scitex 2.0.0__py2.py3-none-any.whl → 2.1.0__py2.py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scitex/__init__.py +53 -15
- scitex/__main__.py +72 -26
- scitex/__version__.py +1 -1
- scitex/_sh.py +145 -23
- scitex/ai/__init__.py +30 -16
- scitex/ai/_gen_ai/_Anthropic.py +5 -7
- scitex/ai/_gen_ai/_BaseGenAI.py +2 -2
- scitex/ai/_gen_ai/_DeepSeek.py +10 -2
- scitex/ai/_gen_ai/_Google.py +2 -2
- scitex/ai/_gen_ai/_Llama.py +2 -2
- scitex/ai/_gen_ai/_OpenAI.py +2 -2
- scitex/ai/_gen_ai/_PARAMS.py +51 -65
- scitex/ai/_gen_ai/_Perplexity.py +2 -2
- scitex/ai/_gen_ai/__init__.py +25 -14
- scitex/ai/_gen_ai/_format_output_func.py +4 -4
- scitex/ai/classification/{classifier_server.py → Classifier.py} +5 -5
- scitex/ai/classification/CrossValidationExperiment.py +374 -0
- scitex/ai/classification/__init__.py +43 -4
- scitex/ai/classification/reporters/_BaseClassificationReporter.py +281 -0
- scitex/ai/classification/reporters/_ClassificationReporter.py +773 -0
- scitex/ai/classification/reporters/_MultiClassificationReporter.py +406 -0
- scitex/ai/classification/reporters/_SingleClassificationReporter.py +1834 -0
- scitex/ai/classification/reporters/__init__.py +11 -0
- scitex/ai/classification/reporters/reporter_utils/_Plotter.py +1028 -0
- scitex/ai/classification/reporters/reporter_utils/__init__.py +80 -0
- scitex/ai/classification/reporters/reporter_utils/aggregation.py +457 -0
- scitex/ai/classification/reporters/reporter_utils/data_models.py +313 -0
- scitex/ai/classification/reporters/reporter_utils/reporting.py +1056 -0
- scitex/ai/classification/reporters/reporter_utils/storage.py +221 -0
- scitex/ai/classification/reporters/reporter_utils/validation.py +395 -0
- scitex/ai/classification/timeseries/_TimeSeriesBlockingSplit.py +568 -0
- scitex/ai/classification/timeseries/_TimeSeriesCalendarSplit.py +688 -0
- scitex/ai/classification/timeseries/_TimeSeriesMetadata.py +139 -0
- scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit.py +1716 -0
- scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit_v01-not-using-n_splits.py +1685 -0
- scitex/ai/classification/timeseries/_TimeSeriesStrategy.py +84 -0
- scitex/ai/classification/timeseries/_TimeSeriesStratifiedSplit.py +610 -0
- scitex/ai/classification/timeseries/__init__.py +39 -0
- scitex/ai/classification/timeseries/_normalize_timestamp.py +436 -0
- scitex/ai/clustering/_umap.py +2 -2
- scitex/ai/feature_extraction/vit.py +1 -0
- scitex/ai/feature_selection/__init__.py +30 -0
- scitex/ai/feature_selection/feature_selection.py +364 -0
- scitex/ai/loss/multi_task_loss.py +1 -1
- scitex/ai/metrics/__init__.py +51 -4
- scitex/ai/metrics/_calc_bacc.py +61 -0
- scitex/ai/metrics/_calc_bacc_from_conf_mat.py +38 -0
- scitex/ai/metrics/_calc_clf_report.py +78 -0
- scitex/ai/metrics/_calc_conf_mat.py +93 -0
- scitex/ai/metrics/_calc_feature_importance.py +183 -0
- scitex/ai/metrics/_calc_mcc.py +61 -0
- scitex/ai/metrics/_calc_pre_rec_auc.py +116 -0
- scitex/ai/metrics/_calc_roc_auc.py +110 -0
- scitex/ai/metrics/_calc_seizure_prediction_metrics.py +490 -0
- scitex/ai/metrics/{silhoute_score_block.py → _calc_silhouette_score.py} +15 -8
- scitex/ai/metrics/_normalize_labels.py +83 -0
- scitex/ai/plt/__init__.py +47 -8
- scitex/ai/plt/{_conf_mat.py → _plot_conf_mat.py} +158 -87
- scitex/ai/plt/_plot_feature_importance.py +323 -0
- scitex/ai/plt/_plot_learning_curve.py +345 -0
- scitex/ai/plt/_plot_optuna_study.py +225 -0
- scitex/ai/plt/_plot_pre_rec_curve.py +290 -0
- scitex/ai/plt/_plot_roc_curve.py +255 -0
- scitex/ai/training/{learning_curve_logger.py → _LearningCurveLogger.py} +197 -213
- scitex/ai/training/__init__.py +2 -2
- scitex/ai/utils/grid_search.py +3 -3
- scitex/benchmark/__init__.py +52 -0
- scitex/benchmark/benchmark.py +400 -0
- scitex/benchmark/monitor.py +370 -0
- scitex/benchmark/profiler.py +297 -0
- scitex/browser/__init__.py +48 -0
- scitex/browser/automation/CookieHandler.py +216 -0
- scitex/browser/automation/__init__.py +7 -0
- scitex/browser/collaboration/__init__.py +55 -0
- scitex/browser/collaboration/auth_helpers.py +94 -0
- scitex/browser/collaboration/collaborative_agent.py +136 -0
- scitex/browser/collaboration/credential_manager.py +188 -0
- scitex/browser/collaboration/interactive_panel.py +400 -0
- scitex/browser/collaboration/persistent_browser.py +170 -0
- scitex/browser/collaboration/shared_session.py +383 -0
- scitex/browser/collaboration/standard_interactions.py +246 -0
- scitex/browser/collaboration/visual_feedback.py +181 -0
- scitex/browser/core/BrowserMixin.py +326 -0
- scitex/browser/core/ChromeProfileManager.py +446 -0
- scitex/browser/core/__init__.py +9 -0
- scitex/browser/debugging/__init__.py +18 -0
- scitex/browser/debugging/_browser_logger.py +657 -0
- scitex/browser/debugging/_highlight_element.py +143 -0
- scitex/browser/debugging/_show_grid.py +154 -0
- scitex/browser/interaction/__init__.py +24 -0
- scitex/browser/interaction/click_center.py +149 -0
- scitex/browser/interaction/click_with_fallbacks.py +206 -0
