scikit-complexity 0.2.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scikit_complexity-0.2.0.dist-info/METADATA +317 -0
- scikit_complexity-0.2.0.dist-info/RECORD +1748 -0
- scikit_complexity-0.2.0.dist-info/WHEEL +4 -0
- scikit_complexity-0.2.0.dist-info/entry_points.txt +4 -0
- scikit_complexity-0.2.0.dist-info/licenses/LICENSE +21 -0
- skcomplex/__init__.py +1 -0
- skcomplex/analysis/__init__.py +101 -0
- skcomplex/analysis/_alignment.py +263 -0
- skcomplex/analysis/_automata.py +658 -0
- skcomplex/analysis/_base.py +841 -0
- skcomplex/analysis/_clusters.py +298 -0
- skcomplex/analysis/_coarse_grain.py +183 -0
- skcomplex/analysis/_collapse.py +318 -0
- skcomplex/analysis/_complexity.py +129 -0
- skcomplex/analysis/_computational_mechanics.py +220 -0
- skcomplex/analysis/_correlation.py +364 -0
- skcomplex/analysis/_defects.py +111 -0
- skcomplex/analysis/_discovery.py +101 -0
- skcomplex/analysis/_displacement.py +135 -0
- skcomplex/analysis/_distribution.py +327 -0
- skcomplex/analysis/_domains.py +220 -0
- skcomplex/analysis/_embedding.py +235 -0
- skcomplex/analysis/_emergence.py +503 -0
- skcomplex/analysis/_entropy.py +425 -0
- skcomplex/analysis/_ergodicity.py +228 -0
- skcomplex/analysis/_events.py +301 -0
- skcomplex/analysis/_fit.py +368 -0
- skcomplex/analysis/_groups.py +205 -0
- skcomplex/analysis/_information.py +488 -0
- skcomplex/analysis/_invariants.py +409 -0
- skcomplex/analysis/_irreversibility.py +421 -0
- skcomplex/analysis/_kramers_moyal.py +104 -0
- skcomplex/analysis/_large_deviations.py +378 -0
- skcomplex/analysis/_linearization.py +231 -0
- skcomplex/analysis/_local_information.py +166 -0
- skcomplex/analysis/_loops.py +394 -0
- skcomplex/analysis/_lyapunov.py +342 -0
- skcomplex/analysis/_markov.py +303 -0
- skcomplex/analysis/_mode_decomposition.py +209 -0
- skcomplex/analysis/_motifs.py +239 -0
- skcomplex/analysis/_neighbors.py +303 -0
- skcomplex/analysis/_networks.py +286 -0
- skcomplex/analysis/_operator.py +312 -0
- skcomplex/analysis/_partial_information.py +118 -0
- skcomplex/analysis/_passage.py +244 -0
- skcomplex/analysis/_recurrence.py +202 -0
- skcomplex/analysis/_reservoirs.py +387 -0
- skcomplex/analysis/_rolling.py +168 -0
- skcomplex/analysis/_scaling.py +370 -0
- skcomplex/analysis/_sections.py +225 -0
- skcomplex/analysis/_signatures.py +250 -0
- skcomplex/analysis/_sparse_identification.py +398 -0
- skcomplex/analysis/_spectrum.py +164 -0
- skcomplex/analysis/_stability.py +547 -0
- skcomplex/analysis/_surrogates.py +127 -0
- skcomplex/analysis/_symbolic.py +639 -0
- skcomplex/analysis/types.py +43 -0
- skcomplex/base.py +159 -0
- skcomplex/core/__init__.py +1 -0
- skcomplex/core/base.py +150 -0
- skcomplex/core/elements/__init__.py +21 -0
- skcomplex/core/elements/_base.py +84 -0
- skcomplex/core/elements/_compartment.py +52 -0
- skcomplex/core/elements/_density.py +52 -0
- skcomplex/core/elements/_element.py +80 -0
- skcomplex/core/elements/_field.py +192 -0
- skcomplex/core/elements/_group.py +241 -0
- skcomplex/core/elements/_lattice.py +115 -0
- skcomplex/core/elements/_point.py +66 -0
- skcomplex/core/interactions/__init__.py +89 -0
- skcomplex/core/interactions/_advection.py +134 -0
- skcomplex/core/interactions/_base.py +361 -0
- skcomplex/core/interactions/_cascade.py +195 -0
- skcomplex/core/interactions/_choice.py +320 -0
- skcomplex/core/interactions/_conservation.py +164 -0
- skcomplex/core/interactions/_coupling.py +741 -0
- skcomplex/core/interactions/_crossing.py +136 -0
- skcomplex/core/interactions/_diffusion.py +99 -0
- skcomplex/core/interactions/_encounter.py +201 -0
- skcomplex/core/interactions/_euler_lagrange.py +183 -0
- skcomplex/core/interactions/_evolution.py +520 -0
- skcomplex/core/interactions/_feedback.py +79 -0
- skcomplex/core/interactions/_gradient.py +293 -0
- skcomplex/core/interactions/_grouping.py +399 -0
- skcomplex/core/interactions/_hamiltonian.py +191 -0
- skcomplex/core/interactions/_hyperedge.py +96 -0
- skcomplex/core/interactions/_imitation.py +357 -0
- skcomplex/core/interactions/_impulse.py +133 -0
- skcomplex/core/interactions/_interaction.py +58 -0
- skcomplex/core/interactions/_jump.py +201 -0
- skcomplex/core/interactions/_life_cycle.py +424 -0
- skcomplex/core/interactions/_local_rule.py +134 -0
- skcomplex/core/interactions/_map.py +239 -0
- skcomplex/core/interactions/_matching.py +701 -0
- skcomplex/core/interactions/_movement.py +377 -0
- skcomplex/core/interactions/_neighbor.py +88 -0
- skcomplex/core/interactions/_optimization.py +206 -0
- skcomplex/core/interactions/_pair.py +82 -0
- skcomplex/core/interactions/_pair_coupling.py +169 -0
- skcomplex/core/interactions/_rate.py +240 -0
- skcomplex/core/interactions/_reaction.py +466 -0
- skcomplex/core/interactions/_reinforcement.py +226 -0
- skcomplex/core/interactions/_relaxation.py +103 -0
- skcomplex/core/interactions/_sampling.py +177 -0
- skcomplex/core/interactions/_satisfiability.py +145 -0
- skcomplex/core/interactions/_sign_adjustment.py +222 -0
- skcomplex/core/interactions/_topology.py +215 -0
- skcomplex/core/interactions/_training.py +184 -0
- skcomplex/core/interactions/_transfer.py +669 -0
- skcomplex/core/interactions/_transition.py +427 -0
- skcomplex/core/laws/__init__.py +60 -0
- skcomplex/core/laws/_base.py +194 -0
- skcomplex/core/laws/_bilinear.py +91 -0
- skcomplex/core/laws/_boundary.py +59 -0
- skcomplex/core/laws/_cascade.py +79 -0
- skcomplex/core/laws/_crossing.py +87 -0
- skcomplex/core/laws/_dissipator.py +79 -0
- skcomplex/core/laws/_drive.py +56 -0
- skcomplex/core/laws/_emission.py +81 -0
- skcomplex/core/laws/_encounter.py +96 -0
- skcomplex/core/laws/_equation.py +105 -0
- skcomplex/core/laws/_extremal.py +94 -0
- skcomplex/core/laws/_flux.py +108 -0
- skcomplex/core/laws/_fractional_noise.py +65 -0
- skcomplex/core/laws/_generator.py +66 -0
- skcomplex/core/laws/_gradient_step.py +89 -0
- skcomplex/core/laws/_jump.py +137 -0
- skcomplex/core/laws/_local_rule.py +92 -0
- skcomplex/core/laws/_match.py +321 -0
- skcomplex/core/laws/_noise.py +125 -0
- skcomplex/core/laws/_rate.py +82 -0
- skcomplex/core/laws/_rule.py +82 -0
- skcomplex/core/laws/_sample.py +65 -0
- skcomplex/core/laws/_transfer.py +165 -0
- skcomplex/core/laws/_transition.py +77 -0
- skcomplex/core/laws/_update.py +121 -0
- skcomplex/core/laws/utils/__init__.py +142 -0
- skcomplex/core/laws/utils/_agents.py +127 -0
- skcomplex/core/laws/utils/_components.py +63 -0
- skcomplex/core/laws/utils/_conditions.py +198 -0
- skcomplex/core/laws/utils/_contractions.py +74 -0
- skcomplex/core/laws/utils/_delays.py +170 -0
- skcomplex/core/laws/utils/_history.py +167 -0
- skcomplex/core/laws/utils/_local_operators.py +68 -0
- skcomplex/core/laws/utils/_lookups.py +40 -0
- skcomplex/core/laws/utils/_moments.py +122 -0
- skcomplex/core/laws/utils/_operators.py +237 -0
- skcomplex/core/laws/utils/_phase.py +126 -0
- skcomplex/core/laws/utils/_pointwise.py +160 -0
- skcomplex/core/laws/utils/_reductions.py +942 -0
- skcomplex/core/laws/utils/_signals.py +214 -0
- skcomplex/core/laws/utils/_tables.py +4 -0
- skcomplex/core/laws/utils/_tensors.py +235 -0
- skcomplex/core/spaces/__init__.py +52 -0
- skcomplex/core/spaces/_adjacency.py +34 -0
- skcomplex/core/spaces/_base.py +218 -0
- skcomplex/core/spaces/_box.py +41 -0
- skcomplex/core/spaces/_cayley.py +352 -0
- skcomplex/core/spaces/_cone.py +65 -0
- skcomplex/core/spaces/_continuous.py +93 -0
- skcomplex/core/spaces/_continuous_time.py +27 -0
- skcomplex/core/spaces/_discrete_time.py +53 -0
- skcomplex/core/spaces/_generator.py +51 -0
- skcomplex/core/spaces/_lattice.py +194 -0
- skcomplex/core/spaces/_lattice_neighborhood.py +50 -0
- skcomplex/core/spaces/_memory.py +45 -0
- skcomplex/core/spaces/_mesh.py +71 -0
- skcomplex/core/spaces/_moore.py +49 -0
- skcomplex/core/spaces/_nearest.py +41 -0
- skcomplex/core/spaces/_network.py +256 -0
- skcomplex/core/spaces/_phase.py +136 -0
- skcomplex/core/spaces/_radius.py +40 -0
- skcomplex/core/spaces/_static_time.py +34 -0
- skcomplex/core/spaces/_triangular.py +37 -0
- skcomplex/core/spaces/_von_neumann.py +51 -0
- skcomplex/core/specs/__init__.py +25 -0
