xcoll 0.5.12__py3-none-any.whl → 0.6.1__py3-none-any.whl

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Files changed (336) hide show
  1. xcoll/__init__.py +5 -18
  2. xcoll/__init__.py.orig +26 -0
  3. xcoll/beam_elements/__init__.py +1 -0
  4. xcoll/beam_elements/absorber.py +12 -2
  5. xcoll/beam_elements/base.py +162 -62
  6. xcoll/beam_elements/blowup.py +1 -0
  7. xcoll/beam_elements/elements_src/black_absorber.h +57 -58
  8. xcoll/beam_elements/elements_src/black_crystal.h +49 -50
  9. xcoll/beam_elements/elements_src/everest_block.h +21 -11
  10. xcoll/beam_elements/elements_src/everest_collimator.h +100 -91
  11. xcoll/beam_elements/elements_src/everest_crystal.h +145 -140
  12. xcoll/beam_elements/elements_src/transparent_collimator.h +126 -0
  13. xcoll/beam_elements/elements_src/transparent_crystal.h +118 -0
  14. xcoll/beam_elements/everest.py +16 -5
  15. xcoll/beam_elements/monitor.py +1 -0
  16. xcoll/beam_elements/transparent.py +83 -0
  17. xcoll/colldb.py +15 -6
  18. xcoll/general.py +1 -1
  19. xcoll/general.py.orig +20 -0
  20. xcoll/headers/particle_states.py +51 -0
  21. xcoll/initial_distribution.py +121 -91
  22. xcoll/initial_distribution.py.orig +256 -0
  23. xcoll/interaction_record/interaction_record.py +2 -1
  24. xcoll/interaction_record/interaction_types.py +2 -2
  25. xcoll/line_tools.py +163 -73
  26. xcoll/lossmap.py +519 -127
  27. xcoll/plot.py +109 -0
  28. xcoll/rf_sweep.py +6 -0
  29. xcoll/scattering_routines/engine.py +414 -217
  30. xcoll/scattering_routines/environment.py +297 -0
  31. xcoll/scattering_routines/everest/amorphous.h +95 -71
  32. xcoll/scattering_routines/everest/{channeling.h → channelling.h} +121 -112
  33. xcoll/scattering_routines/everest/constants.h +1 -1
  34. xcoll/scattering_routines/everest/crystal_parameters.h +9 -9
  35. xcoll/scattering_routines/everest/everest.h +8 -3
  36. xcoll/scattering_routines/everest/everest.py +2 -1
  37. xcoll/scattering_routines/everest/ionisation_loss.h +141 -0
  38. xcoll/scattering_routines/everest/jaw.h +19 -24
  39. xcoll/scattering_routines/everest/materials.py +2 -0
  40. xcoll/scattering_routines/everest/multiple_coulomb_scattering.h +2 -2
  41. xcoll/scattering_routines/everest/nuclear_interaction.h +35 -19
  42. xcoll/scattering_routines/everest/properties.h +3 -72
  43. xcoll/xaux.py +65 -109
  44. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/METADATA +5 -5
  45. xcoll-0.6.1.dist-info/RECORD +138 -0
  46. xcoll/_manager.py +0 -22
  47. xcoll/headers/particle_states.h +0 -25
  48. xcoll/install.py +0 -35
  49. xcoll/scattering_routines/geant4/collimasim/.git +0 -1
  50. xcoll/scattering_routines/geant4/collimasim/.gitignore +0 -12
  51. xcoll/scattering_routines/geant4/collimasim/.gitmodules +0 -3
  52. xcoll/scattering_routines/geant4/collimasim/CMakeLists.txt +0 -26
  53. xcoll/scattering_routines/geant4/collimasim/README.md +0 -21
  54. xcoll/scattering_routines/geant4/collimasim/docs/Makefile +0 -20
  55. xcoll/scattering_routines/geant4/collimasim/docs/make.bat +0 -35
  56. xcoll/scattering_routines/geant4/collimasim/docs/source/collimasim.rst +0 -10
  57. xcoll/scattering_routines/geant4/collimasim/docs/source/conf.py +0 -59
  58. xcoll/scattering_routines/geant4/collimasim/docs/source/index.rst +0 -26
  59. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.appveyor.yml +0 -37
  60. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-format +0 -19
  61. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-tidy +0 -65
  62. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.cmake-format.yaml +0 -73
  63. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.git +0 -1
  64. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CODEOWNERS +0 -9
  65. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CONTRIBUTING.md +0 -386
  66. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/bug-report.yml +0 -45
  67. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/config.yml +0 -8
  68. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/dependabot.yml +0 -16
  69. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler.yml +0 -8
  70. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler_merged.yml +0 -3
  71. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/pull_request_template.md +0 -19
  72. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/ci.yml +0 -969
  73. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/configure.yml +0 -84
  74. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/format.yml +0 -48
  75. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/labeler.yml +0 -16
  76. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/pip.yml +0 -103
  77. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.gitignore +0 -45
  78. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.pre-commit-config.yaml +0 -151
  79. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.readthedocs.yml +0 -3
  80. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/CMakeLists.txt +0 -297
  81. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/LICENSE +0 -29
  82. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/MANIFEST.in +0 -6
  83. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/README.rst +0 -180
  84. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Doxyfile +0 -23
  85. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Makefile +0 -192
  86. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/_static/theme_overrides.css +0 -11
  87. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/chrono.rst +0 -81
  88. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/custom.rst +0 -93
  89. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/eigen.rst +0 -310
