xcoll 0.5.12__py3-none-any.whl → 0.6.1__py3-none-any.whl

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Files changed (336) hide show
  1. xcoll/__init__.py +5 -18
  2. xcoll/__init__.py.orig +26 -0
  3. xcoll/beam_elements/__init__.py +1 -0
  4. xcoll/beam_elements/absorber.py +12 -2
  5. xcoll/beam_elements/base.py +162 -62
  6. xcoll/beam_elements/blowup.py +1 -0
  7. xcoll/beam_elements/elements_src/black_absorber.h +57 -58
  8. xcoll/beam_elements/elements_src/black_crystal.h +49 -50
  9. xcoll/beam_elements/elements_src/everest_block.h +21 -11
  10. xcoll/beam_elements/elements_src/everest_collimator.h +100 -91
  11. xcoll/beam_elements/elements_src/everest_crystal.h +145 -140
  12. xcoll/beam_elements/elements_src/transparent_collimator.h +126 -0
  13. xcoll/beam_elements/elements_src/transparent_crystal.h +118 -0
  14. xcoll/beam_elements/everest.py +16 -5
  15. xcoll/beam_elements/monitor.py +1 -0
  16. xcoll/beam_elements/transparent.py +83 -0
  17. xcoll/colldb.py +15 -6
  18. xcoll/general.py +1 -1
  19. xcoll/general.py.orig +20 -0
  20. xcoll/headers/particle_states.py +51 -0
  21. xcoll/initial_distribution.py +121 -91
  22. xcoll/initial_distribution.py.orig +256 -0
  23. xcoll/interaction_record/interaction_record.py +2 -1
  24. xcoll/interaction_record/interaction_types.py +2 -2
  25. xcoll/line_tools.py +163 -73
  26. xcoll/lossmap.py +519 -127
  27. xcoll/plot.py +109 -0
  28. xcoll/rf_sweep.py +6 -0
  29. xcoll/scattering_routines/engine.py +414 -217
  30. xcoll/scattering_routines/environment.py +297 -0
  31. xcoll/scattering_routines/everest/amorphous.h +95 -71
  32. xcoll/scattering_routines/everest/{channeling.h → channelling.h} +121 -112
  33. xcoll/scattering_routines/everest/constants.h +1 -1
  34. xcoll/scattering_routines/everest/crystal_parameters.h +9 -9
  35. xcoll/scattering_routines/everest/everest.h +8 -3
  36. xcoll/scattering_routines/everest/everest.py +2 -1
  37. xcoll/scattering_routines/everest/ionisation_loss.h +141 -0
  38. xcoll/scattering_routines/everest/jaw.h +19 -24
  39. xcoll/scattering_routines/everest/materials.py +2 -0
  40. xcoll/scattering_routines/everest/multiple_coulomb_scattering.h +2 -2
  41. xcoll/scattering_routines/everest/nuclear_interaction.h +35 -19
  42. xcoll/scattering_routines/everest/properties.h +3 -72
  43. xcoll/xaux.py +65 -109
  44. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/METADATA +5 -5
  45. xcoll-0.6.1.dist-info/RECORD +138 -0
  46. xcoll/_manager.py +0 -22
  47. xcoll/headers/particle_states.h +0 -25
  48. xcoll/install.py +0 -35
  49. xcoll/scattering_routines/geant4/collimasim/.git +0 -1
  50. xcoll/scattering_routines/geant4/collimasim/.gitignore +0 -12
  51. xcoll/scattering_routines/geant4/collimasim/.gitmodules +0 -3
  52. xcoll/scattering_routines/geant4/collimasim/CMakeLists.txt +0 -26
  53. xcoll/scattering_routines/geant4/collimasim/README.md +0 -21
  54. xcoll/scattering_routines/geant4/collimasim/docs/Makefile +0 -20
  55. xcoll/scattering_routines/geant4/collimasim/docs/make.bat +0 -35
  56. xcoll/scattering_routines/geant4/collimasim/docs/source/collimasim.rst +0 -10
  57. xcoll/scattering_routines/geant4/collimasim/docs/source/conf.py +0 -59
  58. xcoll/scattering_routines/geant4/collimasim/docs/source/index.rst +0 -26
  59. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.appveyor.yml +0 -37
  60. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-format +0 -19
  61. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-tidy +0 -65
  62. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.cmake-format.yaml +0 -73
  63. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.git +0 -1
  64. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CODEOWNERS +0 -9
  65. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CONTRIBUTING.md +0 -386
  66. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/bug-report.yml +0 -45
  67. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/config.yml +0 -8
  68. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/dependabot.yml +0 -16
  69. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler.yml +0 -8
  70. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler_merged.yml +0 -3
  71. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/pull_request_template.md +0 -19
  72. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/ci.yml +0 -969
  73. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/configure.yml +0 -84
  74. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/format.yml +0 -48
  75. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/labeler.yml +0 -16
  76. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/pip.yml +0 -103
  77. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.gitignore +0 -45
  78. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.pre-commit-config.yaml +0 -151
  79. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.readthedocs.yml +0 -3
  80. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/CMakeLists.txt +0 -297
  81. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/LICENSE +0 -29
  82. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/MANIFEST.in +0 -6
  83. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/README.rst +0 -180
  84. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Doxyfile +0 -23
  85. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Makefile +0 -192
  86. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/_static/theme_overrides.css +0 -11
  87. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/chrono.rst +0 -81
  88. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/custom.rst +0 -93
  89. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/eigen.rst +0 -310
  90. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/functional.rst +0 -109
  91. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/index.rst +0 -43
  92. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/overview.rst +0 -171
  93. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/stl.rst +0 -251
  94. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/strings.rst +0 -305
  95. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/classes.rst +0 -1297
  96. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/embedding.rst +0 -262
  97. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/exceptions.rst +0 -396
  98. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/functions.rst +0 -568
  99. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/misc.rst +0 -337
  100. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/index.rst +0 -13
  101. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/numpy.rst +0 -463
  102. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/object.rst +0 -286
  103. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/utilities.rst +0 -155