- skcomplex/core/specs/_census_record_spec.py +72 -0
- skcomplex/core/specs/_census_spec.py +40 -0
- skcomplex/core/specs/_compiled_agents_spec.py +62 -0
- skcomplex/core/specs/_compiled_element_spec.py +59 -0
- skcomplex/core/specs/_compiled_interaction_spec.py +33 -0
- skcomplex/core/specs/_lattice_context_spec.py +40 -0
- skcomplex/core/specs/_lattice_state_spec.py +49 -0
- skcomplex/core/specs/_node_spec.py +64 -0
- skcomplex/core/specs/_operator_view_spec.py +135 -0
- skcomplex/core/specs/_scenario_spec.py +45 -0
- skcomplex/core/specs/_subsystem_spec.py +24 -0
- skcomplex/core/system.py +140 -0
- skcomplex/core/types.py +249 -0
- skcomplex/engine/__init__.py +5 -0
- skcomplex/engine/_utils.py +278 -0
- skcomplex/engine/backends/__init__.py +13 -0
- skcomplex/engine/backends/_base.py +329 -0
- skcomplex/engine/backends/_jax.py +285 -0
- skcomplex/engine/backends/_numba.py +601 -0
- skcomplex/engine/backends/_numba_components.py +67 -0
- skcomplex/engine/backends/_numba_loops.py +163 -0
- skcomplex/engine/backends/_numba_neighbours.py +435 -0
- skcomplex/engine/backends/_numba_printer.py +1023 -0
- skcomplex/engine/backends/_numba_stencils.py +66 -0
- skcomplex/engine/backends/_numpy.py +215 -0
- skcomplex/engine/compile/__init__.py +27 -0
- skcomplex/engine/compile/_base.py +582 -0
- skcomplex/engine/compile/_bound_renewal_spec.py +47 -0
- skcomplex/engine/compile/_compilation.py +351 -0
- skcomplex/engine/compile/_compile.py +100 -0
- skcomplex/engine/compile/_complex.py +216 -0
- skcomplex/engine/compile/_draw_lowering.py +373 -0
- skcomplex/engine/compile/_field_lowering.py +1668 -0
- skcomplex/engine/compile/_flows.py +691 -0
- skcomplex/engine/compile/_forms.py +48 -0
- skcomplex/engine/compile/_laws.py +42 -0
- skcomplex/engine/compile/_learning_compiler.py +481 -0
- skcomplex/engine/compile/_member_reductions.py +206 -0
- skcomplex/engine/compile/_members.py +244 -0
- skcomplex/engine/compile/_observables.py +940 -0
- skcomplex/engine/compile/_observer.py +185 -0
- skcomplex/engine/compile/_pass_compiler.py +1534 -0
- skcomplex/engine/compile/_probe.py +78 -0
- skcomplex/engine/compile/_renewal_law.py +70 -0
- skcomplex/engine/compile/passes/__init__.py +34 -0
- skcomplex/engine/compile/passes/_agents.py +111 -0
- skcomplex/engine/compile/passes/_agents_problem.py +143 -0
- skcomplex/engine/compile/passes/_census.py +808 -0
- skcomplex/engine/compile/passes/_check_fractional_noise.py +107 -0
- skcomplex/engine/compile/passes/_collect.py +31 -0
- skcomplex/engine/compile/passes/_compile_encounters.py +301 -0
- skcomplex/engine/compile/passes/_complex.py +198 -0
- skcomplex/engine/compile/passes/_conserved_noise.py +224 -0
- skcomplex/engine/compile/passes/_core.py +116 -0
- skcomplex/engine/compile/passes/_declare_renewals.py +84 -0
- skcomplex/engine/compile/passes/_draws.py +29 -0
- skcomplex/engine/compile/passes/_encounter_functions.py +60 -0
- skcomplex/engine/compile/passes/_encounter_jacobian.py +25 -0
- skcomplex/engine/compile/passes/_encounter_problem.py +32 -0
- skcomplex/engine/compile/passes/_events.py +204 -0
- skcomplex/engine/compile/passes/_expand_flows.py +32 -0
- skcomplex/engine/compile/passes/_field_functions.py +647 -0
- skcomplex/engine/compile/passes/_field_jacobian.py +38 -0
- skcomplex/engine/compile/passes/_field_problem.py +106 -0
- skcomplex/engine/compile/passes/_flatten.py +339 -0
- skcomplex/engine/compile/passes/_flows_problem.py +29 -0
- skcomplex/engine/compile/passes/_form.py +82 -0
- skcomplex/engine/compile/passes/_fractional_form.py +172 -0
- skcomplex/engine/compile/passes/_fractional_problem.py +91 -0
- skcomplex/engine/compile/passes/_functions.py +485 -0
- skcomplex/engine/compile/passes/_hilbert_space_error.py +10 -0
- skcomplex/engine/compile/passes/_hyperedges.py +598 -0
- skcomplex/engine/compile/passes/_jacobian.py +38 -0
- skcomplex/engine/compile/passes/_kernels.py +407 -0
- skcomplex/engine/compile/passes/_lattices.py +818 -0
- skcomplex/engine/compile/passes/_layout.py +667 -0
- skcomplex/engine/compile/passes/_lower_fields.py +225 -0
- skcomplex/engine/compile/passes/_lower_flows.py +28 -0
- skcomplex/engine/compile/passes/_markov.py +329 -0
- skcomplex/engine/compile/passes/_mask_requests.py +121 -0
- skcomplex/engine/compile/passes/_members.py +30 -0
- skcomplex/engine/compile/passes/_noise.py +196 -0
- skcomplex/engine/compile/passes/_operator_compiler.py +843 -0
- skcomplex/engine/compile/passes/_orders.py +409 -0
- skcomplex/engine/compile/passes/_owners.py +90 -0
- skcomplex/engine/compile/passes/_particles.py +69 -0
- skcomplex/engine/compile/passes/_plan.py +130 -0
- skcomplex/engine/compile/passes/_problem.py +802 -0
- skcomplex/engine/compile/passes/_reduction_lowering.py +1193 -0
- skcomplex/engine/compile/passes/_reductions.py +84 -0
- skcomplex/engine/compile/passes/_renewal_problem.py +357 -0
- skcomplex/engine/compile/passes/_request_jumps.py +51 -0
- skcomplex/engine/compile/passes/_residences.py +140 -0
- skcomplex/engine/compile/passes/_rows.py +162 -0
- skcomplex/engine/compile/passes/_set_renewals_apart.py +29 -0
- skcomplex/engine/compile/passes/_set_rules_apart.py +28 -0
- skcomplex/engine/compile/passes/_specs.py +1317 -0
- skcomplex/engine/compile/passes/_split_requests.py +44 -0
- skcomplex/engine/compile/passes/_topology_functions.py +265 -0
- skcomplex/engine/compile/passes/_topology_problem.py +27 -0
- skcomplex/engine/compile/passes/_towards.py +66 -0
- skcomplex/engine/compile/passes/_unpack_matches.py +29 -0
- skcomplex/engine/compile/passes/_unpack_renewals.py +41 -0
- skcomplex/engine/problems/__init__.py +61 -0
- skcomplex/engine/problems/_base.py +150 -0
- skcomplex/engine/problems/_base_problem_spec.py +153 -0
- skcomplex/engine/problems/_block_spec.py +48 -0
- skcomplex/engine/problems/_born_spec.py +24 -0
- skcomplex/engine/problems/_cascade_kernel.py +134 -0
- skcomplex/engine/problems/_collision_kernel.py +147 -0
- skcomplex/engine/problems/_compiled_delay_spec.py +21 -0
- skcomplex/engine/problems/_compiled_request_spec.py +46 -0
- skcomplex/engine/problems/_control_problem_spec.py +90 -0
- skcomplex/engine/problems/_declarations_spec.py +126 -0
- skcomplex/engine/problems/_delayed_state_spec.py +50 -0
- skcomplex/engine/problems/_diffusive_limit_spec.py +50 -0
- skcomplex/engine/problems/_draw_kernel.py +128 -0
- skcomplex/engine/problems/_drive_kernel.py +65 -0
- skcomplex/engine/problems/_dynamics_spec.py +28 -0
- skcomplex/engine/problems/_edge_row_search.py +78 -0
- skcomplex/engine/problems/_edge_search.py +64 -0
- skcomplex/engine/problems/_encounter_kernel.py +200 -0
- skcomplex/engine/problems/_event_kernel.py +70 -0
- skcomplex/engine/problems/_expression_printer.py +410 -0
- skcomplex/engine/problems/_extremal_kernel.py +125 -0
- skcomplex/engine/problems/_field_operator_kernel.py +105 -0
- skcomplex/engine/problems/_finite_volume_kernel.py +423 -0
- skcomplex/engine/problems/_flow_term_spec.py +45 -0
- skcomplex/engine/problems/_frame_spec.py +105 -0
- skcomplex/engine/problems/_jacobian_kernel.py +575 -0
- skcomplex/engine/problems/_kernel_spec.py +130 -0
- skcomplex/engine/problems/_kinetic_problem_spec.py +23 -0
- skcomplex/engine/problems/_law_kernel.py +604 -0
- skcomplex/engine/problems/_learning_problem_spec.py +67 -0
- skcomplex/engine/problems/_linear_term_spec.py +50 -0
- skcomplex/engine/problems/_loop_term_spec.py +44 -0
- skcomplex/engine/problems/_lowered_kernels_spec.py +59 -0
- skcomplex/engine/problems/_markov_kernel.py +68 -0
- skcomplex/engine/problems/_metric_search.py +155 -0
- skcomplex/engine/problems/_monte_carlo_kernel.py +213 -0
- skcomplex/engine/problems/_neighborhood_kernel.py +594 -0
- skcomplex/engine/problems/_noise_term_spec.py +26 -0
- skcomplex/engine/problems/_observed_spec.py +22 -0
- skcomplex/engine/problems/_operator_kernel.py +102 -0
- skcomplex/engine/problems/_operator_lowering.py +323 -0
- skcomplex/engine/problems/_operator_problem_spec.py +138 -0
- skcomplex/engine/problems/_output_spec.py +78 -0
- skcomplex/engine/problems/_pair_search.py +86 -0
- skcomplex/engine/problems/_partials_spec.py +27 -0