  90. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/functional.rst +0 -109
  91. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/index.rst +0 -43
  92. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/overview.rst +0 -171
  93. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/stl.rst +0 -251
  94. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/strings.rst +0 -305
  95. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/classes.rst +0 -1297
  96. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/embedding.rst +0 -262
  97. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/exceptions.rst +0 -396
  98. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/functions.rst +0 -568
  99. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/misc.rst +0 -337
  100. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/index.rst +0 -13
  101. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/numpy.rst +0 -463
  102. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/object.rst +0 -286
  103. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/utilities.rst +0 -155
  104. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/smart_ptrs.rst +0 -174
  105. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/basics.rst +0 -308
  106. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.py +0 -91
  107. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.rst +0 -95
  108. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/changelog.rst +0 -2050
  109. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/classes.rst +0 -542
  110. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/cmake/index.rst +0 -8
  111. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/compiling.rst +0 -648
  112. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/conf.py +0 -381
  113. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/faq.rst +0 -343
  114. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/index.rst +0 -48
  115. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/installing.rst +0 -105
  116. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/limitations.rst +0 -72
  117. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11-logo.png +0 -0
  118. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.png +0 -0
  119. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.svg +0 -427
  120. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.png +0 -0
  121. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.svg +0 -427
  122. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/reference.rst +0 -130
  123. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/release.rst +0 -96
  124. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/requirements.txt +0 -8
  125. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/upgrade.rst +0 -548
  126. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/attr.h +0 -605
  127. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/buffer_info.h +0 -144
  128. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/cast.h +0 -1432
  129. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/chrono.h +0 -213
  130. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/common.h +0 -2
  131. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/complex.h +0 -65
  132. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/class.h +0 -709
  133. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/common.h +0 -1021
  134. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/descr.h +0 -104
  135. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/init.h +0 -346
  136. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/internals.h +0 -467
  137. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/type_caster_base.h +0 -978
  138. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/typeid.h +0 -55
  139. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eigen.h +0 -606
  140. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/embed.h +0 -284
  141. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eval.h +0 -163
  142. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/functional.h +0 -121
  143. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/gil.h +0 -193
  144. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/iostream.h +0 -275
  145. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/numpy.h +0 -1741
  146. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/operators.h +0 -163
  147. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/options.h +0 -65
  148. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pybind11.h +0 -2497
  149. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pytypes.h +0 -1879
  150. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl/filesystem.h +0 -103
  151. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl.h +0 -375
  152. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl_bind.h +0 -747
  153. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/noxfile.py +0 -88
  154. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__init__.py +0 -11
  155. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__main__.py +0 -52
  156. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.py +0 -12
  157. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.pyi +0 -6
  158. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/commands.py +0 -21
  159. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/py.typed +0 -0
  160. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.py +0 -482
  161. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.pyi +0 -63
  162. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pyproject.toml +0 -41
