scikit-complexity 0.2.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scikit_complexity-0.2.0.dist-info/METADATA +317 -0
- scikit_complexity-0.2.0.dist-info/RECORD +1748 -0
- scikit_complexity-0.2.0.dist-info/WHEEL +4 -0
- scikit_complexity-0.2.0.dist-info/entry_points.txt +4 -0
- scikit_complexity-0.2.0.dist-info/licenses/LICENSE +21 -0
- skcomplex/__init__.py +1 -0
- skcomplex/analysis/__init__.py +101 -0
- skcomplex/analysis/_alignment.py +263 -0
- skcomplex/analysis/_automata.py +658 -0
- skcomplex/analysis/_base.py +841 -0
- skcomplex/analysis/_clusters.py +298 -0
- skcomplex/analysis/_coarse_grain.py +183 -0
- skcomplex/analysis/_collapse.py +318 -0
- skcomplex/analysis/_complexity.py +129 -0
- skcomplex/analysis/_computational_mechanics.py +220 -0
- skcomplex/analysis/_correlation.py +364 -0
- skcomplex/analysis/_defects.py +111 -0
- skcomplex/analysis/_discovery.py +101 -0
- skcomplex/analysis/_displacement.py +135 -0
- skcomplex/analysis/_distribution.py +327 -0
- skcomplex/analysis/_domains.py +220 -0
- skcomplex/analysis/_embedding.py +235 -0
- skcomplex/analysis/_emergence.py +503 -0
- skcomplex/analysis/_entropy.py +425 -0
- skcomplex/analysis/_ergodicity.py +228 -0
- skcomplex/analysis/_events.py +301 -0
- skcomplex/analysis/_fit.py +368 -0
- skcomplex/analysis/_groups.py +205 -0
- skcomplex/analysis/_information.py +488 -0
- skcomplex/analysis/_invariants.py +409 -0
- skcomplex/analysis/_irreversibility.py +421 -0
- skcomplex/analysis/_kramers_moyal.py +104 -0
- skcomplex/analysis/_large_deviations.py +378 -0
- skcomplex/analysis/_linearization.py +231 -0
- skcomplex/analysis/_local_information.py +166 -0
- skcomplex/analysis/_loops.py +394 -0
- skcomplex/analysis/_lyapunov.py +342 -0
- skcomplex/analysis/_markov.py +303 -0
- skcomplex/analysis/_mode_decomposition.py +209 -0
- skcomplex/analysis/_motifs.py +239 -0
- skcomplex/analysis/_neighbors.py +303 -0
- skcomplex/analysis/_networks.py +286 -0
- skcomplex/analysis/_operator.py +312 -0
- skcomplex/analysis/_partial_information.py +118 -0
- skcomplex/analysis/_passage.py +244 -0
- skcomplex/analysis/_recurrence.py +202 -0
- skcomplex/analysis/_reservoirs.py +387 -0
- skcomplex/analysis/_rolling.py +168 -0
- skcomplex/analysis/_scaling.py +370 -0
- skcomplex/analysis/_sections.py +225 -0
- skcomplex/analysis/_signatures.py +250 -0
- skcomplex/analysis/_sparse_identification.py +398 -0
- skcomplex/analysis/_spectrum.py +164 -0
- skcomplex/analysis/_stability.py +547 -0
- skcomplex/analysis/_surrogates.py +127 -0
- skcomplex/analysis/_symbolic.py +639 -0
- skcomplex/analysis/types.py +43 -0
- skcomplex/base.py +159 -0
- skcomplex/core/__init__.py +1 -0
- skcomplex/core/base.py +150 -0
- skcomplex/core/elements/__init__.py +21 -0
- skcomplex/core/elements/_base.py +84 -0
- skcomplex/core/elements/_compartment.py +52 -0
- skcomplex/core/elements/_density.py +52 -0
- skcomplex/core/elements/_element.py +80 -0
- skcomplex/core/elements/_field.py +192 -0
- skcomplex/core/elements/_group.py +241 -0
- skcomplex/core/elements/_lattice.py +115 -0
- skcomplex/core/elements/_point.py +66 -0