- scitex/browser/interaction/close_popups.py +498 -0
- scitex/browser/interaction/fill_with_fallbacks.py +209 -0
- scitex/browser/pdf/__init__.py +14 -0
- scitex/browser/pdf/click_download_for_chrome_pdf_viewer.py +200 -0
- scitex/browser/pdf/detect_chrome_pdf_viewer.py +198 -0
- scitex/browser/remote/CaptchaHandler.py +434 -0
- scitex/browser/remote/ZenRowsAPIClient.py +347 -0
- scitex/browser/remote/ZenRowsBrowserManager.py +570 -0
- scitex/browser/remote/__init__.py +11 -0
- scitex/browser/stealth/HumanBehavior.py +344 -0
- scitex/browser/stealth/StealthManager.py +1008 -0
- scitex/browser/stealth/__init__.py +9 -0
- scitex/browser/template.py +122 -0
- scitex/capture/__init__.py +110 -0
- scitex/capture/__main__.py +25 -0
- scitex/capture/capture.py +848 -0
- scitex/capture/cli.py +233 -0
- scitex/capture/gif.py +344 -0
- scitex/capture/mcp_server.py +961 -0
- scitex/capture/session.py +70 -0
- scitex/capture/utils.py +705 -0
- scitex/cli/__init__.py +17 -0
- scitex/cli/cloud.py +447 -0
- scitex/cli/main.py +42 -0
- scitex/cli/scholar.py +280 -0
- scitex/context/_suppress_output.py +5 -3
- scitex/db/__init__.py +30 -3
- scitex/db/__main__.py +75 -0
- scitex/db/_check_health.py +381 -0
- scitex/db/_delete_duplicates.py +25 -386
- scitex/db/_inspect.py +335 -114
- scitex/db/_inspect_optimized.py +301 -0
- scitex/db/{_PostgreSQL.py → _postgresql/_PostgreSQL.py} +3 -3
- scitex/db/{_PostgreSQLMixins → _postgresql/_PostgreSQLMixins}/_BackupMixin.py +1 -1
- scitex/db/{_PostgreSQLMixins → _postgresql/_PostgreSQLMixins}/_BatchMixin.py +1 -1
- scitex/db/{_PostgreSQLMixins → _postgresql/_PostgreSQLMixins}/_BlobMixin.py +1 -1
- scitex/db/{_PostgreSQLMixins → _postgresql/_PostgreSQLMixins}/_ConnectionMixin.py +1 -1
- scitex/db/{_PostgreSQLMixins → _postgresql/_PostgreSQLMixins}/_MaintenanceMixin.py +1 -1
- scitex/db/{_PostgreSQLMixins → _postgresql/_PostgreSQLMixins}/_QueryMixin.py +1 -1
- scitex/db/{_PostgreSQLMixins → _postgresql/_PostgreSQLMixins}/_SchemaMixin.py +1 -1
- scitex/db/{_PostgreSQLMixins → _postgresql/_PostgreSQLMixins}/_TransactionMixin.py +1 -1
- scitex/db/_postgresql/__init__.py +6 -0
- scitex/db/_sqlite3/_SQLite3.py +210 -0
- scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin.py +581 -0
- scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin_v01-need-_hash-col.py +517 -0
- scitex/db/{_SQLite3Mixins → _sqlite3/_SQLite3Mixins}/_BatchMixin.py +1 -1
- scitex/db/_sqlite3/_SQLite3Mixins/_BlobMixin.py +281 -0
- scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin.py +548 -0
- scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin_v01-indentation-issues.py +583 -0
- scitex/db/{_SQLite3Mixins → _sqlite3/_SQLite3Mixins}/_ConnectionMixin.py +29 -13
- scitex/db/_sqlite3/_SQLite3Mixins/_GitMixin.py +583 -0
- scitex/db/{_SQLite3Mixins → _sqlite3/_SQLite3Mixins}/_ImportExportMixin.py +1 -1
- scitex/db/{_SQLite3Mixins → _sqlite3/_SQLite3Mixins}/_IndexMixin.py +1 -1
- scitex/db/{_SQLite3Mixins → _sqlite3/_SQLite3Mixins}/_MaintenanceMixin.py +2 -1
- scitex/db/{_SQLite3Mixins → _sqlite3/_SQLite3Mixins}/_QueryMixin.py +37 -10
- scitex/db/{_SQLite3Mixins → _sqlite3/_SQLite3Mixins}/_RowMixin.py +46 -6
- scitex/db/{_SQLite3Mixins → _sqlite3/_SQLite3Mixins}/_TableMixin.py +56 -10
- scitex/db/{_SQLite3Mixins → _sqlite3/_SQLite3Mixins}/_TransactionMixin.py +1 -1
- scitex/db/{_SQLite3Mixins → _sqlite3/_SQLite3Mixins}/__init__.py +14 -2
- scitex/db/_sqlite3/__init__.py +7 -0
- scitex/db/_sqlite3/_delete_duplicates.py +274 -0
- scitex/decorators/__init__.py +2 -0
- scitex/decorators/_cache_disk.py +13 -5
- scitex/decorators/_cache_disk_async.py +49 -0
- scitex/decorators/_deprecated.py +175 -10
- scitex/decorators/_timeout.py +1 -1
- scitex/dev/_analyze_code_flow.py +2 -2
- scitex/dict/_DotDict.py +73 -15
- scitex/dict/_DotDict_v01-not-handling-recursive-instantiations.py +442 -0
- scitex/dict/_DotDict_v02-not-serializing-Path-object.py +446 -0
- scitex/dict/__init__.py +2 -0
- scitex/dict/_flatten.py +27 -0
- scitex/dsp/_crop.py +2 -2
- scitex/dsp/_demo_sig.py +2 -2
- scitex/dsp/_detect_ripples.py +2 -2
- scitex/dsp/_hilbert.py +2 -2
- scitex/dsp/_listen.py +6 -6
- scitex/dsp/_modulation_index.py +2 -2
- scitex/dsp/_pac.py +1 -1
- scitex/dsp/_psd.py +2 -2
- scitex/dsp/_resample.py +2 -1
- scitex/dsp/_time.py +3 -2
- scitex/dsp/_wavelet.py +3 -2
- scitex/dsp/add_noise.py +2 -2
- scitex/dsp/example.py +1 -0
- scitex/dsp/filt.py +10 -9
- scitex/dsp/template.py +3 -2
- scitex/dsp/utils/_differential_bandpass_filters.py +1 -1
- scitex/dsp/utils/pac.py +2 -2
- scitex/dt/_normalize_timestamp.py +432 -0
- scitex/errors.py +572 -0
- scitex/gen/_DimHandler.py +2 -2
- scitex/gen/__init__.py +37 -7
- scitex/gen/_deprecated_close.py +80 -0
- scitex/gen/_deprecated_start.py +26 -0
- scitex/gen/_detect_environment.py +152 -0
- scitex/gen/_detect_notebook_path.py +169 -0
- scitex/gen/_embed.py +6 -2
- scitex/gen/_get_notebook_path.py +257 -0
- scitex/gen/_less.py +1 -1
- scitex/gen/_list_packages.py +2 -2
