xcoll 0.5.12__py3-none-any.whl → 0.6.1__py3-none-any.whl

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Files changed (336) hide show
  1. xcoll/__init__.py +5 -18
  2. xcoll/__init__.py.orig +26 -0
  3. xcoll/beam_elements/__init__.py +1 -0
  4. xcoll/beam_elements/absorber.py +12 -2
  5. xcoll/beam_elements/base.py +162 -62
  6. xcoll/beam_elements/blowup.py +1 -0
  7. xcoll/beam_elements/elements_src/black_absorber.h +57 -58
  8. xcoll/beam_elements/elements_src/black_crystal.h +49 -50
  9. xcoll/beam_elements/elements_src/everest_block.h +21 -11
  10. xcoll/beam_elements/elements_src/everest_collimator.h +100 -91
  11. xcoll/beam_elements/elements_src/everest_crystal.h +145 -140
  12. xcoll/beam_elements/elements_src/transparent_collimator.h +126 -0
  13. xcoll/beam_elements/elements_src/transparent_crystal.h +118 -0
  14. xcoll/beam_elements/everest.py +16 -5
  15. xcoll/beam_elements/monitor.py +1 -0
  16. xcoll/beam_elements/transparent.py +83 -0
  17. xcoll/colldb.py +15 -6
  18. xcoll/general.py +1 -1
  19. xcoll/general.py.orig +20 -0
  20. xcoll/headers/particle_states.py +51 -0
  21. xcoll/initial_distribution.py +121 -91
  22. xcoll/initial_distribution.py.orig +256 -0
  23. xcoll/interaction_record/interaction_record.py +2 -1
  24. xcoll/interaction_record/interaction_types.py +2 -2
  25. xcoll/line_tools.py +163 -73
  26. xcoll/lossmap.py +519 -127
  27. xcoll/plot.py +109 -0
  28. xcoll/rf_sweep.py +6 -0
  29. xcoll/scattering_routines/engine.py +414 -217
  30. xcoll/scattering_routines/environment.py +297 -0
  31. xcoll/scattering_routines/everest/amorphous.h +95 -71
  32. xcoll/scattering_routines/everest/{channeling.h → channelling.h} +121 -112
  33. xcoll/scattering_routines/everest/constants.h +1 -1
  34. xcoll/scattering_routines/everest/crystal_parameters.h +9 -9
  35. xcoll/scattering_routines/everest/everest.h +8 -3
  36. xcoll/scattering_routines/everest/everest.py +2 -1
  37. xcoll/scattering_routines/everest/ionisation_loss.h +141 -0
  38. xcoll/scattering_routines/everest/jaw.h +19 -24
  39. xcoll/scattering_routines/everest/materials.py +2 -0
  40. xcoll/scattering_routines/everest/multiple_coulomb_scattering.h +2 -2
  41. xcoll/scattering_routines/everest/nuclear_interaction.h +35 -19
  42. xcoll/scattering_routines/everest/properties.h +3 -72
  43. xcoll/xaux.py +65 -109
  44. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/METADATA +5 -5
  45. xcoll-0.6.1.dist-info/RECORD +138 -0
  46. xcoll/_manager.py +0 -22
  47. xcoll/headers/particle_states.h +0 -25
  48. xcoll/install.py +0 -35
  49. xcoll/scattering_routines/geant4/collimasim/.git +0 -1
  50. xcoll/scattering_routines/geant4/collimasim/.gitignore +0 -12
  51. xcoll/scattering_routines/geant4/collimasim/.gitmodules +0 -3
  52. xcoll/scattering_routines/geant4/collimasim/CMakeLists.txt +0 -26
  53. xcoll/scattering_routines/geant4/collimasim/README.md +0 -21
  54. xcoll/scattering_routines/geant4/collimasim/docs/Makefile +0 -20
  55. xcoll/scattering_routines/geant4/collimasim/docs/make.bat +0 -35
  56. xcoll/scattering_routines/geant4/collimasim/docs/source/collimasim.rst +0 -10
  57. xcoll/scattering_routines/geant4/collimasim/docs/source/conf.py +0 -59
  58. xcoll/scattering_routines/geant4/collimasim/docs/source/index.rst +0 -26
  59. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.appveyor.yml +0 -37
  60. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-format +0 -19
  61. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-tidy +0 -65
  62. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.cmake-format.yaml +0 -73
  63. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.git +0 -1
  64. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CODEOWNERS +0 -9
  65. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CONTRIBUTING.md +0 -386
  66. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/bug-report.yml +0 -45
  67. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/config.yml +0 -8
  68. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/dependabot.yml +0 -16
  69. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler.yml +0 -8
  70. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler_merged.yml +0 -3
  71. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/pull_request_template.md +0 -19
  72. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/ci.yml +0 -969
  73. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/configure.yml +0 -84
  74. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/format.yml +0 -48
  75. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/labeler.yml +0 -16
  76. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/pip.yml +0 -103
  77. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.gitignore +0 -45
  78. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.pre-commit-config.yaml +0 -151
  79. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.readthedocs.yml +0 -3
  80. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/CMakeLists.txt +0 -297
  81. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/LICENSE +0 -29
  82. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/MANIFEST.in +0 -6
  83. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/README.rst +0 -180
  84. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Doxyfile +0 -23
  85. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Makefile +0 -192
  86. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/_static/theme_overrides.css +0 -11
  87. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/chrono.rst +0 -81
  88. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/custom.rst +0 -93
  89. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/eigen.rst +0 -310
  90. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/functional.rst +0 -109
  91. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/index.rst +0 -43
  92. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/overview.rst +0 -171
  93. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/stl.rst +0 -251
  94. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/strings.rst +0 -305
  95. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/classes.rst +0 -1297
  96. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/embedding.rst +0 -262
  97. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/exceptions.rst +0 -396
  98. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/functions.rst +0 -568
  99. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/misc.rst +0 -337
  100. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/index.rst +0 -13
  101. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/numpy.rst +0 -463
  102. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/object.rst +0 -286
  103. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/utilities.rst +0 -155
  104. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/smart_ptrs.rst +0 -174
  105. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/basics.rst +0 -308
  106. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.py +0 -91
  107. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.rst +0 -95
  108. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/changelog.rst +0 -2050
  109. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/classes.rst +0 -542
  110. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/cmake/index.rst +0 -8
  111. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/compiling.rst +0 -648
  112. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/conf.py +0 -381
  113. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/faq.rst +0 -343
  114. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/index.rst +0 -48
  115. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/installing.rst +0 -105
  116. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/limitations.rst +0 -72
  117. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11-logo.png +0 -0
  118. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.png +0 -0
  119. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.svg +0 -427
  120. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.png +0 -0
  121. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.svg +0 -427
  122. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/reference.rst +0 -130
  123. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/release.rst +0 -96
