(bad_next_call, None))
226
- assert str(excinfo.value) == "py::iterator::advance() should propagate errors"
227
-
228
- lst = [1, None, 0, None]
229
- assert m.count_none(lst) == 2
230
- assert m.find_none(lst) is True
231
- assert m.count_nonzeros({"a": 0, "b": 1, "c": 2}) == 2
232
-
233
- r = range(5)
234
- assert all(m.tuple_iterator(tuple(r)))
235
- assert all(m.list_iterator(list(r)))
236
- assert all(m.sequence_iterator(r))
237
-
238
-
239
- def test_iterator_passthrough():
240
- """#181: iterator passthrough did not compile"""
241
- from pybind11_tests.sequences_and_iterators import iterator_passthrough
242
-
243
- values = [3, 5, 7, 9, 11, 13, 15]
244
- assert list(iterator_passthrough(iter(values))) == values
245
-
246
-
247
- def test_iterator_rvp():
248
- """#388: Can't make iterators via make_iterator() with different r/v policies"""
249
- import pybind11_tests.sequences_and_iterators as m
250
-
251
- assert list(m.make_iterator_1()) == [1, 2, 3]
252
- assert list(m.make_iterator_2()) == [1, 2, 3]
253
- assert not isinstance(m.make_iterator_1(), type(m.make_iterator_2()))