- scitex/gen/_norm.py +44 -9
- scitex/gen/_norm_cache.py +269 -0
- scitex/gen/_src.py +3 -5
- scitex/gen/_title_case.py +3 -3
- scitex/io/__init__.py +28 -6
- scitex/io/_glob.py +13 -7
- scitex/io/_load.py +108 -21
- scitex/io/_load_cache.py +303 -0
- scitex/io/_load_configs.py +40 -15
- scitex/io/{_H5Explorer.py → _load_modules/_H5Explorer.py} +80 -17
- scitex/io/_load_modules/_ZarrExplorer.py +114 -0
- scitex/io/_load_modules/_bibtex.py +207 -0
- scitex/io/_load_modules/_hdf5.py +53 -178
- scitex/io/_load_modules/_json.py +5 -3
- scitex/io/_load_modules/_pdf.py +871 -16
- scitex/io/_load_modules/_sqlite3.py +15 -0
- scitex/io/_load_modules/_txt.py +41 -12
- scitex/io/_load_modules/_yaml.py +4 -3
- scitex/io/_load_modules/_zarr.py +126 -0
- scitex/io/_save.py +429 -171
- scitex/io/_save_modules/__init__.py +6 -0
- scitex/io/_save_modules/_bibtex.py +194 -0
- scitex/io/_save_modules/_csv.py +8 -4
- scitex/io/_save_modules/_excel.py +174 -15
- scitex/io/_save_modules/_hdf5.py +251 -226
- scitex/io/_save_modules/_image.py +1 -3
- scitex/io/_save_modules/_json.py +49 -4
- scitex/io/_save_modules/_listed_dfs_as_csv.py +1 -3
- scitex/io/_save_modules/_listed_scalars_as_csv.py +1 -3
- scitex/io/_save_modules/_tex.py +277 -0
- scitex/io/_save_modules/_yaml.py +42 -3
- scitex/io/_save_modules/_zarr.py +160 -0
- scitex/io/utils/__init__.py +20 -0
- scitex/io/utils/h5_to_zarr.py +616 -0
- scitex/linalg/_geometric_median.py +6 -2
- scitex/{gen/_tee.py → logging/_Tee.py} +43 -84
- scitex/logging/__init__.py +122 -0
- scitex/logging/_config.py +158 -0
- scitex/logging/_context.py +103 -0
- scitex/logging/_formatters.py +128 -0
- scitex/logging/_handlers.py +64 -0
- scitex/logging/_levels.py +35 -0
- scitex/logging/_logger.py +163 -0
- scitex/logging/_print_capture.py +95 -0
- scitex/ml/__init__.py +69 -0
- scitex/{ai/genai/anthropic.py → ml/_gen_ai/_Anthropic.py} +13 -19
- scitex/{ai/genai/base_genai.py → ml/_gen_ai/_BaseGenAI.py} +5 -5
- scitex/{ai/genai/deepseek.py → ml/_gen_ai/_DeepSeek.py} +11 -16
- scitex/{ai/genai/google.py → ml/_gen_ai/_Google.py} +7 -15
- scitex/{ai/genai/groq.py → ml/_gen_ai/_Groq.py} +1 -8
- scitex/{ai/genai/llama.py → ml/_gen_ai/_Llama.py} +3 -16
- scitex/{ai/genai/openai.py → ml/_gen_ai/_OpenAI.py} +3 -3
- scitex/{ai/genai/params.py → ml/_gen_ai/_PARAMS.py} +51 -65
- scitex/{ai/genai/perplexity.py → ml/_gen_ai/_Perplexity.py} +3 -14
- scitex/ml/_gen_ai/__init__.py +43 -0
- scitex/{ai/genai/calc_cost.py → ml/_gen_ai/_calc_cost.py} +1 -1
- scitex/{ai/genai/format_output_func.py → ml/_gen_ai/_format_output_func.py} +4 -4
- scitex/{ai/genai/genai_factory.py → ml/_gen_ai/_genai_factory.py} +8 -8
- scitex/ml/activation/__init__.py +8 -0
- scitex/ml/activation/_define.py +11 -0
- scitex/{ai/classifier_server.py → ml/classification/Classifier.py} +5 -5
- scitex/ml/classification/CrossValidationExperiment.py +374 -0
- scitex/ml/classification/__init__.py +46 -0
- scitex/ml/classification/reporters/_BaseClassificationReporter.py +281 -0
- scitex/ml/classification/reporters/_ClassificationReporter.py +773 -0
- scitex/ml/classification/reporters/_MultiClassificationReporter.py +406 -0
- scitex/ml/classification/reporters/_SingleClassificationReporter.py +1834 -0
- scitex/ml/classification/reporters/__init__.py +11 -0
- scitex/ml/classification/reporters/reporter_utils/_Plotter.py +1028 -0
- scitex/ml/classification/reporters/reporter_utils/__init__.py +80 -0
- scitex/ml/classification/reporters/reporter_utils/aggregation.py +457 -0
- scitex/ml/classification/reporters/reporter_utils/data_models.py +313 -0
- scitex/ml/classification/reporters/reporter_utils/reporting.py +1056 -0
- scitex/ml/classification/reporters/reporter_utils/storage.py +221 -0
- scitex/ml/classification/reporters/reporter_utils/validation.py +395 -0
- scitex/ml/classification/timeseries/_TimeSeriesBlockingSplit.py +568 -0
- scitex/ml/classification/timeseries/_TimeSeriesCalendarSplit.py +688 -0
- scitex/ml/classification/timeseries/_TimeSeriesMetadata.py +139 -0
- scitex/ml/classification/timeseries/_TimeSeriesSlidingWindowSplit.py +1716 -0
- scitex/ml/classification/timeseries/_TimeSeriesSlidingWindowSplit_v01-not-using-n_splits.py +1685 -0
- scitex/ml/classification/timeseries/_TimeSeriesStrategy.py +84 -0
- scitex/ml/classification/timeseries/_TimeSeriesStratifiedSplit.py +610 -0
- scitex/ml/classification/timeseries/__init__.py +39 -0
- scitex/ml/classification/timeseries/_normalize_timestamp.py +436 -0
- scitex/ml/clustering/__init__.py +11 -0
- scitex/ml/clustering/_pca.py +115 -0
- scitex/ml/clustering/_umap.py +376 -0
- scitex/ml/feature_extraction/__init__.py +56 -0
- scitex/ml/feature_extraction/vit.py +149 -0
- scitex/ml/feature_selection/__init__.py +30 -0
- scitex/ml/feature_selection/feature_selection.py +364 -0
- scitex/ml/loss/_L1L2Losses.py +34 -0
- scitex/ml/loss/__init__.py +12 -0
- scitex/ml/loss/multi_task_loss.py +47 -0
- scitex/ml/metrics/__init__.py +56 -0
- scitex/ml/metrics/_calc_bacc.py +61 -0