  124. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/requirements.txt +0 -8
  125. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/upgrade.rst +0 -548
  126. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/attr.h +0 -605
  127. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/buffer_info.h +0 -144
  128. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/cast.h +0 -1432
  129. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/chrono.h +0 -213
  130. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/common.h +0 -2
  131. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/complex.h +0 -65
  132. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/class.h +0 -709
  133. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/common.h +0 -1021
  134. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/descr.h +0 -104
  135. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/init.h +0 -346
  136. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/internals.h +0 -467
  137. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/type_caster_base.h +0 -978
  138. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/typeid.h +0 -55
  139. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eigen.h +0 -606
  140. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/embed.h +0 -284
  141. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eval.h +0 -163
  142. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/functional.h +0 -121
  143. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/gil.h +0 -193
  144. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/iostream.h +0 -275
  145. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/numpy.h +0 -1741
  146. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/operators.h +0 -163
  147. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/options.h +0 -65
  148. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pybind11.h +0 -2497
  149. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pytypes.h +0 -1879
  150. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl/filesystem.h +0 -103
  151. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl.h +0 -375
  152. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl_bind.h +0 -747
  153. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/noxfile.py +0 -88
  154. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__init__.py +0 -11
  155. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__main__.py +0 -52
  156. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.py +0 -12
  157. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.pyi +0 -6
  158. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/commands.py +0 -21
  159. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/py.typed +0 -0
  160. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.py +0 -482
  161. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.pyi +0 -63
  162. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pyproject.toml +0 -41
  163. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.cfg +0 -56
  164. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.py +0 -155
  165. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/CMakeLists.txt +0 -503
  166. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/conftest.py +0 -208
  167. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/constructor_stats.h +0 -275
  168. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/cross_module_gil_utils.cpp +0 -73
  169. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/env.py +0 -33
  170. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/pytest.ini +0 -0
  171. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/test_files.py +0 -279
  172. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/pytest.ini +0 -0
  173. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/test_setuphelper.py +0 -143
  174. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/local_bindings.h +0 -85
  175. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/object.h +0 -179
  176. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_cross_module_tests.cpp +0 -151
  177. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.cpp +0 -91
  178. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.h +0 -85
  179. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pytest.ini +0 -19
  180. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/requirements.txt +0 -12
  181. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.cpp +0 -26
  182. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.py +0 -25
  183. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.cpp +0 -216
  184. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.py +0 -163
  185. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.cpp +0 -286
  186. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.py +0 -536
  187. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.cpp +0 -107
  188. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.py +0 -248
  189. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.cpp +0 -227
  190. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.py +0 -202
  191. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.cpp +0 -84
  192. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.py +0 -210
  193. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.cpp +0 -550
  194. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.py +0 -473
  195. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/CMakeLists.txt +0 -84
  196. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/embed.cpp +0 -21
  197. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_embed/CMakeLists.txt +0 -28
  198. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_function/CMakeLists.txt +0 -39
  199. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_target/CMakeLists.txt +0 -46
  200. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/main.cpp +0 -6
  201. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_embed/CMakeLists.txt +0 -41
  202. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_function/CMakeLists.txt +0 -35
  203. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_target/CMakeLists.txt +0 -41
  204. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/test.py +0 -10
  205. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.cpp +0 -165
  206. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.py +0 -53
  207. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.cpp +0 -238
  208. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.py +0 -126
  209. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.cpp +0 -141
  210. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.py +0 -117
  211. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.cpp +0 -41
  212. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.py +0 -50
  213. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.cpp +0 -69
  214. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.py +0 -42
  215. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.cpp +0 -348
  216. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.py +0 -771
  217. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/CMakeLists.txt +0 -47
  218. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/catch.cpp +0 -22
  219. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/external_module.cpp +0 -23
  220. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.cpp +0 -326
  221. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.py +0 -15
  222. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.cpp +0 -148
  223. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.py +0 -272
  224. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.cpp +0 -119
  225. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.py +0 -51
  226. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval_call.py +0 -5
  227. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.cpp +0 -285
  228. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.h +0 -12
  229. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.py +0 -265
  230. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.cpp +0 -397
  231. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.py +0 -520
  232. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.cpp +0 -49
  233. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.py +0 -94
  234. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.cpp +0 -125