  163. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.cfg +0 -56
  164. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.py +0 -155
  165. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/CMakeLists.txt +0 -503
  166. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/conftest.py +0 -208
  167. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/constructor_stats.h +0 -275
  168. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/cross_module_gil_utils.cpp +0 -73
  169. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/env.py +0 -33
  170. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/pytest.ini +0 -0
  171. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/test_files.py +0 -279
  172. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/pytest.ini +0 -0
  173. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/test_setuphelper.py +0 -143
  174. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/local_bindings.h +0 -85
  175. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/object.h +0 -179
  176. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_cross_module_tests.cpp +0 -151
  177. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.cpp +0 -91
  178. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.h +0 -85
  179. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pytest.ini +0 -19
  180. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/requirements.txt +0 -12
  181. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.cpp +0 -26
  182. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.py +0 -25
  183. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.cpp +0 -216
  184. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.py +0 -163
  185. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.cpp +0 -286
  186. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.py +0 -536
  187. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.cpp +0 -107
  188. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.py +0 -248
  189. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.cpp +0 -227
  190. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.py +0 -202
  191. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.cpp +0 -84
  192. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.py +0 -210
  193. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.cpp +0 -550
  194. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.py +0 -473
  195. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/CMakeLists.txt +0 -84
  196. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/embed.cpp +0 -21
  197. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_embed/CMakeLists.txt +0 -28
  198. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_function/CMakeLists.txt +0 -39
  199. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_target/CMakeLists.txt +0 -46
  200. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/main.cpp +0 -6
  201. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_embed/CMakeLists.txt +0 -41
  202. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_function/CMakeLists.txt +0 -35
  203. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_target/CMakeLists.txt +0 -41
  204. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/test.py +0 -10
  205. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.cpp +0 -165
  206. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.py +0 -53
  207. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.cpp +0 -238
  208. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.py +0 -126
  209. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.cpp +0 -141
  210. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.py +0 -117
  211. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.cpp +0 -41
  212. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.py +0 -50
  213. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.cpp +0 -69
  214. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.py +0 -42
  215. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.cpp +0 -348
  216. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.py +0 -771
  217. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/CMakeLists.txt +0 -47
  218. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/catch.cpp +0 -22
  219. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/external_module.cpp +0 -23
  220. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.cpp +0 -326
  221. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.py +0 -15
  222. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.cpp +0 -148
  223. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.py +0 -272
  224. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.cpp +0 -119
  225. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.py +0 -51
  226. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval_call.py +0 -5
  227. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.cpp +0 -285
  228. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.h +0 -12
  229. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.py +0 -265
  230. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.cpp +0 -397
  231. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.py +0 -520
  232. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.cpp +0 -49
  233. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.py +0 -94
  234. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.cpp +0 -125
  235. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.py +0 -331
  236. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.cpp +0 -153
  237. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.py +0 -284
  238. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.cpp +0 -107