- scitex/ml/metrics/_calc_bacc_from_conf_mat.py +38 -0
- scitex/ml/metrics/_calc_clf_report.py +78 -0
- scitex/ml/metrics/_calc_conf_mat.py +93 -0
- scitex/ml/metrics/_calc_feature_importance.py +183 -0
- scitex/ml/metrics/_calc_mcc.py +61 -0
- scitex/ml/metrics/_calc_pre_rec_auc.py +116 -0
- scitex/ml/metrics/_calc_roc_auc.py +110 -0
- scitex/ml/metrics/_calc_seizure_prediction_metrics.py +490 -0
- scitex/ml/metrics/_calc_silhouette_score.py +503 -0
- scitex/ml/metrics/_normalize_labels.py +83 -0
- scitex/ml/optim/Ranger_Deep_Learning_Optimizer/__init__.py +0 -0
- scitex/ml/optim/Ranger_Deep_Learning_Optimizer/ranger/__init__.py +3 -0
- scitex/ml/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger.py +207 -0
- scitex/ml/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger2020.py +238 -0
- scitex/ml/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger913A.py +215 -0
- scitex/ml/optim/Ranger_Deep_Learning_Optimizer/ranger/rangerqh.py +184 -0
- scitex/ml/optim/Ranger_Deep_Learning_Optimizer/setup.py +24 -0
- scitex/ml/optim/__init__.py +13 -0
- scitex/ml/optim/_get_set.py +31 -0
- scitex/ml/optim/_optimizers.py +71 -0
- scitex/ml/plt/__init__.py +60 -0
- scitex/ml/plt/_plot_conf_mat.py +663 -0
- scitex/ml/plt/_plot_feature_importance.py +323 -0
- scitex/ml/plt/_plot_learning_curve.py +345 -0
- scitex/ml/plt/_plot_optuna_study.py +225 -0
- scitex/ml/plt/_plot_pre_rec_curve.py +290 -0
- scitex/ml/plt/_plot_roc_curve.py +255 -0
- scitex/ml/sk/__init__.py +11 -0
- scitex/ml/sk/_clf.py +58 -0
- scitex/ml/sk/_to_sktime.py +100 -0
- scitex/ml/sklearn/__init__.py +26 -0
- scitex/ml/sklearn/clf.py +58 -0
- scitex/ml/sklearn/to_sktime.py +100 -0
- scitex/{ai/training/early_stopping.py → ml/training/_EarlyStopping.py} +1 -2
- scitex/{ai → ml/training}/_LearningCurveLogger.py +198 -242
- scitex/ml/training/__init__.py +7 -0
- scitex/ml/utils/__init__.py +22 -0
- scitex/ml/utils/_check_params.py +50 -0
- scitex/ml/utils/_default_dataset.py +46 -0
- scitex/ml/utils/_format_samples_for_sktime.py +26 -0
- scitex/ml/utils/_label_encoder.py +134 -0
- scitex/ml/utils/_merge_labels.py +22 -0
- scitex/ml/utils/_sliding_window_data_augmentation.py +11 -0
- scitex/ml/utils/_under_sample.py +51 -0
- scitex/ml/utils/_verify_n_gpus.py +16 -0
- scitex/ml/utils/grid_search.py +148 -0
- scitex/nn/_BNet.py +15 -9
- scitex/nn/_Filters.py +2 -2
- scitex/nn/_ModulationIndex.py +2 -2
- scitex/nn/_PAC.py +1 -1
- scitex/nn/_Spectrogram.py +12 -3
- scitex/nn/__init__.py +9 -10
- scitex/path/__init__.py +18 -0
- scitex/path/_clean.py +4 -0
- scitex/path/_find.py +9 -4
- scitex/path/_symlink.py +348 -0
- scitex/path/_version.py +4 -3
- scitex/pd/__init__.py +2 -0
- scitex/pd/_get_unique.py +99 -0
- scitex/plt/__init__.py +114 -5
- scitex/plt/_subplots/_AxesWrapper.py +1 -3
- scitex/plt/_subplots/_AxisWrapper.py +7 -3
- scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin.py +47 -13
- scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin.py +160 -2
- scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin.py +26 -4
- scitex/plt/_subplots/_AxisWrapperMixins/_UnitAwareMixin.py +322 -0
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- /scitex/{stats → stats_v01}/_multiple_corrections.py +0 -0
- /scitex/{stats → stats_v01}/_nan_stats.py +0 -0
- /scitex/{stats → stats_v01}/_p2stars_wrapper.py +0 -0
- /scitex/{stats → stats_v01}/_statistical_tests.py +0 -0
- /scitex/{stats/desc/_describe.py → stats_v01/desc/_describe_v01-20250920_145731.py} +0 -0
- /scitex/{stats/desc/_real.py → stats_v01/desc/_real_v01-20250920_145731.py} +0 -0
- /scitex/{stats → stats_v01}/multiple/__init__.py +0 -0
- /scitex/{stats → stats_v01}/multiple/_bonferroni_correction.py +0 -0
- /scitex/{stats → stats_v01}/multiple/_fdr_correction.py +0 -0
- /scitex/{stats → stats_v01}/multiple/_multicompair.py +0 -0
- /scitex/{stats → stats_v01}/tests/__corr_test.py +0 -0
- /scitex/{stats → stats_v01}/tests/__corr_test_multi.py +0 -0
- /scitex/{stats → stats_v01}/tests/__corr_test_single.py +0 -0
- /scitex/{stats → stats_v01}/tests/__init__.py +0 -0
- /scitex/{stats → stats_v01}/tests/_brunner_munzel_test.py +0 -0
- /scitex/{stats → stats_v01}/tests/_nocorrelation_test.py +0 -0
- /scitex/{stats → stats_v01}/tests/_smirnov_grubbs.py +0 -0
- {scitex-2.0.0.dist-info → scitex-2.1.0.dist-info}/top_level.txt +0 -0
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#!/usr/bin/env python3
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# -*- coding: utf-8 -*-
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# Timestamp: "2025-10-19 05:20:00 (ywatanabe)"
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# File: ./src/scitex/browser/collaboration/shared_session.py
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# ----------------------------------------
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"""
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SharedBrowserSession - Persistent browser session for AI-human collaboration.