  235. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.py +0 -331
  236. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.cpp +0 -153
  237. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.py +0 -284
  238. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.cpp +0 -107
  239. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.py +0 -257
  240. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.cpp +0 -412
  241. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.py +0 -517
  242. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.cpp +0 -102
  243. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.py +0 -92
  244. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.cpp +0 -233
  245. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.py +0 -360
  246. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.cpp +0 -472
  247. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.py +0 -593
  248. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.cpp +0 -524
  249. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.py +0 -441
  250. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.cpp +0 -103
  251. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.py +0 -267
  252. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.cpp +0 -73
  253. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.py +0 -59
  254. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.cpp +0 -235
  255. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.py +0 -146
  256. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.cpp +0 -189
  257. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.py +0 -82
  258. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.cpp +0 -560
  259. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.py +0 -651
  260. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.cpp +0 -500
  261. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.py +0 -253
  262. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.cpp +0 -452
  263. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.py +0 -318
  264. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.cpp +0 -342
  265. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.py +0 -291
  266. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.cpp +0 -131
  267. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.py +0 -318
  268. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.cpp +0 -144
  269. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.py +0 -29
  270. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.cpp +0 -66
  271. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.py +0 -44
  272. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.cpp +0 -22
  273. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.py +0 -9
  274. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.cpp +0 -510
  275. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.py +0 -408
  276. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/valgrind-numpy-scipy.supp +0 -140
  277. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/valgrind-python.supp +0 -117
  278. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindCatch.cmake +0 -70
  279. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindEigen3.cmake +0 -86
  280. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindPythonLibsNew.cmake +0 -257
  281. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/check-style.sh +0 -44
  282. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/cmake_uninstall.cmake.in +0 -23
  283. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/libsize.py +0 -39
  284. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/make_changelog.py +0 -64
  285. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Common.cmake +0 -402
  286. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Config.cmake.in +0 -233
  287. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11NewTools.cmake +0 -276
  288. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Tools.cmake +0 -214
  289. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pyproject.toml +0 -3
  290. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_global.py.in +0 -65
  291. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_main.py.in +0 -41
  292. xcoll/scattering_routines/geant4/collimasim/pyproject.toml +0 -8
  293. xcoll/scattering_routines/geant4/collimasim/setup.py +0 -144
  294. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.cpp +0 -403
  295. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.hh +0 -100
  296. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.cpp +0 -763
  297. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.hh +0 -118
  298. xcoll/scattering_routines/geant4/collimasim/src/collimasim/__init__.py +0 -8
  299. xcoll/scattering_routines/geant4/collimasim/src/collimasim/bindings.cpp +0 -63
  300. xcoll/scattering_routines/geant4/collimasim/src/collimasim/pyCollimatorPass.py +0 -142
  301. xcoll/scattering_routines/geant4/collimasim/src/collimasim/xtrack_collimator.py +0 -556
  302. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/PKG-INFO +0 -6
  303. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/SOURCES.txt +0 -24
  304. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/dependency_links.txt +0 -1
  305. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/not-zip-safe +0 -1
  306. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/top_level.txt +0 -1
  307. xcoll/scattering_routines/geant4/collimasim/tests/README.md +0 -25
  308. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_forions.dat +0 -25
  309. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_new_example.dat +0 -18
  310. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_old_example.dat +0 -68
  311. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_testing.dat +0 -15
  312. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_yaml_example.yaml +0 -110
  313. xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps.dat +0 -7
  314. xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps_pyat_test.dat +0 -3
  315. xcoll/scattering_routines/geant4/collimasim/tests/resources/collonly_twiss_file_example.tfs +0 -54
  316. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings.gmad +0 -3
  317. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_black_absorber.gmad +0 -3
  318. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_ions.gmad +0 -5
  319. xcoll/scattering_routines/geant4/collimasim/tests/resources/twiss_file_testing.tfs +0 -51
  320. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat.py +0 -65
  321. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_passmethod.py +0 -59
  322. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_tracking.py +0 -102
  323. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack.py +0 -75
  324. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_angle.py +0 -74
  325. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_colldb_load.py +0 -84
  326. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction.py +0 -159
  327. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction_ion.py +0 -99
  328. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_ions.py +0 -78
  329. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_lost_energy.py +0 -88
  330. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tilt.py +0 -80
  331. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking.py +0 -97
  332. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking_ions.py +0 -96
  333. xcoll-0.5.12.dist-info/RECORD +0 -415
  334. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/LICENSE +0 -0
  335. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/NOTICE +0 -0
  336. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/WHEEL +0 -0
@@ -1,524 +0,0 @@
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- /*
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- tests/test_numpy_dtypes.cpp -- Structured and compound NumPy dtypes
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-
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- Copyright (c) 2016 Ivan Smirnov
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-
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- All rights reserved. Use of this source code is governed by a
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- BSD-style license that can be found in the LICENSE file.