  104. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/smart_ptrs.rst +0 -174
  105. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/basics.rst +0 -308
  106. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.py +0 -91
  107. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.rst +0 -95
  108. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/changelog.rst +0 -2050
  109. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/classes.rst +0 -542
  110. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/cmake/index.rst +0 -8
  111. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/compiling.rst +0 -648
  112. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/conf.py +0 -381
  113. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/faq.rst +0 -343
  114. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/index.rst +0 -48
  115. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/installing.rst +0 -105
  116. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/limitations.rst +0 -72
  117. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11-logo.png +0 -0
  118. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.png +0 -0
  119. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.svg +0 -427
  120. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.png +0 -0
  121. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.svg +0 -427
  122. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/reference.rst +0 -130
  123. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/release.rst +0 -96
  124. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/requirements.txt +0 -8
  125. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/upgrade.rst +0 -548
  126. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/attr.h +0 -605
  127. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/buffer_info.h +0 -144
  128. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/cast.h +0 -1432
  129. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/chrono.h +0 -213
  130. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/common.h +0 -2
  131. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/complex.h +0 -65
  132. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/class.h +0 -709
  133. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/common.h +0 -1021
  134. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/descr.h +0 -104
  135. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/init.h +0 -346
  136. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/internals.h +0 -467
  137. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/type_caster_base.h +0 -978
  138. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/typeid.h +0 -55
  139. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eigen.h +0 -606
  140. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/embed.h +0 -284
  141. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eval.h +0 -163
  142. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/functional.h +0 -121
  143. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/gil.h +0 -193
  144. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/iostream.h +0 -275
  145. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/numpy.h +0 -1741
  146. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/operators.h +0 -163
  147. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/options.h +0 -65
  148. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pybind11.h +0 -2497
  149. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pytypes.h +0 -1879
  150. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl/filesystem.h +0 -103
  151. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl.h +0 -375
  152. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl_bind.h +0 -747
  153. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/noxfile.py +0 -88
  154. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__init__.py +0 -11
  155. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__main__.py +0 -52
  156. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.py +0 -12
  157. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.pyi +0 -6
  158. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/commands.py +0 -21
  159. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/py.typed +0 -0
  160. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.py +0 -482
  161. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.pyi +0 -63
  162. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pyproject.toml +0 -41
  163. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.cfg +0 -56
  164. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.py +0 -155
  165. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/CMakeLists.txt +0 -503
  166. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/conftest.py +0 -208
  167. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/constructor_stats.h +0 -275
  168. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/cross_module_gil_utils.cpp +0 -73
  169. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/env.py +0 -33
  170. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/pytest.ini +0 -0
  171. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/test_files.py +0 -279
  172. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/pytest.ini +0 -0
  173. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/test_setuphelper.py +0 -143
  174. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/local_bindings.h +0 -85
  175. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/object.h +0 -179
  176. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_cross_module_tests.cpp +0 -151
  177. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.cpp +0 -91
  178. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.h +0 -85
  179. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pytest.ini +0 -19
  180. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/requirements.txt +0 -12
  181. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.cpp +0 -26
  182. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.py +0 -25
  183. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.cpp +0 -216
  184. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.py +0 -163
  185. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.cpp +0 -286
  186. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.py +0 -536
  187. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.cpp +0 -107
  188. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.py +0 -248
  189. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.cpp +0 -227
  190. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.py +0 -202
  191. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.cpp +0 -84