- skcomplex/engine/problems/_partition_spec.py +39 -0
- skcomplex/engine/problems/_printed_spec.py +24 -0
- skcomplex/engine/problems/_problem_functions_spec.py +102 -0
- skcomplex/engine/problems/_problem_spec.py +365 -0
- skcomplex/engine/problems/_random_stream.py +49 -0
- skcomplex/engine/problems/_record_spec.py +22 -0
- skcomplex/engine/problems/_recorded_spec.py +21 -0
- skcomplex/engine/problems/_reduction_kernel.py +254 -0
- skcomplex/engine/problems/_reduction_schedule_spec.py +97 -0
- skcomplex/engine/problems/_reference_spec.py +114 -0
- skcomplex/engine/problems/_relation_spec.py +29 -0
- skcomplex/engine/problems/_renewal_kernel.py +250 -0
- skcomplex/engine/problems/_request_spec.py +27 -0
- skcomplex/engine/problems/_rule_kernel.py +227 -0
- skcomplex/engine/problems/_set_symbol_spec.py +28 -0
- skcomplex/engine/problems/_source_loader.py +113 -0
- skcomplex/engine/problems/_static_search.py +42 -0
- skcomplex/engine/problems/_steps.py +39 -0
- skcomplex/engine/problems/_sweep_spec.py +26 -0
- skcomplex/engine/problems/_symmetry_spec.py +29 -0
- skcomplex/engine/problems/_too_dense.py +8 -0
- skcomplex/engine/problems/_topology_kernel.py +589 -0
- skcomplex/engine/problems/_transfer_network.py +4 -0
- skcomplex/engine/problems/_transfer_network_spec.py +50 -0
- skcomplex/engine/problems/_transfer_state_spec.py +68 -0
- skcomplex/engine/runtime/__init__.py +22 -0
- skcomplex/engine/runtime/_as_fast_as_possible.py +17 -0
- skcomplex/engine/runtime/_base.py +137 -0
- skcomplex/engine/runtime/_conservation.py +125 -0
- skcomplex/engine/runtime/_invariants.py +100 -0
- skcomplex/engine/runtime/_real_time.py +55 -0
- skcomplex/engine/runtime/_recorder.py +84 -0
- skcomplex/engine/runtime/_simulations.py +665 -0
- skcomplex/engine/runtime/_trajectories.py +314 -0
- skcomplex/engine/solvers/__init__.py +95 -0
- skcomplex/engine/solvers/_base.py +372 -0
- skcomplex/engine/solvers/_caputo.py +194 -0
- skcomplex/engine/solvers/_collocation.py +334 -0
- skcomplex/engine/solvers/_convolution.py +155 -0
- skcomplex/engine/solvers/_cosimulation.py +400 -0
- skcomplex/engine/solvers/_crank_nicolson.py +32 -0
- skcomplex/engine/solvers/_defaults.py +34 -0
- skcomplex/engine/solvers/_etdrk4.py +86 -0
- skcomplex/engine/solvers/_euler_maruyama.py +161 -0
- skcomplex/engine/solvers/_event_locator.py +249 -0
- skcomplex/engine/solvers/_external.py +94 -0
- skcomplex/engine/solvers/_fractional_abm.py +126 -0
- skcomplex/engine/solvers/_fractional_euler_maruyama.py +322 -0
- skcomplex/engine/solvers/_gillespie.py +135 -0
- skcomplex/engine/solvers/_gradient_descent.py +353 -0
- skcomplex/engine/solvers/_grunwald_letnikov.py +83 -0
- skcomplex/engine/solvers/_heun.py +89 -0
- skcomplex/engine/solvers/_history.py +184 -0
- skcomplex/engine/solvers/_horizon_error.py +10 -0
- skcomplex/engine/solvers/_imex2.py +40 -0
- skcomplex/engine/solvers/_imex_euler.py +35 -0
- skcomplex/engine/solvers/_jump_trajectories.py +98 -0
- skcomplex/engine/solvers/_kinetics.py +242 -0
- skcomplex/engine/solvers/_l1.py +91 -0
- skcomplex/engine/solvers/_lammps.py +745 -0
- skcomplex/engine/solvers/_lammps_fix_spec.py +41 -0
- skcomplex/engine/solvers/_lattice.py +79 -0
- skcomplex/engine/solvers/_lindblad.py +70 -0
- skcomplex/engine/solvers/_maps.py +105 -0
- skcomplex/engine/solvers/_mesa.py +1624 -0
- skcomplex/engine/solvers/_milstein.py +93 -0
- skcomplex/engine/solvers/_monte_carlo.py +43 -0
- skcomplex/engine/solvers/_operator.py +212 -0
- skcomplex/engine/solvers/_optimal_control.py +368 -0
- skcomplex/engine/solvers/_pontryagin.py +298 -0
- skcomplex/engine/solvers/_renewal.py +90 -0
- skcomplex/engine/solvers/_renewals.py +190 -0
- skcomplex/engine/solvers/_rk4.py +263 -0
- skcomplex/engine/solvers/_root.py +176 -0
- skcomplex/engine/solvers/_rows.py +49 -0
- skcomplex/engine/solvers/_scipy_ode.py +602 -0
- skcomplex/engine/solvers/_sde.py +164 -0
- skcomplex/engine/solvers/_semi_lagrangian.py +213 -0
- skcomplex/engine/solvers/_solver.py +159 -0
- skcomplex/engine/solvers/_split.py +394 -0
- skcomplex/engine/solvers/_ssprk.py +147 -0
- skcomplex/engine/solvers/_strang_splitting.py +178 -0
- skcomplex/engine/solvers/_unitary.py +68 -0
- skcomplex/engine/solvers/_velocity_verlet.py +171 -0
- skcomplex/engine/solvers/_yoshida4.py +242 -0
- skcomplex/engine/types.py +90 -0
- skcomplex/engine/viz/__init__.py +35 -0
- skcomplex/engine/viz/_agents.py +223 -0
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- skcomplex/models/physics/statistical_mechanics/_susceptibility.py +112 -0
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- skcomplex/models/social/opinion_dynamics/_hypergraph_consensus.py +106 -0
- skcomplex/models/social/opinion_dynamics/_influencee.py +70 -0
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- skcomplex/models/social/opinion_dynamics/_village.py +61 -0
- skcomplex/models/social/opinion_dynamics/_village_view.py +14 -0
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- skcomplex/models/social/organizations/_arms_race.py +34 -0
- skcomplex/models/social/organizations/_burden.py +38 -0
- skcomplex/models/social/organizations/_city_resident.py +41 -0
- skcomplex/models/social/organizations/_contender_view.py +14 -0
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- skcomplex/models/social/organizations/_daily_movements.py +144 -0
- skcomplex/models/social/organizations/_eater.py +282 -0
- skcomplex/models/social/organizations/_eater_view.py +24 -0
- skcomplex/models/social/organizations/_employee.py +173 -0
- skcomplex/models/social/organizations/_employee_view.py +35 -0
- skcomplex/models/social/organizations/_employment.py +127 -0
- skcomplex/models/social/organizations/_execution.py +79 -0
- skcomplex/models/social/organizations/_gravity_contact.py +69 -0
- skcomplex/models/social/organizations/_hierarchies.py +174 -0
- skcomplex/models/social/organizations/_obesity.py +131 -0
- skcomplex/models/social/organizations/_premises.py +75 -0
- skcomplex/models/social/organizations/_premises_view.py +16 -0
- skcomplex/models/social/organizations/_queues.py +52 -0
- skcomplex/models/social/organizations/_restaurant.py +59 -0
- skcomplex/models/social/organizations/_restaurant_view.py +14 -0
- skcomplex/models/social/organizations/_sabotage.py +183 -0
- skcomplex/models/social/organizations/_supervisor.py +25 -0
- skcomplex/models/social/organizations/_task.py +65 -0
- skcomplex/models/social/organizations/_task_view.py +15 -0
- skcomplex/models/social/organizations/_trafficking.py +184 -0
- skcomplex/models/social/organizations/_traps.py +322 -0
- skcomplex/models/social/organizations/_traveller.py +55 -0
- skcomplex/models/social/organizations/_traveller_view.py +13 -0
- skcomplex/models/social/organizations/_urban_scaling.py +72 -0
- skcomplex/models/social/segregation/__init__.py +21 -0
- skcomplex/models/social/segregation/_block_moves.py +127 -0
- skcomplex/models/social/segregation/_blocks.py +111 -0
- skcomplex/models/social/segregation/_dweller.py +70 -0
- skcomplex/models/social/segregation/_dweller_view.py +16 -0
- skcomplex/models/social/segregation/_relocation.py +60 -0
- skcomplex/models/social/segregation/_resident.py +55 -0
- skcomplex/models/social/segregation/_resident_view.py +13 -0
- skcomplex/models/social/segregation/_schelling.py +75 -0
- skcomplex/models/social/spreading/__init__.py +37 -0
- skcomplex/models/social/spreading/_cascades.py +118 -0
- skcomplex/models/social/spreading/_exposure.py +166 -0
- skcomplex/models/social/spreading/_growing_word.py +55 -0
- skcomplex/models/social/spreading/_growing_word_view.py +13 -0
- skcomplex/models/social/spreading/_growth.py +52 -0
- skcomplex/models/social/spreading/_infective.py +55 -0
- skcomplex/models/social/spreading/_listeners.py +41 -0
- skcomplex/models/social/spreading/_participant.py +50 -0
- skcomplex/models/social/spreading/_rumour_contacts.py +81 -0
- skcomplex/models/social/spreading/_rumours.py +57 -0
- skcomplex/models/social/spreading/_simplicial.py +120 -0
- skcomplex/models/social/spreading/_simplicial_infection.py +64 -0
- skcomplex/models/social/spreading/_threshold_activation.py +50 -0