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- */
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-
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- #include "pybind11_tests.h"
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- #include <pybind11/numpy.h>
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-
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- #ifdef __GNUC__
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- #define PYBIND11_PACKED(cls) cls __attribute__((__packed__))
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- #else
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- #define PYBIND11_PACKED(cls) __pragma(pack(push, 1)) cls __pragma(pack(pop))
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- #endif
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-
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- namespace py = pybind11;
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-
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- struct SimpleStruct {
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- bool bool_;
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- uint32_t uint_;
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- float float_;
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- long double ldbl_;
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- };
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-
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- std::ostream& operator<<(std::ostream& os, const SimpleStruct& v) {
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- return os << "s:" << v.bool_ << "," << v.uint_ << "," << v.float_ << "," << v.ldbl_;
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- }
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-
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- struct SimpleStructReordered {
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- bool bool_;
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- float float_;
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- uint32_t uint_;
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- long double ldbl_;
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- };
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-
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- PYBIND11_PACKED(struct PackedStruct {
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- bool bool_;
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- uint32_t uint_;
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- float float_;
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- long double ldbl_;
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- });
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-
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- std::ostream& operator<<(std::ostream& os, const PackedStruct& v) {
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- return os << "p:" << v.bool_ << "," << v.uint_ << "," << v.float_ << "," << v.ldbl_;
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- }
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-
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- PYBIND11_PACKED(struct NestedStruct {
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- SimpleStruct a;
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- PackedStruct b;
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- });
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-
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- std::ostream& operator<<(std::ostream& os, const NestedStruct& v) {
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- return os << "n:a=" << v.a << ";b=" << v.b;
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- }
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-
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- struct PartialStruct {
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- bool bool_;
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- uint32_t uint_;
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- float float_;
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- uint64_t dummy2;
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- long double ldbl_;
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- };
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-
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- struct PartialNestedStruct {
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- uint64_t dummy1;
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- PartialStruct a;
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- uint64_t dummy2;
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- };
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-
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- struct UnboundStruct { };
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-
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- struct StringStruct {
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- char a[3];
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- std::array<char, 3> b;
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- };
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-
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- struct ComplexStruct {
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- std::complex<float> cflt;
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- std::complex<double> cdbl;
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- };
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-
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- std::ostream& operator<<(std::ostream& os, const ComplexStruct& v) {
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- return os << "c:" << v.cflt << "," << v.cdbl;
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- }
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-
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- struct ArrayStruct {
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- char a[3][4];
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- int32_t b[2];
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- std::array<uint8_t, 3> c;
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- std::array<float, 2> d[4];
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- };
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-
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- PYBIND11_PACKED(struct StructWithUglyNames {
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- int8_t __x__;
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- uint64_t __y__;
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- });
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-
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- enum class E1 : int64_t { A = -1, B = 1 };
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- enum E2 : uint8_t { X = 1, Y = 2 };
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-
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- PYBIND11_PACKED(struct EnumStruct {
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- E1 e1;
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- E2 e2;
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- });