- skcomplex/core/interactions/__init__.py +89 -0
- skcomplex/core/interactions/_advection.py +134 -0
- skcomplex/core/interactions/_base.py +361 -0
- skcomplex/core/interactions/_cascade.py +195 -0
- skcomplex/core/interactions/_choice.py +320 -0
- skcomplex/core/interactions/_conservation.py +164 -0
- skcomplex/core/interactions/_coupling.py +741 -0
- skcomplex/core/interactions/_crossing.py +136 -0
- skcomplex/core/interactions/_diffusion.py +99 -0
- skcomplex/core/interactions/_encounter.py +201 -0
- skcomplex/core/interactions/_euler_lagrange.py +183 -0
- skcomplex/core/interactions/_evolution.py +520 -0
- skcomplex/core/interactions/_feedback.py +79 -0
- skcomplex/core/interactions/_gradient.py +293 -0
- skcomplex/core/interactions/_grouping.py +399 -0
- skcomplex/core/interactions/_hamiltonian.py +191 -0
- skcomplex/core/interactions/_hyperedge.py +96 -0
- skcomplex/core/interactions/_imitation.py +357 -0
- skcomplex/core/interactions/_impulse.py +133 -0
- skcomplex/core/interactions/_interaction.py +58 -0
- skcomplex/core/interactions/_jump.py +201 -0
- skcomplex/core/interactions/_life_cycle.py +424 -0
- skcomplex/core/interactions/_local_rule.py +134 -0
- skcomplex/core/interactions/_map.py +239 -0
- skcomplex/core/interactions/_matching.py +701 -0
- skcomplex/core/interactions/_movement.py +377 -0
- skcomplex/core/interactions/_neighbor.py +88 -0
- skcomplex/core/interactions/_optimization.py +206 -0
- skcomplex/core/interactions/_pair.py +82 -0
- skcomplex/core/interactions/_pair_coupling.py +169 -0
- skcomplex/core/interactions/_rate.py +240 -0
- skcomplex/core/interactions/_reaction.py +466 -0
- skcomplex/core/interactions/_reinforcement.py +226 -0
- skcomplex/core/interactions/_relaxation.py +103 -0
- skcomplex/core/interactions/_sampling.py +177 -0
- skcomplex/core/interactions/_satisfiability.py +145 -0
- skcomplex/core/interactions/_sign_adjustment.py +222 -0
- skcomplex/core/interactions/_topology.py +215 -0
- skcomplex/core/interactions/_training.py +184 -0
- skcomplex/core/interactions/_transfer.py +669 -0
- skcomplex/core/interactions/_transition.py +427 -0
- skcomplex/core/laws/__init__.py +60 -0
- skcomplex/core/laws/_base.py +194 -0
- skcomplex/core/laws/_bilinear.py +91 -0
- skcomplex/core/laws/_boundary.py +59 -0
- skcomplex/core/laws/_cascade.py +79 -0
- skcomplex/core/laws/_crossing.py +87 -0
- skcomplex/core/laws/_dissipator.py +79 -0
- skcomplex/core/laws/_drive.py +56 -0
- skcomplex/core/laws/_emission.py +81 -0
- skcomplex/core/laws/_encounter.py +96 -0
- skcomplex/core/laws/_equation.py +105 -0
- skcomplex/core/laws/_extremal.py +94 -0
- skcomplex/core/laws/_flux.py +108 -0
- skcomplex/core/laws/_fractional_noise.py +65 -0
- skcomplex/core/laws/_generator.py +66 -0
- skcomplex/core/laws/_gradient_step.py +89 -0
- skcomplex/core/laws/_jump.py +137 -0
- skcomplex/core/laws/_local_rule.py +92 -0
- skcomplex/core/laws/_match.py +321 -0
- skcomplex/core/laws/_noise.py +125 -0
- skcomplex/core/laws/_rate.py +82 -0
- skcomplex/core/laws/_rule.py +82 -0
- skcomplex/core/laws/_sample.py +65 -0
- skcomplex/core/laws/_transfer.py +165 -0