- skcomplex/models/social/spreading/_threshold_node_view.py +13 -0
- skcomplex/models/social/spreading/_writing.py +86 -0
- skcomplex/models/types.py +10 -0
- skcomplex/specs/__init__.py +198 -0
- skcomplex/specs/_accelerated_spec.py +46 -0
- skcomplex/specs/_agent_snapshot_spec.py +34 -0
- skcomplex/specs/_agent_state_spec.py +26 -0
- skcomplex/specs/_arguments_spec.py +60 -0
- skcomplex/specs/_axis_spec.py +59 -0
- skcomplex/specs/_base_record_spec.py +16 -0
- skcomplex/specs/_base_spec.py +73 -0
- skcomplex/specs/_base_structure_spec.py +173 -0
- skcomplex/specs/_batch_matching_spec.py +23 -0
- skcomplex/specs/_breakpoints_spec.py +58 -0
- skcomplex/specs/_call_spec.py +64 -0
- skcomplex/specs/_capacity_rows_spec.py +120 -0
- skcomplex/specs/_cardinality_spec.py +58 -0
- skcomplex/specs/_cascade_record_spec.py +36 -0
- skcomplex/specs/_clamp_spec.py +54 -0
- skcomplex/specs/_clause_spec.py +42 -0
- skcomplex/specs/_compiled_flow_spec.py +20 -0
- skcomplex/specs/_composed_rule_spec.py +33 -0
- skcomplex/specs/_continuous_matching_spec.py +48 -0
- skcomplex/specs/_control_solution_spec.py +54 -0
- skcomplex/specs/_control_spec.py +21 -0
- skcomplex/specs/_covariance_adaptation_spec.py +25 -0
- skcomplex/specs/_dataset_spec.py +85 -0
- skcomplex/specs/_delay_spec.py +27 -0
- skcomplex/specs/_dialect_spec.py +207 -0
- skcomplex/specs/_differential_evolution_spec.py +33 -0
- skcomplex/specs/_direction_spec.py +44 -0
- skcomplex/specs/_draw_spec.py +273 -0
- skcomplex/specs/_entry_spec.py +403 -0
- skcomplex/specs/_event_record_spec.py +37 -0
- skcomplex/specs/_evolution_strategy_spec.py +25 -0
- skcomplex/specs/_extremal_record_spec.py +32 -0
- skcomplex/specs/_fractional_rows_spec.py +33 -0
- skcomplex/specs/_fractional_state_spec.py +30 -0
- skcomplex/specs/_held_reduction_spec.py +29 -0
- skcomplex/specs/_hilbert_spec.py +75 -0
- skcomplex/specs/_hyperedge_reduction_spec.py +38 -0
- skcomplex/specs/_issue_spec.py +52 -0
- skcomplex/specs/_iterative_matching_spec.py +39 -0
- skcomplex/specs/_jump_channels_spec.py +40 -0
- skcomplex/specs/_jump_path_spec.py +29 -0
- skcomplex/specs/_layer_spec.py +47 -0
- skcomplex/specs/_layout_spec.py +158 -0
- skcomplex/specs/_local_operator_spec.py +72 -0
- skcomplex/specs/_lookup_spec.py +33 -0
- skcomplex/specs/_loop_spec.py +17 -0
- skcomplex/specs/_lowered_functions_spec.py +71 -0
- skcomplex/specs/_match_spec.py +37 -0
- skcomplex/specs/_matrix_law_spec.py +31 -0
- skcomplex/specs/_move_spec.py +69 -0
- skcomplex/specs/_neighbor_read_spec.py +83 -0
- skcomplex/specs/_neighbor_reduction_spec.py +39 -0
- skcomplex/specs/_network_rows_spec.py +124 -0
- skcomplex/specs/_network_snapshot_spec.py +61 -0
- skcomplex/specs/_noise_process_spec.py +41 -0
- skcomplex/specs/_objective_spec.py +39 -0
- skcomplex/specs/_observable_spec.py +79 -0
- skcomplex/specs/_operator_spec.py +170 -0
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- skcomplex/specs/_owners_spec.py +28 -0
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- skcomplex/types.py +140 -0
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"""Take the census of the laws every component of a system declares."""
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# Author: Georgios Douzas <gdouzas@icloud.com>
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BaseLaw,
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CascadeLaw,
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CrossingLaw,
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EquationLaw,
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)
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EDGE_REQUESTS = ('remove-edge', 'rewire')
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59
|
+
SYMMETRY_TOLERANCE = 1e-9
|
|
60
|
+
SYMMETRY_TRIALS = 3
|
|
61
|
+
|
|
62
|
+
|
|
63
|
+
class CensusPass(BasePass):
|
|
64
|
+
"""Pass that takes the census of the laws of the system, keeping going past failing components."""
|
|
65
|
+
|
|
66
|
+
def _get_reads(self) -> tuple[str, ...]:
|
|
67
|
+
"""Return the fields of the compilation the pass reads."""
|
|
68
|
+
return ('nodes',)
|
|
69
|
+
|
|
70
|
+
def _get_writes(self) -> tuple[str, ...]:
|
|
71
|
+
"""Return the fields of the compilation the pass writes."""
|
|
72
|
+
return ('census',)
|
|
73
|
+
|
|
74
|
+
def _run(self, inputs: object = None) -> None:
|
|
75
|
+
"""Take the census of the laws of the nodes."""
|
|
76
|
+
compilation = self.compilation_
|
|
77
|
+
compilation.census = self._census_of(compilation.system, Compilation._required(compilation.nodes, 'nodes'))
|
|
78
|
+
|
|
79
|
+
@staticmethod
|
|
80
|
+
def _state_reads(spec: KernelSpec, value: object) -> frozenset[tuple[str, int]]:
|
|
81
|
+
"""Return the state components that a law value depends on."""
|
|
82
|
+
if not isinstance(value, Expression):
|
|
83
|
+
return frozenset()
|
|
84
|
+
return frozenset(
|
|
85
|
+
(reference.entry.name, reference.column)
|
|
86
|
+
for item in value.variables()
|
|
87
|
+
if (reference := spec.references.get(item)) is not None and reference.is_state
|
|
88
|
+
)
|
|
89
|
+
|
|
90
|
+
@staticmethod
|
|
91
|
+
def _noise_census(
|
|
92
|
+
spec: KernelSpec,
|
|
93
|
+
law: object,
|
|
94
|
+
declarations: DeclarationsSpec,
|
|
95
|
+
) -> tuple[tuple[ProcessKey | None, ...], tuple[tuple[str, int], ...], tuple[frozenset[tuple[str, int]], ...]]:
|
|
96
|
+
"""Return the processes, driven states, and read states of every target component of a noise law."""
|
|
97
|
+
if not isinstance(law, NoiseLaw):
|
|
98
|
+
return (), (), ()
|
|
99
|
+
targets = components_of(law._get_targets()[0])
|
|
100
|
+
values = (
|
|
101
|
+
components_of(law.value)
|
|
102
|
+
if isinstance(law.value, FreeModuleElement | list | tuple)
|
|
103
|
+
else [law.value] * len(targets)
|
|
104
|
+
)
|
|
105
|
+
references = [spec.references.get(item) for item in targets]
|
|
106
|
+
return (
|
|
107
|
+
tuple(NoisePass._process_keys(spec, law, declarations)),
|
|
108
|
+
tuple((item.entry.name, item.column) for item in references if item is not None),
|
|
109
|
+
tuple(CensusPass._state_reads(spec, value) for value in values),
|
|
110
|
+
)
|
|
111
|
+
|
|
112
|
+
@staticmethod
|
|
113
|
+
def _is_vector(entry: EntrySpec, elements: dict[str, BlockSpec]) -> bool:
|
|
114
|
+
"""Check whether the state of a layout entry is declared as a vector of the space's dimension."""
|
|
115
|
+
path, _, name = entry.name.rpartition('.')
|
|
116
|
+
block = elements.get(path)
|
|
117
|
+
if block is None:
|
|
118
|
+
return False
|
|
119
|
+
declaration = declarations_of(block.node.component_type, VariableKind.STATE).get(name)
|
|
120
|
+
return declaration is not None and (declaration.vector or declaration.tensor is not None)
|
|
121
|
+
|
|
122
|
+
@staticmethod
|
|
123
|
+
def _handle_uses(law: BaseLaw, handles: Mapping[Expression, tuple[str, int]]) -> tuple[str, ...]:
|
|
124
|
+
"""Return the Wiener handles that a law uses outside the process of a noise law."""
|
|
125
|
+
if not handles:
|
|
126
|
+
return ()
|
|
127
|
+
symbols = symbols_of(
|
|
128
|
+
[value for value in law._get_values(exclude=('process',)) if isinstance(value, Expression)],
|
|
129
|
+
)
|
|
130
|
+
return tuple(sorted(str(item) for item in symbols if item in handles))
|
|
131
|
+
|
|
132
|
+
@staticmethod
|
|
133
|
+
def _component_kind(node: NodeSpec) -> ElementKind:
|
|
134
|
+
"""Return the kind of the component of a node."""
|
|
135
|
+
if isinstance(node.component, GroupElement) and node.component.variable:
|
|
136
|
+
return ElementKind.VARIABLE_GROUP
|
|
137
|
+
if isinstance(node.component, GroupElement):
|
|
138
|
+
parts = {'sites': ElementKind.SITE_GROUP, 'edges': ElementKind.EDGE_GROUP}
|
|
139
|
+
parts['hyperedges'] = ElementKind.HYPEREDGE_GROUP
|
|
140
|
+
return parts.get(node.component.on or '', ElementKind.GROUP)
|
|
141
|
+
return ElementKind.ELEMENT
|
|
142
|
+
|
|
143
|
+
@staticmethod
|
|
144
|
+
def _equation_targets(spec: KernelSpec, law: BaseLaw) -> tuple[EntrySpec, ...]:
|
|
145
|
+
"""Return the entry of the state an equation names as its target, and none for any other law or target."""