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-
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- std::ostream& operator<<(std::ostream& os, const StringStruct& v) {
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- os << "a='";
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- for (size_t i = 0; i < 3 && (v.a[i] != 0); i++)
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- os << v.a[i];
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- os << "',b='";
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- for (size_t i = 0; i < 3 && (v.b[i] != 0); i++)
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- os << v.b[i];
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- return os << "'";
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- }
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-
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- std::ostream& operator<<(std::ostream& os, const ArrayStruct& v) {
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- os << "a={";
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- for (int i = 0; i < 3; i++) {
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- if (i > 0)
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- os << ',';
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- os << '{';
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- for (int j = 0; j < 3; j++)
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- os << v.a[i][j] << ',';
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- os << v.a[i][3] << '}';
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- }
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- os << "},b={" << v.b[0] << ',' << v.b[1];
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- os << "},c={" << int(v.c[0]) << ',' << int(v.c[1]) << ',' << int(v.c[2]);
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- os << "},d={";
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- for (int i = 0; i < 4; i++) {
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- if (i > 0)
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- os << ',';
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- os << '{' << v.d[i][0] << ',' << v.d[i][1] << '}';
136
- }
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- return os << '}';
138
- }
139
-
140
- std::ostream& operator<<(std::ostream& os, const EnumStruct& v) {
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- return os << "e1=" << (v.e1 == E1::A ? "A" : "B") << ",e2=" << (v.e2 == E2::X ? "X" : "Y");
142
- }
143
-
144
- template <typename T>
145
- py::array mkarray_via_buffer(size_t n) {
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- return py::array(py::buffer_info(nullptr, sizeof(T),
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- py::format_descriptor<T>::format(),
148
- 1, { n }, { sizeof(T) }));
149
- }
150
-
151
- #define SET_TEST_VALS(s, i) \
152
- do { \
153
- (s).bool_ = (i) % 2 != 0; \
154
- (s).uint_ = (uint32_t) (i); \
155
- (s).float_ = (float) (i) *1.5f; \
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- (s).ldbl_ = (long double) (i) * -2.5L; \
157
- } while (0)
158
-
159
- template <typename S>
160
- py::array_t<S, 0> create_recarray(size_t n) {
161
- auto arr = mkarray_via_buffer<S>(n);
162
- auto req = arr.request();
163
- auto ptr = static_cast<S*>(req.ptr);
164
- for (size_t i = 0; i < n; i++) {
165
- SET_TEST_VALS(ptr[i], i);
166
- }
167
- return arr;
168
- }
169
-
170
- template <typename S>
171
- py::list print_recarray(py::array_t<S, 0> arr) {
172
- const auto req = arr.request();
173
- const auto ptr = static_cast<S*>(req.ptr);
174
- auto l = py::list();
175
- for (py::ssize_t i = 0; i < req.size; i++) {
176
- std::stringstream ss;
177
- ss << ptr[i];
178
- l.append(py::str(ss.str()));
179
- }
180
- return l;
181
- }
182
-
183
- py::array_t<int32_t, 0> test_array_ctors(int i) {
184
- using arr_t = py::array_t<int32_t, 0>;
185
-
186
- std::vector<int32_t> data { 1, 2, 3, 4, 5, 6 };
187
- std::vector<py::ssize_t> shape { 3, 2 };
188
- std::vector<py::ssize_t> strides { 8, 4 };
189
-
190
- auto ptr = data.data();
191
- auto vptr = (void *) ptr;
192
- auto dtype = py::dtype("int32");
193
-
194
- py::buffer_info buf_ndim1(vptr, 4, "i", 6);
195
- py::buffer_info buf_ndim1_null(nullptr, 4, "i", 6);
196
- py::buffer_info buf_ndim2(vptr, 4, "i", 2, shape, strides);
197
- py::buffer_info buf_ndim2_null(nullptr, 4, "i", 2, shape, strides);
198
-
199
- auto fill = [](py::array arr) {
200
- auto req = arr.request();
201
- for (int i = 0; i < 6; i++) ((int32_t *) req.ptr)[i] = i + 1;
202
- return arr;
203
- };
204
-
205
- switch (i) {
206
- // shape: (3, 2)
207
- case 10: return arr_t(shape, strides, ptr);
208
- case 11: return py::array(shape, strides, ptr);
209
- case 12: return py::array(dtype, shape, strides, vptr);
210
- case 13: return arr_t(shape, ptr);
211
- case 14: return py::array(shape, ptr);
212
- case 15: return py::array(dtype, shape, vptr);
213
- case 16: return arr_t(buf_ndim2);
214
- case 17: return py::array(buf_ndim2);
215
- // shape: (3, 2) - post-fill
216
- case 20: return fill(arr_t(shape, strides));
217
- case 21: return py::array(shape, strides, ptr); // can't have nullptr due to templated ctor
218
- case 22: return fill(py::array(dtype, shape, strides));
219
- case 23: return fill(arr_t(shape));
220
- case 24: return py::array(shape, ptr); // can't have nullptr due to templated ctor
221
- case 25: return fill(py::array(dtype, shape));
222
- case 26: return fill(arr_t(buf_ndim2_null));
223
- case 27: return fill(py::array(buf_ndim2_null));
224
- // shape: (6, )
225
- case 30: return arr_t(6, ptr);
226
- case 31: return py::array(6, ptr);
227
- case 32: return py::array(dtype, 6, vptr);
228
- case 33: return arr_t(buf_ndim1);
229
- case 34: return py::array(buf_ndim1);
230
- // shape: (6, )
231
- case 40: return fill(arr_t(6));
232
- case 41: return py::array(6, ptr); // can't have nullptr due to templated ctor
233
- case 42: return fill(py::array(dtype, 6));
234
- case 43: return fill(arr_t(buf_ndim1_null));
235
- case 44: return fill(py::array(buf_ndim1_null));
236
- }
237
- return arr_t();
238
- }
239
-
240
- py::list test_dtype_ctors() {
241
- py::list list;
242
- list.append(py::dtype("int32"));
243
- list.append(py::dtype(std::string("float64")));
244
- list.append(py::dtype::from_args(py::str("bool")));
245
- py::list names, offsets, formats;
246
- py::dict dict;
247
- names.append(py::str("a")); names.append(py::str("b")); dict["names"] = names;
248
- offsets.append(py::int_(1)); offsets.append(py::int_(10)); dict["offsets"] = offsets;
249
- formats.append(py::dtype("int32")); formats.append(py::dtype("float64")); dict["formats"] = formats;
250
- dict["itemsize"] = py::int_(20);
251
- list.append(py::dtype::from_args(dict));
252
- list.append(py::dtype(names, formats, offsets, 20));
253
- list.append(py::dtype(py::buffer_info((void *) 0, sizeof(unsigned int), "I", 1)));
254
- list.append(py::dtype(py::buffer_info((void *) 0, 0, "T{i:a:f:b:}", 1)));
255
- return list;
256
- }
257
-
258
- struct A {};
259
- struct B {};
260
-
261
- TEST_SUBMODULE(numpy_dtypes, m) {
262
- try { py::module_::import("numpy"); }
263
- catch (...) { return; }
264
-
265
- // typeinfo may be registered before the dtype descriptor for scalar casts to work...
