scipy 1.16.2__cp311-cp311-win_arm64.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scipy/__config__.py +161 -0
- scipy/__init__.py +150 -0
- scipy/_cyutility.cp311-win_arm64.lib +0 -0
- scipy/_cyutility.cp311-win_arm64.pyd +0 -0
- scipy/_distributor_init.py +18 -0
- scipy/_lib/__init__.py +14 -0
- scipy/_lib/_array_api.py +931 -0
- scipy/_lib/_array_api_compat_vendor.py +9 -0
- scipy/_lib/_array_api_no_0d.py +103 -0
- scipy/_lib/_bunch.py +229 -0
- scipy/_lib/_ccallback.py +251 -0
- scipy/_lib/_ccallback_c.cp311-win_arm64.lib +0 -0
- scipy/_lib/_ccallback_c.cp311-win_arm64.pyd +0 -0
- scipy/_lib/_disjoint_set.py +254 -0
- scipy/_lib/_docscrape.py +761 -0
- scipy/_lib/_elementwise_iterative_method.py +346 -0
- scipy/_lib/_fpumode.cp311-win_arm64.lib +0 -0
- scipy/_lib/_fpumode.cp311-win_arm64.pyd +0 -0
- scipy/_lib/_gcutils.py +105 -0
- scipy/_lib/_pep440.py +487 -0
- scipy/_lib/_sparse.py +41 -0
- scipy/_lib/_test_ccallback.cp311-win_arm64.lib +0 -0
- scipy/_lib/_test_ccallback.cp311-win_arm64.pyd +0 -0
- scipy/_lib/_test_deprecation_call.cp311-win_arm64.lib +0 -0
- scipy/_lib/_test_deprecation_call.cp311-win_arm64.pyd +0 -0
- scipy/_lib/_test_deprecation_def.cp311-win_arm64.lib +0 -0
- scipy/_lib/_test_deprecation_def.cp311-win_arm64.pyd +0 -0
- scipy/_lib/_testutils.py +373 -0
- scipy/_lib/_threadsafety.py +58 -0
- scipy/_lib/_tmpdirs.py +86 -0
- scipy/_lib/_uarray/LICENSE +29 -0
- scipy/_lib/_uarray/__init__.py +116 -0
- scipy/_lib/_uarray/_backend.py +707 -0
- scipy/_lib/_uarray/_uarray.cp311-win_arm64.lib +0 -0
- scipy/_lib/_uarray/_uarray.cp311-win_arm64.pyd +0 -0
- scipy/_lib/_util.py +1283 -0
- scipy/_lib/array_api_compat/__init__.py +22 -0
- scipy/_lib/array_api_compat/_internal.py +59 -0
- scipy/_lib/array_api_compat/common/__init__.py +1 -0
- scipy/_lib/array_api_compat/common/_aliases.py +727 -0
- scipy/_lib/array_api_compat/common/_fft.py +213 -0
- scipy/_lib/array_api_compat/common/_helpers.py +1058 -0
- scipy/_lib/array_api_compat/common/_linalg.py +232 -0
- scipy/_lib/array_api_compat/common/_typing.py +192 -0
- scipy/_lib/array_api_compat/cupy/__init__.py +13 -0
- scipy/_lib/array_api_compat/cupy/_aliases.py +156 -0
- scipy/_lib/array_api_compat/cupy/_info.py +336 -0
- scipy/_lib/array_api_compat/cupy/_typing.py +31 -0
- scipy/_lib/array_api_compat/cupy/fft.py +36 -0
- scipy/_lib/array_api_compat/cupy/linalg.py +49 -0
- scipy/_lib/array_api_compat/dask/__init__.py +0 -0
- scipy/_lib/array_api_compat/dask/array/__init__.py +12 -0
- scipy/_lib/array_api_compat/dask/array/_aliases.py +376 -0
- scipy/_lib/array_api_compat/dask/array/_info.py +416 -0
- scipy/_lib/array_api_compat/dask/array/fft.py +21 -0
- scipy/_lib/array_api_compat/dask/array/linalg.py +72 -0
- scipy/_lib/array_api_compat/numpy/__init__.py +28 -0
- scipy/_lib/array_api_compat/numpy/_aliases.py +190 -0
- scipy/_lib/array_api_compat/numpy/_info.py +366 -0
- scipy/_lib/array_api_compat/numpy/_typing.py +30 -0
- scipy/_lib/array_api_compat/numpy/fft.py +35 -0
- scipy/_lib/array_api_compat/numpy/linalg.py +143 -0
- scipy/_lib/array_api_compat/torch/__init__.py +22 -0
- scipy/_lib/array_api_compat/torch/_aliases.py +855 -0
- scipy/_lib/array_api_compat/torch/_info.py +369 -0
- scipy/_lib/array_api_compat/torch/_typing.py +3 -0
- scipy/_lib/array_api_compat/torch/fft.py +85 -0
- scipy/_lib/array_api_compat/torch/linalg.py +121 -0
- scipy/_lib/array_api_extra/__init__.py +38 -0
- scipy/_lib/array_api_extra/_delegation.py +171 -0
- scipy/_lib/array_api_extra/_lib/__init__.py +1 -0
- scipy/_lib/array_api_extra/_lib/_at.py +463 -0
- scipy/_lib/array_api_extra/_lib/_backends.py +46 -0
- scipy/_lib/array_api_extra/_lib/_funcs.py +937 -0
- scipy/_lib/array_api_extra/_lib/_lazy.py +357 -0
- scipy/_lib/array_api_extra/_lib/_testing.py +278 -0
- scipy/_lib/array_api_extra/_lib/_utils/__init__.py +1 -0
- scipy/_lib/array_api_extra/_lib/_utils/_compat.py +74 -0
- scipy/_lib/array_api_extra/_lib/_utils/_compat.pyi +45 -0
- scipy/_lib/array_api_extra/_lib/_utils/_helpers.py +559 -0
- scipy/_lib/array_api_extra/_lib/_utils/_typing.py +10 -0
- scipy/_lib/array_api_extra/_lib/_utils/_typing.pyi +105 -0
- scipy/_lib/array_api_extra/testing.py +359 -0
- scipy/_lib/cobyqa/__init__.py +20 -0
- scipy/_lib/cobyqa/framework.py +1240 -0
- scipy/_lib/cobyqa/main.py +1506 -0
- scipy/_lib/cobyqa/models.py +1529 -0
- scipy/_lib/cobyqa/problem.py +1296 -0
- scipy/_lib/cobyqa/settings.py +132 -0
- scipy/_lib/cobyqa/subsolvers/__init__.py +14 -0
- scipy/_lib/cobyqa/subsolvers/geometry.py +387 -0
- scipy/_lib/cobyqa/subsolvers/optim.py +1203 -0
- scipy/_lib/cobyqa/utils/__init__.py +18 -0
- scipy/_lib/cobyqa/utils/exceptions.py +22 -0
- scipy/_lib/cobyqa/utils/math.py +77 -0
- scipy/_lib/cobyqa/utils/versions.py +67 -0
- scipy/_lib/decorator.py +399 -0
- scipy/_lib/deprecation.py +274 -0
- scipy/_lib/doccer.py +366 -0
- scipy/_lib/messagestream.cp311-win_arm64.lib +0 -0
- scipy/_lib/messagestream.cp311-win_arm64.pyd +0 -0
- scipy/_lib/pyprima/__init__.py +212 -0
- scipy/_lib/pyprima/cobyla/__init__.py +0 -0
- scipy/_lib/pyprima/cobyla/cobyla.py +559 -0
- scipy/_lib/pyprima/cobyla/cobylb.py +714 -0
- scipy/_lib/pyprima/cobyla/geometry.py +226 -0
- scipy/_lib/pyprima/cobyla/initialize.py +215 -0
- scipy/_lib/pyprima/cobyla/trustregion.py +492 -0
- scipy/_lib/pyprima/cobyla/update.py +289 -0
- scipy/_lib/pyprima/common/__init__.py +0 -0
- scipy/_lib/pyprima/common/_bounds.py +34 -0
- scipy/_lib/pyprima/common/_linear_constraints.py +46 -0
- scipy/_lib/pyprima/common/_nonlinear_constraints.py +54 -0
- scipy/_lib/pyprima/common/_project.py +173 -0
- scipy/_lib/pyprima/common/checkbreak.py +93 -0
- scipy/_lib/pyprima/common/consts.py +47 -0
- scipy/_lib/pyprima/common/evaluate.py +99 -0
- scipy/_lib/pyprima/common/history.py +38 -0
- scipy/_lib/pyprima/common/infos.py +30 -0
- scipy/_lib/pyprima/common/linalg.py +435 -0
- scipy/_lib/pyprima/common/message.py +290 -0
- scipy/_lib/pyprima/common/powalg.py +131 -0
- scipy/_lib/pyprima/common/preproc.py +277 -0
- scipy/_lib/pyprima/common/present.py +5 -0
- scipy/_lib/pyprima/common/ratio.py +54 -0
- scipy/_lib/pyprima/common/redrho.py +47 -0
- scipy/_lib/pyprima/common/selectx.py +296 -0
- scipy/_lib/tests/__init__.py +0 -0
- scipy/_lib/tests/test__gcutils.py +110 -0
- scipy/_lib/tests/test__pep440.py +67 -0
- scipy/_lib/tests/test__testutils.py +32 -0
- scipy/_lib/tests/test__threadsafety.py +51 -0
- scipy/_lib/tests/test__util.py +641 -0
- scipy/_lib/tests/test_array_api.py +322 -0
- scipy/_lib/tests/test_bunch.py +169 -0
- scipy/_lib/tests/test_ccallback.py +196 -0
- scipy/_lib/tests/test_config.py +45 -0
- scipy/_lib/tests/test_deprecation.py +10 -0
- scipy/_lib/tests/test_doccer.py +143 -0
- scipy/_lib/tests/test_import_cycles.py +18 -0
- scipy/_lib/tests/test_public_api.py +482 -0
- scipy/_lib/tests/test_scipy_version.py +28 -0
- scipy/_lib/tests/test_tmpdirs.py +48 -0
- scipy/_lib/tests/test_warnings.py +137 -0
- scipy/_lib/uarray.py +31 -0
- scipy/cluster/__init__.py +31 -0
- scipy/cluster/_hierarchy.cp311-win_arm64.lib +0 -0
- scipy/cluster/_hierarchy.cp311-win_arm64.pyd +0 -0
- scipy/cluster/_optimal_leaf_ordering.cp311-win_arm64.lib +0 -0
- scipy/cluster/_optimal_leaf_ordering.cp311-win_arm64.pyd +0 -0
- scipy/cluster/_vq.cp311-win_arm64.lib +0 -0
- scipy/cluster/_vq.cp311-win_arm64.pyd +0 -0
- scipy/cluster/hierarchy.py +4348 -0
- scipy/cluster/tests/__init__.py +0 -0
- scipy/cluster/tests/hierarchy_test_data.py +145 -0
- scipy/cluster/tests/test_disjoint_set.py +202 -0
- scipy/cluster/tests/test_hierarchy.py +1238 -0
- scipy/cluster/tests/test_vq.py +434 -0
- scipy/cluster/vq.py +832 -0
- scipy/conftest.py +683 -0
- scipy/constants/__init__.py +358 -0
- scipy/constants/_codata.py +2266 -0
- scipy/constants/_constants.py +369 -0
- scipy/constants/codata.py +21 -0
- scipy/constants/constants.py +53 -0
- scipy/constants/tests/__init__.py +0 -0
- scipy/constants/tests/test_codata.py +78 -0
- scipy/constants/tests/test_constants.py +83 -0
- scipy/datasets/__init__.py +90 -0
- scipy/datasets/_download_all.py +71 -0
- scipy/datasets/_fetchers.py +225 -0
- scipy/datasets/_registry.py +26 -0
- scipy/datasets/_utils.py +81 -0
- scipy/datasets/tests/__init__.py +0 -0
- scipy/datasets/tests/test_data.py +128 -0
- scipy/differentiate/__init__.py +27 -0
- scipy/differentiate/_differentiate.py +1129 -0
- scipy/differentiate/tests/__init__.py +0 -0
- scipy/differentiate/tests/test_differentiate.py +694 -0
- scipy/fft/__init__.py +114 -0
- scipy/fft/_backend.py +196 -0
- scipy/fft/_basic.py +1650 -0
- scipy/fft/_basic_backend.py +197 -0
- scipy/fft/_debug_backends.py +22 -0
- scipy/fft/_fftlog.py +223 -0
- scipy/fft/_fftlog_backend.py +200 -0
- scipy/fft/_helper.py +348 -0
- scipy/fft/_pocketfft/LICENSE.md +25 -0
- scipy/fft/_pocketfft/__init__.py +9 -0
- scipy/fft/_pocketfft/basic.py +251 -0
- scipy/fft/_pocketfft/helper.py +249 -0
- scipy/fft/_pocketfft/pypocketfft.cp311-win_arm64.lib +0 -0
- scipy/fft/_pocketfft/pypocketfft.cp311-win_arm64.pyd +0 -0
- scipy/fft/_pocketfft/realtransforms.py +109 -0
- scipy/fft/_pocketfft/tests/__init__.py +0 -0
- scipy/fft/_pocketfft/tests/test_basic.py +1011 -0
- scipy/fft/_pocketfft/tests/test_real_transforms.py +505 -0
- scipy/fft/_realtransforms.py +706 -0
- scipy/fft/_realtransforms_backend.py +63 -0
- scipy/fft/tests/__init__.py +0 -0
- scipy/fft/tests/mock_backend.py +96 -0
- scipy/fft/tests/test_backend.py +98 -0
- scipy/fft/tests/test_basic.py +504 -0
- scipy/fft/tests/test_fftlog.py +215 -0
- scipy/fft/tests/test_helper.py +558 -0
- scipy/fft/tests/test_multithreading.py +84 -0
- scipy/fft/tests/test_real_transforms.py +247 -0
- scipy/fftpack/__init__.py +103 -0
- scipy/fftpack/_basic.py +428 -0
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- scipy/fftpack/_pseudo_diffs.py +554 -0
- scipy/fftpack/_realtransforms.py +598 -0
- scipy/fftpack/basic.py +20 -0
- scipy/fftpack/convolve.cp311-win_arm64.lib +0 -0
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- scipy/fftpack/pseudo_diffs.py +22 -0