|
|
146
|
+
target = law.target if isinstance(law, EquationLaw) else None
|
|
147
|
+
reference = spec.references.get(target) if isinstance(target, Expression) else None
|
|
148
|
+
return (reference.entry,) if reference is not None and reference.is_state else ()
|
|
149
|
+
|
|
150
|
+
@staticmethod
|
|
151
|
+
def _records_of(
|
|
152
|
+
block: BlockSpec,
|
|
153
|
+
elements: dict[str, BlockSpec],
|
|
154
|
+
observer: Observer,
|
|
155
|
+
declarations: DeclarationsSpec,
|
|
156
|
+
agents: set[str],
|
|
157
|
+
) -> list[CensusRecordSpec]:
|
|
158
|
+
"""Return the census records of the laws of one component."""
|
|
159
|
+
records = []
|
|
160
|
+
specs, _ = SpecsPass._specs_of(block, elements, declarations, observer)
|
|
161
|
+
for spec in specs:
|
|
162
|
+
component = CensusPass._component_of(block.node)
|
|
163
|
+
for law in CensusPass._declared_laws(spec, component):
|
|
164
|
+
items = [item for target in law._get_targets() for item in components_of(target)]
|
|
165
|
+
references = [spec.references.get(item) for item in items if isinstance(item, Expression)]
|
|
166
|
+
targets = tuple(dict.fromkeys(item.entry for item in references if item is not None))
|
|
167
|
+
targets = targets or CensusPass._equation_targets(spec, law)
|
|
168
|
+
owner = CensusPass._law_owner(spec, law, agents)
|
|
169
|
+
vectors = frozenset(entry.name for entry in targets if CensusPass._is_vector(entry, elements))
|
|
170
|
+
kind = CensusPass._component_kind(elements.get(owner, block).node)
|
|
171
|
+
processes, driven, reads = CensusPass._noise_census(spec, law, declarations)
|
|
172
|
+
records.append(
|
|
173
|
+
CensusRecordSpec(
|
|
174
|
+
block.node.path,
|
|
175
|
+
owner,
|
|
176
|
+
law,
|
|
177
|
+
targets,
|
|
178
|
+
vectors,
|
|
179
|
+
kind,
|
|
180
|
+
SpecsPass._group_space(elements.get(owner, block)),
|
|
181
|
+
members=spec.rows,
|
|
182
|
+
handles=CensusPass._handle_uses(law, declarations.handles),
|
|
183
|
+
processes=processes,
|
|
184
|
+
driven=driven,
|
|
185
|
+
reads=reads,
|
|
186
|
+
),
|
|
187
|
+
)
|
|
188
|
+
return records
|
|
189
|
+
|
|
190
|
+
@staticmethod
|
|
191
|
+
def _census_of(system: System, nodes: list[NodeSpec]) -> CensusSpec:
|
|
192
|
+
"""Return the census of the laws of a system, with the errors of the components that fail.
|
|
193
|
+
|
|
194
|
+
The census declares every component and collects its laws as compilation does, without lowering them, and keeps
|
|
195
|
+
going past a failing component, so validation reports every problem at once.
|
|
196
|
+
|
|
197
|
+
Args:
|
|
198
|
+
system:
|
|
199
|
+
The system, with the observables of the run.
|
|
200
|
+
|
|
201
|
+
nodes:
|
|
202
|
+
The nodes of the system.
|
|
203
|
+
|
|
204
|
+
Returns:
|
|
205
|
+
census:
|
|
206
|
+
The census.
|
|
207
|
+
"""
|
|
208
|
+
declarations = DeclarationsSpec(time=symbol('t'))
|
|
209
|
+
errors: list[tuple[str, SkcomplexError]] = []
|
|
210
|
+
blocks = []
|
|
211
|
+
groups = LayoutPass._group_sizes(nodes)
|
|
212
|
+
for node in nodes:
|
|
213
|
+
try:
|
|
214
|
+
declarations, block = LayoutPass._declare_component(declarations, node, groups)
|
|
215
|
+
except SkcomplexError as error:
|
|
216
|
+
errors.append((node.path, error))
|
|
217
|
+
continue
|
|
218
|
+
blocks.append(block)
|
|
219
|
+
elements = {block.node.path: block for block in blocks if not block.node.interaction}
|
|
220
|
+
elements.update(declarations.processes)
|
|
221
|
+
live = ObservableEvaluator._lowerable_observables(system, nodes)
|
|
222
|
+
observer = Observer(declarations, live).check().prepare()
|
|
223
|
+
agents = {block.node.path for block in blocks if block.node.is_agent}
|
|
224
|
+
records = []
|
|
225
|
+
for block in blocks:
|
|
226
|
+
try:
|
|
227
|
+
records += CensusPass._records_of(block, elements, observer, declarations, agents)
|
|
228
|
+
except SkcomplexError as error:
|
|
229
|
+
errors.append((block.node.path, error))
|
|
230
|
+
return CensusSpec(system, records, errors, declarations.agents)
|
|
231
|
+
|
|
232
|
+
@staticmethod
|
|
233
|
+
def _renewal_group(spec: KernelSpec, law: RenewalLaw) -> str:
|
|
234
|
+
"""Return the path of the element or group whose states a renewal law resets, or the law's component."""
|
|
235
|
+
targets = [item for target in (law.reset or {}) for item in components_of(target)]
|
|
236
|
+
reference = spec.references.get(targets[0]) if targets else None
|
|
237
|
+
return spec.owner if reference is None else reference.entry.name.rpartition('.')[0]
|
|
238
|
+
|
|
239
|
+
@staticmethod
|
|
240
|
+
def _special_owner(spec: KernelSpec, law: BaseLaw, agents: set[str]) -> str | None:
|
|
241
|
+
"""Return the owner of a renewal, a rule, a matching, or a topology request, or `None` for another law."""
|
|
242
|
+
if isinstance(law, JumpLaw) and law.waiting is not None:
|
|
243
|
+
return CensusPass._renewal_group(spec, RenewalLaw(law.waiting, law.reset))
|
|
244
|
+
if isinstance(law, RenewalLaw):
|
|
245
|
+
return CensusPass._renewal_group(spec, law)
|
|
246
|
+
if isinstance(law, RuleLaw | MatchLaw):
|
|
247
|
+
paths = [path for value in spec.roles.values() for path in ([value] if isinstance(value, str) else value)]
|
|
248
|
+
return next((path for path in paths if path in agents), next(iter(paths), spec.owner))
|
|
249
|
+
if TopologyKernel._request_of(law) is not None:
|
|
250
|
+
return spec.group or next(iter(spec.groups), spec.owner)
|
|
251
|
+
return None
|
|
252
|
+
|
|
253
|
+
@staticmethod
|
|
254
|
+
def _changed_target(spec: KernelSpec, law: BaseLaw) -> object:
|
|
255
|
+
"""Return the target of a law, or the first state a jump changes."""
|
|
256
|
+
if isinstance(law, JumpLaw):
|
|
257
|
+
return next(iter(law.changes or {}))
|
|
258
|
+
if not law._get_targets():
|
|
259
|
+
error_msg = f'A {type(law).__name__} of {spec.owner} changes no state of its component.'
|
|
260
|
+
raise ValidationError(error_msg)
|
|
261
|
+
return law._get_targets()[0]
|
|
262
|
+
|
|
263
|
+
@staticmethod
|
|
264
|
+
def _law_owner(spec: KernelSpec, law: BaseLaw, agents: set[str]) -> str:
|
|
265
|
+
"""Return the path of the element or group a law belongs to.
|
|
266
|
+
|
|
267
|
+
A renewal belongs to the group whose states it resets, a rule or a matching to the first agent group among its
|
|
268
|
+
roles, a topology request to the group it changes, and a lattice law to the element or group whose sites it
|
|
269
|
+
updates. Flows, Monte Carlo samples, equations, and events belong to their component, and any other law to the
|
|
270
|
+
element or group whose state it changes.
|
|
271
|
+
|
|
272
|
+
Args:
|
|
273
|
+
spec:
|
|
274
|
+
The kernel spec of the law's component.
|
|
275
|
+
|
|
276
|
+
law:
|
|
277
|
+
The law.
|
|
278
|
+
|
|
279
|
+
agents:
|
|
280
|
+
The paths of the agent elements and groups.
|
|
281
|
+
|
|
282
|
+
Returns:
|
|
283
|
+
owner:
|
|
284
|
+
The path of the owner.
|
|
285
|
+
|
|
286
|
+
Raises:
|
|
287
|
+
ValidationError:
|
|
288
|
+
The law changes no state of its component, or targets a symbol that is not a state.
|
|
289
|
+
"""
|
|
290
|
+
owner = CensusPass._special_owner(spec, law, agents)
|
|
291
|
+
if owner is not None:
|
|
292
|
+
return owner
|
|
293
|
+
if isinstance(law, TransferLaw | EquationLaw | CrossingLaw) or (
|
|
294
|
+
isinstance(law, CascadeLaw) and not law._get_targets()
|
|
295
|
+
):
|
|
296
|
+
return spec.owner
|
|
297
|
+
lattice = isinstance(law, CascadeLaw | LocalRuleLaw | ExtremalLaw | SampleLaw)
|
|
298
|
+
target = law._get_targets()[0] if lattice else CensusPass._changed_target(spec, law)
|
|
299
|
+
return spec._target_references(target)[0].entry.name.rpartition('.')[0]
|
|
300
|
+
|
|
301
|
+
@staticmethod
|
|
302
|
+
def _expressions_of(law: BaseLaw) -> list[Expression]:
|
|
303
|
+
"""Return the symbolic components of the targets and the values of a law, and of the laws it holds."""
|
|
304
|
+
found: list[Expression] = []
|
|
305
|
+
for value in (*law._get_targets(), *law._get_values()):
|
|
306
|
+
if isinstance(value, BaseLaw):
|
|
307
|
+
found += CensusPass._expressions_of(value)
|
|
308
|
+
elif isinstance(value, Expression | FreeModuleElement):
|
|
309
|
+
found += [SR(item) for item in components_of(value)]
|
|
310
|
+
return found
|
|
311
|
+
|
|
312
|
+
@staticmethod
|
|
313
|
+
def _outside_reductions(expression: Expression) -> Expression:
|
|
314
|
+
"""Return an expression with every reduction and neighbourhood reduction replaced by one placeholder symbol."""