266
- py::class_<SimpleStruct>(m, "SimpleStruct")
267
- // Explicit construct to ensure zero-valued initialization.
268
- .def(py::init([]() { return SimpleStruct(); }))
269
- .def_readwrite("bool_", &SimpleStruct::bool_)
270
- .def_readwrite("uint_", &SimpleStruct::uint_)
271
- .def_readwrite("float_", &SimpleStruct::float_)
272
- .def_readwrite("ldbl_", &SimpleStruct::ldbl_)
273
- .def("astuple",
274
- [](const SimpleStruct &self) {
275
- return py::make_tuple(self.bool_, self.uint_, self.float_, self.ldbl_);
276
- })
277
- .def_static("fromtuple", [](const py::tuple &tup) {
278
- if (py::len(tup) != 4) {
279
- throw py::cast_error("Invalid size");
280
- }
281
- return SimpleStruct{
282
- tup[0].cast<bool>(),
283
- tup[1].cast<uint32_t>(),
284
- tup[2].cast<float>(),
285
- tup[3].cast<long double>()};
286
- });
287
-
288
- PYBIND11_NUMPY_DTYPE(SimpleStruct, bool_, uint_, float_, ldbl_);
289
- PYBIND11_NUMPY_DTYPE(SimpleStructReordered, bool_, uint_, float_, ldbl_);
290
- PYBIND11_NUMPY_DTYPE(PackedStruct, bool_, uint_, float_, ldbl_);
291
- PYBIND11_NUMPY_DTYPE(NestedStruct, a, b);
292
- PYBIND11_NUMPY_DTYPE(PartialStruct, bool_, uint_, float_, ldbl_);
293
- PYBIND11_NUMPY_DTYPE(PartialNestedStruct, a);
294
- PYBIND11_NUMPY_DTYPE(StringStruct, a, b);
295
- PYBIND11_NUMPY_DTYPE(ArrayStruct, a, b, c, d);
296
- PYBIND11_NUMPY_DTYPE(EnumStruct, e1, e2);
297
- PYBIND11_NUMPY_DTYPE(ComplexStruct, cflt, cdbl);
298
-
299
- // ... or after
300
- py::class_<PackedStruct>(m, "PackedStruct");
301
-
302
- PYBIND11_NUMPY_DTYPE_EX(StructWithUglyNames, __x__, "x", __y__, "y");
303
-
304
- // If uncommented, this should produce a static_assert failure telling the user that the struct
305
- // is not a POD type
306
- // struct NotPOD { std::string v; NotPOD() : v("hi") {}; };
307
- // PYBIND11_NUMPY_DTYPE(NotPOD, v);
308
-
309
- // Check that dtypes can be registered programmatically, both from
310
- // initializer lists of field descriptors and from other containers.