- scipy/fftpack/realtransforms.py +19 -0
- scipy/fftpack/tests/__init__.py +0 -0
- scipy/fftpack/tests/fftw_double_ref.npz +0 -0
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- scipy/fftpack/tests/fftw_single_ref.npz +0 -0
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- scipy/fftpack/tests/test_helper.py +54 -0
- scipy/fftpack/tests/test_import.py +33 -0
- scipy/fftpack/tests/test_pseudo_diffs.py +388 -0
- scipy/fftpack/tests/test_real_transforms.py +836 -0
- scipy/integrate/__init__.py +122 -0
- scipy/integrate/_bvp.py +1160 -0
- scipy/integrate/_cubature.py +729 -0
- scipy/integrate/_dop.cp311-win_arm64.lib +0 -0
- scipy/integrate/_dop.cp311-win_arm64.pyd +0 -0
- scipy/integrate/_ivp/__init__.py +8 -0
- scipy/integrate/_ivp/base.py +290 -0
- scipy/integrate/_ivp/bdf.py +478 -0
- scipy/integrate/_ivp/common.py +451 -0
- scipy/integrate/_ivp/dop853_coefficients.py +193 -0
- scipy/integrate/_ivp/ivp.py +755 -0
- scipy/integrate/_ivp/lsoda.py +224 -0
- scipy/integrate/_ivp/radau.py +572 -0
- scipy/integrate/_ivp/rk.py +601 -0
- scipy/integrate/_ivp/tests/__init__.py +0 -0
- scipy/integrate/_ivp/tests/test_ivp.py +1287 -0
- scipy/integrate/_ivp/tests/test_rk.py +37 -0
- scipy/integrate/_lebedev.py +5450 -0
- scipy/integrate/_lsoda.cp311-win_arm64.lib +0 -0
- scipy/integrate/_lsoda.cp311-win_arm64.pyd +0 -0
- scipy/integrate/_ode.py +1395 -0
- scipy/integrate/_odepack.cp311-win_arm64.lib +0 -0
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- scipy/integrate/_quad_vec.py +674 -0
- scipy/integrate/_quadpack.cp311-win_arm64.lib +0 -0
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- scipy/integrate/_quadpack_py.py +1283 -0
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- scipy/integrate/_rules/__init__.py +12 -0
- scipy/integrate/_rules/_base.py +518 -0
- scipy/integrate/_rules/_gauss_kronrod.py +202 -0
- scipy/integrate/_rules/_gauss_legendre.py +62 -0
- scipy/integrate/_rules/_genz_malik.py +210 -0
- scipy/integrate/_tanhsinh.py +1385 -0
- scipy/integrate/_test_multivariate.cp311-win_arm64.lib +0 -0
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- scipy/integrate/tests/test_cubature.py +1375 -0
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- scipy/integrate/tests/test_quadrature.py +730 -0
- scipy/integrate/tests/test_tanhsinh.py +1171 -0
- scipy/integrate/vode.py +15 -0
- scipy/interpolate/__init__.py +228 -0
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- scipy/interpolate/_cubic.py +973 -0
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import operator
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Attributes
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Estimated root location.
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Number of times the function was called.
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Root finding method used.
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full_output=False, disp=True):
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Find a root of the scalar-valued function `func` given a nearby scalar
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starting point `x0`.
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is provided, otherwise the secant method is used. If the second order
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derivative `fprime2` of `func` is also provided, then Halley's method is
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then its return must also have the same shape: each element is the first
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(second) derivative of `func` with respect to its only variable evaluated
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at each element of its first argument.
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variable. For problems involving several variables, see `root`.
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----------
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func : callable
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The function whose root is wanted. It must be a function of a
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single variable of the form ``f(x,a,b,c...)``, where ``a,b,c...``
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are extra arguments that can be passed in the `args` parameter.
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x0 : float, sequence, or ndarray
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An initial estimate of the root that should be somewhere near the
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actual root. If not scalar, then `func` must be vectorized and return
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a sequence or array of the same shape as its first argument.
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The derivative of the function when available and convenient. If it
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is None (default), then the secant method is used.
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args : tuple, optional
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Extra arguments to be used in the function call.
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The allowable error of the root's value. If `func` is complex-valued,
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a larger `tol` is recommended as both the real and imaginary parts
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of `x` contribute to ``|x - x0|``.
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Maximum number of iterations.
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fprime2 : callable, optional
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The second order derivative of the function when available and
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convenient. If it is None (default), then the normal Newton-Raphson
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or the secant method is used. If it is not None, then Halley's method
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is used.
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+
x1 : float, optional
|
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+
Another estimate of the root that should be somewhere near the
|
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|
+
actual root. Used if `fprime` is not provided.
|
163
|
+
rtol : float, optional
|
164
|
+
Tolerance (relative) for termination.
|
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|
+
full_output : bool, optional
|
166
|
+
If `full_output` is False (default), the root is returned.
|
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|
+
If True and `x0` is scalar, the return value is ``(x, r)``, where ``x``
|
168
|
+
is the root and ``r`` is a `RootResults` object.
|
169
|
+
If True and `x0` is non-scalar, the return value is ``(x, converged,
|
170
|
+
zero_der)`` (see Returns section for details).
|
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|
+
disp : bool, optional
|
172
|
+
If True, raise a RuntimeError if the algorithm didn't converge, with
|
173
|
+
the error message containing the number of iterations and current
|
174
|
+
function value. Otherwise, the convergence status is recorded in a
|
175
|
+
`RootResults` return object.
|
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|
+
Ignored if `x0` is not scalar.
|
177
|
+
*Note: this has little to do with displaying, however,
|
178
|
+
the `disp` keyword cannot be renamed for backwards compatibility.*
|
179
|
+
|
180
|
+
Returns
|
181
|
+
-------
|
182
|
+
root : float, sequence, or ndarray
|
183
|
+
Estimated location where function is zero.
|
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|
+
r : `RootResults`, optional
|
185
|
+
Present if ``full_output=True`` and `x0` is scalar.
|
186
|
+
Object containing information about the convergence. In particular,
|
187
|
+
``r.converged`` is True if the routine converged.
|
188
|
+
converged : ndarray of bool, optional
|
189
|
+
Present if ``full_output=True`` and `x0` is non-scalar.
|
190
|
+
For vector functions, indicates which elements converged successfully.
|
191
|
+
zero_der : ndarray of bool, optional
|
192
|
+
Present if ``full_output=True`` and `x0` is non-scalar.
|
193
|
+
For vector functions, indicates which elements had a zero derivative.
|
194
|
+
|
195
|
+
See Also
|
196
|
+
--------
|
197
|
+
root_scalar : interface to root solvers for scalar functions
|
198
|
+
root : interface to root solvers for multi-input, multi-output functions
|
199
|
+
|
200
|
+
Notes
|
201
|
+
-----
|
202
|
+
The convergence rate of the Newton-Raphson method is quadratic,
|
203
|
+
the Halley method is cubic, and the secant method is
|
204
|
+
sub-quadratic. This means that if the function is well-behaved
|
205
|
+
the actual error in the estimated root after the nth iteration
|
206
|
+
is approximately the square (cube for Halley) of the error
|
207
|
+
after the (n-1)th step. However, the stopping criterion used
|
208
|
+
here is the step size and there is no guarantee that a root
|
209
|
+
has been found. Consequently, the result should be verified.
|
210
|
+
Safer algorithms are brentq, brenth, ridder, and bisect,
|
211
|
+
but they all require that the root first be bracketed in an
|
212
|
+
interval where the function changes sign. The brentq algorithm
|
213
|
+
is recommended for general use in one dimensional problems
|
214
|
+
when such an interval has been found.
|
215
|
+
|
216
|
+
When `newton` is used with arrays, it is best suited for the following
|
217
|
+
types of problems:
|
218
|
+
|
219
|
+
* The initial guesses, `x0`, are all relatively the same distance from
|
220
|
+
the roots.
|
221
|
+
* Some or all of the extra arguments, `args`, are also arrays so that a
|
222
|
+
class of similar problems can be solved together.
|
223
|
+
* The size of the initial guesses, `x0`, is larger than O(100) elements.
|
224
|
+
Otherwise, a naive loop may perform as well or better than a vector.