|
|
315
|
+
calls = [item.call for item in reductions_in(expression)] + [item.call for item in neighborhoods_in(expression)]
|
|
316
|
+
calls += [item.call for item in hyperedges_in(expression)]
|
|
317
|
+
if not calls:
|
|
318
|
+
return expression
|
|
319
|
+
placeholder = symbol('_reduction')
|
|
320
|
+
return SR(expression).subs(dict.fromkeys(calls, placeholder))
|
|
321
|
+
|
|
322
|
+
@staticmethod
|
|
323
|
+
def _end_of(edges: KernelSpec, law: BaseLaw) -> str | None:
|
|
324
|
+
"""Return the end of an edge whose member alone a law reads, or `None` for a law of the edge.
|
|
325
|
+
|
|
326
|
+
A law of one end reads no member of the edge group and, outside its reductions, the symbols of one end only,
|
|
327
|
+
and targets states of that end. Inside its reductions, the other end stands for the other members.
|
|
328
|
+
|
|
329
|
+
Args:
|
|
330
|
+
edges:
|
|
331
|
+
The spec of the edges.
|
|
332
|
+
|
|
333
|
+
law:
|
|
334
|
+
The law.
|
|
335
|
+
|
|
336
|
+
Returns:
|
|
337
|
+
end:
|
|
338
|
+
`'source'`, `'target'`, or `None`.
|
|
339
|
+
"""
|
|
340
|
+
request = TopologyKernel._request_of(law)
|
|
341
|
+
if request is not None and request.kind in EDGE_REQUESTS:
|
|
342
|
+
return None
|
|
343
|
+
if request is None and not all(isinstance(item, Expression | FreeModuleElement) for item in law._get_targets()):
|
|
344
|
+
return None
|
|
345
|
+
expressions = CensusPass._expressions_of(law)
|
|
346
|
+
references = edges.references
|
|
347
|
+
reads = [references.get(item) for item in symbols_of(expressions)]
|
|
348
|
+
if any(reference is not None and reference.source is ReadKind.MEMBER for reference in reads):
|
|
349
|
+
return None
|
|
350
|
+
sides = {ReadKind.FIRST: 'source', ReadKind.SECOND: 'target'}
|
|
351
|
+
outside = symbols_of(CensusPass._outside_reductions(item) for item in expressions)
|
|
352
|
+
ends = {
|
|
353
|
+
sides[reference.source]
|
|
354
|
+
for item in outside
|
|
355
|
+
if (reference := references.get(item)) is not None and reference.source in sides
|
|
356
|
+
}
|
|
357
|
+
if not ends and request is not None:
|
|
358
|
+
return 'source'
|
|
359
|
+
return next(iter(ends)) if len(ends) == 1 else None
|
|
360
|
+
|
|
361
|
+
@staticmethod
|
|
362
|
+
def _substituted_items(
|
|
363
|
+
value: Mapping[object, object] | list[object] | tuple[object, ...] | CallSpec,
|
|
364
|
+
mapping: Mapping[Expression, Expression],
|
|
365
|
+
) -> object:
|
|
366
|
+
"""Return a mapping, a sequence, or a call of a law with the symbols of its items replaced."""
|
|
367
|
+
if isinstance(value, Mapping):
|
|
368
|
+
return {
|
|
369
|
+
CensusPass._substituted(key, mapping): CensusPass._substituted(item, mapping)
|
|
370
|
+
for key, item in value.items()
|
|
371
|
+
}
|
|
372
|
+
if isinstance(value, CallSpec):
|
|
373
|
+
if value.arguments is None:
|
|
374
|
+
return value
|
|
375
|
+
return replace(value, arguments=tuple(CensusPass._substituted(item, mapping) for item in value.arguments))
|
|
376
|
+
return type(value)(CensusPass._substituted(item, mapping) for item in value)
|
|
377
|
+
|
|
378
|
+
@staticmethod
|
|
379
|
+
def _substituted(value: object, mapping: Mapping[Expression, Expression]) -> object:
|
|
380
|
+
"""Return a value of a law with symbols replaced, through vectors, mappings, sequences, calls, and laws."""
|
|
381
|
+
if isinstance(value, BaseLaw):
|
|
382
|
+
parameters = value.get_params(deep=False)
|
|
383
|
+
return BasePass._replaced(
|
|
384
|
+
value,
|
|
385
|
+
**{name: CensusPass._substituted(item, mapping) for name, item in parameters.items()},
|
|
386
|
+
)
|
|
387
|
+
if isinstance(value, FreeModuleElement):
|
|
388
|
+
return vector(SR(item).subs(mapping) for item in value)
|
|
389
|
+
if isinstance(value, Expression):
|
|
390
|
+
return value.subs(mapping)
|
|
391
|
+
if isinstance(value, Mapping | list | tuple | CallSpec):
|
|
392
|
+
return CensusPass._substituted_items(value, mapping)
|
|
393
|
+
return value
|
|
394
|
+
|
|
395
|
+
@staticmethod
|
|
396
|
+
def _end_law(edges: KernelSpec, law: BaseLaw, end: str) -> BaseLaw:
|
|
397
|
+
"""Return a law of one end of an edge written for the member, with the other end standing for other members.
|
|
398
|
+
|
|
399
|
+
Args:
|
|
400
|
+
edges:
|
|
401
|
+
The spec of the edges.
|
|
402
|
+
|
|
403
|
+
law:
|
|
404
|
+
The law, which reads one end outside its reductions.
|
|
405
|
+
|
|
406
|
+
end:
|
|
407
|
+
`'source'` or `'target'`.
|
|
408
|
+
|
|
409
|
+
Returns:
|
|
410
|
+
law:
|
|
411
|
+
The checked law in the symbols of the member and of the other member.
|
|
412
|
+
"""
|
|
413
|
+
own = ReadKind.FIRST if end == 'source' else ReadKind.SECOND
|
|
414
|
+
mapping = {}
|
|
415
|
+
for item, reference in edges.references.items():
|
|
416
|
+
if reference.source in {ReadKind.FIRST, ReadKind.SECOND}:
|
|
417
|
+
member, other = SpecsPass._end_symbols(item)
|
|
418
|
+
mapping[item] = member if reference.source is own else other
|
|
419
|
+
substituted = CensusPass._substituted(law, mapping)
|
|
420
|
+
if not isinstance(substituted, BaseLaw):
|
|
421
|
+
error_msg = f'The law {law!r} of {edges.owner} is not a law once written for the member.'
|
|
422
|
+
raise TypeError(error_msg)
|
|
423
|
+
return substituted.check()
|
|
424
|
+
|
|
425
|
+
@staticmethod
|
|
426
|
+
def _own_end(edges: KernelSpec, law: BaseLaw) -> str | None:
|
|
427
|
+
"""Return the end of an edge whose state a rate law per edge targets, or `None` for another law."""
|
|
428
|
+
if not isinstance(law, RateLaw) or not isinstance(law.value, Expression):
|
|
429
|
+
return None
|
|
430
|
+
target = law._get_targets()[0]
|
|
431
|
+
reference = edges.references.get(target) if isinstance(target, Expression) else None
|
|
432
|
+
if reference is None:
|
|
433
|
+
return None
|
|
434
|
+
return {ReadKind.FIRST: 'source', ReadKind.SECOND: 'target'}.get(reference.source)
|
|
435
|
+
|
|
436
|
+
@staticmethod
|
|
437
|
+
def _ends_of(edges: KernelSpec) -> dict[Expression, tuple[Expression, bool]]:
|
|
438
|
+
"""Return the symbol of the member and whether it is a state, by the symbol of the other member."""
|
|
439
|
+
found = {}
|
|
440
|
+
for item, reference in edges.references.items():
|
|
441
|
+
if reference.source in {ReadKind.FIRST, ReadKind.SECOND}:
|
|
442
|
+
member, other = SpecsPass._end_symbols(item)
|
|
443
|
+
found[other] = (member, reference.is_state)
|
|
444
|
+
return found
|
|
445
|
+
|
|
446
|
+
@staticmethod
|
|
447
|
+
def _difference(edges: KernelSpec, value: Expression) -> tuple[Expression, Expression] | None:
|
|
448
|
+
"""Return the coefficient and the state of a rate that is a constant times the difference of the ends.
|
|
449
|
+
|
|
450
|
+
The coefficient reads no state and nothing of the other member.
|
|
451
|
+
|
|
452
|
+
Args:
|
|
453
|
+
edges:
|
|
454
|
+
The spec of the edges.
|
|
455
|
+
|
|
456
|
+
value:
|
|
457
|
+
The rate of the member, in the symbols of the member and of the other member.
|
|
458
|
+
|
|
459
|
+
Returns:
|
|
460
|
+
difference:
|
|
461
|
+
The coefficient and the symbol of the state of the member, or `None`.
|
|
462
|
+
"""
|
|
463
|
+
ends = CensusPass._ends_of(edges)
|
|
464
|
+
states = {member for member, is_state in ends.values() if is_state}
|
|
465
|
+
found = [item for item in value.variables() if item in ends]
|
|
466
|
+
if len(found) != 1 or not ends[found[0]][1]:
|
|
467
|
+
return None
|
|
468
|
+
other, member = found[0], ends[found[0]][0]
|
|
469
|
+
coefficient = SR(value.diff(other))
|
|
470
|
+
if any(item in ends or item in states for item in coefficient.variables()):
|
|
471
|
+
return None
|
|
472
|
+
if not SR(value - coefficient * (other - member)).expand().is_zero():
|
|
473
|
+
return None
|
|
474
|
+
return coefficient, member
|
|
475
|
+
|
|
476
|
+
@staticmethod
|
|
477
|
+
def _squared_spacing(place: FieldElement) -> float | None:
|
|
478
|
+
"""Return the factor that turns the Laplacian of a field into the sum of the differences over its neighbours.
|
|
479
|
+
|
|
480
|
+
It is the squared spacing of a lattice with one spacing, `None` for a lattice with several, and 1 elsewhere.