311
- py::detail::npy_format_descriptor<A>::register_dtype(
312
- {}
313
- );
314
- py::detail::npy_format_descriptor<B>::register_dtype(
315
- std::vector<py::detail::field_descriptor>{}
316
- );
317
-
318
- // test_recarray, test_scalar_conversion
319
- m.def("create_rec_simple", &create_recarray<SimpleStruct>);
320
- m.def("create_rec_packed", &create_recarray<PackedStruct>);
321
- m.def("create_rec_nested", [](size_t n) { // test_signature
322
- py::array_t<NestedStruct, 0> arr = mkarray_via_buffer<NestedStruct>(n);
323
- auto req = arr.request();
324
- auto ptr = static_cast<NestedStruct*>(req.ptr);
325
- for (size_t i = 0; i < n; i++) {
326
- SET_TEST_VALS(ptr[i].a, i);
327
- SET_TEST_VALS(ptr[i].b, i + 1);
328
- }
329
- return arr;
330
- });
331
- m.def("create_rec_partial", &create_recarray<PartialStruct>);
332
- m.def("create_rec_partial_nested", [](size_t n) {
333
- py::array_t<PartialNestedStruct, 0> arr = mkarray_via_buffer<PartialNestedStruct>(n);
334
- auto req = arr.request();
335
- auto ptr = static_cast<PartialNestedStruct*>(req.ptr);
336
- for (size_t i = 0; i < n; i++) {
337
- SET_TEST_VALS(ptr[i].a, i);
338
- }
339
- return arr;
340
- });
341
- m.def("print_rec_simple", &print_recarray<SimpleStruct>);
342
- m.def("print_rec_packed", &print_recarray<PackedStruct>);
343
- m.def("print_rec_nested", &print_recarray<NestedStruct>);
344
-
345
- // test_format_descriptors
346
- m.def("get_format_unbound", []() { return py::format_descriptor<UnboundStruct>::format(); });
347
- m.def("print_format_descriptors", []() {
348
- py::list l;
349
- for (const auto &fmt : {
350
- py::format_descriptor<SimpleStruct>::format(),
351
- py::format_descriptor<PackedStruct>::format(),
352
- py::format_descriptor<NestedStruct>::format(),
353
- py::format_descriptor<PartialStruct>::format(),
354
- py::format_descriptor<PartialNestedStruct>::format(),
355
- py::format_descriptor<StringStruct>::format(),
356
- py::format_descriptor<ArrayStruct>::format(),
357
- py::format_descriptor<EnumStruct>::format(),
358
- py::format_descriptor<ComplexStruct>::format()
359
- }) {
360
- l.append(py::cast(fmt));
361
- }
362
- return l;
363
- });
364
-
365
- // test_dtype
366
- std::vector<const char *> dtype_names{
367
- "byte", "short", "intc", "int_", "longlong",
368
- "ubyte", "ushort", "uintc", "uint", "ulonglong",
369
- "half", "single", "double", "longdouble",
370
- "csingle", "cdouble", "clongdouble",
371
- "bool_", "datetime64", "timedelta64", "object_"
372
- };
373
-
374
- m.def("print_dtypes", []() {
375
- py::list l;
376
- for (const py::handle &d : {
377
- py::dtype::of<SimpleStruct>(),
378
- py::dtype::of<PackedStruct>(),
379
- py::dtype::of<NestedStruct>(),
380
- py::dtype::of<PartialStruct>(),
381
- py::dtype::of<PartialNestedStruct>(),
382
- py::dtype::of<StringStruct>(),
383
- py::dtype::of<ArrayStruct>(),
384
- py::dtype::of<EnumStruct>(),
385
- py::dtype::of<StructWithUglyNames>(),
386
- py::dtype::of<ComplexStruct>()
387
- })
388
- l.append(py::str(d));
389
- return l;
390
- });
391
- m.def("test_dtype_ctors", &test_dtype_ctors);
392
- m.def("test_dtype_kind", [dtype_names]() {
393
- py::list list;
394
- for (auto& dt_name : dtype_names)
395
- list.append(py::dtype(dt_name).kind());
396
- return list;
397
- });
398
- m.def("test_dtype_char_", [dtype_names]() {
399
- py::list list;
400
- for (auto& dt_name : dtype_names)
401
- list.append(py::dtype(dt_name).char_());
402
- return list;
403
- });
404
- m.def("test_dtype_methods", []() {
405
- py::list list;
406
- auto dt1 = py::dtype::of<int32_t>();
407
- auto dt2 = py::dtype::of<SimpleStruct>();
408
- list.append(dt1); list.append(dt2);
409
- list.append(py::bool_(dt1.has_fields())); list.append(py::bool_(dt2.has_fields()));
410
- list.append(py::int_(dt1.itemsize())); list.append(py::int_(dt2.itemsize()));
411
- return list;
412
- });
413
- struct TrailingPaddingStruct {
414
- int32_t a;
415
- char b;
416
- };
417
- PYBIND11_NUMPY_DTYPE(TrailingPaddingStruct, a, b);
418
- m.def("trailing_padding_dtype", []() { return py::dtype::of<TrailingPaddingStruct>(); });
419
-
420
- // test_string_array
421
- m.def("create_string_array", [](bool non_empty) {
422
- py::array_t<StringStruct, 0> arr = mkarray_via_buffer<StringStruct>(non_empty ? 4 : 0);
423
- if (non_empty) {