|
225
|
+
|
226
|
+
Examples
|
227
|
+
--------
|
228
|
+
>>> import numpy as np
|
229
|
+
>>> import matplotlib.pyplot as plt
|
230
|
+
>>> from scipy import optimize
|
231
|
+
|
232
|
+
>>> def f(x):
|
233
|
+
... return (x**3 - 1) # only one real root at x = 1
|
234
|
+
|
235
|
+
``fprime`` is not provided, use the secant method:
|
236
|
+
|
237
|
+
>>> root = optimize.newton(f, 1.5)
|
238
|
+
>>> root
|
239
|
+
1.0000000000000016
|
240
|
+
>>> root = optimize.newton(f, 1.5, fprime2=lambda x: 6 * x)
|
241
|
+
>>> root
|
242
|
+
1.0000000000000016
|
243
|
+
|
244
|
+
Only ``fprime`` is provided, use the Newton-Raphson method:
|
245
|
+
|
246
|
+
>>> root = optimize.newton(f, 1.5, fprime=lambda x: 3 * x**2)
|
247
|
+
>>> root
|
248
|
+
1.0
|
249
|
+
|
250
|
+
Both ``fprime2`` and ``fprime`` are provided, use Halley's method:
|
251
|
+
|
252
|
+
>>> root = optimize.newton(f, 1.5, fprime=lambda x: 3 * x**2,
|
253
|
+
... fprime2=lambda x: 6 * x)
|
254
|
+
>>> root
|
255
|
+
1.0
|
256
|
+
|
257
|
+
When we want to find roots for a set of related starting values and/or
|
258
|
+
function parameters, we can provide both of those as an array of inputs:
|
259
|
+
|
260
|
+
>>> f = lambda x, a: x**3 - a
|
261
|
+
>>> fder = lambda x, a: 3 * x**2
|
262
|
+
>>> rng = np.random.default_rng()
|
263
|
+
>>> x = rng.standard_normal(100)
|
264
|
+
>>> a = np.arange(-50, 50)
|
265
|
+
>>> vec_res = optimize.newton(f, x, fprime=fder, args=(a, ), maxiter=200)
|
266
|
+
|
267
|
+
The above is the equivalent of solving for each value in ``(x, a)``
|
268
|
+
separately in a for-loop, just faster:
|
269
|
+
|
270
|
+
>>> loop_res = [optimize.newton(f, x0, fprime=fder, args=(a0,),
|
271
|
+
... maxiter=200)
|
272
|
+
... for x0, a0 in zip(x, a)]
|
273
|
+
>>> np.allclose(vec_res, loop_res)
|
274
|
+
True
|
275
|
+
|
276
|
+
Plot the results found for all values of ``a``:
|
277
|
+
|
278
|
+
>>> analytical_result = np.sign(a) * np.abs(a)**(1/3)
|
279
|
+
>>> fig, ax = plt.subplots()
|
280
|
+
>>> ax.plot(a, analytical_result, 'o')
|
281
|
+
>>> ax.plot(a, vec_res, '.')
|
282
|
+
>>> ax.set_xlabel('$a$')
|
283
|
+
>>> ax.set_ylabel('$x$ where $f(x, a)=0$')
|
284
|
+
>>> plt.show()
|
285
|
+
|
286
|
+
"""
|
287
|
+
if tol <= 0:
|
288
|
+
raise ValueError(f"tol too small ({tol:g} <= 0)")
|
289
|
+
maxiter = operator.index(maxiter)
|
290
|
+
if maxiter < 1:
|
291
|
+
raise ValueError("maxiter must be greater than 0")
|
292
|
+
if np.size(x0) > 1:
|
293
|
+
return _array_newton(func, x0, fprime, args, tol, maxiter, fprime2,
|
294
|
+
full_output)
|
295
|
+
|
296
|
+
# Convert to float (don't use float(x0); this works also for complex x0)
|
297
|
+
# Use np.asarray because we want x0 to be a numpy object, not a Python
|
298
|
+
# object. e.g. np.complex(1+1j) > 0 is possible, but (1 + 1j) > 0 raises
|
299
|
+
# a TypeError
|
300
|
+
x0 = np.asarray(x0)[()] * 1.0
|
301
|
+
p0 = x0
|
302
|
+
funcalls = 0
|
303
|
+
if fprime is not None:
|
304
|
+
# Newton-Raphson method
|
305
|
+
method = "newton"
|
306
|
+
for itr in range(maxiter):
|
307
|
+
# first evaluate fval
|
308
|
+
fval = func(p0, *args)
|
309
|
+
funcalls += 1
|
310
|
+
# If fval is 0, a root has been found, then terminate
|
311
|
+
if fval == 0:
|
312
|
+
return _results_select(
|
313
|
+
full_output, (p0, funcalls, itr, _ECONVERGED), method)
|
314
|
+
fder = fprime(p0, *args)
|
315
|
+
funcalls += 1
|
316
|
+
if fder == 0:
|
317
|
+
msg = "Derivative was zero."
|
318
|
+
if disp:
|
319
|
+
msg += (
|
320
|
+
f" Failed to converge after {itr + 1} iterations,"
|
321
|
+
f" value is {p0}."
|
322
|
+
)
|
323
|
+
raise RuntimeError(msg)
|
324
|
+
warnings.warn(msg, RuntimeWarning, stacklevel=2)
|
325
|
+
return _results_select(
|
326
|
+
full_output, (p0, funcalls, itr + 1, _ECONVERR), method)
|
327
|
+
newton_step = fval / fder
|
328
|
+
if fprime2:
|
329
|
+
fder2 = fprime2(p0, *args)
|
330
|
+
funcalls += 1
|
331
|
+
method = "halley"
|
332
|
+
# Halley's method:
|
333
|
+
# newton_step /= (1.0 - 0.5 * newton_step * fder2 / fder)
|
334
|
+
# Only do it if denominator stays close enough to 1
|
335
|
+
# Rationale: If 1-adj < 0, then Halley sends x in the
|
336
|
+
# opposite direction to Newton. Doesn't happen if x is close
|
337
|
+
# enough to root.
|
338
|
+
adj = newton_step * fder2 / fder / 2
|
339
|
+
if np.abs(adj) < 1:
|
340
|
+
newton_step /= 1.0 - adj
|
341
|
+
p = p0 - newton_step
|
342
|
+
if np.isclose(p, p0, rtol=rtol, atol=tol):
|
343
|
+
return _results_select(
|
344
|
+
full_output, (p, funcalls, itr + 1, _ECONVERGED), method)
|
345
|
+
p0 = p
|
346
|
+
else:
|
347
|
+
# Secant method
|
348
|
+
method = "secant"
|
349
|
+
if x1 is not None:
|
350
|
+
if x1 == x0:
|
351
|
+
raise ValueError("x1 and x0 must be different")
|
352
|
+
p1 = x1
|
353
|
+
else:
|
354
|
+
eps = 1e-4
|
355
|
+
p1 = x0 * (1 + eps)
|
356
|
+
p1 += (eps if p1 >= 0 else -eps)
|
357
|
+
q0 = func(p0, *args)
|
358
|
+
funcalls += 1
|
359
|
+
q1 = func(p1, *args)
|
360
|
+
funcalls += 1
|
361
|
+
if abs(q1) < abs(q0):
|
362
|
+
p0, p1, q0, q1 = p1, p0, q1, q0
|
363
|
+
for itr in range(maxiter):
|
364
|
+
if q1 == q0:
|
365
|
+
if p1 != p0:
|
366
|
+
msg = f"Tolerance of {p1 - p0} reached."
|
367
|
+
if disp:
|
368
|
+
msg += (
|
369
|
+
f" Failed to converge after {itr + 1} iterations,"
|
370
|
+
f" value is {p1}."
|
371
|
+
)
|
372
|
+
raise RuntimeError(msg)
|
373
|
+
warnings.warn(msg, RuntimeWarning, stacklevel=2)
|
374
|
+
p = (p1 + p0) / 2.0
|
375
|
+
return _results_select(
|
376
|
+
full_output, (p, funcalls, itr + 1, _ECONVERR), method)
|
377
|
+
else:
|
378
|
+
if abs(q1) > abs(q0):
|
379
|
+
p = (-q0 / q1 * p1 + p0) / (1 - q0 / q1)
|
380
|
+
else:
|
381
|
+
p = (-q1 / q0 * p0 + p1) / (1 - q1 / q0)
|
382
|
+
if np.isclose(p, p1, rtol=rtol, atol=tol):
|
383
|
+
return _results_select(
|
384
|
+
full_output, (p, funcalls, itr + 1, _ECONVERGED), method)
|
385
|
+
p0, q0 = p1, q1
|
386
|
+
p1 = p
|
387
|
+
q1 = func(p1, *args)
|
388
|
+
funcalls += 1
|
389
|
+
|
390
|
+
if disp:
|
391
|
+
msg = f"Failed to converge after {itr + 1} iterations, value is {p}."
|
392
|
+
raise RuntimeError(msg)
|
393
|
+
|
394
|
+
return _results_select(full_output, (p, funcalls, itr + 1, _ECONVERR), method)
|
395
|
+
|
396
|
+
|
397
|
+
def _array_newton(func, x0, fprime, args, tol, maxiter, fprime2, full_output):
|
398
|
+
"""
|
399
|
+
A vectorized version of Newton, Halley, and secant methods for arrays.
|
400
|
+
|
401
|
+
Do not use this method directly. This method is called from `newton`
|
402
|
+
when ``np.size(x0) > 1`` is ``True``. For docstring, see `newton`.
|
403
|
+
"""