  239. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.py +0 -257
  240. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.cpp +0 -412
  241. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.py +0 -517
  242. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.cpp +0 -102
  243. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.py +0 -92
  244. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.cpp +0 -233
  245. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.py +0 -360
  246. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.cpp +0 -472
  247. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.py +0 -593
  248. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.cpp +0 -524
  249. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.py +0 -441
  250. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.cpp +0 -103
  251. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.py +0 -267
  252. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.cpp +0 -73
  253. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.py +0 -59
  254. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.cpp +0 -235
  255. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.py +0 -146
  256. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.cpp +0 -189
  257. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.py +0 -82
  258. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.cpp +0 -560
  259. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.py +0 -651
  260. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.cpp +0 -500
  261. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.py +0 -253
  262. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.cpp +0 -452
  263. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.py +0 -318
  264. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.cpp +0 -342
  265. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.py +0 -291
  266. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.cpp +0 -131
  267. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.py +0 -318
  268. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.cpp +0 -144
  269. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.py +0 -29
  270. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.cpp +0 -66
  271. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.py +0 -44
  272. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.cpp +0 -22
  273. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.py +0 -9
  274. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.cpp +0 -510
  275. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.py +0 -408
  276. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/valgrind-numpy-scipy.supp +0 -140
  277. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/valgrind-python.supp +0 -117
  278. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindCatch.cmake +0 -70
  279. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindEigen3.cmake +0 -86
  280. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindPythonLibsNew.cmake +0 -257
  281. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/check-style.sh +0 -44
  282. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/cmake_uninstall.cmake.in +0 -23
  283. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/libsize.py +0 -39
  284. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/make_changelog.py +0 -64
  285. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Common.cmake +0 -402
  286. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Config.cmake.in +0 -233
  287. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11NewTools.cmake +0 -276
  288. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Tools.cmake +0 -214
  289. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pyproject.toml +0 -3
  290. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_global.py.in +0 -65
  291. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_main.py.in +0 -41
  292. xcoll/scattering_routines/geant4/collimasim/pyproject.toml +0 -8
  293. xcoll/scattering_routines/geant4/collimasim/setup.py +0 -144
  294. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.cpp +0 -403
  295. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.hh +0 -100
  296. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.cpp +0 -763
  297. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.hh +0 -118
  298. xcoll/scattering_routines/geant4/collimasim/src/collimasim/__init__.py +0 -8
  299. xcoll/scattering_routines/geant4/collimasim/src/collimasim/bindings.cpp +0 -63
  300. xcoll/scattering_routines/geant4/collimasim/src/collimasim/pyCollimatorPass.py +0 -142
  301. xcoll/scattering_routines/geant4/collimasim/src/collimasim/xtrack_collimator.py +0 -556
  302. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/PKG-INFO +0 -6
  303. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/SOURCES.txt +0 -24
  304. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/dependency_links.txt +0 -1
  305. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/not-zip-safe +0 -1
  306. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/top_level.txt +0 -1
  307. xcoll/scattering_routines/geant4/collimasim/tests/README.md +0 -25
  308. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_forions.dat +0 -25
  309. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_new_example.dat +0 -18
  310. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_old_example.dat +0 -68
  311. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_testing.dat +0 -15
  312. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_yaml_example.yaml +0 -110
  313. xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps.dat +0 -7