  192. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.py +0 -210
  193. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.cpp +0 -550
  194. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.py +0 -473
  195. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/CMakeLists.txt +0 -84
  196. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/embed.cpp +0 -21
  197. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_embed/CMakeLists.txt +0 -28
  198. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_function/CMakeLists.txt +0 -39
  199. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_target/CMakeLists.txt +0 -46
  200. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/main.cpp +0 -6
  201. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_embed/CMakeLists.txt +0 -41
  202. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_function/CMakeLists.txt +0 -35
  203. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_target/CMakeLists.txt +0 -41
  204. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/test.py +0 -10
  205. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.cpp +0 -165
  206. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.py +0 -53
  207. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.cpp +0 -238
  208. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.py +0 -126
  209. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.cpp +0 -141
  210. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.py +0 -117
  211. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.cpp +0 -41
  212. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.py +0 -50
  213. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.cpp +0 -69
  214. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.py +0 -42
  215. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.cpp +0 -348
  216. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.py +0 -771
  217. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/CMakeLists.txt +0 -47
  218. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/catch.cpp +0 -22
  219. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/external_module.cpp +0 -23
  220. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.cpp +0 -326
  221. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.py +0 -15
  222. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.cpp +0 -148
  223. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.py +0 -272
  224. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.cpp +0 -119
  225. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.py +0 -51
  226. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval_call.py +0 -5
  227. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.cpp +0 -285
  228. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.h +0 -12
  229. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.py +0 -265
  230. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.cpp +0 -397
  231. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.py +0 -520
  232. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.cpp +0 -49
  233. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.py +0 -94
  234. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.cpp +0 -125
  235. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.py +0 -331
  236. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.cpp +0 -153
  237. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.py +0 -284
  238. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.cpp +0 -107
  239. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.py +0 -257
  240. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.cpp +0 -412
  241. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.py +0 -517
  242. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.cpp +0 -102
  243. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.py +0 -92
  244. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.cpp +0 -233
  245. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.py +0 -360
  246. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.cpp +0 -472
  247. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.py +0 -593
  248. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.cpp +0 -524
  249. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.py +0 -441
  250. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.cpp +0 -103
  251. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.py +0 -267
  252. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.cpp +0 -73
  253. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.py +0 -59
  254. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.cpp +0 -235
  255. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.py +0 -146
  256. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.cpp +0 -189
  257. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.py +0 -82
  258. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.cpp +0 -560
  259. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.py +0 -651
  260. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.cpp +0 -500
  261. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.py +0 -253
  262. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.cpp +0 -452
  263. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.py +0 -318
  264. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.cpp +0 -342
  265. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.py +0 -291
  266. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.cpp +0 -131
  267. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.py +0 -318
  268. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.cpp +0 -144
  269. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.py +0 -29
  270. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.cpp +0 -66
  271. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.py +0 -44
  272. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.cpp +0 -22
  273. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.py +0 -9
  274. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.cpp +0 -510
  275. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.py +0 -408
  276. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/valgrind-numpy-scipy.supp +0 -140
  277. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/valgrind-python.supp +0 -117
  278. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindCatch.cmake +0 -70
  279. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindEigen3.cmake +0 -86
  280. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindPythonLibsNew.cmake +0 -257
  281. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/check-style.sh +0 -44
  282. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/cmake_uninstall.cmake.in +0 -23
  283. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/libsize.py +0 -39