|
|
481
|
+
"""
|
|
482
|
+
space = place.space
|
|
483
|
+
if not isinstance(space, LatticeSpace):
|
|
484
|
+
return 1.0
|
|
485
|
+
spacings = set(space.check().prepare().spacings_)
|
|
486
|
+
return spacings.pop() ** 2 if len(spacings) == 1 else None
|
|
487
|
+
|
|
488
|
+
@staticmethod
|
|
489
|
+
def _shifted_law(edges: KernelSpec, law: RateLaw, end: str, space: LatticeSpace) -> RateLaw:
|
|
490
|
+
"""Return a rate per edge of a lattice field as a sum over the axes of shifted reads of the other end.
|
|
491
|
+
|
|
492
|
+
The target of an edge is one site ahead of its source along an axis, so the other end of a rate of the target
|
|
493
|
+
is one site behind, and that of a rate of the source one site ahead.
|
|
494
|
+
|
|
495
|
+
Args:
|
|
496
|
+
edges:
|
|
497
|
+
The spec of the edges.
|
|
498
|
+
|
|
499
|
+
law:
|
|
500
|
+
The rate in the symbols of the member and of the other member.
|
|
501
|
+
|
|
502
|
+
end:
|
|
503
|
+
`'source'` or `'target'`, the end the rate belongs to.
|
|
504
|
+
|
|
505
|
+
space:
|
|
506
|
+
The lattice.
|
|
507
|
+
|
|
508
|
+
Returns:
|
|
509
|
+
law:
|
|
510
|
+
The rate of the member.
|
|
511
|
+
"""
|
|
512
|
+
value = SR(law.value)
|
|
513
|
+
ends = {
|
|
514
|
+
other: member for other, (member, _) in CensusPass._ends_of(edges).items() if other in value.variables()
|
|
515
|
+
}
|
|
516
|
+
sign = 1 if end == 'source' else -1
|
|
517
|
+
dimensions = space.check().prepare().n_dim_
|
|
518
|
+
total = SR(0)
|
|
519
|
+
for axis, step in enumerate(space.spacings_):
|
|
520
|
+
offset = [sign * step if index == axis else 0 for index in range(dimensions)]
|
|
521
|
+
total += value.subs({other: shifted(member, offset) for other, member in ends.items()})
|
|
522
|
+
return BasePass._replaced(law, value=total).check()
|
|
523
|
+
|
|
524
|
+
@staticmethod
|
|
525
|
+
def _field_laws(edges: KernelSpec, laws: list[BaseLaw]) -> tuple[list[BaseLaw], list[BaseLaw]]:
|
|
526
|
+
"""Return the rates per edge of a field lowered to laws of the member, and the laws that stay per edge.
|
|
527
|
+
|
|
528
|
+
Two rates of both ends that are the same constant times the difference of the ends lower to the field's
|
|
529
|
+
Laplacian times its squared spacing. Other rates on a lattice lower to whole-site shifted reads.
|
|
530
|
+
|
|
531
|
+
Args:
|
|
532
|
+
edges:
|
|
533
|
+
The spec of the edges, whose `place` is the field.
|
|
534
|
+
|
|
535
|
+
laws:
|
|
536
|
+
The laws per edge.
|
|
537
|
+
|
|
538
|
+
Returns:
|
|
539
|
+
laws:
|
|
540
|
+
The laws of the member, and the laws that stay per edge.
|
|
541
|
+
"""
|
|
542
|
+
place = edges.place
|
|
543
|
+
if place is None:
|
|
544
|
+
return [], laws
|
|
545
|
+
written: dict[int, tuple[str, RateLaw]] = {}
|
|
546
|
+
for index, law in enumerate(laws):
|
|
547
|
+
end = CensusPass._own_end(edges, law)
|
|
548
|
+
item = CensusPass._end_law(edges, law, end) if end is not None else None
|
|
549
|
+
if end is not None and isinstance(item, RateLaw):
|
|
550
|
+
written[index] = (end, item)
|
|
551
|
+
scale = CensusPass._squared_spacing(place)
|
|
552
|
+
lowered: list[BaseLaw] = []
|
|
553
|
+
taken: set[int] = set()
|
|
554
|
+
for index, (end, law) in written.items():
|
|
555
|
+
partner = next(
|
|
556
|
+
(
|
|
557
|
+
other
|
|
558
|
+
for other, (side, item) in written.items()
|
|
559
|
+
if other not in taken
|
|
560
|
+
and side != end
|
|
561
|
+
and str(item._get_targets()[0]) == str(law._get_targets()[0])
|
|
562
|
+
and SR(SR(item.value) - SR(law.value)).is_zero()
|
|
563
|
+
),
|
|
564
|
+
None,
|
|
565
|
+
)
|
|
566
|
+
difference = CensusPass._difference(edges, SR(law.value))
|
|
567
|
+
if index in taken or partner is None or difference is None or scale is None:
|
|
568
|
+
continue
|
|
569
|
+
coefficient, member = difference
|
|
570
|
+
lowered.append(BasePass._replaced(law, value=coefficient * scale * laplacian(member)).check())
|
|
571
|
+
taken |= {index, partner}
|
|
572
|
+
if isinstance(place.space, LatticeSpace):
|
|
573
|
+
lowered += [
|
|
574
|
+
CensusPass._shifted_law(edges, law, end, place.space)
|
|
575
|
+
for index, (end, law) in written.items()
|
|
576
|
+
if index not in taken
|
|
577
|
+
]
|
|
578
|
+
taken |= set(written)
|
|
579
|
+
return lowered, [law for index, law in enumerate(laws) if index not in taken]
|
|
580
|
+
|
|
581
|
+
@staticmethod
|
|
582
|
+
def _targets_second(spec: KernelSpec, law: BaseLaw) -> bool:
|
|
583
|
+
"""Check whether a law of a hyperedge interaction targets the member of its group on hyperedges or edges."""
|
|
584
|
+
path = spec.roles.get('hyperedge', spec.roles.get('edge'))
|
|
585
|
+
targets = [item for item in law._get_targets() if isinstance(item, Expression | FreeModuleElement)]
|
|
586
|
+
return any(
|
|
587
|
+
reference.entry.name.rpartition('.')[0] == path
|
|
588
|
+
for target in targets
|
|
589
|
+
for reference in spec._target_references(target)
|
|
590
|
+
)
|
|
591
|
+
|
|
592
|
+
@staticmethod
|
|
593
|
+
def _hyperedge_laws(spec: KernelSpec, laws: list[BaseLaw]) -> list[BaseLaw]:
|
|
594
|
+
"""Return the laws of one kind of a hyperedge interaction, with their reductions over the members written out.
|
|
595
|
+
|
|
596
|
+
The spec of the focal member keeps the laws of the nodes, and the spec of the hyperedge the laws that target
|
|
597
|
+
the member of the group on hyperedges or edges.
|
|
598
|
+
|
|
599
|
+
Args:
|
|
600
|
+
spec:
|
|
601
|
+
The spec of the hyperedge interaction for one kind of laws and one size.
|
|
602
|
+
|
|
603
|
+
laws:
|
|
604
|
+
The declared laws.
|
|
605
|
+
|
|
606
|
+
Returns:
|
|
607
|
+
laws:
|
|
608
|
+
The laws of the spec, checked.
|
|
609
|
+
|
|
610
|
+
Raises:
|
|
611
|
+
TypeError:
|
|
612
|
+
A law is no longer a law once its reductions are written out.
|
|
613
|
+
"""
|
|
614
|
+
kept = []
|
|
615
|
+
for law in laws:
|
|
616
|
+
if CensusPass._targets_second(spec, law) != (spec.hyperedge == HYPEREDGE_LAWS):
|
|
617
|
+
continue
|
|
618
|
+
expansions = HyperedgeTables._expansions(spec, CensusPass._expressions_of(law))
|
|
619
|
+
expanded = CensusPass._substituted(law, expansions) if expansions else law
|
|
620
|
+
if not isinstance(expanded, BaseLaw):
|
|
621
|
+
error_msg = f'The law {law!r} of {spec.owner} is not a law once its reductions are written out.'
|
|
622
|
+
raise TypeError(error_msg)
|
|
623
|
+
kept.append(HyperedgeTables._masked(spec, expanded.check()))
|
|
624
|
+
return kept
|
|
625
|
+
|
|
626
|
+
@staticmethod
|
|
627
|
+
def _opaque_calls(expression: Expression) -> dict[Expression, Expression]:
|
|
628
|
+
"""Return a symbol for every outermost call of a symbolic function, which has no value at numbers."""
|
|
629
|
+
if isinstance(expression.operator(), SymbolicFunction):
|
|
630
|
+
return {expression: SR.symbol(f'_call_{abs(hash(str(expression)))}')}
|
|
631
|
+
found: dict[Expression, Expression] = {}
|
|
632
|
+
for operand in expression.operands():
|
|
633
|
+
found.update(CensusPass._opaque_calls(operand))
|
|
634
|
+
return found
|
|
635
|
+
|
|
636
|
+
@staticmethod
|
|
637
|
+
def _breaks_symmetry(residual: Expression) -> bool:
|
|
638
|
+
"""Check whether an expression that a symmetry needs to be 0 is not 0 at random values of its symbols."""
|
|
639
|
+
opaque = residual.subs(CensusPass._opaque_calls(residual))
|
|
640
|
+
symbols = opaque.variables()
|
|
641
|
+
generator = np.random.default_rng(len(symbols))
|
|
642
|
+
for _ in range(SYMMETRY_TRIALS):
|
|
643
|
+
values = dict(zip(symbols, generator.uniform(0.1, 1.0, len(symbols)).tolist(), strict=True))
|
|
644
|
+
value = opaque.subs(values)
|
|
645
|
+
if not value.is_numeric() or abs(complex(value)) > SYMMETRY_TOLERANCE:
|
|
646
|
+
return bool(value.is_numeric())
|
|
647
|
+
return False
|
|
648
|
+
|
|
649
|
+
@staticmethod
|
|
650
|
+
def _check_tensor_rate(law: RateLaw, name: str, tensor: TensorSpec, value: Matrix) -> None:
|
|
651
|
+
"""Raise an error for a matrix rate whose dependent entries are not the ones its independent entries give."""