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Inspired by scitex.scholar.browser.ScholarBrowserManager's persistent context pattern.
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Key features:
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- Persistent browser that stays open
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- Session continuity (cookies, auth persist)
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- Multiple participants can use same browser
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- Screenshots integrated with scitex.capture
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"""
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import asyncio
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import os
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import time
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from datetime import datetime
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from pathlib import Path
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from typing import Optional, List, Callable
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from dataclasses import dataclass, field
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from playwright.async_api import async_playwright, Browser, BrowserContext, Page
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@dataclass
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class SessionConfig:
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"""Configuration for shared browser session."""
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session_id: str = "default"
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browser_type: str = "chromium" # chromium, firefox, webkit
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headless: bool = False # False so humans can see
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viewport: dict = field(default_factory=lambda: {"width": 1920, "height": 1080})
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user_data_dir: Optional[str] = None # For persistent profile
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enable_screenshots: bool = True
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screenshot_interval: Optional[float] = None # Auto-screenshot every N seconds
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class SharedBrowserSession:
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"""
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Persistent browser session shared between AI agents and humans.
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Simple, incremental start - just the basics.
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Example:
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# Start session
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session = SharedBrowserSession()
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await session.start()
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# Navigate
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await session.navigate("http://127.0.0.1:8000")
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# Take screenshot
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screenshot = await session.screenshot()
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# Keep running
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await session.wait()
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# Close when done
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await session.close()
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"""
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def __init__(self, config: Optional[SessionConfig] = None):
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"""Initialize shared session."""
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self.config = config or SessionConfig()
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# Browser state
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self.playwright = None
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self.browser: Optional[Browser] = None
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self.context: Optional[BrowserContext] = None
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self.page: Optional[Page] = None
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# Session state
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self.running = False
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self.start_time = None
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# Simple event log
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self.events: List[dict] = []
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self.screenshots: List[str] = []
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# Get screenshot directory from SCITEX_DIR
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scitex_dir = Path(os.getenv("SCITEX_DIR", Path.home() / ".scitex"))
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self.screenshot_dir = scitex_dir / "capture"
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self.screenshot_dir.mkdir(parents=True, exist_ok=True)
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async def start(self):
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"""
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Start the persistent browser session.
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Uses persistent context pattern from ScholarBrowserManager.
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"""
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if self.running:
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raise RuntimeError("Session already running")
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# Get user data directory
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if self.config.user_data_dir:
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user_data_dir = self.config.user_data_dir
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else:
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scitex_dir = Path(os.getenv("SCITEX_DIR", Path.home() / ".scitex"))
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user_data_dir = str(scitex_dir / "browser" / "sessions" / self.config.session_id)
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# Start playwright
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self.playwright = await async_playwright().start()
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# Launch persistent context (like ScholarBrowserManager)
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browser_type = getattr(self.playwright, self.config.browser_type)
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self.context = await browser_type.launch_persistent_context(
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user_data_dir=user_data_dir,
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headless=self.config.headless,
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viewport=self.config.viewport,
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)
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# Get or create page
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if self.context.pages:
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self.page = self.context.pages[0]
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else:
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self.page = await self.context.new_page()
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self.running = True
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self.start_time = time.time()
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# Log event
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self._log_event("session_started", {
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"session_id": self.config.session_id,
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"user_data_dir": user_data_dir,
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})
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print(f"✅ Shared browser session started: {self.config.session_id}")
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print(f" User data: {user_data_dir}")
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print(f" Screenshots: {self.screenshot_dir}")
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# Start auto-screenshot if configured
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if self.config.screenshot_interval:
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asyncio.create_task(self._auto_screenshot_loop())
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async def navigate(self, url: str, wait_until: str = "load", timeout: int = 60000) -> str:
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"""
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Navigate to URL.
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Args:
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url: URL to navigate to
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wait_until: "load", "domcontentloaded", or "networkidle" (default: "load")
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timeout: Timeout in milliseconds (default: 60000)
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Returns:
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Current URL after navigation
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"""
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if not self.running:
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raise RuntimeError("Session not started. Call start() first.")
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await self.page.goto(url, wait_until=wait_until, timeout=timeout)
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self._log_event("navigated", {"url": url})
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return self.page.url
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async def screenshot(self, message: str = "") -> str:
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"""
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Take screenshot and save to scitex.capture directory.
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Returns:
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Path to screenshot file
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"""
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if not self.running:
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raise RuntimeError("Session not started. Call start() first.")