|
404
|
+
# Explicitly copy `x0` as `p` will be modified inplace, but the
|
405
|
+
# user's array should not be altered.
|
406
|
+
p = np.array(x0, copy=True)
|
407
|
+
|
408
|
+
failures = np.ones_like(p, dtype=bool)
|
409
|
+
nz_der = np.ones_like(failures)
|
410
|
+
if fprime is not None:
|
411
|
+
# Newton-Raphson method
|
412
|
+
for iteration in range(maxiter):
|
413
|
+
# first evaluate fval
|
414
|
+
fval = np.asarray(func(p, *args))
|
415
|
+
# If all fval are 0, all roots have been found, then terminate
|
416
|
+
if not fval.any():
|
417
|
+
failures = fval.astype(bool)
|
418
|
+
break
|
419
|
+
fder = np.asarray(fprime(p, *args))
|
420
|
+
nz_der = (fder != 0)
|
421
|
+
# stop iterating if all derivatives are zero
|
422
|
+
if not nz_der.any():
|
423
|
+
break
|
424
|
+
# Newton step
|
425
|
+
dp = fval[nz_der] / fder[nz_der]
|
426
|
+
if fprime2 is not None:
|
427
|
+
fder2 = np.asarray(fprime2(p, *args))
|
428
|
+
dp = dp / (1.0 - 0.5 * dp * fder2[nz_der] / fder[nz_der])
|
429
|
+
# only update nonzero derivatives
|
430
|
+
p = np.asarray(p, dtype=np.result_type(p, dp, np.float64))
|
431
|
+
p[nz_der] -= dp
|
432
|
+
failures[nz_der] = np.abs(dp) >= tol # items not yet converged
|
433
|
+
# stop iterating if there aren't any failures, not incl zero der
|
434
|
+
if not failures[nz_der].any():
|
435
|
+
break
|
436
|
+
else:
|
437
|
+
# Secant method
|
438
|
+
dx = np.finfo(float).eps**0.33
|
439
|
+
p1 = p * (1 + dx) + np.where(p >= 0, dx, -dx)
|
440
|
+
q0 = np.asarray(func(p, *args))
|
441
|
+
q1 = np.asarray(func(p1, *args))
|
442
|
+
active = np.ones_like(p, dtype=bool)
|
443
|
+
for iteration in range(maxiter):
|
444
|
+
nz_der = (q1 != q0)
|
445
|
+
# stop iterating if all derivatives are zero
|
446
|
+
if not nz_der.any():
|
447
|
+
p = (p1 + p) / 2.0
|
448
|
+
break
|
449
|
+
# Secant Step
|
450
|
+
dp = (q1 * (p1 - p))[nz_der] / (q1 - q0)[nz_der]
|
451
|
+
# only update nonzero derivatives
|
452
|
+
p = np.asarray(p, dtype=np.result_type(p, p1, dp, np.float64))
|
453
|
+
p[nz_der] = p1[nz_der] - dp
|
454
|
+
active_zero_der = ~nz_der & active
|
455
|
+
p[active_zero_der] = (p1 + p)[active_zero_der] / 2.0
|
456
|
+
active &= nz_der # don't assign zero derivatives again
|
457
|
+
failures[nz_der] = np.abs(dp) >= tol # not yet converged
|
458
|
+
# stop iterating if there aren't any failures, not incl zero der
|
459
|
+
if not failures[nz_der].any():
|
460
|
+
break
|
461
|
+
p1, p = p, p1
|
462
|
+
q0 = q1
|
463
|
+
q1 = np.asarray(func(p1, *args))
|
464
|
+
|
465
|
+
zero_der = ~nz_der & failures # don't include converged with zero-ders
|
466
|
+
if zero_der.any():
|
467
|
+
# Secant warnings
|
468
|
+
if fprime is None:
|
469
|
+
nonzero_dp = (p1 != p)
|
470
|
+
# non-zero dp, but infinite newton step
|
471
|
+
zero_der_nz_dp = (zero_der & nonzero_dp)
|
472
|
+
if zero_der_nz_dp.any():
|
473
|
+
rms = np.sqrt(
|
474
|
+
sum((p1[zero_der_nz_dp] - p[zero_der_nz_dp]) ** 2)
|
475
|
+
)
|
476
|
+
warnings.warn(f'RMS of {rms:g} reached', RuntimeWarning, stacklevel=3)
|
477
|
+
# Newton or Halley warnings
|
478
|
+
else:
|
479
|
+
all_or_some = 'all' if zero_der.all() else 'some'
|
480
|
+
msg = f'{all_or_some:s} derivatives were zero'
|
481
|
+
warnings.warn(msg, RuntimeWarning, stacklevel=3)
|
482
|
+
elif failures.any():
|
483
|
+
all_or_some = 'all' if failures.all() else 'some'
|
484
|
+
msg = f'{all_or_some:s} failed to converge after {maxiter:d} iterations'
|
485
|
+
if failures.all():
|
486
|
+
raise RuntimeError(msg)
|
487
|
+
warnings.warn(msg, RuntimeWarning, stacklevel=3)
|
488
|
+
|
489
|
+
if full_output:
|
490
|
+
result = namedtuple('result', ('root', 'converged', 'zero_der'))
|
491
|
+
p = result(p, ~failures, zero_der)
|
492
|
+
|
493
|
+
return p
|
494
|
+
|
495
|
+
|
496
|
+
def bisect(f, a, b, args=(),
|
497
|
+
xtol=_xtol, rtol=_rtol, maxiter=_iter,
|
498
|
+
full_output=False, disp=True):
|
499
|
+
"""
|
500
|
+
Find root of a function within an interval using bisection.
|
501
|
+
|
502
|
+
Basic bisection routine to find a root of the function `f` between the
|
503
|
+
arguments `a` and `b`. `f(a)` and `f(b)` cannot have the same signs.
|
504
|
+
Slow but sure.
|
505
|
+
|
506
|
+
Parameters
|
507
|
+
----------
|
508
|
+
f : function
|
509
|
+
Python function returning a number. `f` must be continuous, and
|
510
|
+
f(a) and f(b) must have opposite signs.
|
511
|
+
a : scalar
|
512
|
+
One end of the bracketing interval [a,b].
|
513
|
+
b : scalar
|
514
|
+
The other end of the bracketing interval [a,b].
|
515
|
+
xtol : number, optional
|
516
|
+
The computed root ``x0`` will satisfy ``np.isclose(x, x0,
|
517
|
+
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
518
|
+
parameter must be positive.
|
519
|
+
rtol : number, optional
|
520
|
+
The computed root ``x0`` will satisfy ``np.isclose(x, x0,
|
521
|
+
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
522
|
+
parameter cannot be smaller than its default value of
|
523
|
+
``4*np.finfo(float).eps``.
|
524
|
+
maxiter : int, optional
|
525
|
+
If convergence is not achieved in `maxiter` iterations, an error is
|
526
|
+
raised. Must be >= 0.
|
527
|
+
args : tuple, optional
|
528
|
+
Containing extra arguments for the function `f`.
|
529
|
+
`f` is called by ``apply(f, (x)+args)``.
|
530
|
+
full_output : bool, optional
|
531
|
+
If `full_output` is False, the root is returned. If `full_output` is
|
532
|
+
True, the return value is ``(x, r)``, where x is the root, and r is
|
533
|
+
a `RootResults` object.
|
534
|
+
disp : bool, optional
|
535
|
+
If True, raise RuntimeError if the algorithm didn't converge.
|
536
|
+
Otherwise, the convergence status is recorded in a `RootResults`
|
537
|
+
return object.
|
538
|
+
|
539
|
+
Returns
|
540
|
+
-------
|
541
|
+
root : float
|
542
|
+
Root of `f` between `a` and `b`.
|
543
|
+
r : `RootResults` (present if ``full_output = True``)
|
544
|
+
Object containing information about the convergence. In particular,
|
545
|
+
``r.converged`` is True if the routine converged.
|
546
|
+
|
547
|
+
Notes
|
548
|
+
-----
|
549
|
+
As mentioned in the parameter documentation, the computed root ``x0`` will
|
550
|
+
satisfy ``np.isclose(x, x0, atol=xtol, rtol=rtol)``, where ``x`` is the
|
551
|
+
exact root. In equation form, this terminating condition is ``abs(x - x0)
|
552
|
+
<= xtol + rtol * abs(x0)``.
|
553
|
+
|
554
|
+
The default value ``xtol=2e-12`` may lead to surprising behavior if one
|
555
|
+
expects `bisect` to always compute roots with relative error near machine
|
556
|
+
precision. Care should be taken to select `xtol` for the use case at hand.
|
557
|
+
Setting ``xtol=5e-324``, the smallest subnormal number, will ensure the
|
558
|
+
highest level of accuracy. Larger values of `xtol` may be useful for saving
|
559
|
+
function evaluations when a root is at or near zero in applications where
|
560
|
+
the tiny absolute differences available between floating point numbers near
|
561
|
+
zero are not meaningful.
|
562
|
+
|
563
|
+
Examples
|
564
|
+
--------
|
565
|
+
|
566
|
+
>>> def f(x):
|
567
|
+
... return (x**2 - 1)
|
568
|
+
|
569
|
+
>>> from scipy import optimize
|
570
|
+
|
571
|
+
>>> root = optimize.bisect(f, 0, 2)
|
572
|
+
>>> root
|
573
|
+
1.0
|
574
|
+
|
575
|
+
>>> root = optimize.bisect(f, -2, 0)
|
576
|
+
>>> root
|
577
|
+
-1.0
|
578
|
+
|
579
|
+
See Also
|
580
|
+
--------
|
581
|
+
brentq, brenth, bisect, newton
|
582
|
+
fixed_point : scalar fixed-point finder
|
583
|
+
fsolve : n-dimensional root-finding
|
584
|
+
elementwise.find_root : efficient elementwise 1-D root-finder
|
585
|
+
|
586
|
+
"""
|
587
|
+
if not isinstance(args, tuple):
|
588
|
+
args = (args,)
|
589
|
+
maxiter = operator.index(maxiter)
|
590
|
+
if xtol <= 0:
|
591
|
+
raise ValueError(f"xtol too small ({xtol:g} <= 0)")
|
592
|
+
if rtol < _rtol:
|
593
|
+
raise ValueError(f"rtol too small ({rtol:g} < {_rtol:g})")
|
594
|
+
f = _wrap_nan_raise(f)
|
595
|
+
r = _zeros._bisect(f, a, b, xtol, rtol, maxiter, args, full_output, disp)
|
596
|
+
return results_c(full_output, r, "bisect")
|
597
|
+
|
598
|
+
|
599
|
+
def ridder(f, a, b, args=(),
|
600
|
+
xtol=_xtol, rtol=_rtol, maxiter=_iter,
|
601
|
+
full_output=False, disp=True):
|
602
|
+
"""
|
603
|
+
Find a root of a function in an interval using Ridder's method.
|
604
|
+
|
605
|
+
Parameters
|
606
|
+
----------
|
607
|
+
f : function
|
608
|
+
Python function returning a number. f must be continuous, and f(a) and
|
609
|
+
f(b) must have opposite signs.
|
610
|
+
a : scalar
|
611
|
+
One end of the bracketing interval [a,b].
|
612
|
+
b : scalar
|
613
|
+
The other end of the bracketing interval [a,b].
|
614
|
+
xtol : number, optional
|
615
|
+
The computed root ``x0`` will satisfy ``np.isclose(x, x0,
|
616
|
+
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
617
|
+
parameter must be positive.
|
618
|
+
rtol : number, optional
|
619
|
+
The computed root ``x0`` will satisfy ``np.isclose(x, x0,
|
620
|
+
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
621
|
+
parameter cannot be smaller than its default value of
|
622
|
+
``4*np.finfo(float).eps``.
|
623
|
+
maxiter : int, optional
|
624
|
+
If convergence is not achieved in `maxiter` iterations, an error is
|
625
|
+
raised. Must be >= 0.
|
626
|
+
args : tuple, optional
|
627
|
+
Containing extra arguments for the function `f`.
|
628
|
+
`f` is called by ``apply(f, (x)+args)``.
|
629
|
+
full_output : bool, optional
|
630
|
+
If `full_output` is False, the root is returned. If `full_output` is
|
631
|
+
True, the return value is ``(x, r)``, where `x` is the root, and `r` is
|
632
|
+
a `RootResults` object.
|
633
|
+
disp : bool, optional
|
634
|
+
If True, raise RuntimeError if the algorithm didn't converge.
|
635
|
+
Otherwise, the convergence status is recorded in any `RootResults`
|
636
|
+
return object.
|
637
|
+
|
638
|
+
Returns
|
639
|
+
-------
|
640
|
+
root : float
|
641
|
+
Root of `f` between `a` and `b`.
|
642
|
+
r : `RootResults` (present if ``full_output = True``)
|
643
|
+
Object containing information about the convergence.
|
644
|
+
In particular, ``r.converged`` is True if the routine converged.
|
645
|
+
|
646
|
+
See Also
|
647
|
+
--------
|
648
|
+
brentq, brenth, bisect, newton : 1-D root-finding
|
649
|
+
fixed_point : scalar fixed-point finder
|
650
|
+
elementwise.find_root : efficient elementwise 1-D root-finder
|
651
|
+
|
652
|
+
Notes
|
653
|
+
-----
|
654
|
+
Uses [Ridders1979]_ method to find a root of the function `f` between the
|
655
|
+
arguments `a` and `b`. Ridders' method is faster than bisection, but not
|
656
|
+
generally as fast as the Brent routines. [Ridders1979]_ provides the
|
657
|
+
classic description and source of the algorithm. A description can also be
|
658
|
+
found in any recent edition of Numerical Recipes.
|
659
|
+
|
660
|
+
The routine used here diverges slightly from standard presentations in
|
661
|
+
order to be a bit more careful of tolerance.
|
662
|
+
|
663
|
+
As mentioned in the parameter documentation, the computed root ``x0`` will
|
664
|
+
satisfy ``np.isclose(x, x0, atol=xtol, rtol=rtol)``, where ``x`` is the
|
665
|
+
exact root. In equation form, this terminating condition is ``abs(x - x0)
|
666
|
+
<= xtol + rtol * abs(x0)``.