424
- auto req = arr.request();
425
- auto ptr = static_cast<StringStruct*>(req.ptr);
426
- for (py::ssize_t i = 0; i < req.size * req.itemsize; i++)
427
- static_cast<char*>(req.ptr)[i] = 0;
428
- ptr[1].a[0] = 'a'; ptr[1].b[0] = 'a';
429
- ptr[2].a[0] = 'a'; ptr[2].b[0] = 'a';
430
- ptr[3].a[0] = 'a'; ptr[3].b[0] = 'a';
431
-
432
- ptr[2].a[1] = 'b'; ptr[2].b[1] = 'b';
433
- ptr[3].a[1] = 'b'; ptr[3].b[1] = 'b';
434
-
435
- ptr[3].a[2] = 'c'; ptr[3].b[2] = 'c';
436
- }
437
- return arr;
438
- });
439
- m.def("print_string_array", &print_recarray<StringStruct>);
440
-
441
- // test_array_array
442
- m.def("create_array_array", [](size_t n) {
443
- py::array_t<ArrayStruct, 0> arr = mkarray_via_buffer<ArrayStruct>(n);
444
- auto ptr = (ArrayStruct *) arr.mutable_data();
445
- for (size_t i = 0; i < n; i++) {
446
- for (size_t j = 0; j < 3; j++)
447
- for (size_t k = 0; k < 4; k++)
448
- ptr[i].a[j][k] = char('A' + (i * 100 + j * 10 + k) % 26);
449
- for (size_t j = 0; j < 2; j++)
450
- ptr[i].b[j] = int32_t(i * 1000 + j);
451
- for (size_t j = 0; j < 3; j++)
452
- ptr[i].c[j] = uint8_t(i * 10 + j);
453
- for (size_t j = 0; j < 4; j++)
454
- for (size_t k = 0; k < 2; k++)
455
- ptr[i].d[j][k] = float(i) * 100.0f + float(j) * 10.0f + float(k);
456
- }
457
- return arr;
458
- });
459
- m.def("print_array_array", &print_recarray<ArrayStruct>);
460
-
461
- // test_enum_array
462
- m.def("create_enum_array", [](size_t n) {
463
- py::array_t<EnumStruct, 0> arr = mkarray_via_buffer<EnumStruct>(n);
464
- auto ptr = (EnumStruct *) arr.mutable_data();
465
- for (size_t i = 0; i < n; i++) {
466
- ptr[i].e1 = static_cast<E1>(-1 + ((int) i % 2) * 2);
467
- ptr[i].e2 = static_cast<E2>(1 + (i % 2));
468
- }
469
- return arr;
470
- });
471
- m.def("print_enum_array", &print_recarray<EnumStruct>);
472
-
473
- // test_complex_array
474
- m.def("create_complex_array", [](size_t n) {
475
- py::array_t<ComplexStruct, 0> arr = mkarray_via_buffer<ComplexStruct>(n);
476
- auto ptr = (ComplexStruct *) arr.mutable_data();
477
- for (size_t i = 0; i < n; i++) {
478
- ptr[i].cflt.real(float(i));
479
- ptr[i].cflt.imag(float(i) + 0.25f);
480
- ptr[i].cdbl.real(double(i) + 0.5);
481
- ptr[i].cdbl.imag(double(i) + 0.75);
482
- }
483
- return arr;
484
- });
485
- m.def("print_complex_array", &print_recarray<ComplexStruct>);
486
-
487
- // test_array_constructors
488
- m.def("test_array_ctors", &test_array_ctors);
489
-
490
- // test_compare_buffer_info
491
- struct CompareStruct {
492
- bool x;
493
- uint32_t y;
494
- float z;
495
- };
496
- PYBIND11_NUMPY_DTYPE(CompareStruct, x, y, z);
497
- m.def("compare_buffer_info", []() {
498
- py::list list;
499
- list.append(py::bool_(py::detail::compare_buffer_info<float>::compare(py::buffer_info(nullptr, sizeof(float), "f", 1))));
500
- list.append(py::bool_(py::detail::compare_buffer_info<unsigned>::compare(py::buffer_info(nullptr, sizeof(int), "I", 1))));
501
- list.append(py::bool_(py::detail::compare_buffer_info<long>::compare(py::buffer_info(nullptr, sizeof(long), "l", 1))));
502
- list.append(py::bool_(py::detail::compare_buffer_info<long>::compare(py::buffer_info(nullptr, sizeof(long), sizeof(long) == sizeof(int) ? "i" : "q", 1))));
503
- list.append(py::bool_(py::detail::compare_buffer_info<CompareStruct>::compare(py::buffer_info(nullptr, sizeof(CompareStruct), "T{?:x:3xI:y:f:z:}", 1))));
504
- return list;
505
- });
506
- m.def("buffer_to_dtype", [](py::buffer& buf) { return py::dtype(buf.request()); });
507
-
508
- // test_scalar_conversion
509
- auto f_simple = [](SimpleStruct s) { return s.uint_ * 10; };
510
- m.def("f_simple", f_simple);
511
- m.def("f_packed", [](PackedStruct s) { return s.uint_ * 10; });
512
- m.def("f_nested", [](NestedStruct s) { return s.a.uint_ * 10; });
513
-
514
- // test_vectorize
515
- m.def("f_simple_vectorized", py::vectorize(f_simple));
516
- auto f_simple_pass_thru = [](SimpleStruct s) { return s; };
517
- m.def("f_simple_pass_thru_vectorized", py::vectorize(f_simple_pass_thru));
518
-
519
- // test_register_dtype
520
- m.def("register_dtype", []() { PYBIND11_NUMPY_DTYPE(SimpleStruct, bool_, uint_, float_, ldbl_); });
521
-
522
- // test_str_leak
523
- m.def("dtype_wrapper", [](py::object d) { return py::dtype::from_args(std::move(d)); });
524
- }