- skcomplex/core/laws/_transition.py +77 -0
- skcomplex/core/laws/_update.py +121 -0
- skcomplex/core/laws/utils/__init__.py +142 -0
- skcomplex/core/laws/utils/_agents.py +127 -0
- skcomplex/core/laws/utils/_components.py +63 -0
- skcomplex/core/laws/utils/_conditions.py +198 -0
- skcomplex/core/laws/utils/_contractions.py +74 -0
- skcomplex/core/laws/utils/_delays.py +170 -0
- skcomplex/core/laws/utils/_history.py +167 -0
- skcomplex/core/laws/utils/_local_operators.py +68 -0
- skcomplex/core/laws/utils/_lookups.py +40 -0
- skcomplex/core/laws/utils/_moments.py +122 -0
- skcomplex/core/laws/utils/_operators.py +237 -0
- skcomplex/core/laws/utils/_phase.py +126 -0
- skcomplex/core/laws/utils/_pointwise.py +160 -0
- skcomplex/core/laws/utils/_reductions.py +942 -0
- skcomplex/core/laws/utils/_signals.py +214 -0
- skcomplex/core/laws/utils/_tables.py +4 -0
- skcomplex/core/laws/utils/_tensors.py +235 -0
- skcomplex/core/spaces/__init__.py +52 -0
- skcomplex/core/spaces/_adjacency.py +34 -0
- skcomplex/core/spaces/_base.py +218 -0
- skcomplex/core/spaces/_box.py +41 -0
- skcomplex/core/spaces/_cayley.py +352 -0
- skcomplex/core/spaces/_cone.py +65 -0
- skcomplex/core/spaces/_continuous.py +93 -0
- skcomplex/core/spaces/_continuous_time.py +27 -0
- skcomplex/core/spaces/_discrete_time.py +53 -0
- skcomplex/core/spaces/_generator.py +51 -0
- skcomplex/core/spaces/_lattice.py +194 -0
- skcomplex/core/spaces/_lattice_neighborhood.py +50 -0
- skcomplex/core/spaces/_memory.py +45 -0
- skcomplex/core/spaces/_mesh.py +71 -0
- skcomplex/core/spaces/_moore.py +49 -0
- skcomplex/core/spaces/_nearest.py +41 -0
- skcomplex/core/spaces/_network.py +256 -0
- skcomplex/core/spaces/_phase.py +136 -0
- skcomplex/core/spaces/_radius.py +40 -0
- skcomplex/core/spaces/_static_time.py +34 -0
- skcomplex/core/spaces/_triangular.py +37 -0
- skcomplex/core/spaces/_von_neumann.py +51 -0
- skcomplex/core/specs/__init__.py +25 -0
- skcomplex/core/specs/_census_record_spec.py +72 -0
- skcomplex/core/specs/_census_spec.py +40 -0
- skcomplex/core/specs/_compiled_agents_spec.py +62 -0
- skcomplex/core/specs/_compiled_element_spec.py +59 -0
- skcomplex/core/specs/_compiled_interaction_spec.py +33 -0
- skcomplex/core/specs/_lattice_context_spec.py +40 -0
- skcomplex/core/specs/_lattice_state_spec.py +49 -0
- skcomplex/core/specs/_node_spec.py +64 -0
- skcomplex/core/specs/_operator_view_spec.py +135 -0
- skcomplex/core/specs/_scenario_spec.py +45 -0
- skcomplex/core/specs/_subsystem_spec.py +24 -0
- skcomplex/core/system.py +140 -0
- skcomplex/core/types.py +249 -0
- skcomplex/engine/__init__.py +5 -0
- skcomplex/engine/_utils.py +278 -0
- skcomplex/engine/backends/__init__.py +13 -0
- skcomplex/engine/backends/_base.py +329 -0
- skcomplex/engine/backends/_jax.py +285 -0
- skcomplex/engine/backends/_numba.py +601 -0
- skcomplex/engine/backends/_numba_components.py +67 -0
- skcomplex/engine/backends/_numba_loops.py +163 -0
- skcomplex/engine/backends/_numba_neighbours.py +435 -0
- skcomplex/engine/backends/_numba_printer.py +1023 -0
- skcomplex/engine/backends/_numba_stencils.py +66 -0