|
667
|
+
|
668
|
+
The default value ``xtol=2e-12`` may lead to surprising behavior if one
|
669
|
+
expects `ridder` to always compute roots with relative error near machine
|
670
|
+
precision. Care should be taken to select `xtol` for the use case at hand.
|
671
|
+
Setting ``xtol=5e-324``, the smallest subnormal number, will ensure the
|
672
|
+
highest level of accuracy. Larger values of `xtol` may be useful for saving
|
673
|
+
function evaluations when a root is at or near zero in applications where
|
674
|
+
the tiny absolute differences available between floating point numbers near
|
675
|
+
zero are not meaningful.
|
676
|
+
|
677
|
+
References
|
678
|
+
----------
|
679
|
+
.. [Ridders1979]
|
680
|
+
Ridders, C. F. J. "A New Algorithm for Computing a
|
681
|
+
Single Root of a Real Continuous Function."
|
682
|
+
IEEE Trans. Circuits Systems 26, 979-980, 1979.
|
683
|
+
|
684
|
+
Examples
|
685
|
+
--------
|
686
|
+
|
687
|
+
>>> def f(x):
|
688
|
+
... return (x**2 - 1)
|
689
|
+
|
690
|
+
>>> from scipy import optimize
|
691
|
+
|
692
|
+
>>> root = optimize.ridder(f, 0, 2)
|
693
|
+
>>> root
|
694
|
+
1.0
|
695
|
+
|
696
|
+
>>> root = optimize.ridder(f, -2, 0)
|
697
|
+
>>> root
|
698
|
+
-1.0
|
699
|
+
"""
|
700
|
+
if not isinstance(args, tuple):
|
701
|
+
args = (args,)
|
702
|
+
maxiter = operator.index(maxiter)
|
703
|
+
if xtol <= 0:
|
704
|
+
raise ValueError(f"xtol too small ({xtol:g} <= 0)")
|
705
|
+
if rtol < _rtol:
|
706
|
+
raise ValueError(f"rtol too small ({rtol:g} < {_rtol:g})")
|
707
|
+
f = _wrap_nan_raise(f)
|
708
|
+
r = _zeros._ridder(f, a, b, xtol, rtol, maxiter, args, full_output, disp)
|
709
|
+
return results_c(full_output, r, "ridder")
|
710
|
+
|
711
|
+
|
712
|
+
def brentq(f, a, b, args=(),
|
713
|
+
xtol=_xtol, rtol=_rtol, maxiter=_iter,
|
714
|
+
full_output=False, disp=True):
|
715
|
+
"""
|
716
|
+
Find a root of a function in a bracketing interval using Brent's method.
|
717
|
+
|
718
|
+
Uses the classic Brent's method to find a root of the function `f` on
|
719
|
+
the sign changing interval [a , b]. Generally considered the best of the
|
720
|
+
rootfinding routines here. It is a safe version of the secant method that
|
721
|
+
uses inverse quadratic extrapolation. Brent's method combines root
|
722
|
+
bracketing, interval bisection, and inverse quadratic interpolation. It is
|
723
|
+
sometimes known as the van Wijngaarden-Dekker-Brent method. Brent (1973)
|
724
|
+
claims convergence is guaranteed for functions computable within [a,b].
|
725
|
+
|
726
|
+
[Brent1973]_ provides the classic description of the algorithm. Another
|
727
|
+
description can be found in a recent edition of Numerical Recipes, including
|
728
|
+
[PressEtal1992]_. A third description is at
|
729
|
+
http://mathworld.wolfram.com/BrentsMethod.html. It should be easy to
|
730
|
+
understand the algorithm just by reading our code. Our code diverges a bit
|
731
|
+
from standard presentations: we choose a different formula for the
|
732
|
+
extrapolation step.
|
733
|
+
|
734
|
+
Parameters
|
735
|
+
----------
|
736
|
+
f : function
|
737
|
+
Python function returning a number. The function :math:`f`
|
738
|
+
must be continuous, and :math:`f(a)` and :math:`f(b)` must
|
739
|
+
have opposite signs.
|
740
|
+
a : scalar
|
741
|
+
One end of the bracketing interval :math:`[a, b]`.
|
742
|
+
b : scalar
|
743
|
+
The other end of the bracketing interval :math:`[a, b]`.
|
744
|
+
xtol : number, optional
|
745
|
+
The computed root ``x0`` will satisfy ``np.isclose(x, x0,
|
746
|
+
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
747
|
+
parameter must be positive. For nice functions, Brent's
|
748
|
+
method will often satisfy the above condition with ``xtol/2``
|
749
|
+
and ``rtol/2``. [Brent1973]_
|
750
|
+
rtol : number, optional
|
751
|
+
The computed root ``x0`` will satisfy ``np.isclose(x, x0,
|
752
|
+
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
753
|
+
parameter cannot be smaller than its default value of
|
754
|
+
``4*np.finfo(float).eps``. For nice functions, Brent's
|
755
|
+
method will often satisfy the above condition with ``xtol/2``
|
756
|
+
and ``rtol/2``. [Brent1973]_
|
757
|
+
maxiter : int, optional
|
758
|
+
If convergence is not achieved in `maxiter` iterations, an error is
|
759
|
+
raised. Must be >= 0.
|
760
|
+
args : tuple, optional
|
761
|
+
Containing extra arguments for the function `f`.
|
762
|
+
`f` is called by ``apply(f, (x)+args)``.
|
763
|
+
full_output : bool, optional
|
764
|
+
If `full_output` is False, the root is returned. If `full_output` is
|
765
|
+
True, the return value is ``(x, r)``, where `x` is the root, and `r` is
|
766
|
+
a `RootResults` object.
|
767
|
+
disp : bool, optional
|
768
|
+
If True, raise RuntimeError if the algorithm didn't converge.
|
769
|
+
Otherwise, the convergence status is recorded in any `RootResults`
|
770
|
+
return object.
|
771
|
+
|
772
|
+
Returns
|
773
|
+
-------
|
774
|
+
root : float
|
775
|
+
Root of `f` between `a` and `b`.
|
776
|
+
r : `RootResults` (present if ``full_output = True``)
|
777
|
+
Object containing information about the convergence. In particular,
|
778
|
+
``r.converged`` is True if the routine converged.
|
779
|
+
|
780
|
+
See Also
|
781
|
+
--------
|
782
|
+
fmin, fmin_powell, fmin_cg, fmin_bfgs, fmin_ncg : multivariate local optimizers
|
783
|
+
leastsq : nonlinear least squares minimizer
|
784
|
+
fmin_l_bfgs_b, fmin_tnc, fmin_cobyla : constrained multivariate optimizers
|
785
|
+
basinhopping, differential_evolution, brute : global optimizers
|
786
|
+
fminbound, brent, golden, bracket : local scalar minimizers
|
787
|
+
fsolve : N-D root-finding
|
788
|
+
brenth, ridder, bisect, newton : 1-D root-finding
|
789
|
+
fixed_point : scalar fixed-point finder
|
790
|
+
elementwise.find_root : efficient elementwise 1-D root-finder
|
791
|
+
|
792
|
+
Notes
|
793
|
+
-----
|
794
|
+
`f` must be continuous. f(a) and f(b) must have opposite signs.
|
795
|
+
|
796
|
+
As mentioned in the parameter documentation, the computed root ``x0`` will
|
797
|
+
satisfy ``np.isclose(x, x0, atol=xtol, rtol=rtol)``, where ``x`` is the
|
798
|
+
exact root. In equation form, this terminating condition is ``abs(x - x0)
|
799
|
+
<= xtol + rtol * abs(x0)``.
|
800
|
+
|
801
|
+
The default value ``xtol=2e-12`` may lead to surprising behavior if one
|
802
|
+
expects `brentq` to always compute roots with relative error near machine
|
803
|
+
precision. Care should be taken to select `xtol` for the use case at hand.
|
804
|
+
Setting ``xtol=5e-324``, the smallest subnormal number, will ensure the
|
805
|
+
highest level of accuracy. Larger values of `xtol` may be useful for saving
|
806
|
+
function evaluations when a root is at or near zero in applications where
|
807
|
+
the tiny absolute differences available between floating point numbers near
|
808
|
+
zero are not meaningful.
|
809
|
+
|
810
|
+
References
|
811
|
+
----------
|
812
|
+
.. [Brent1973]
|
813
|
+
Brent, R. P.,
|
814
|
+
*Algorithms for Minimization Without Derivatives*.
|
815
|
+
Englewood Cliffs, NJ: Prentice-Hall, 1973. Ch. 3-4.
|
816
|
+
|
817
|
+
.. [PressEtal1992]
|
818
|
+
Press, W. H.; Flannery, B. P.; Teukolsky, S. A.; and Vetterling, W. T.
|
819
|
+
*Numerical Recipes in FORTRAN: The Art of Scientific Computing*, 2nd ed.
|
820
|
+
Cambridge, England: Cambridge University Press, pp. 352-355, 1992.
|
821
|
+
Section 9.3: "Van Wijngaarden-Dekker-Brent Method."
|
822
|
+
|
823
|
+
Examples
|
824
|
+
--------
|
825
|
+
>>> def f(x):
|
826
|
+
... return (x**2 - 1)
|
827
|
+
|
828
|
+
>>> from scipy import optimize
|
829
|
+
|
830
|
+
>>> root = optimize.brentq(f, -2, 0)
|
831
|
+
>>> root
|
832
|
+
-1.0
|
833
|
+
|
834
|
+
>>> root = optimize.brentq(f, 0, 2)
|
835
|
+
>>> root
|
836
|
+
1.0
|
837
|
+
"""
|
838
|
+
if not isinstance(args, tuple):
|
839
|
+
args = (args,)
|
840
|
+
maxiter = operator.index(maxiter)
|
841
|
+
if xtol <= 0:
|
842
|
+
raise ValueError(f"xtol too small ({xtol:g} <= 0)")
|
843
|
+
if rtol < _rtol:
|
844
|
+
raise ValueError(f"rtol too small ({rtol:g} < {_rtol:g})")
|
845
|
+
f = _wrap_nan_raise(f)
|
846
|
+
r = _zeros._brentq(f, a, b, xtol, rtol, maxiter, args, full_output, disp)
|
847
|
+
return results_c(full_output, r, "brentq")
|
848
|
+
|
849
|
+
|
850
|
+
def brenth(f, a, b, args=(),
|
851
|
+
xtol=_xtol, rtol=_rtol, maxiter=_iter,
|
852
|
+
full_output=False, disp=True):
|
853
|
+
"""Find a root of a function in a bracketing interval using Brent's
|
854
|
+
method with hyperbolic extrapolation.
|
855
|
+
|
856
|
+
A variation on the classic Brent routine to find a root of the function f
|
857
|
+
between the arguments a and b that uses hyperbolic extrapolation instead of
|
858
|
+
inverse quadratic extrapolation. Bus & Dekker (1975) guarantee convergence
|
859
|
+
for this method, claiming that the upper bound of function evaluations here
|
860
|
+
is 4 or 5 times that of bisection.
|
861
|
+
f(a) and f(b) cannot have the same signs. Generally, on a par with the
|
862
|
+
brent routine, but not as heavily tested. It is a safe version of the
|
863
|
+
secant method that uses hyperbolic extrapolation.
|
864
|
+
The version here is by Chuck Harris, and implements Algorithm M of
|
865
|
+
[BusAndDekker1975]_, where further details (convergence properties,
|
866
|
+
additional remarks and such) can be found
|
867
|
+
|
868
|
+
Parameters
|
869
|
+
----------
|
870
|
+
f : function
|
871
|
+
Python function returning a number. f must be continuous, and f(a) and
|
872
|
+
f(b) must have opposite signs.