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# Generate filename
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timestamp = datetime.now().strftime("%Y%m%d_%H%M%S_%f")[:-3]
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url_slug = self.page.url.replace("://", "_").replace("/", "_").replace("?", "_")
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if len(url_slug) > 50:
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url_slug = url_slug[:50]
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if message:
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filename = f"{timestamp}-{self.config.session_id}-{message}.jpg"
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else:
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filename = f"{timestamp}-{self.config.session_id}-{url_slug}.jpg"
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screenshot_path = self.screenshot_dir / filename
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# Take screenshot (JPEG format supports quality)
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await self.page.screenshot(
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path=str(screenshot_path),
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type="jpeg",
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quality=90,
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)
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self.screenshots.append(str(screenshot_path))
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self._log_event("screenshot_taken", {"path": str(screenshot_path)})
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return str(screenshot_path)
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async def wait(self, duration: Optional[float] = None):
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"""
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Wait for duration or until stopped.
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Args:
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duration: Seconds to wait, or None to wait indefinitely
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"""
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if duration:
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await asyncio.sleep(duration)
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else:
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# Wait until closed
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while self.running:
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await asyncio.sleep(1)
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async def close(self):
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"""Close the session."""
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if not self.running:
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return
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self.running = False
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# Close page and context
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if self.page:
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await self.page.close()
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if self.context:
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await self.context.close()
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if self.playwright:
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await self.playwright.stop()
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duration = time.time() - self.start_time if self.start_time else 0
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self._log_event("session_closed", {
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"duration": duration,
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"screenshot_count": len(self.screenshots),
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})
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print(f"✅ Shared browser session closed: {self.config.session_id}")
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print(f" Duration: {duration:.1f}s")
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print(f" Screenshots: {len(self.screenshots)}")
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async def __aenter__(self):
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"""Context manager entry."""
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await self.start()
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return self
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async def __aexit__(self, *args):
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"""Context manager exit."""
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await self.close()
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def _log_event(self, event_type: str, data: dict):
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"""Simple event logging."""
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event = {
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"type": event_type,
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"data": data,
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"timestamp": time.time(),
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}
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self.events.append(event)
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async def _auto_screenshot_loop(self):
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"""Automatically take screenshots at intervals."""
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while self.running:
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try:
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await self.screenshot(message="auto")
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await asyncio.sleep(self.config.screenshot_interval)
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except Exception as e:
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print(f"Auto-screenshot error: {e}")
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def get_info(self) -> dict:
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"""Get session information."""
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return {
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"session_id": self.config.session_id,
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"running": self.running,
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"current_url": self.page.url if self.page else None,
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"uptime": time.time() - self.start_time if self.start_time else 0,
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"screenshot_count": len(self.screenshots),
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"event_count": len(self.events),
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}
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# ========================================
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# Natural Human-Like Interaction Primitives
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# ========================================
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async def type(self, selector: str, text: str, delay: int = 50):
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"""Type text like a human (with delay between keys)."""
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if not self.running:
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raise RuntimeError("Session not started")
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await self.page.type(selector, text, delay=delay)
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self._log_event("typed", {"selector": selector, "text": text})
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async def click(self, selector: str):
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"""Click element."""
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if not self.running:
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raise RuntimeError("Session not started")
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await self.page.click(selector)
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self._log_event("clicked", {"selector": selector})
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async def hover(self, selector: str):
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"""Hover over element."""
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await self.page.hover(selector)
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async def press(self, key: str):
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"""Press keyboard key (Enter, Tab, Escape, etc.)."""
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await self.page.keyboard.press(key)
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self._log_event("pressed_key", {"key": key})
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async def scroll_down(self, amount: int = 500):
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"""Scroll down."""
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await self.page.evaluate(f"window.scrollBy(0, {amount})")
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async def scroll_to(self, selector: str):
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"""Scroll element into view."""
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await self.page.locator(selector).scroll_into_view_if_needed()
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async def wait_for(self, selector: str, timeout: int = 5000):
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"""Wait for element to appear."""
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await self.page.wait_for_selector(selector, timeout=timeout)
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async def wait_for_text(self, text: str, timeout: int = 5000):
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"""Wait for text to appear."""
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await self.page.wait_for_selector(f"text={text}", timeout=timeout)
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async def wait_for_url(self, pattern: str, timeout: int = 5000):
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"""Wait for URL to match pattern."""
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await self.page.wait_for_url(pattern, timeout=timeout)
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async def get_text(self, selector: str) -> str:
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"""Get text content of element."""
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element = await self.page.query_selector(selector)
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return await element.text_content() if element else ""
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async def get_value(self, selector: str) -> str:
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"""Get value of input element."""
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return await self.page.input_value(selector)
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async def is_visible(self, selector: str) -> bool:
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"""Check if element is visible."""
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return await self.page.is_visible(selector)
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# ========================================
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# Interactive Prompts (Ask User in Browser)
|
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# ========================================
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async def ask(self, question: str, options: Optional[List[str]] = None) -> str:
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"""
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Ask user a question in the browser.
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|
|
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Returns user's response.
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|
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Example:
|
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|
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response = await session.ask("What username to use?")
|
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|
+
response = await session.ask("Choose:", ["Option A", "Option B"])
|
|
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|
+
"""
|
|
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|
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if options:
|
|
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# Multiple choice
|
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result = await self.page.evaluate(f"""
|
|
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|
+
() => {{
|
|
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|
+
const choice = prompt('{question}\\n\\nOptions: {", ".join(options)}');
|
|
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|
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return choice;
|
|
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|
+
}}
|
|
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|
+
""")
|
|
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else:
|
|
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|
+
# Free text
|
|
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|
+
result = await self.page.evaluate(f"""
|
|
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|
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() => prompt('{question}')
|
|
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|
+
""")
|
|
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|
+
|
|
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|
+
self._log_event("user_input", {"question": question, "response": result})
|
|
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|
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return result
|
|
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|
+
|
|
368
|
+
async def confirm(self, message: str) -> bool:
|
|
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|
+
"""
|
|
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|
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Ask user for confirmation in browser.
|
|
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|
+
|
|
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|
+
Returns True if user clicks OK, False if Cancel.