- skcomplex/engine/backends/_numpy.py +215 -0
- skcomplex/engine/compile/__init__.py +27 -0
- skcomplex/engine/compile/_base.py +582 -0
- skcomplex/engine/compile/_bound_renewal_spec.py +47 -0
- skcomplex/engine/compile/_compilation.py +351 -0
- skcomplex/engine/compile/_compile.py +100 -0
- skcomplex/engine/compile/_complex.py +216 -0
- skcomplex/engine/compile/_draw_lowering.py +373 -0
- skcomplex/engine/compile/_field_lowering.py +1668 -0
- skcomplex/engine/compile/_flows.py +691 -0
- skcomplex/engine/compile/_forms.py +48 -0
- skcomplex/engine/compile/_laws.py +42 -0
- skcomplex/engine/compile/_learning_compiler.py +481 -0
- skcomplex/engine/compile/_member_reductions.py +206 -0
- skcomplex/engine/compile/_members.py +244 -0
- skcomplex/engine/compile/_observables.py +940 -0
- skcomplex/engine/compile/_observer.py +185 -0
- skcomplex/engine/compile/_pass_compiler.py +1534 -0
- skcomplex/engine/compile/_probe.py +78 -0
- skcomplex/engine/compile/_renewal_law.py +70 -0
- skcomplex/engine/compile/passes/__init__.py +34 -0
- skcomplex/engine/compile/passes/_agents.py +111 -0
- skcomplex/engine/compile/passes/_agents_problem.py +143 -0
- skcomplex/engine/compile/passes/_census.py +808 -0
- skcomplex/engine/compile/passes/_check_fractional_noise.py +107 -0
- skcomplex/engine/compile/passes/_collect.py +31 -0
- skcomplex/engine/compile/passes/_compile_encounters.py +301 -0
- skcomplex/engine/compile/passes/_complex.py +198 -0
- skcomplex/engine/compile/passes/_conserved_noise.py +224 -0
- skcomplex/engine/compile/passes/_core.py +116 -0
- skcomplex/engine/compile/passes/_declare_renewals.py +84 -0
- skcomplex/engine/compile/passes/_draws.py +29 -0
- skcomplex/engine/compile/passes/_encounter_functions.py +60 -0
- skcomplex/engine/compile/passes/_encounter_jacobian.py +25 -0
- skcomplex/engine/compile/passes/_encounter_problem.py +32 -0
- skcomplex/engine/compile/passes/_events.py +204 -0
- skcomplex/engine/compile/passes/_expand_flows.py +32 -0
- skcomplex/engine/compile/passes/_field_functions.py +647 -0
- skcomplex/engine/compile/passes/_field_jacobian.py +38 -0
- skcomplex/engine/compile/passes/_field_problem.py +106 -0
- skcomplex/engine/compile/passes/_flatten.py +339 -0
- skcomplex/engine/compile/passes/_flows_problem.py +29 -0
- skcomplex/engine/compile/passes/_form.py +82 -0
- skcomplex/engine/compile/passes/_fractional_form.py +172 -0
- skcomplex/engine/compile/passes/_fractional_problem.py +91 -0
- skcomplex/engine/compile/passes/_functions.py +485 -0
- skcomplex/engine/compile/passes/_hilbert_space_error.py +10 -0
- skcomplex/engine/compile/passes/_hyperedges.py +598 -0
- skcomplex/engine/compile/passes/_jacobian.py +38 -0
- skcomplex/engine/compile/passes/_kernels.py +407 -0
- skcomplex/engine/compile/passes/_lattices.py +818 -0
- skcomplex/engine/compile/passes/_layout.py +667 -0
- skcomplex/engine/compile/passes/_lower_fields.py +225 -0
- skcomplex/engine/compile/passes/_lower_flows.py +28 -0
- skcomplex/engine/compile/passes/_markov.py +329 -0
- skcomplex/engine/compile/passes/_mask_requests.py +121 -0
- skcomplex/engine/compile/passes/_members.py +30 -0