  314. xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps_pyat_test.dat +0 -3
  315. xcoll/scattering_routines/geant4/collimasim/tests/resources/collonly_twiss_file_example.tfs +0 -54
  316. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings.gmad +0 -3
  317. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_black_absorber.gmad +0 -3
  318. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_ions.gmad +0 -5
  319. xcoll/scattering_routines/geant4/collimasim/tests/resources/twiss_file_testing.tfs +0 -51
  320. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat.py +0 -65
  321. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_passmethod.py +0 -59
  322. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_tracking.py +0 -102
  323. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack.py +0 -75
  324. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_angle.py +0 -74
  325. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_colldb_load.py +0 -84
  326. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction.py +0 -159
  327. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction_ion.py +0 -99
  328. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_ions.py +0 -78
  329. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_lost_energy.py +0 -88
  330. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tilt.py +0 -80
  331. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking.py +0 -97
  332. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking_ions.py +0 -96
  333. xcoll-0.5.12.dist-info/RECORD +0 -415
  334. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/LICENSE +0 -0
  335. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/NOTICE +0 -0
  336. {xcoll-0.5.12.dist-info → xcoll-0.6.1.dist-info}/WHEEL +0 -0
@@ -1,74 +0,0 @@
1
- import numpy as np
2
- import xobjects as xo
3
- import xtrack as xt
4
- import xpart as xp
5
-
6
- import collimasim as cs
7
- from matplotlib import pyplot as plt
8
-
9
- import multiprocessing
10
-
11
- def make_particles():
12
- np.random.seed(seed=1994)
13
- n_part = 100
14
- particles = xp.Particles(
15
- _capacity=n_part,
16
- p0c = 1.e3, # 1 KeV dummy particles
17
- mass0 = xp.ELECTRON_MASS_EV,
18
- x=np.linspace(0.15, 0.25, n_part), # Offsets are x=0.2, y=0.3
19
- px=np.zeros(n_part),
20
- y=np.linspace(0.25, 0.35, n_part),
21
- py=np.zeros(n_part),
22
- zeta=np.zeros(n_part),
23
- delta=np.zeros(n_part),
24
- )
25
-
26
- return particles
27
-
28
-
29
- def test_xtrack_rotation():
30
- np.random.seed(seed=1994)
31
-
32
- particles = make_particles()
33
- g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_testing.dat",
34
- bdsim_config_file="resources/settings_black_absorber.gmad",
35
- tfs_file="resources/twiss_file_testing.tfs",
36
- reference_pdg_id=-11,
37
- reference_kinetic_energy=0.510998946e6 * 10000,
38
- emittance_norm=(1.e-6, 1.e-6),
39
- relative_energy_cut=0.001,
40
- seed=1993,
41
- # batchMode=False
42
- batchMode=True
43
- )
44
-
45
- coll1 = g4man.make_xtg4_collimator("coll_skew") # Use new convenience method
46
-
47
- # Generate a simple sequence
48
- line = xt.Line(
49
- elements=[coll1,
50
- ])
51
-
52
- context = xo.ContextCpu()
53
- line.build_tracker(_context=context)
54
-
55
- part_copy = particles.copy()
56
- line.track(part_copy, num_turns=1)
57
-
58
- print(f"Lost particles: {sum(part_copy.state==-333)} / {len(part_copy.state)}")
59
- assert sum(part_copy.state==-333) == 30
60
-
61
- return part_copy
62
-
63
-
64
- def main():
65
- part_g4 = test_xtrack_rotation()
66
-
67
- # plt.scatter(part_g4.x, part_g4.y)
68
- # plt.show()
69
-
70
- print('Done!')
71
-
72
-
73
- if __name__ == '__main__':
74
- main()
@@ -1,84 +0,0 @@
1
- import numpy as np
2
- import collimasim as cs
3
-
4
- def test_yaml_colldb_load():
5
- try: # yaml file loading is not implemented yet, so expect an error
6
- g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_yaml_example.yaml",
7
- bdsim_config_file="resources/settings_black_absorber.gmad",
8
- tfs_file="resources/twiss_file_testing.tfs",
9
- reference_pdg_id=-11,
10
- reference_kinetic_energy=182.4994890018054e9, # eV
11
- emittance_norm=(0.000521429683675842, 1.0357164949725628e-06),
12
- relative_energy_cut=0.001,
13
- seed=1993,
14
- batchMode=True)
15
- except ValueError as e:
16
- print(f"YAML file loading sucessfuly reports an error: {e}")
17
-
18
-
19
- def test_old_colldb_load():
20
- g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_old_example.dat",
21
- bdsim_config_file="resources/settings_black_absorber.gmad",
22
- tfs_file="resources/collonly_twiss_file_example.tfs",
23
- reference_pdg_id=-11,
24
- reference_kinetic_energy=182.4994890018054e9, # eV
25
- emittance_norm=(0.000521429683675842, 1.0357164949725628e-06),
26
- relative_energy_cut=0.001,
27
- seed=1993,
28
- batchMode=True)
29
- assert np.isclose(g4man.collimators['tcp.a.b1']['halfgap'], 0.00976272689045678, atol=1e-10, rtol=1e-6)
30
-
31
-
32
- def test_new_colldb_load():
33
- g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_new_example.dat",
34
- bdsim_config_file="resources/settings_black_absorber.gmad",
35
- tfs_file="resources/collonly_twiss_file_example.tfs",
36
- reference_pdg_id=-11,
37
- reference_kinetic_energy=182.4994890018054e9, # eV
38
- emittance_norm=(0.000521429683675842, 1.0357164949725628e-06),
39
- relative_energy_cut=0.001,
40
- seed=1993,
41
- batchMode=True)
42
- assert np.isclose(g4man.collimators['tcp.a.b1']['halfgap'], 0.00976272689045678, atol=1e-10, rtol=1e-6)
43
-
44
-
45
- def test_collgaps_load():
46
- g4man = cs.Geant4CollimationManager(collimator_file="resources/collgaps.dat",
47
- bdsim_config_file="resources/settings_black_absorber.gmad",