  284. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/make_changelog.py +0 -64
  285. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Common.cmake +0 -402
  286. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Config.cmake.in +0 -233
  287. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11NewTools.cmake +0 -276
  288. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Tools.cmake +0 -214
  289. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pyproject.toml +0 -3
  290. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_global.py.in +0 -65
  291. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_main.py.in +0 -41
  292. xcoll/scattering_routines/geant4/collimasim/pyproject.toml +0 -8
  293. xcoll/scattering_routines/geant4/collimasim/setup.py +0 -144
  294. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.cpp +0 -403
  295. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.hh +0 -100
  296. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.cpp +0 -763
  297. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.hh +0 -118
  298. xcoll/scattering_routines/geant4/collimasim/src/collimasim/__init__.py +0 -8
  299. xcoll/scattering_routines/geant4/collimasim/src/collimasim/bindings.cpp +0 -63
  300. xcoll/scattering_routines/geant4/collimasim/src/collimasim/pyCollimatorPass.py +0 -142
  301. xcoll/scattering_routines/geant4/collimasim/src/collimasim/xtrack_collimator.py +0 -556
  302. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/PKG-INFO +0 -6
  303. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/SOURCES.txt +0 -24
  304. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/dependency_links.txt +0 -1
  305. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/not-zip-safe +0 -1
  306. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/top_level.txt +0 -1
  307. xcoll/scattering_routines/geant4/collimasim/tests/README.md +0 -25
  308. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_forions.dat +0 -25
  309. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_new_example.dat +0 -18
  310. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_old_example.dat +0 -68
  311. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_testing.dat +0 -15
  312. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_yaml_example.yaml +0 -110
  313. xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps.dat +0 -7
  314. xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps_pyat_test.dat +0 -3
  315. xcoll/scattering_routines/geant4/collimasim/tests/resources/collonly_twiss_file_example.tfs +0 -54
  316. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings.gmad +0 -3
  317. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_black_absorber.gmad +0 -3
  318. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_ions.gmad +0 -5
  319. xcoll/scattering_routines/geant4/collimasim/tests/resources/twiss_file_testing.tfs +0 -51
  320. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat.py +0 -65
  321. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_passmethod.py +0 -59
  322. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_tracking.py +0 -102
  323. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack.py +0 -75
  324. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_angle.py +0 -74
  325. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_colldb_load.py +0 -84
  326. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction.py +0 -159
  327. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction_ion.py +0 -99
  328. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_ions.py +0 -78
  329. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_lost_energy.py +0 -88
  330. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tilt.py +0 -80
  331. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking.py +0 -97
  332. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking_ions.py +0 -96
  333. xcoll-0.5.12.dist-info/RECORD +0 -415
  334. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/LICENSE +0 -0
  335. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/NOTICE +0 -0
  336. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/WHEEL +0 -0
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- .. warning::
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- Please be advised that the reference documentation discussing pybind11
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- Reference
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- #########
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- Macros
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- ======
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- .. doxygendefine:: PYBIND11_MODULE
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- ==============================================
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-
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- With reference counting
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- :members:
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-
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- .. doxygenfunction:: reinterpret_borrow
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-
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- .. doxygenfunction:: reinterpret_steal
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-
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- Convenience classes for specific Python types
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- =============================================
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-
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- .. doxygenclass:: module_
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- :members:
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-
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- .. doxygengroup:: pytypes
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- :members:
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-
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- Convenience functions converting to Python types
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- ================================================
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-
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- .. doxygenfunction:: make_tuple(Args&&...)
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-
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- .. doxygenfunction:: make_iterator(Iterator, Sentinel, Extra &&...)
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- .. doxygenfunction:: make_iterator(Type &, Extra&&...)
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- .. doxygenfunction:: make_key_iterator(Iterator, Sentinel, Extra &&...)