- skcomplex/engine/compile/passes/_noise.py +196 -0
- skcomplex/engine/compile/passes/_operator_compiler.py +843 -0
- skcomplex/engine/compile/passes/_orders.py +409 -0
- skcomplex/engine/compile/passes/_owners.py +90 -0
- skcomplex/engine/compile/passes/_particles.py +69 -0
- skcomplex/engine/compile/passes/_plan.py +130 -0
- skcomplex/engine/compile/passes/_problem.py +802 -0
- skcomplex/engine/compile/passes/_reduction_lowering.py +1193 -0
- skcomplex/engine/compile/passes/_reductions.py +84 -0
- skcomplex/engine/compile/passes/_renewal_problem.py +357 -0
- skcomplex/engine/compile/passes/_request_jumps.py +51 -0
- skcomplex/engine/compile/passes/_residences.py +140 -0
- skcomplex/engine/compile/passes/_rows.py +162 -0
- skcomplex/engine/compile/passes/_set_renewals_apart.py +29 -0
- skcomplex/engine/compile/passes/_set_rules_apart.py +28 -0
- skcomplex/engine/compile/passes/_specs.py +1317 -0
- skcomplex/engine/compile/passes/_split_requests.py +44 -0
- skcomplex/engine/compile/passes/_topology_functions.py +265 -0
- skcomplex/engine/compile/passes/_topology_problem.py +27 -0
- skcomplex/engine/compile/passes/_towards.py +66 -0
- skcomplex/engine/compile/passes/_unpack_matches.py +29 -0
- skcomplex/engine/compile/passes/_unpack_renewals.py +41 -0
- skcomplex/engine/problems/__init__.py +61 -0
- skcomplex/engine/problems/_base.py +150 -0
- skcomplex/engine/problems/_base_problem_spec.py +153 -0
- skcomplex/engine/problems/_block_spec.py +48 -0
- skcomplex/engine/problems/_born_spec.py +24 -0
- skcomplex/engine/problems/_cascade_kernel.py +134 -0
- skcomplex/engine/problems/_collision_kernel.py +147 -0
- skcomplex/engine/problems/_compiled_delay_spec.py +21 -0
- skcomplex/engine/problems/_compiled_request_spec.py +46 -0
- skcomplex/engine/problems/_control_problem_spec.py +90 -0
- skcomplex/engine/problems/_declarations_spec.py +126 -0
- skcomplex/engine/problems/_delayed_state_spec.py +50 -0
- skcomplex/engine/problems/_diffusive_limit_spec.py +50 -0
- skcomplex/engine/problems/_draw_kernel.py +128 -0
- skcomplex/engine/problems/_drive_kernel.py +65 -0
- skcomplex/engine/problems/_dynamics_spec.py +28 -0
- skcomplex/engine/problems/_edge_row_search.py +78 -0
- skcomplex/engine/problems/_edge_search.py +64 -0
- skcomplex/engine/problems/_encounter_kernel.py +200 -0
- skcomplex/engine/problems/_event_kernel.py +70 -0
- skcomplex/engine/problems/_expression_printer.py +410 -0
- skcomplex/engine/problems/_extremal_kernel.py +125 -0
- skcomplex/engine/problems/_field_operator_kernel.py +105 -0
- skcomplex/engine/problems/_finite_volume_kernel.py +423 -0
- skcomplex/engine/problems/_flow_term_spec.py +45 -0
- skcomplex/engine/problems/_frame_spec.py +105 -0
- skcomplex/engine/problems/_jacobian_kernel.py +575 -0
- skcomplex/engine/problems/_kernel_spec.py +130 -0
- skcomplex/engine/problems/_kinetic_problem_spec.py +23 -0
- skcomplex/engine/problems/_law_kernel.py +604 -0
- skcomplex/engine/problems/_learning_problem_spec.py +67 -0
- skcomplex/engine/problems/_linear_term_spec.py +50 -0
- skcomplex/engine/problems/_loop_term_spec.py +44 -0