48
- tfs_file="resources/collonly_twiss_file_example.tfs",
49
- reference_pdg_id=-11,
50
- reference_kinetic_energy=182.4994890018054e9, # eV
51
- emittance_norm=(0.000521429683675842, 1.0357164949725628e-06),
52
- relative_energy_cut=0.001,
53
- seed=1993,
54
- batchMode=True)
55
- assert np.isclose(g4man.collimators['tcp.a.b1']['halfgap'], 0.00976272689045678, atol=1e-10, rtol=1e-6)
56
-
57
-
58
- def test_badfile_load():
59
- try:
60
- # This is an example of loading an invalid file
61
- g4man = cs.Geant4CollimationManager(collimator_file="resources/settings.gmad",
62
- bdsim_config_file="resources/settings_black_absorber.gmad",
63
- tfs_file="resources/collonly_twiss_file_example.tfs",
64
- reference_pdg_id=-11,
65
- reference_kinetic_energy=182.4994890018054e9, # eV
66
- emittance_norm=(0.000521429683675842, 1.0357164949725628e-06),
67
- relative_energy_cut=0.001,
68
- seed=1993,
69
- batchMode=True)
70
- except ValueError as e:
71
- print(f"Invalid file loading sucessfuly reports an error: {e}")
72
-
73
-
74
- def main():
75
- # test_yaml_colldb_load()
76
- test_new_colldb_load()
77
- # test_old_colldb_load()
78
- # test_collgaps_load()
79
- # test_badfile_load()
80
-
81
- if __name__ == '__main__':
82
- main()
83
-
84
-
@@ -1,159 +0,0 @@
1
- import numpy as np
2
- import xobjects as xo
3
- import xtrack as xt
4
- import xpart as xp
5
-
6
- import collimasim as cs
7
-
8
- import multiprocessing
9
-
10
- def test_fodo():
11
- np.random.seed(seed=1994)
12
-
13
- g4man = cs.Geant4CollimationManager(#collimator_file="resources/CollDB_new_example.dat",
14
- #collimator_file="resources/CollDB_old_example.dat",
15
- collimator_file="resources/collgaps.dat",
16
- bdsim_config_file="resources/settings.gmad",
17
- tfs_file="resources/collonly_twiss_file_example.tfs",
18
- reference_pdg_id=-11,
19
- reference_kinetic_energy=182.4994890018054e9, # eV
20
- emittance_norm=(0.000521429683675842, 1.0357164949725628e-06),
21
- relative_energy_cut=0.001,
22
- seed=1993,
23
- batchMode=True)
24
-
25
- coll1 = g4man.make_xtg4_collimator("TCP.A.B1") # Use new convenience method
26
- coll2 = g4man.make_xtg4_collimator("TCP.B.B1")
27
-
28
- ## Generate a simple sequence
29
- # The 1 m drift are split in 2 so the global aperture check at 1 m
30
- # can remove low-energy particles with large angles
31
- line = xt.Line(
32
- elements=[xt.Drift(length=0.5),
33
- xt.Drift(length=0.5),
34
- coll1,
35
- xt.Multipole(knl=[0, 1.], ksl=[0,0]),
36
- xt.Drift(length=0.5),
37
- xt.Drift(length=0.5),
38
- coll2,
39
- xt.Multipole(knl=[0, -1.], ksl=[0,0])
40
- ])
41
-
42
-
43
- ## Chose a context
44
- context = xo.ContextCpu() # For CPU
45
- # context = xo.ContectCupy() # For CUDA GPUs
46
- # context = xo.ContectPyopencl() # For OpenCL GPUs
47
-
48
- ## Transfer lattice on context and compile tracking code
49
- line.config.global_xy_limit = 0.1
50
- line.config.XTRACK_USE_EXACT_DRIFTS = True
51
- line.build_tracker(_context=context)
52
-
53
- ## Build particle object on context
54
- n_part = 100
55
- N_max_expected_products = 5000
56
- n_turns = 3
57
-
58
- tot_num_part = n_part + N_max_expected_products
59
-
60
- particles = xp.Particles(
61
- _capacity=tot_num_part,
62
- p0c = 185.e9,
63
- mass0 = xp.constants.ELECTRON_MASS_EV,
64
- x=np.random.uniform(-1e-2, 1e-2, n_part),
65
- px=np.random.uniform(-1e-5, 1e-5, n_part),
66
- y=np.random.uniform(-2e-3, 2e-3, n_part),
67
- py=np.random.uniform(-3e-5, 3e-5, n_part),
68
- zeta=np.random.uniform(-1e-2, 1e-2, n_part),
69
- delta=np.random.uniform(-1e-4, 1e-4, n_part),
70
- )
71
-
72
- ## Track (saving turn-by-turn data)
73
- print(f"{particles._num_active_particles=}")
74
- print(f"{particles._num_lost_particles=}")
75
- print("turn=0")
76
-
77
- for turn in range(n_turns):
78
- line.track(particles, num_turns=1)
79
-
80
- print(f"{particles._num_active_particles=}")
81
- print(f"{particles._num_lost_particles=}")
82
- print(f"{turn=}")
83
-
84
- if particles._num_active_particles==0:
85
- break
86
-
87
- total_particles = particles._num_active_particles + particles._num_lost_particles
88
- print(f"Surviving particles: {particles._num_active_particles} / {total_particles}")
89
-
90
- # Allow 2 particle tolerance for rounding errors on different installation
91
- assert np.isclose(sum(particles.state==1), 8, atol=2) # Active particles
92
-
93
- def main():
94
- test_fodo()
95
-
96
- if __name__ == '__main__':
97
- main()
98
-
99
- # The BDSIM link instances are no re-entry safe so can only run 1 test per file
100
- # If multiple instances are required, multiprocessing can offer a solution,
101
- # as spawned processes correctly handle the memory
102
- # Comment out the code below to try this functionality
103
- #
104
- # def test_object():
105
- # N_part = 10
106
- # N_max_expected_products = 500
107
- # tot_num_part = N_part + N_max_expected_products
108
- # particles = xp.Particles(
109
- # _capacity=tot_num_part,
110
- # p0c = 185.e9,
111
- # x = np.zeros(N_part),
112
- # y = np.zeros(N_part),
113
- # zeta = np.zeros(N_part),
114
- # px = np.zeros(N_part),
115
- # py = np.zeros(N_part),
116
- # delta = np.zeros(N_part))
117
- #
118
- # particles.x[1] = 0.3
119
- # particles.x[4] = 0.3
120
- #
121
- # print(particles.x)
122
- #
123
- # g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_old_example.dat",
124
- # bdsim_config_file="resources/settings.gmad",
125
- # tfs_file="resources/collonly_twiss_file_example.tfs",
126
- # reference_pdg_id=-11,
127
- # reference_kinetic_energy=182.4994890018054e9, # eV
128
- # emittance_norm=(0.000521429683675842, 1.0357164949725628e-06),
129
- # relative_energy_cut=0.001,
130
- # seed=1993,
131
- # batchMode=True)
132
- #
133