|
873
|
+
a : scalar
|
874
|
+
One end of the bracketing interval [a,b].
|
875
|
+
b : scalar
|
876
|
+
The other end of the bracketing interval [a,b].
|
877
|
+
xtol : number, optional
|
878
|
+
The computed root ``x0`` will satisfy ``np.isclose(x, x0,
|
879
|
+
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
880
|
+
parameter must be positive. As with `brentq`, for nice
|
881
|
+
functions the method will often satisfy the above condition
|
882
|
+
with ``xtol/2`` and ``rtol/2``.
|
883
|
+
rtol : number, optional
|
884
|
+
The computed root ``x0`` will satisfy ``np.isclose(x, x0,
|
885
|
+
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
886
|
+
parameter cannot be smaller than its default value of
|
887
|
+
``4*np.finfo(float).eps``. As with `brentq`, for nice functions
|
888
|
+
the method will often satisfy the above condition with
|
889
|
+
``xtol/2`` and ``rtol/2``.
|
890
|
+
maxiter : int, optional
|
891
|
+
If convergence is not achieved in `maxiter` iterations, an error is
|
892
|
+
raised. Must be >= 0.
|
893
|
+
args : tuple, optional
|
894
|
+
Containing extra arguments for the function `f`.
|
895
|
+
`f` is called by ``apply(f, (x)+args)``.
|
896
|
+
full_output : bool, optional
|
897
|
+
If `full_output` is False, the root is returned. If `full_output` is
|
898
|
+
True, the return value is ``(x, r)``, where `x` is the root, and `r` is
|
899
|
+
a `RootResults` object.
|
900
|
+
disp : bool, optional
|
901
|
+
If True, raise RuntimeError if the algorithm didn't converge.
|
902
|
+
Otherwise, the convergence status is recorded in any `RootResults`
|
903
|
+
return object.
|
904
|
+
|
905
|
+
Returns
|
906
|
+
-------
|
907
|
+
root : float
|
908
|
+
Root of `f` between `a` and `b`.
|
909
|
+
r : `RootResults` (present if ``full_output = True``)
|
910
|
+
Object containing information about the convergence. In particular,
|
911
|
+
``r.converged`` is True if the routine converged.
|
912
|
+
|
913
|
+
See Also
|
914
|
+
--------
|
915
|
+
fmin, fmin_powell, fmin_cg, fmin_bfgs, fmin_ncg : multivariate local optimizers
|
916
|
+
leastsq : nonlinear least squares minimizer
|
917
|
+
fmin_l_bfgs_b, fmin_tnc, fmin_cobyla : constrained multivariate optimizers
|
918
|
+
basinhopping, differential_evolution, brute : global optimizers
|
919
|
+
fminbound, brent, golden, bracket : local scalar minimizers
|
920
|
+
fsolve : N-D root-finding
|
921
|
+
brentq, ridder, bisect, newton : 1-D root-finding
|
922
|
+
fixed_point : scalar fixed-point finder
|
923
|
+
elementwise.find_root : efficient elementwise 1-D root-finder
|
924
|
+
|
925
|
+
Notes
|
926
|
+
-----
|
927
|
+
As mentioned in the parameter documentation, the computed root ``x0`` will
|
928
|
+
satisfy ``np.isclose(x, x0, atol=xtol, rtol=rtol)``, where ``x`` is the
|
929
|
+
exact root. In equation form, this terminating condition is ``abs(x - x0)
|
930
|
+
<= xtol + rtol * abs(x0)``.
|
931
|
+
|
932
|
+
The default value ``xtol=2e-12`` may lead to surprising behavior if one
|
933
|
+
expects `brenth` to always compute roots with relative error near machine
|
934
|
+
precision. Care should be taken to select `xtol` for the use case at hand.
|
935
|
+
Setting ``xtol=5e-324``, the smallest subnormal number, will ensure the
|
936
|
+
highest level of accuracy. Larger values of `xtol` may be useful for saving
|
937
|
+
function evaluations when a root is at or near zero in applications where
|
938
|
+
the tiny absolute differences available between floating point numbers near
|
939
|
+
zero are not meaningful.
|
940
|
+
|
941
|
+
References
|
942
|
+
----------
|
943
|
+
.. [BusAndDekker1975]
|
944
|
+
Bus, J. C. P., Dekker, T. J.,
|
945
|
+
"Two Efficient Algorithms with Guaranteed Convergence for Finding a Zero
|
946
|
+
of a Function", ACM Transactions on Mathematical Software, Vol. 1, Issue
|
947
|
+
4, Dec. 1975, pp. 330-345. Section 3: "Algorithm M".
|
948
|
+
:doi:`10.1145/355656.355659`
|
949
|
+
|
950
|
+
Examples
|
951
|
+
--------
|
952
|
+
>>> def f(x):
|
953
|
+
... return (x**2 - 1)
|
954
|
+
|
955
|
+
>>> from scipy import optimize
|
956
|
+
|
957
|
+
>>> root = optimize.brenth(f, -2, 0)
|
958
|
+
>>> root
|
959
|
+
-1.0
|
960
|
+
|
961
|
+
>>> root = optimize.brenth(f, 0, 2)
|
962
|
+
>>> root
|
963
|
+
1.0
|
964
|
+
|
965
|
+
"""
|
966
|
+
if not isinstance(args, tuple):
|
967
|
+
args = (args,)
|
968
|
+
maxiter = operator.index(maxiter)
|
969
|
+
if xtol <= 0:
|
970
|
+
raise ValueError(f"xtol too small ({xtol:g} <= 0)")
|
971
|
+
if rtol < _rtol:
|
972
|
+
raise ValueError(f"rtol too small ({rtol:g} < {_rtol:g})")
|
973
|
+
f = _wrap_nan_raise(f)
|
974
|
+
r = _zeros._brenth(f, a, b, xtol, rtol, maxiter, args, full_output, disp)
|
975
|
+
return results_c(full_output, r, "brenth")
|
976
|
+
|
977
|
+
|
978
|
+
################################
|
979
|
+
# TOMS "Algorithm 748: Enclosing Zeros of Continuous Functions", by
|
980
|
+
# Alefeld, G. E. and Potra, F. A. and Shi, Yixun,
|
981
|
+
# See [1]
|
982
|
+
|
983
|
+
|
984
|
+
def _notclose(fs, rtol=_rtol, atol=_xtol):
|
985
|
+
# Ensure not None, not 0, all finite, and not very close to each other
|
986
|
+
notclosefvals = (
|
987
|
+
all(fs) and all(np.isfinite(fs)) and
|
988
|
+
not any(any(np.isclose(_f, fs[i + 1:], rtol=rtol, atol=atol))
|
989
|
+
for i, _f in enumerate(fs[:-1])))
|
990
|
+
return notclosefvals
|
991
|
+
|
992
|
+
|
993
|
+
def _secant(xvals, fvals):
|
994
|
+
"""Perform a secant step, taking a little care"""
|
995
|
+
# Secant has many "mathematically" equivalent formulations
|
996
|
+
# x2 = x0 - (x1 - x0)/(f1 - f0) * f0
|
997
|
+
# = x1 - (x1 - x0)/(f1 - f0) * f1
|
998
|
+
# = (-x1 * f0 + x0 * f1) / (f1 - f0)
|
999
|
+
# = (-f0 / f1 * x1 + x0) / (1 - f0 / f1)
|
1000
|
+
# = (-f1 / f0 * x0 + x1) / (1 - f1 / f0)
|
1001
|
+
x0, x1 = xvals[:2]
|
1002
|
+
f0, f1 = fvals[:2]
|
1003
|
+
if f0 == f1:
|
1004
|
+
return np.nan
|
1005
|
+
if np.abs(f1) > np.abs(f0):
|
1006
|
+
x2 = (-f0 / f1 * x1 + x0) / (1 - f0 / f1)
|
1007
|
+
else:
|
1008
|
+
x2 = (-f1 / f0 * x0 + x1) / (1 - f1 / f0)
|
1009
|
+
return x2
|
1010
|
+
|
1011
|
+
|
1012
|
+
def _update_bracket(ab, fab, c, fc):
|
1013
|
+
"""Update a bracket given (c, fc), return the discarded endpoints."""
|
1014
|
+
fa, fb = fab
|
1015
|
+
idx = (0 if np.sign(fa) * np.sign(fc) > 0 else 1)
|
1016
|
+
rx, rfx = ab[idx], fab[idx]
|
1017
|
+
fab[idx] = fc
|
1018
|
+
ab[idx] = c
|
1019
|
+
return rx, rfx
|
1020
|
+
|
1021
|
+
|
1022
|
+
def _compute_divided_differences(xvals, fvals, N=None, full=True,
|
1023
|
+
forward=True):
|
1024
|
+
"""Return a matrix of divided differences for the xvals, fvals pairs
|
1025
|
+
|
1026
|
+
DD[i, j] = f[x_{i-j}, ..., x_i] for 0 <= j <= i
|
1027
|
+
|
1028
|
+
If full is False, just return the main diagonal(or last row):
|
1029
|
+
f[a], f[a, b] and f[a, b, c].
|
1030
|
+
If forward is False, return f[c], f[b, c], f[a, b, c]."""
|
1031
|
+
if full:
|
1032
|
+
if forward:
|
1033
|
+
xvals = np.asarray(xvals)
|
1034
|
+
else:
|
1035
|
+
xvals = np.array(xvals)[::-1]
|
1036
|
+
M = len(xvals)
|
1037
|
+
N = M if N is None else min(N, M)
|
1038
|
+
DD = np.zeros([M, N])
|
1039
|
+
DD[:, 0] = fvals[:]
|
1040
|
+
for i in range(1, N):
|
1041
|
+
DD[i:, i] = (np.diff(DD[i - 1:, i - 1]) /
|
1042
|
+
(xvals[i:] - xvals[:M - i]))
|
1043
|
+
return DD
|
1044
|
+
|
1045
|
+
xvals = np.asarray(xvals)
|
1046
|
+
dd = np.array(fvals)
|
1047
|
+
row = np.array(fvals)
|
1048
|
+
idx2Use = (0 if forward else -1)
|
1049
|
+
dd[0] = fvals[idx2Use]
|
1050
|
+
for i in range(1, len(xvals)):
|
1051
|
+
denom = xvals[i:i + len(row) - 1] - xvals[:len(row) - 1]
|
1052
|
+
row = np.diff(row)[:] / denom
|
1053
|
+
dd[i] = row[idx2Use]
|
1054
|
+
return dd
|
1055
|
+
|
1056
|
+
|
1057
|
+
def _interpolated_poly(xvals, fvals, x):
|
1058
|
+
"""Compute p(x) for the polynomial passing through the specified locations.