|
|
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|
+
"""
|
|
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|
+
result = await self.page.evaluate(f"""
|
|
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|
+
() => confirm('{message}')
|
|
376
|
+
""")
|
|
377
|
+
|
|
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|
+
self._log_event("user_confirmation", {"message": message, "confirmed": result})
|
|
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|
+
return result
|
|
380
|
+
|
|
381
|
+
|
|
382
|
+
# EOF
|
|
383
|
+
|
|
@@ -0,0 +1,246 @@
|
|
|
1
|
+
#!/usr/bin/env python3
|
|
2
|
+
# -*- coding: utf-8 -*-
|
|
3
|
+
# Timestamp: "2025-10-19 06:18:00 (ywatanabe)"
|
|
4
|
+
# File: ./src/scitex/browser/collaboration/standard_interactions.py
|
|
5
|
+
# ----------------------------------------
|
|
6
|
+
"""
|
|
7
|
+
Standardized user interaction patterns for smooth AI-human collaboration.
|
|
8
|
+
|
|
9
|
+
Provides consistent, reusable interaction patterns.
|
|
10
|
+
"""
|
|
11
|
+
|
|
12
|
+
from enum import Enum
|
|
13
|
+
from typing import Optional, Any
|
|
14
|
+
from playwright.async_api import Page
|
|
15
|
+
|
|
16
|
+
|
|
17
|
+
class UserResponse(Enum):
|
|
18
|
+
"""Standardized user responses."""
|
|
19
|
+
YES = "yes"
|
|
20
|
+
NO = "no"
|
|
21
|
+
ACCEPT = "accept"
|
|
22
|
+
REJECT = "reject"
|
|
23
|
+
SKIP = "skip"
|
|
24
|
+
RETRY = "retry"
|
|
25
|
+
CANCEL = "cancel"
|
|
26
|
+
MEMORIZE_SESSION = "memorize_session" # Remember for this session
|
|
27
|
+
MEMORIZE_PERSISTENT = "memorize_persistent" # Remember forever
|
|
28
|
+
HINT = "hint" # Show me a hint
|
|
29
|
+
HELP = "help" # Show help
|
|
30
|
+
CUSTOM = "custom" # User provides custom input
|
|
31
|
+
|
|
32
|
+
|
|
33
|
+
class StandardInteractions:
|
|
34
|
+
"""
|
|
35
|
+
Standardized interaction patterns.
|
|
36
|
+
|
|
37
|
+
Makes AI-human communication smooth and predictable.
|
|
38
|
+
"""
|
|
39
|
+
|
|
40
|
+
def __init__(self, page: Page):
|
|
41
|
+
self.page = page
|
|
42
|
+
self.initialized = False
|
|
43
|
+
|
|
44
|
+
async def initialize(self):
|
|
45
|
+
"""Initialize standard interactions UI."""
|
|
46
|
+
if self.initialized:
|
|
47
|
+
return
|
|
48
|
+
|
|
49
|
+
await self.page.add_init_script("""
|
|
50
|
+
() => {
|
|
51
|
+
window.scitexStandard = {
|
|
52
|
+
// Show choice dialog with standard options
|
|
53
|
+
askChoice: function(question, options) {
|
|
54
|
+
return new Promise((resolve) => {
|
|
55
|
+
const overlay = document.createElement('div');
|
|
56
|
+
overlay.id = 'scitex-choice-overlay';
|
|
57
|
+
overlay.style.cssText = `
|
|
58
|
+
position: fixed;
|
|
59
|
+
top: 0;
|
|
60
|
+
left: 0;
|
|
61
|
+
right: 0;
|
|
62
|
+
bottom: 0;
|
|
63
|
+
background: rgba(0, 0, 0, 0.5);
|
|
64
|
+
z-index: 2147483647;
|
|
65
|
+
display: flex;
|
|
66
|
+
align-items: center;
|
|
67
|
+
justify-content: center;
|
|
68
|
+
`;
|
|
69
|
+
|
|
70
|
+
const dialog = document.createElement('div');
|
|
71
|
+
dialog.style.cssText = `
|
|
72
|
+
background: white;
|
|
73
|
+
padding: 24px;
|
|
74
|
+
border-radius: 12px;
|
|
75
|
+
box-shadow: 0 8px 32px rgba(0,0,0,0.3);
|
|
76
|
+
max-width: 500px;
|
|
77
|
+
width: 90%;
|
|
78
|
+
`;
|
|
79
|
+
|
|
80
|
+
const questionEl = document.createElement('div');
|
|
81
|
+
questionEl.style.cssText = `
|
|
82
|
+
font-size: 16px;
|
|
83
|
+
font-weight: 500;
|
|
84
|
+
margin-bottom: 20px;
|
|
85
|
+
color: #333;
|
|
86
|
+
`;
|
|
87
|
+
questionEl.textContent = question;
|
|
88
|
+
|
|
89
|
+
const buttonsContainer = document.createElement('div');
|
|
90
|
+
buttonsContainer.style.cssText = `
|
|
91
|
+
display: grid;
|
|
92
|
+
grid-template-columns: repeat(auto-fit, minmax(120px, 1fr));
|
|
93
|
+
gap: 8px;
|
|
94
|
+
`;
|
|
95
|
+
|
|
96
|
+
const buttonStyles = {
|
|
97
|
+
yes: { bg: '#4CAF50', text: '✓ Yes' },
|
|
98
|
+
no: { bg: '#F44336', text: '✗ No' },
|
|
99
|
+
accept: { bg: '#4CAF50', text: '✓ Accept' },
|
|
100
|
+
reject: { bg: '#F44336', text: '✗ Reject' },
|
|
101
|
+
skip: { bg: '#9E9E9E', text: '→ Skip' },
|
|
102
|
+
retry: { bg: '#FF9800', text: '↻ Retry' },
|
|
103
|
+
cancel: { bg: '#757575', text: '✗ Cancel' },
|
|
104
|
+
memorize_session: { bg: '#2196F3', text: '💾 This Session' },
|
|
105
|
+
memorize_persistent: { bg: '#673AB7', text: '💾 Forever' },
|
|
106
|
+
hint: { bg: '#00BCD4', text: '💡 Hint' },
|
|
107
|
+
help: { bg: '#607D8B', text: '❓ Help' },
|