- # coll1 = xt.BeamInteraction(interaction_process=cs.Geant4Collimator(name="tcp.a.b1",
134
- # g4manager=g4man))
135
- # coll2 = xt.BeamInteraction(interaction_process=cs.Geant4Collimator(name="tcp.a.b1",
136
- # g4manager=g4man))
137
- #
138
- # coll1.track(particles)
139
- # coll2.track(particles)
140
- #
141
- # print(f"Surviving after the second collimator: {sum(particles.state == 1)} / {particles.state}")
142
- # assert sum(particles.state == 1) == 44 # Active particles
143
- #
144
- #
145
- # def main():
146
- # # Initialising and de-allocating the collimasim extensions
147
- # # may not clear up the memory properly. This seems to be a Python
148
- # # limitation. Multiprocessing processes seem to solve this issue
149
- # p1 = multiprocessing.Process(target=test_object)
150
- # p2 = multiprocessing.Process(target=test_fodo)
151
- #
152
- # p1.start()
153
- # p1.join()
154
- #
155
- # p2.start()
156
- # p2.join()
157
- #
158
- # if __name__ == '__main__':
159
- # main()
@@ -1,99 +0,0 @@
1
- import numpy as np
2
- import xobjects as xo
3
- import xtrack as xt
4
- import xpart as xp
5
-
6
- import collimasim as cs
7
-
8
- import multiprocessing
9
-
10
- def test_fodo():
11
- np.random.seed(seed=1994)
12
-
13
- # Random parameters to get some scattering in the collimators
14
- g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_forions.dat",
15
- bdsim_config_file="resources/settings_ions.gmad",
16
- tfs_file="resources/collonly_twiss_file_example.tfs",
17
- reference_pdg_id=xp.pdg.get_pdg_id_from_name('Pb208'),
18
- reference_kinetic_energy=36706.8206525e9,
19
- emittance_norm=(5e-5, 5e-5),
20
- relative_energy_cut=0.001,
21
- seed=1993,
22
- batchMode=True)
23
-
24
- ref_mass = g4man.g4link.getReferenceMass() * 1e9 # convert to eV
25
-
26
- coll1 = g4man.make_xtg4_collimator("TCP.A.B1") # Use new convenience method
27
- coll2 = g4man.make_xtg4_collimator("TCP.B.B1")
28
-
29
- ## Generate a simple sequence
30
- # The 1 m drift are split in 2 so the global aperture check at 1 m
31
- # can remove low-energy particles with large angles
32
- line = xt.Line(
33
- elements=[xt.Drift(length=0.5),
34
- xt.Drift(length=0.5),
35
- coll1,
36
- xt.Multipole(knl=[0, 1.], ksl=[0,0]),
37
- xt.Drift(length=0.5),
38
- xt.Drift(length=0.5),
39
- coll2,
40
- xt.Multipole(knl=[0, -1.], ksl=[0,0])
41
- ])
42
-
43
-
44
- ## Chose a context
45
- context = xo.ContextCpu() # For CPU
46
- # context = xo.ContectCupy() # For CUDA GPUs
47
- # context = xo.ContectPyopencl() # For OpenCL GPUs
48
-
49
- ## Transfer lattice on context and compile tracking code
50
- line.config.global_xy_limit = 0.1
51
- line.config.XTRACK_USE_EXACT_DRIFTS = True
52
- line.build_tracker(_context=context)
53
-
54
- ## Build particle object on context
55
- n_part = 100
56
- N_max_expected_products = 50000
57
- n_turns = 3
58
-
59
- tot_num_part = n_part + N_max_expected_products
60
-
61
- particles = xp.Particles(
62
- _capacity=tot_num_part,
63
- p0c = 36900e9,
64
- mass0 = ref_mass,
65
- x=np.random.uniform(-1e-2, 1e-2, n_part),
66
- px=np.random.uniform(-1e-5, 1e-5, n_part),
67
- y=np.random.uniform(-2e-3, 2e-3, n_part),
68
- py=np.random.uniform(-3e-5, 3e-5, n_part),
69
- zeta=np.random.uniform(-1e-2, 1e-2, n_part),
70
- delta=np.random.uniform(-1e-4, 1e-4, n_part),
71
- pdg_id=np.full(n_part, xp.pdg.get_pdg_id_from_name('Pb208'))
72
- )
73
-
74
- ## Track (saving turn-by-turn data)
75
- print(f"{particles._num_active_particles=}")
76
- print(f"{particles._num_lost_particles=}")
77
- print("turn=0")
78
-
79
- for turn in range(n_turns):
80
- line.track(particles, num_turns=1)
81
-
82
- print(f"{particles._num_active_particles=}")
83
- print(f"{particles._num_lost_particles=}")
84
- print(f"{turn=}")
85
-
86
- if particles._num_active_particles==0:
87
- break
88
-
89
- total_particles = particles._num_active_particles + particles._num_lost_particles
90
- print(f"Surviving particles: {particles._num_active_particles} / {total_particles}")
91
-
92
- # Allow 1 particle tolerance for rounding errors on different installation
93
- assert np.isclose(sum(particles.state==1), 1143, atol=1) # Active particles
94
-
95
- def main():
96
- test_fodo()
97
-
98
- if __name__ == '__main__':
99
- main()
@@ -1,78 +0,0 @@
1
- import numpy as np
2
- import xtrack as xt
3
- import xpart as xp
4
-
5
- import collimasim as cs
6
-
7
-
8
- def test_object_creation():
9
- N_part = 10
10
- N_max_expected_products = 10
11
-
12
- tot_num_part = N_part
13
-
14
- particles = xp.Particles(
15
- p0c = 36900e9,
16
- x = np.zeros(tot_num_part),
17
- y = np.zeros(tot_num_part),
18
- zeta = np.zeros(tot_num_part),
19
- px = np.zeros(tot_num_part),
20
- py = np.zeros(tot_num_part),
21
- delta = np.zeros(tot_num_part))
22
-
23
- particles.num_particles = N_part
24
-
25
- particles.x[1] = 0.3
26
- particles.y[2] = 0.3
27
-
28
- # Random parameters to get some scattering in the collimators
29
- g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_forions.dat",
30
- bdsim_config_file="resources/settings_ions.gmad",
31
- tfs_file="resources/collonly_twiss_file_example.tfs",
32
- reference_pdg_id=xp.pdg.get_pdg_id_from_name('Pb208'),
33
- reference_kinetic_energy=36706.8206525e9,
34
- emittance_norm=(0.000521429683675842, 0.000521429683675842),
35
- relative_energy_cut=0.001,
36
- seed=1993,
37
- batchMode=True)
38
-
39
- coll1 = cs.Geant4Collimator(name="tcp.a.b1", g4manager=g4man)
40
- coll2 = cs.Geant4Collimator(name="tcp.b.b1", g4manager=g4man)
41
-
42
-
43
- print("Particle coordinates (x) before first collimator")
44
- print (particles.delta)
45
-
46
- prods = coll1.interact(particles)
47
-
48
- print("Particle coordinates (x) after first collimator")
49
- print (particles.x)
50
- print (particles.y)