- skcomplex/engine/problems/_lowered_kernels_spec.py +59 -0
- skcomplex/engine/problems/_markov_kernel.py +68 -0
- skcomplex/engine/problems/_metric_search.py +155 -0
- skcomplex/engine/problems/_monte_carlo_kernel.py +213 -0
- skcomplex/engine/problems/_neighborhood_kernel.py +594 -0
- skcomplex/engine/problems/_noise_term_spec.py +26 -0
- skcomplex/engine/problems/_observed_spec.py +22 -0
- skcomplex/engine/problems/_operator_kernel.py +102 -0
- skcomplex/engine/problems/_operator_lowering.py +323 -0
- skcomplex/engine/problems/_operator_problem_spec.py +138 -0
- skcomplex/engine/problems/_output_spec.py +78 -0
- skcomplex/engine/problems/_pair_search.py +86 -0
- skcomplex/engine/problems/_partials_spec.py +27 -0
- skcomplex/engine/problems/_partition_spec.py +39 -0
- skcomplex/engine/problems/_printed_spec.py +24 -0
- skcomplex/engine/problems/_problem_functions_spec.py +102 -0
- skcomplex/engine/problems/_problem_spec.py +365 -0
- skcomplex/engine/problems/_random_stream.py +49 -0
- skcomplex/engine/problems/_record_spec.py +22 -0
- skcomplex/engine/problems/_recorded_spec.py +21 -0
- skcomplex/engine/problems/_reduction_kernel.py +254 -0
- skcomplex/engine/problems/_reduction_schedule_spec.py +97 -0
- skcomplex/engine/problems/_reference_spec.py +114 -0
- skcomplex/engine/problems/_relation_spec.py +29 -0
- skcomplex/engine/problems/_renewal_kernel.py +250 -0
- skcomplex/engine/problems/_request_spec.py +27 -0
- skcomplex/engine/problems/_rule_kernel.py +227 -0
- skcomplex/engine/problems/_set_symbol_spec.py +28 -0
- skcomplex/engine/problems/_source_loader.py +113 -0
- skcomplex/engine/problems/_static_search.py +42 -0
- skcomplex/engine/problems/_steps.py +39 -0
- skcomplex/engine/problems/_sweep_spec.py +26 -0
- skcomplex/engine/problems/_symmetry_spec.py +29 -0
- skcomplex/engine/problems/_too_dense.py +8 -0
- skcomplex/engine/problems/_topology_kernel.py +589 -0
- skcomplex/engine/problems/_transfer_network.py +4 -0
- skcomplex/engine/problems/_transfer_network_spec.py +50 -0
- skcomplex/engine/problems/_transfer_state_spec.py +68 -0
- skcomplex/engine/runtime/__init__.py +22 -0
- skcomplex/engine/runtime/_as_fast_as_possible.py +17 -0
- skcomplex/engine/runtime/_base.py +137 -0
- skcomplex/engine/runtime/_conservation.py +125 -0
- skcomplex/engine/runtime/_invariants.py +100 -0
- skcomplex/engine/runtime/_real_time.py +55 -0
- skcomplex/engine/runtime/_recorder.py +84 -0
- skcomplex/engine/runtime/_simulations.py +665 -0
- skcomplex/engine/runtime/_trajectories.py +314 -0
- skcomplex/engine/solvers/__init__.py +95 -0
- skcomplex/engine/solvers/_base.py +372 -0
- skcomplex/engine/solvers/_caputo.py +194 -0
- skcomplex/engine/solvers/_collocation.py +334 -0
- skcomplex/engine/solvers/_convolution.py +155 -0
- skcomplex/engine/solvers/_cosimulation.py +400 -0
- skcomplex/engine/solvers/_crank_nicolson.py +32 -0
- skcomplex/engine/solvers/_defaults.py +34 -0
- skcomplex/engine/solvers/_etdrk4.py +86 -0
- skcomplex/engine/solvers/_euler_maruyama.py +161 -0
- skcomplex/engine/solvers/_event_locator.py +249 -0
- skcomplex/engine/solvers/_external.py +94 -0