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- .. doxygenfunction:: make_key_iterator(Type &, Extra&&...)
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- .. _extras:
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-
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- Passing extra arguments to ``def`` or ``class_``
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- ================================================
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- .. doxygengroup:: annotations
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- :members:
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- Embedding the interpreter
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- =========================
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- Redirecting C++ streams
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- =======================
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- Python built-in functions
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- =========================
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-
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- :members:
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- Inheritance
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- ===========
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- .. doxygendefine:: PYBIND11_OVERRIDE_PURE_NAME
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-
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- Exceptions
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- ==========
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- :members:
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- .. doxygenclass:: builtin_exception
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- ========
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- On version numbers
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- The two version numbers (C++ and Python) must match when combined (checked when
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- you build the PyPI package), and must be a valid `PEP 440
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- <https://www.python.org/dev/peps/pep-0440>`_ version when combined.
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- the version just below.
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- - Run ``nox -s tests_packaging``` to ensure this was done correctly.
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- - Ensure that all the information in ``setup.cfg`` is up-to-date, like
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- - Check to make sure
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- issues are entered in the changelog (clear the label when done).
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- - ``git add`` and ``git commit``, ``git push``. **Ensure CI passes**. (If it
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- fails due to a known flake issue, either ignore or restart CI.)
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- - Add a release branch if this is a new minor version, or update the existing release branch if it is a patch version
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- - New branch: ``git checkout -b vX.Y``, ``git push -u origin vX.Y``
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- - Update branch: ``git checkout vX.Y``, ``git merge <release branch>``, ``git push``
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- - Update tags (optional; if you skip this, the GitHub release makes a
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- non-annotated tag for you)
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- - ``git tag -a vX.Y.Z -m 'vX.Y.Z release'``.
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- - ``git push --tags``.
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- - Update stable
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- - ``git checkout stable``
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- - ``git merge master``
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- - ``git push``
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- - Make a GitHub release (this shows up in the UI, sends new release
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- notifications to users watching releases, and also uploads PyPI packages).
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- (Note: if you do not use an existing tag, this creates a new lightweight tag
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- for you, so you could skip the above step).
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- - GUI method: click "Create a new release" on the far right, fill in the tag
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- name (if you didn't tag above, it will be made here), fill in a release
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- name like "Version X.Y.Z", and optionally copy-and-paste the changelog into
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- the description (processed as markdown by Pandoc). Check "pre-release" if
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- this is a beta/RC. You can get partway there with
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- ``cat docs/changelog.rst | pandoc -f rst -t gfm``.
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- - CLI method: with ``gh`` installed, run ``gh release create vX.Y.Z -t "Version X.Y.Z"``
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- If this is a pre-release, add ``-p``.
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-
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- - Get back to work
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- - Make sure you are on master, not somewhere else: ``git checkout master``
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- - Update version macros in ``include/pybind11/detail/common.h`` (set PATCH to
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- ``0.dev1`` and increment MINOR).
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- - Update ``_version.py`` to match
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- - Run ``nox -s tests_packaging``` to ensure this was done correctly.
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- - Add a spot for in-development updates in ``docs/changelog.rst``.
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- - ``git add``, ``git commit``, ``git push``
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-
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- If a version branch is updated, remember to set PATCH to ``1.dev1``.
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-
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- If you'd like to bump homebrew, run:
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- .. code-block::
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- Conda-forge should automatically make a PR in a few hours, and automatically
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- merge it if there are no issues.
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-
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-
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- Manual packaging
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- ^^^^^^^^^^^^^^^^
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-
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- If you need to manually upload releases, you can download the releases from the job artifacts and upload them with twine. You can also make the files locally (not recommended in general, as your local directory is more likely to be "dirty" and SDists love picking up random unrelated/hidden files); this is the procedure:
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-
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- python3 -m build
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- twine upload dist/*
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- breathe==4.26.1
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- # https://github.com/sphinx-doc/sphinx/issues/9001
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- docutils==0.16
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- sphinx==3.3.1
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- sphinx_rtd_theme==0.5.0
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- sphinxcontrib-moderncmakedomain==3.17
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- sphinxcontrib-svg2pdfconverter==1.1.0