51
-
52
- print("="*30)
53
- print("Products:")
54
- for crd in prods:
55
- print(crd, ":", prods[crd])
56
- print("="*30)
57
-
58
- prods = coll2.interact(particles)
59
-
60
- print("Particle coordinates (x) after second collimator")
61
- print (particles.x)
62
- print (particles.y)
63
-
64
- print("="*30)
65
- print("Products:")
66
- for crd in prods:
67
- print(crd, ":", prods[crd])
68
- print("="*30)
69
-
70
- assert len(prods['x']) == 59
71
-
72
-
73
- def main():
74
- test_object_creation()
75
-
76
-
77
- if __name__ == '__main__':
78
- main()
@@ -1,88 +0,0 @@
1
- import numpy as np
2
- import xtrack as xt
3
- import xpart as xp
4
-
5
- import collimasim as cs
6
- import pandas as pd
7
-
8
- def test_energy_diffrential():
9
- N_part = 10
10
- N_max_expected_products = 10
11
-
12
- particles = xp.Particles(
13
- _capaccity = N_part,
14
- p0c = 36900e9,
15
- x = np.zeros(N_part),
16
- y = np.zeros(N_part),
17
- zeta = np.zeros(N_part),
18
- px = np.zeros(N_part),
19
- py = np.zeros(N_part),
20
- delta = np.zeros(N_part),
21
- pdg_id = xp.pdg.get_pdg_id_from_name('Pb208'),
22
- mass0=193687676197.13638,
23
- )
24
-
25
- particles.x[1] = 0.04226982005192951 + 10e-6
26
- particles.px[1] = 1e-7
27
- particles.x[2] = -0.04226982005192951 - 10e-6
28
- particles.px[2] = -1e-7
29
- particles.x[3] = 0.04226982005192951 + 10e-6
30
- particles.y[4] = 0.05
31
-
32
- part_orig = particles.copy()
33
-
34
- # Random parameters to get some scattering in the collimators
35
- g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_forions.dat",
36
- bdsim_config_file="resources/settings_ions.gmad",
37
- tfs_file="resources/collonly_twiss_file_example.tfs",
38
- reference_pdg_id=xp.pdg.get_pdg_id_from_name('Pb208'),
39
- reference_kinetic_energy=36706.8206525e9,
40
- emittance_norm=(0.000521429683675842, 0.000521429683675842),
41
- relative_energy_cut=0.0001,
42
- seed=1993,
43
- batchMode=True)
44
-
45
- coll1 = cs.Geant4Collimator(name="tcp.a.b1", g4manager=g4man)
46
-
47
-
48
- prods = coll1.interact(particles)
49
-
50
- part_df = particles.to_pandas(compact=True)
51
- part_orig_df = part_orig.to_pandas(compact=True)
52
-
53
- part_mass_ratio = part_df.charge_ratio / part_df.chi
54
- part_mom = (part_df.delta + 1) * part_df.p0c * part_mass_ratio
55
- part_mass = part_mass_ratio * part_df.mass0
56
- part_tot_energy = np.sqrt(part_mom**2 + part_mass**2)
57
- part_df['energy'] = part_tot_energy
58
-
59
- part_orig_mass_ratio = part_orig_df.charge_ratio / part_orig_df.chi
60
- part_orig_mom = (part_orig_df.delta + 1) * part_orig_df.p0c * part_orig_mass_ratio
61
- part_orig_mass = part_orig_mass_ratio * part_orig_df.mass0
62
- part_orig_tot_energy = np.sqrt(part_orig_mom**2 + part_orig_mass**2)
63
- part_orig_df['energy'] = part_tot_energy
64
-
65
- prod_df = pd.DataFrame(prods)
66
-
67
- prod_mass_ratio = prod_df.mass_ratio
68
- prod_mom = (prod_df.delta + 1) * part_df.p0c[0] * prod_mass_ratio
69
- prod_mass = prod_mass_ratio * part_df.mass0[0]
70
- prod_tot_energy = np.sqrt(prod_mom**2 + prod_mass**2)
71
- prod_df['energy'] = prod_tot_energy
72
-
73
- for part_id in [1, 2, 3]:
74
- pp = part_df[part_df['particle_id'] == part_id]
75
- pp_orig = part_df[part_orig_df['particle_id'] == part_id]
76
- prods_pp = prod_df[prod_df['parent_particle_id'] == part_id]
77
-
78
- combined_energy = float(pp['energy']) + float(sum(prods_pp['energy']))
79
- energy_diff = combined_energy - float(pp_orig['energy'])
80
-
81
-
82
-
83
- def main():
84
- test_energy_diffrential()
85
-
86
-
87
- if __name__ == '__main__':
88
- main()
@@ -1,80 +0,0 @@
1
- import numpy as np
2
- import xobjects as xo
3
- import xtrack as xt
4
- import xpart as xp
5
-
6
- import collimasim as cs
7
- from matplotlib import pyplot as plt
8
-
9
- import multiprocessing
10
-
11
- def make_particles():
12
- np.random.seed(seed=1994)
13
- n_part = 100
14
- particles = xp.Particles(
15
- _capacity=n_part,
16
- p0c = 1.e3, # 1 KeV dummy particles
17
- mass0 = xp.ELECTRON_MASS_EV,
18
- x=np.linspace(0.1, 0.3, n_part), # Offsets are x=0.2, y=0.3
19
- #x=np.random.uniform(0.1, 0.3, n_part), # Offsets are x=0.2, y=0.3
20
- px=np.zeros(n_part),
21
- y=np.linspace(0.2, 0.4, n_part),
22
- #y=np.random.uniform(0.2, 0.4, n_part),
23
- #y=np.zeros(n_part) + 0.3,
24
- py=np.zeros(n_part),
25
- zeta=np.zeros(n_part),
26
- delta=np.zeros(n_part),
27
- )
28
-
29
- return particles
30
-
31
-
32
- def test_xtrack_tilt():
33
- np.random.seed(seed=1994)
34
- particles = make_particles()
35
-
36
- g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_testing.dat",
37
- bdsim_config_file="resources/settings_black_absorber.gmad",
38
- tfs_file="resources/twiss_file_testing.tfs",
39
- reference_pdg_id=-11,
40
- reference_kinetic_energy=0.510998946e6 * 10000,
41
- emittance_norm=(1.e-6, 1.e-6),
42
- relative_energy_cut=0.001,
43
- seed=1993,
44
- # batchMode=False
45
- batchMode=True
46
- )
47
-
48
- coll1 = g4man.make_xtg4_collimator("coll_skew_tilted") # Use new convenience method
49
-
50
- # Generate a simple sequence
51
- line = xt.Line(
52
- elements=[coll1,
53
- ])
54
-
55
- context = xo.ContextCpu()
56
- line.build_tracker(_context=context)
57
-
58
- part_copy = particles.copy()
59
- line.track(part_copy, num_turns=1)
60
-
61
- print(f"Lost particles: {sum(part_copy.state==-333)} / {len(part_copy.state)}")
62
- assert sum(part_copy.state==-333) == 89
63
-
64
- return part_copy
65
-
66
-
67
- def main():
68
- part_g4 = test_xtrack_tilt()
69
-
70
- # plt.scatter(part_g4.x, part_g4.y, c=part_g4.state)
71
- # ax = plt.gca()
72
- # ax.axvline(0.15, c='r')
73
- # ax.axvline(0.25, c='r')
74
- # plt.show()
75
-
76
- print('Done!')
77
-
78
-
79
- if __name__ == '__main__':
80
- main()