|
108
|
+
custom: { bg: '#795548', text: '✏️ Custom' },
|
|
109
|
+
};
|
|
110
|
+
|
|
111
|
+
options.forEach(option => {
|
|
112
|
+
const btn = document.createElement('button');
|
|
113
|
+
const style = buttonStyles[option] || { bg: '#9E9E9E', text: option };
|
|
114
|
+
|
|
115
|
+
btn.style.cssText = `
|
|
116
|
+
padding: 10px 16px;
|
|
117
|
+
background: ${style.bg};
|
|
118
|
+
color: white;
|
|
119
|
+
border: none;
|
|
120
|
+
border-radius: 6px;
|
|
121
|
+
cursor: pointer;
|
|
122
|
+
font-size: 13px;
|
|
123
|
+
font-weight: 500;
|
|
124
|
+
transition: transform 0.1s, box-shadow 0.1s;
|
|
125
|
+
`;
|
|
126
|
+
|
|
127
|
+
btn.textContent = style.text;
|
|
128
|
+
btn.value = option;
|
|
129
|
+
|
|
130
|
+
btn.onmouseover = () => {
|
|
131
|
+
btn.style.transform = 'translateY(-2px)';
|
|
132
|
+
btn.style.boxShadow = '0 4px 8px rgba(0,0,0,0.2)';
|
|
133
|
+
};
|
|
134
|
+
|
|
135
|
+
btn.onmouseout = () => {
|
|
136
|
+
btn.style.transform = 'translateY(0)';
|
|
137
|
+
btn.style.boxShadow = 'none';
|
|
138
|
+
};
|
|
139
|
+
|
|
140
|
+
btn.onclick = () => {
|
|
141
|
+
overlay.remove();
|
|
142
|
+
resolve(option);
|
|
143
|
+
};
|
|
144
|
+
|
|
145
|
+
buttonsContainer.appendChild(btn);
|
|
146
|
+
});
|
|
147
|
+
|
|
148
|
+
dialog.appendChild(questionEl);
|
|
149
|
+
dialog.appendChild(buttonsContainer);
|
|
150
|
+
overlay.appendChild(dialog);
|
|
151
|
+
document.body.appendChild(overlay);
|
|
152
|
+
});
|
|
153
|
+
},
|
|
154
|
+
|
|
155
|
+
// Quick yes/no
|
|
156
|
+
askYesNo: function(question) {
|
|
157
|
+
return this.askChoice(question, ['yes', 'no']);
|
|
158
|
+
},
|
|
159
|
+
|
|
160
|
+
// Accept/Reject with memory options
|
|
161
|
+
askWithMemory: function(question) {
|
|
162
|
+
return this.askChoice(question, [
|
|
163
|
+
'accept',
|
|
164
|
+
'reject',
|
|
165
|
+
'memorize_session',
|
|
166
|
+
'memorize_persistent'
|
|
167
|
+
]);
|
|
168
|
+
},
|
|
169
|
+
|
|
170
|
+
// Action approval
|
|
171
|
+
askApproval: function(action) {
|
|
172
|
+
return this.askChoice(`Approve: ${action}?`, [
|
|
173
|
+
'accept',
|
|
174
|
+
'reject',
|
|
175
|
+
'hint',
|
|
176
|
+
'custom'
|
|
177
|
+
]);
|
|
178
|
+
},
|
|
179
|
+
};
|
|
180
|
+
|
|
181
|
+
console.log('✅ Standard interactions initialized');
|
|
182
|
+
}
|
|
183
|
+
""")
|
|
184
|
+
|
|
185
|
+
self.initialized = True
|
|
186
|
+
print("✅ Standard interactions initialized")
|
|
187
|
+
|
|
188
|
+
async def ask_yes_no(self, question: str) -> bool:
|
|
189
|
+
"""
|
|
190
|
+
Ask yes/no question.
|
|
191
|
+
|
|
192
|
+
Returns:
|
|
193
|
+
True for yes, False for no
|
|
194
|
+
"""
|
|
195
|
+
result = await self.page.evaluate(
|
|
196
|
+
f"window.scitexStandard?.askYesNo('{self._escape_js(question)}')"
|
|
197
|
+
)
|
|
198
|
+
return result == "yes"
|
|
199
|
+
|
|
200
|
+
async def ask_choice(self, question: str, options: list) -> str:
|
|
201
|
+
"""
|
|
202
|
+
Ask user to choose from options.
|
|
203
|
+
|
|
204
|
+
Args:
|
|
205
|
+
question: Question to ask
|
|
206
|
+
options: List of option keys (yes, no, accept, etc.)
|
|
207
|
+
|
|
208
|
+
Returns:
|
|
209
|
+
Selected option key
|
|
210
|
+
"""
|
|
211
|
+
options_json = str(options).replace("'", '"')
|
|
212
|
+
result = await self.page.evaluate(
|
|
213
|
+
f"window.scitexStandard?.askChoice('{self._escape_js(question)}', {options_json})"
|
|
214
|
+
)
|
|
215
|
+
return result
|
|
216
|
+
|
|
217
|
+
async def ask_with_memory(self, question: str) -> str:
|
|
218
|
+
"""
|
|
219
|
+
Ask with memory options.
|
|
220
|
+
|
|
221
|
+
Returns:
|
|
222
|
+
'accept', 'reject', 'memorize_session', or 'memorize_persistent'
|
|
223
|
+
"""
|
|
224
|
+
result = await self.page.evaluate(
|
|
225
|
+
f"window.scitexStandard?.askWithMemory('{self._escape_js(question)}')"
|
|
226
|
+
)
|
|
227
|
+
return result
|
|
228
|
+
|
|
229
|
+
async def ask_approval(self, action: str) -> str:
|
|
230
|
+
"""
|
|
231
|
+
Ask approval for action.
|
|
232
|
+
|
|
233
|
+
Returns:
|
|
234
|
+
'accept', 'reject', 'hint', or 'custom'
|
|
235
|
+
"""
|
|
236
|
+
result = await self.page.evaluate(
|
|
237
|
+
f"window.scitexStandard?.askApproval('{self._escape_js(action)}')"
|
|
238
|
+
)
|
|
239
|
+
return result
|
|
240
|
+
|
|
241
|
+
def _escape_js(self, text: str) -> str:
|
|
242
|
+
"""Escape text for JavaScript."""
|
|
243
|
+
return text.replace("'", "\\'").replace("\n", "\\n")
|
|
244
|
+
|
|
245
|
+
|
|
246
|
+
# EOF
|