|
1059
|
+
|
1060
|
+
Use Neville's algorithm to compute p(x) where p is the minimal degree
|
1061
|
+
polynomial passing through the points xvals, fvals"""
|
1062
|
+
xvals = np.asarray(xvals)
|
1063
|
+
N = len(xvals)
|
1064
|
+
Q = np.zeros([N, N])
|
1065
|
+
D = np.zeros([N, N])
|
1066
|
+
Q[:, 0] = fvals[:]
|
1067
|
+
D[:, 0] = fvals[:]
|
1068
|
+
for k in range(1, N):
|
1069
|
+
alpha = D[k:, k - 1] - Q[k - 1:N - 1, k - 1]
|
1070
|
+
diffik = xvals[0:N - k] - xvals[k:N]
|
1071
|
+
Q[k:, k] = (xvals[k:] - x) / diffik * alpha
|
1072
|
+
D[k:, k] = (xvals[:N - k] - x) / diffik * alpha
|
1073
|
+
# Expect Q[-1, 1:] to be small relative to Q[-1, 0] as x approaches a root
|
1074
|
+
return np.sum(Q[-1, 1:]) + Q[-1, 0]
|
1075
|
+
|
1076
|
+
|
1077
|
+
def _inverse_poly_zero(a, b, c, d, fa, fb, fc, fd):
|
1078
|
+
"""Inverse cubic interpolation f-values -> x-values
|
1079
|
+
|
1080
|
+
Given four points (fa, a), (fb, b), (fc, c), (fd, d) with
|
1081
|
+
fa, fb, fc, fd all distinct, find poly IP(y) through the 4 points
|
1082
|
+
and compute x=IP(0).
|
1083
|
+
"""
|
1084
|
+
return _interpolated_poly([fa, fb, fc, fd], [a, b, c, d], 0)
|
1085
|
+
|
1086
|
+
|
1087
|
+
def _newton_quadratic(ab, fab, d, fd, k):
|
1088
|
+
"""Apply Newton-Raphson like steps, using divided differences to approximate f'
|
1089
|
+
|
1090
|
+
ab is a real interval [a, b] containing a root,
|
1091
|
+
fab holds the real values of f(a), f(b)
|
1092
|
+
d is a real number outside [ab, b]
|
1093
|
+
k is the number of steps to apply
|
1094
|
+
"""
|
1095
|
+
a, b = ab
|
1096
|
+
fa, fb = fab
|
1097
|
+
_, B, A = _compute_divided_differences([a, b, d], [fa, fb, fd],
|
1098
|
+
forward=True, full=False)
|
1099
|
+
|
1100
|
+
# _P is the quadratic polynomial through the 3 points
|
1101
|
+
def _P(x):
|
1102
|
+
# Horner evaluation of fa + B * (x - a) + A * (x - a) * (x - b)
|
1103
|
+
return (A * (x - b) + B) * (x - a) + fa
|
1104
|
+
|
1105
|
+
if A == 0:
|
1106
|
+
r = a - fa / B
|
1107
|
+
else:
|
1108
|
+
r = (a if np.sign(A) * np.sign(fa) > 0 else b)
|
1109
|
+
# Apply k Newton-Raphson steps to _P(x), starting from x=r
|
1110
|
+
for i in range(k):
|
1111
|
+
r1 = r - _P(r) / (B + A * (2 * r - a - b))
|
1112
|
+
if not (ab[0] < r1 < ab[1]):
|
1113
|
+
if (ab[0] < r < ab[1]):
|
1114
|
+
return r
|
1115
|
+
r = sum(ab) / 2.0
|
1116
|
+
break
|
1117
|
+
r = r1
|
1118
|
+
|
1119
|
+
return r
|
1120
|
+
|
1121
|
+
|
1122
|
+
class TOMS748Solver:
|
1123
|
+
"""Solve f(x, *args) == 0 using Algorithm748 of Alefeld, Potro & Shi.
|
1124
|
+
"""
|
1125
|
+
_MU = 0.5
|
1126
|
+
_K_MIN = 1
|
1127
|
+
_K_MAX = 100 # A very high value for real usage. Expect 1, 2, maybe 3.
|
1128
|
+
|
1129
|
+
def __init__(self):
|
1130
|
+
self.f = None
|
1131
|
+
self.args = None
|
1132
|
+
self.function_calls = 0
|
1133
|
+
self.iterations = 0
|
1134
|
+
self.k = 2
|
1135
|
+
# ab=[a,b] is a global interval containing a root
|
1136
|
+
self.ab = [np.nan, np.nan]
|
1137
|
+
# fab is function values at a, b
|
1138
|
+
self.fab = [np.nan, np.nan]
|
1139
|
+
self.d = None
|
1140
|
+
self.fd = None
|
1141
|
+
self.e = None
|
1142
|
+
self.fe = None
|
1143
|
+
self.disp = False
|
1144
|
+
self.xtol = _xtol
|
1145
|
+
self.rtol = _rtol
|
1146
|
+
self.maxiter = _iter
|
1147
|
+
|
1148
|
+
def configure(self, xtol, rtol, maxiter, disp, k):
|
1149
|
+
self.disp = disp
|
1150
|
+
self.xtol = xtol
|
1151
|
+
self.rtol = rtol
|
1152
|
+
self.maxiter = maxiter
|
1153
|
+
# Silently replace a low value of k with 1
|
1154
|
+
self.k = max(k, self._K_MIN)
|
1155
|
+
# Noisily replace a high value of k with self._K_MAX
|
1156
|
+
if self.k > self._K_MAX:
|
1157
|
+
msg = f"toms748: Overriding k: ->{self._K_MAX}"
|
1158
|
+
warnings.warn(msg, RuntimeWarning, stacklevel=3)
|
1159
|
+
self.k = self._K_MAX
|
1160
|
+
|
1161
|
+
def _callf(self, x, error=True):
|
1162
|
+
"""Call the user-supplied function, update book-keeping"""
|
1163
|
+
fx = self.f(x, *self.args)
|
1164
|
+
self.function_calls += 1
|
1165
|
+
if not np.isfinite(fx) and error:
|
1166
|
+
raise ValueError(f"Invalid function value: f({x:f}) -> {fx} ")
|
1167
|
+
return fx
|
1168
|
+
|
1169
|
+
def get_result(self, x, flag=_ECONVERGED):
|
1170
|
+
r"""Package the result and statistics into a tuple."""
|
1171
|
+
return (x, self.function_calls, self.iterations, flag)
|
1172
|
+
|
1173
|
+
def _update_bracket(self, c, fc):
|
1174
|
+
return _update_bracket(self.ab, self.fab, c, fc)
|
1175
|
+
|
1176
|
+
def start(self, f, a, b, args=()):
|
1177
|
+
r"""Prepare for the iterations."""
|
1178
|
+
self.function_calls = 0
|
1179
|
+
self.iterations = 0
|
1180
|
+
|
1181
|
+
self.f = f
|
1182
|
+
self.args = args
|
1183
|
+
self.ab[:] = [a, b]
|
1184
|
+
if not np.isfinite(a) or np.imag(a) != 0:
|
1185
|
+
raise ValueError(f"Invalid x value: {a} ")
|
1186
|
+
if not np.isfinite(b) or np.imag(b) != 0:
|
1187
|
+
raise ValueError(f"Invalid x value: {b} ")
|
1188
|
+
|
1189
|
+
fa = self._callf(a)
|
1190
|
+
if not np.isfinite(fa) or np.imag(fa) != 0:
|
1191
|
+
raise ValueError(f"Invalid function value: f({a:f}) -> {fa} ")
|
1192
|
+
if fa == 0:
|
1193
|
+
return _ECONVERGED, a
|
1194
|
+
fb = self._callf(b)
|
1195
|
+
if not np.isfinite(fb) or np.imag(fb) != 0:
|
1196
|
+
raise ValueError(f"Invalid function value: f({b:f}) -> {fb} ")
|
1197
|
+
if fb == 0:
|
1198
|
+
return _ECONVERGED, b
|
1199
|
+
|
1200
|
+
if np.sign(fb) * np.sign(fa) > 0:
|
1201
|
+
raise ValueError("f(a) and f(b) must have different signs, but "
|
1202
|
+
f"f({a:e})={fa:e}, f({b:e})={fb:e} ")
|
1203
|
+
self.fab[:] = [fa, fb]
|
1204
|
+
|
1205
|
+
return _EINPROGRESS, sum(self.ab) / 2.0
|
1206
|
+
|
1207
|
+
def get_status(self):
|
1208
|
+
"""Determine the current status."""
|
1209
|
+
a, b = self.ab[:2]
|
1210
|
+
if np.isclose(a, b, rtol=self.rtol, atol=self.xtol):
|
1211
|
+
return _ECONVERGED, sum(self.ab) / 2.0
|
1212
|
+
if self.iterations >= self.maxiter:
|
1213
|
+
return _ECONVERR, sum(self.ab) / 2.0
|
1214
|
+
return _EINPROGRESS, sum(self.ab) / 2.0
|
1215
|
+
|
1216
|
+
def iterate(self):
|
1217
|
+
"""Perform one step in the algorithm.
|
1218
|
+
|
1219
|
+
Implements Algorithm 4.1(k=1) or 4.2(k=2) in [APS1995]
|
1220
|
+
"""
|
1221
|
+
self.iterations += 1
|
1222
|
+
eps = np.finfo(float).eps
|
1223
|
+
d, fd, e, fe = self.d, self.fd, self.e, self.fe
|
1224
|
+
ab_width = self.ab[1] - self.ab[0] # Need the start width below
|
1225
|
+
c = None
|
1226
|
+
|
1227
|
+
for nsteps in range(2, self.k+2):
|
1228
|
+
# If the f-values are sufficiently separated, perform an inverse
|
1229
|
+
# polynomial interpolation step. Otherwise, nsteps repeats of
|
1230
|
+
# an approximate Newton-Raphson step.
|
1231
|
+
if _notclose(self.fab + [fd, fe], rtol=0, atol=32*eps):
|
1232
|
+
c0 = _inverse_poly_zero(self.ab[0], self.ab[1], d, e,
|
1233
|
+
self.fab[0], self.fab[1], fd, fe)
|
1234
|
+
if self.ab[0] < c0 < self.ab[1]:
|
1235
|
+
c = c0
|
1236
|
+
if c is None:
|
1237
|
+
c = _newton_quadratic(self.ab, self.fab, d, fd, nsteps)
|
1238
|
+
|
1239
|
+
fc = self._callf(c)
|
1240
|
+
if fc == 0:
|
1241
|
+
return _ECONVERGED, c
|
1242
|
+
|
1243
|
+
# re-bracket
|
1244
|
+
e, fe = d, fd
|
1245
|
+
d, fd = self._update_bracket(c, fc)
|
1246
|
+
|
1247
|
+
# u is the endpoint with the smallest f-value
|
1248
|
+
uix = (0 if np.abs(self.fab[0]) < np.abs(self.fab[1]) else 1)
|
1249
|
+
u, fu = self.ab[uix], self.fab[uix]
|
1250
|
+
|
1251
|
+
_, A = _compute_divided_differences(self.ab, self.fab,
|
1252
|
+
forward=(uix == 0), full=False)
|
1253
|
+
c = u - 2 * fu / A
|
1254
|
+
if np.abs(c - u) > 0.5 * (self.ab[1] - self.ab[0]):
|
1255
|
+
c = sum(self.ab) / 2.0
|
1256
|
+
else:
|
1257
|
+
if np.isclose(c, u, rtol=eps, atol=0):
|
1258
|
+
# c didn't change (much).
|
1259
|
+
# Either because the f-values at the endpoints have vastly
|
1260
|
+
# differing magnitudes, or because the root is very close to
|
1261
|
+
# that endpoint
|
1262
|
+
frs = np.frexp(self.fab)[1]
|
1263
|
+
if frs[uix] < frs[1 - uix] - 50: # Differ by more than 2**50
|
1264
|
+
c = (31 * self.ab[uix] + self.ab[1 - uix]) / 32
|
1265
|
+
else:
|
1266
|
+
# Make a bigger adjustment, about the
|
1267
|
+
# size of the requested tolerance.
|
1268
|
+
mm = (1 if uix == 0 else -1)
|
1269
|
+
adj = mm * np.abs(c) * self.rtol + mm * self.xtol
|
1270
|
+
c = u + adj
|
1271
|
+
if not self.ab[0] < c < self.ab[1]:
|
1272
|
+
c = sum(self.ab) / 2.0
|
1273
|
+
|
1274
|
+
fc = self._callf(c)
|
1275
|
+
if fc == 0:
|
1276
|
+
return _ECONVERGED, c
|
1277
|
+
|
1278
|
+
e, fe = d, fd
|
1279
|
+
d, fd = self._update_bracket(c, fc)
|
1280
|
+
|
1281
|
+
# If the width of the new interval did not decrease enough, bisect
|
1282
|
+
if self.ab[1] - self.ab[0] > self._MU * ab_width:
|
1283
|
+
e, fe = d, fd
|
1284
|
+
z = sum(self.ab) / 2.0
|
1285
|
+
fz = self._callf(z)
|
1286
|
+
if fz == 0:
|
1287
|
+
return _ECONVERGED, z
|
1288
|
+
d, fd = self._update_bracket(z, fz)
|
1289
|
+
|
1290
|
+
# Record d and e for next iteration
|
1291
|
+
self.d, self.fd = d, fd
|
1292
|
+
self.e, self.fe = e, fe
|
1293
|
+
|
1294
|
+
status, xn = self.get_status()
|
1295
|
+
return status, xn
|
1296
|
+
|
1297
|
+
def solve(self, f, a, b, args=(),
|
1298
|
+
xtol=_xtol, rtol=_rtol, k=2, maxiter=_iter, disp=True):
|
1299
|
+
r"""Solve f(x) = 0 given an interval containing a root."""