|
|
652
|
+
expected = tensor.matrix_of(value[row, column] for row, column in tensor.indices)
|
|
653
|
+
size = tensor.n_dim
|
|
654
|
+
for row in range(size):
|
|
655
|
+
for column in range(size):
|
|
656
|
+
residual = distribute_operators(SR(value[row, column] - expected[row, column])).expand()
|
|
657
|
+
if residual.is_zero() or residual.simplify_full().is_zero():
|
|
658
|
+
continue
|
|
659
|
+
if not CensusPass._breaks_symmetry(residual):
|
|
660
|
+
continue
|
|
661
|
+
last = row == column == size - 1 and tensor.symmetry == 'traceless'
|
|
662
|
+
where = f'the trace {value.trace()}' if last else f'the entry [{row}, {column}]'
|
|
663
|
+
error_msg = (
|
|
664
|
+
f'The rate law {law.label or repr(law.value)} on the tensor state {name} breaks its symmetry '
|
|
665
|
+
f'{tensor.symmetry!r} at {where}, by the comparison at random component values, since Sage does '
|
|
666
|
+
'not simplify the difference to 0.'
|
|
667
|
+
)
|
|
668
|
+
raise TensorSymmetryError(error_msg)
|
|
669
|
+
|
|
670
|
+
@staticmethod
|
|
671
|
+
def _component_rates(spec: KernelSpec, law: BaseLaw) -> list[BaseLaw]:
|
|
672
|
+
"""Return a rate law on a tensor state, or a field operator rate on a vector, as one rate per component.
|
|
673
|
+
|
|
674
|
+
Args:
|
|
675
|
+
spec:
|
|
676
|
+
The kernel spec of the component.
|
|
677
|
+
|
|
678
|
+
law:
|
|
679
|
+
The law as the component returns it.
|
|
680
|
+
|
|
681
|
+
Returns:
|
|
682
|
+
laws:
|
|
683
|
+
The rate of every independent component, or any other law as it is.
|
|
684
|
+
|
|
685
|
+
Raises:
|
|
686
|
+
TensorShapeError:
|
|
687
|
+
The target is not the matrix of a tensor state, or the rate does not have its shape.
|
|
688
|
+
|
|
689
|
+
TensorSymmetryError:
|
|
690
|
+
The rate breaks the symmetry of the state.
|
|
691
|
+
"""
|
|
692
|
+
if not isinstance(law, RateLaw):
|
|
693
|
+
return [law]
|
|
694
|
+
if isinstance(law.target, FreeModuleElement) and isinstance(law.value, FreeModuleElement):
|
|
695
|
+
if not any(FieldLowering._has_operators(item) for item in law.value):
|
|
696
|
+
return [law]
|
|
697
|
+
pairs = zip(law.target, law.value, strict=True)
|
|
698
|
+
return [RateLaw(target, rate, law.order, label=law.label) for target, rate in pairs]
|
|
699
|
+
if not isinstance(law.target, Matrix):
|
|
700
|
+
return [law]
|
|
701
|
+
references = [spec.references.get(item) for item in law.target.variables()]
|
|
702
|
+
entry = next((item.entry for item in references if item is not None and item.entry.tensor is not None), None)
|
|
703
|
+
if entry is None or entry.tensor is None:
|
|
704
|
+
error_msg = f'A rate law of {spec.owner} targets the matrix {law.target}, which is no tensor state.'
|
|
705
|
+
raise TensorShapeError(error_msg)
|
|
706
|
+
tensor = entry.tensor
|
|
707
|
+
targets = [law.target[row, column] for row, column in tensor.indices]
|
|
708
|
+
if BaseLaw._is_function(law.value):
|
|
709
|
+
return [RateLaw(vector(targets), law.value, law.order, label=law.label)]
|
|
710
|
+
if not isinstance(law.value, Matrix) or law.value.dimensions() != law.target.dimensions():
|
|
711
|
+
error_msg = (
|
|
712
|
+
f'A rate law of {spec.owner} on the tensor state {entry.name} has the value {law.value}. Give a matrix '
|
|
713
|
+
f'of {tensor.n_dim} rows and {tensor.n_dim} columns.'
|
|
714
|
+
)
|
|
715
|
+
raise TensorShapeError(error_msg)
|
|
716
|
+
CensusPass._check_tensor_rate(law, entry.name, tensor, law.value)
|
|
717
|
+
rates = [law.value[row, column] for row, column in tensor.indices]
|
|
718
|
+
return [RateLaw(target, rate, law.order, label=law.label) for target, rate in zip(targets, rates, strict=True)]
|
|
719
|
+
|
|
720
|
+
@staticmethod
|
|
721
|
+
def _declared_laws(spec: KernelSpec, component: BasePart) -> list[BaseLaw]:
|
|
722
|
+
"""Return the laws a component returns for its namespace, after checking their classes against its binding.
|
|
723
|
+
|
|
724
|
+
Args:
|
|
725
|
+
spec:
|
|
726
|
+
The kernel spec of the component.
|
|
727
|
+
|
|
728
|
+
component:
|
|
729
|
+
The object whose `laws` method describes the component.
|
|
730
|
+
|
|
731
|
+
Returns:
|
|
732
|
+
laws:
|
|
733
|
+
The laws as declared.
|
|
734
|
+
|
|
735
|
+
Raises:
|
|
736
|
+
ValidationError:
|
|
737
|
+
`laws` returns something other than declarable laws, or laws its binding does not take.
|
|
738
|
+
"""
|
|
739
|
+
returned = component.prepare().run(spec.namespace).laws_
|
|
740
|
+
laws = [law for law in returned if isinstance(law, BaseLaw)]
|
|
741
|
+
if not isinstance(returned, list | tuple) or len(laws) < len(returned):
|
|
742
|
+
error_msg = f'`_get_laws` of {spec.owner} must return a list of laws.'
|
|
743
|
+
raise ValidationError(error_msg)
|
|
744
|
+
split = [item for law in laws for item in CensusPass._component_rates(spec, law)]
|
|
745
|
+
declared = [law.check().prepare(spec.owner) for law in split]
|
|
746
|
+
if spec.hyperedge is not None:
|
|
747
|
+
declared = CensusPass._hyperedge_laws(spec, declared)
|
|
748
|
+
searched = spec.pairs is not None and spec.edges is None
|
|
749
|
+
alone = spec.edges is not None and spec.edges.pairs is None
|
|
750
|
+
rules = [law for law in declared if (searched or alone) and isinstance(law, RuleLaw)]
|
|
751
|
+
declared = [law for law in declared if law not in rules]
|
|
752
|
+
if isinstance(spec.pairs, PairSearch) and not all(isinstance(law, RateLaw) for law in declared):
|
|
753
|
+
error_msg = (
|
|
754
|
+
f'Pair interaction {spec.owner} returns laws other than Rate, which pair interactions do not take.'
|
|
755
|
+
)
|
|
756
|
+
raise ValidationError(error_msg)
|
|
757
|
+
if isinstance(spec.pairs, EdgeSearch):
|
|
758
|
+
declared = CensusPass._field_laws(spec, [law for law in declared if CensusPass._end_of(spec, law) is None])[
|
|
759
|
+
1
|
|
760
|
+
]
|
|
761
|
+
if spec.edges is not None:
|
|
762
|
+
edges = spec.edges
|
|
763
|
+
lowered, kept = CensusPass._field_laws(
|
|
764
|
+
edges,
|
|
765
|
+
[law for law in declared if CensusPass._end_of(edges, law) is None],
|
|
766
|
+
)
|
|
767
|
+
if edges.pairs is None and kept:
|
|
768
|
+
error_msg = (
|
|
769
|
+
f'Interaction {spec.owner} over neighbours has laws per edge, but its members live on a space '
|
|
770
|
+
'without edges. Give the group a lattice or network space, write laws of one end, or on a field '
|
|
771
|
+
'write a constant times the difference of the ends.'
|
|
772
|
+
)
|
|
773
|
+
raise ValidationError(error_msg)
|
|
774
|
+
declared = [
|
|
775
|
+
*(
|
|
776
|
+
CensusPass._end_law(edges, law, end)
|
|
777
|
+
for law in declared
|
|
778
|
+
if (end := CensusPass._end_of(edges, law)) is not None
|
|
779
|
+
),
|
|
780
|
+
*lowered,
|
|
781
|
+
]
|
|
782
|
+
edge_kinds = (RateLaw, NoiseLaw, JumpLaw, UpdateLaw, BoundaryLaw)
|
|
783
|
+
if isinstance(spec.pairs, EdgeSearch) and not all(isinstance(law, edge_kinds) for law in declared):
|
|
784
|
+
error_msg = (
|
|
785
|
+
f'Interaction {spec.owner} over neighbours returns laws other than Rate, Noise, Jump, Update, or '
|
|
786
|
+
'Boundary laws for its edges. Its edges take these laws, and the laws that read one end of an edge '
|
|
787
|
+
'run once per member.'
|
|
788
|
+
)
|
|
789
|
+
raise ValidationError(error_msg)
|
|
790
|
+
checked = []
|
|
791
|
+
for law in declared:
|
|
792
|
+
try:
|
|
793
|
+
checked.append(law.prepare(spec.owner))
|
|
794
|
+
except ValidationError as error:
|
|
795
|
+
error_msg = f'{type(law).__name__} of {spec.owner}: {error}'
|
|
796
|
+
raise ValidationError(error_msg) from error
|
|
797
|
+
return [*rules, *checked]
|
|
798
|
+
|
|
799
|
+
@staticmethod
|
|
800
|
+
def _component_of(node: NodeSpec) -> BasePart:
|
|
801
|
+
"""Return the part whose laws describe a node, a representative member for a group."""
|
|
802
|
+
if isinstance(node.component, GroupElement):
|
|
803
|
+
group = node.component
|
|
804
|
+
return group.element(group.label).set_params(**(group.values or {})).check()
|
|
805
|
+
if not isinstance(node.component, BasePart):
|
|
806
|
+
error_msg = f'The node {node.path} holds a {type(node.component).__name__}, which declares no laws.'
|
|
807
|
+
raise TypeError(error_msg)
|
|
808
|
+
return node.component
|