|
1300
|
+
self.configure(xtol=xtol, rtol=rtol, maxiter=maxiter, disp=disp, k=k)
|
1301
|
+
status, xn = self.start(f, a, b, args)
|
1302
|
+
if status == _ECONVERGED:
|
1303
|
+
return self.get_result(xn)
|
1304
|
+
|
1305
|
+
# The first step only has two x-values.
|
1306
|
+
c = _secant(self.ab, self.fab)
|
1307
|
+
if not self.ab[0] < c < self.ab[1]:
|
1308
|
+
c = sum(self.ab) / 2.0
|
1309
|
+
fc = self._callf(c)
|
1310
|
+
if fc == 0:
|
1311
|
+
return self.get_result(c)
|
1312
|
+
|
1313
|
+
self.d, self.fd = self._update_bracket(c, fc)
|
1314
|
+
self.e, self.fe = None, None
|
1315
|
+
self.iterations += 1
|
1316
|
+
|
1317
|
+
while True:
|
1318
|
+
status, xn = self.iterate()
|
1319
|
+
if status == _ECONVERGED:
|
1320
|
+
return self.get_result(xn)
|
1321
|
+
if status == _ECONVERR:
|
1322
|
+
fmt = "Failed to converge after %d iterations, bracket is %s"
|
1323
|
+
if disp:
|
1324
|
+
msg = fmt % (self.iterations + 1, self.ab)
|
1325
|
+
raise RuntimeError(msg)
|
1326
|
+
return self.get_result(xn, _ECONVERR)
|
1327
|
+
|
1328
|
+
|
1329
|
+
def toms748(f, a, b, args=(), k=1,
|
1330
|
+
xtol=_xtol, rtol=_rtol, maxiter=_iter,
|
1331
|
+
full_output=False, disp=True):
|
1332
|
+
"""
|
1333
|
+
Find a root using TOMS Algorithm 748 method.
|
1334
|
+
|
1335
|
+
Implements the Algorithm 748 method of Alefeld, Potro and Shi to find a
|
1336
|
+
root of the function `f` on the interval ``[a , b]``, where ``f(a)`` and
|
1337
|
+
`f(b)` must have opposite signs.
|
1338
|
+
|
1339
|
+
It uses a mixture of inverse cubic interpolation and
|
1340
|
+
"Newton-quadratic" steps. [APS1995].
|
1341
|
+
|
1342
|
+
Parameters
|
1343
|
+
----------
|
1344
|
+
f : function
|
1345
|
+
Python function returning a scalar. The function :math:`f`
|
1346
|
+
must be continuous, and :math:`f(a)` and :math:`f(b)`
|
1347
|
+
have opposite signs.
|
1348
|
+
a : scalar,
|
1349
|
+
lower boundary of the search interval
|
1350
|
+
b : scalar,
|
1351
|
+
upper boundary of the search interval
|
1352
|
+
args : tuple, optional
|
1353
|
+
containing extra arguments for the function `f`.
|
1354
|
+
`f` is called by ``f(x, *args)``.
|
1355
|
+
k : int, optional
|
1356
|
+
The number of Newton quadratic steps to perform each
|
1357
|
+
iteration. ``k>=1``.
|
1358
|
+
xtol : scalar, optional
|
1359
|
+
The computed root ``x0`` will satisfy ``np.isclose(x, x0,
|
1360
|
+
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
1361
|
+
parameter must be positive.
|
1362
|
+
rtol : scalar, optional
|
1363
|
+
The computed root ``x0`` will satisfy ``np.isclose(x, x0,
|
1364
|
+
atol=xtol, rtol=rtol)``, where ``x`` is the exact root.
|
1365
|
+
maxiter : int, optional
|
1366
|
+
If convergence is not achieved in `maxiter` iterations, an error is
|
1367
|
+
raised. Must be >= 0.
|
1368
|
+
full_output : bool, optional
|
1369
|
+
If `full_output` is False, the root is returned. If `full_output` is
|
1370
|
+
True, the return value is ``(x, r)``, where `x` is the root, and `r` is
|
1371
|
+
a `RootResults` object.
|
1372
|
+
disp : bool, optional
|
1373
|
+
If True, raise RuntimeError if the algorithm didn't converge.
|
1374
|
+
Otherwise, the convergence status is recorded in the `RootResults`
|
1375
|
+
return object.
|
1376
|
+
|
1377
|
+
Returns
|
1378
|
+
-------
|
1379
|
+
root : float
|
1380
|
+
Approximate root of `f`
|
1381
|
+
r : `RootResults` (present if ``full_output = True``)
|
1382
|
+
Object containing information about the convergence. In particular,
|
1383
|
+
``r.converged`` is True if the routine converged.
|
1384
|
+
|
1385
|
+
See Also
|
1386
|
+
--------
|
1387
|
+
brentq, brenth, ridder, bisect, newton
|
1388
|
+
fsolve : find roots in N dimensions.
|
1389
|
+
elementwise.find_root : efficient elementwise 1-D root-finder
|
1390
|
+
|
1391
|
+
Notes
|
1392
|
+
-----
|
1393
|
+
`f` must be continuous.
|
1394
|
+
Algorithm 748 with ``k=2`` is asymptotically the most efficient
|
1395
|
+
algorithm known for finding roots of a four times continuously
|
1396
|
+
differentiable function.
|
1397
|
+
In contrast with Brent's algorithm, which may only decrease the length of
|
1398
|
+
the enclosing bracket on the last step, Algorithm 748 decreases it each
|
1399
|
+
iteration with the same asymptotic efficiency as it finds the root.
|
1400
|
+
|
1401
|
+
For easy statement of efficiency indices, assume that `f` has 4
|
1402
|
+
continuous deriviatives.
|
1403
|
+
For ``k=1``, the convergence order is at least 2.7, and with about
|
1404
|
+
asymptotically 2 function evaluations per iteration, the efficiency
|
1405
|
+
index is approximately 1.65.
|
1406
|
+
For ``k=2``, the order is about 4.6 with asymptotically 3 function
|
1407
|
+
evaluations per iteration, and the efficiency index 1.66.
|
1408
|
+
For higher values of `k`, the efficiency index approaches
|
1409
|
+
the kth root of ``(3k-2)``, hence ``k=1`` or ``k=2`` are
|
1410
|
+
usually appropriate.
|
1411
|
+
|
1412
|
+
As mentioned in the parameter documentation, the computed root ``x0`` will
|
1413
|
+
satisfy ``np.isclose(x, x0, atol=xtol, rtol=rtol)``, where ``x`` is the
|
1414
|
+
exact root. In equation form, this terminating condition is ``abs(x - x0)
|
1415
|
+
<= xtol + rtol * abs(x0)``.
|
1416
|
+
|
1417
|
+
The default value ``xtol=2e-12`` may lead to surprising behavior if one
|
1418
|
+
expects `toms748` to always compute roots with relative error near machine
|
1419
|
+
precision. Care should be taken to select `xtol` for the use case at hand.
|
1420
|
+
Setting ``xtol=5e-324``, the smallest subnormal number, will ensure the
|
1421
|
+
highest level of accuracy. Larger values of `xtol` may be useful for saving
|
1422
|
+
function evaluations when a root is at or near zero in applications where
|
1423
|
+
the tiny absolute differences available between floating point numbers near
|
1424
|
+
zero are not meaningful.
|
1425
|
+
|
1426
|
+
References
|
1427
|
+
----------
|
1428
|
+
.. [APS1995]
|
1429
|
+
Alefeld, G. E. and Potra, F. A. and Shi, Yixun,
|
1430
|
+
*Algorithm 748: Enclosing Zeros of Continuous Functions*,
|
1431
|
+
ACM Trans. Math. Softw. Volume 221(1995)
|
1432
|
+
doi = {10.1145/210089.210111}
|
1433
|
+
|
1434
|
+
Examples
|
1435
|
+
--------
|
1436
|
+
>>> def f(x):
|
1437
|
+
... return (x**3 - 1) # only one real root at x = 1
|
1438
|
+
|
1439
|
+
>>> from scipy import optimize
|
1440
|
+
>>> root, results = optimize.toms748(f, 0, 2, full_output=True)
|
1441
|
+
>>> root
|
1442
|
+
1.0
|
1443
|
+
>>> results
|
1444
|
+
converged: True
|
1445
|
+
flag: converged
|
1446
|
+
function_calls: 11
|
1447
|
+
iterations: 5
|
1448
|
+
root: 1.0
|
1449
|
+
method: toms748
|
1450
|
+
"""
|
1451
|
+
if xtol <= 0:
|
1452
|
+
raise ValueError(f"xtol too small ({xtol:g} <= 0)")
|
1453
|
+
if rtol < _rtol / 4:
|
1454
|
+
raise ValueError(f"rtol too small ({rtol:g} < {_rtol/4:g})")
|
1455
|
+
maxiter = operator.index(maxiter)
|
1456
|
+
if maxiter < 1:
|
1457
|
+
raise ValueError("maxiter must be greater than 0")
|
1458
|
+
if not np.isfinite(a):
|
1459
|
+
raise ValueError(f"a is not finite {a}")
|
1460
|
+
if not np.isfinite(b):
|
1461
|
+
raise ValueError(f"b is not finite {b}")
|
1462
|
+
if a >= b:
|
1463
|
+
raise ValueError(f"a and b are not an interval [{a}, {b}]")
|
1464
|
+
if not k >= 1:
|
1465
|
+
raise ValueError(f"k too small ({k} < 1)")
|
1466
|
+
|
1467
|
+
if not isinstance(args, tuple):
|
1468
|
+
args = (args,)
|
1469
|
+
f = _wrap_nan_raise(f)
|
1470
|
+
solver = TOMS748Solver()
|
1471
|
+
result = solver.solve(f, a, b, args=args, k=k, xtol=xtol, rtol=rtol,
|
1472
|
+
maxiter=maxiter, disp=disp)
|
1473
|
+
x, function_calls, iterations, flag = result
|
1474
|
+
return _results_select(full_output, (x, function_calls, iterations, flag),
|
1475
|
+
"toms748")
|