- skcomplex/engine/solvers/_fractional_abm.py +126 -0
- skcomplex/engine/solvers/_fractional_euler_maruyama.py +322 -0
- skcomplex/engine/solvers/_gillespie.py +135 -0
- skcomplex/engine/solvers/_gradient_descent.py +353 -0
- skcomplex/engine/solvers/_grunwald_letnikov.py +83 -0
- skcomplex/engine/solvers/_heun.py +89 -0
- skcomplex/engine/solvers/_history.py +184 -0
- skcomplex/engine/solvers/_horizon_error.py +10 -0
- skcomplex/engine/solvers/_imex2.py +40 -0
- skcomplex/engine/solvers/_imex_euler.py +35 -0
- skcomplex/engine/solvers/_jump_trajectories.py +98 -0
- skcomplex/engine/solvers/_kinetics.py +242 -0
- skcomplex/engine/solvers/_l1.py +91 -0
- skcomplex/engine/solvers/_lammps.py +745 -0
- skcomplex/engine/solvers/_lammps_fix_spec.py +41 -0
- skcomplex/engine/solvers/_lattice.py +79 -0
- skcomplex/engine/solvers/_lindblad.py +70 -0
- skcomplex/engine/solvers/_maps.py +105 -0
- skcomplex/engine/solvers/_mesa.py +1624 -0
- skcomplex/engine/solvers/_milstein.py +93 -0
- skcomplex/engine/solvers/_monte_carlo.py +43 -0
- skcomplex/engine/solvers/_operator.py +212 -0
- skcomplex/engine/solvers/_optimal_control.py +368 -0
- skcomplex/engine/solvers/_pontryagin.py +298 -0
- skcomplex/engine/solvers/_renewal.py +90 -0
- skcomplex/engine/solvers/_renewals.py +190 -0
- skcomplex/engine/solvers/_rk4.py +263 -0
- skcomplex/engine/solvers/_root.py +176 -0
- skcomplex/engine/solvers/_rows.py +49 -0
- skcomplex/engine/solvers/_scipy_ode.py +602 -0
- skcomplex/engine/solvers/_sde.py +164 -0
- skcomplex/engine/solvers/_semi_lagrangian.py +213 -0
- skcomplex/engine/solvers/_solver.py +159 -0
- skcomplex/engine/solvers/_split.py +394 -0
- skcomplex/engine/solvers/_ssprk.py +147 -0
- skcomplex/engine/solvers/_strang_splitting.py +178 -0
- skcomplex/engine/solvers/_unitary.py +68 -0
- skcomplex/engine/solvers/_velocity_verlet.py +171 -0
- skcomplex/engine/solvers/_yoshida4.py +242 -0
- skcomplex/engine/types.py +90 -0
- skcomplex/engine/viz/__init__.py +35 -0
- skcomplex/engine/viz/_agents.py +223 -0
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"""Persuasion models: agreeing pairs, majorities in small groups, and social impact."""
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# Author: Georgios Douzas <gdouzas@icloud.com>
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# License: MIT
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from typing import Annotated
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import networkx as nx
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import numpy as np
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from ....core.elements import GroupElement
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from ....core.spaces import LatticeSpace, NetworkSpace
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def _shares(size: int, share: float, random_state: int | np.random.Generator | None) -> Array:
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class PersuasionInteraction(GroupingInteraction):
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"""Persuasion of the Sznajd model, where an agreeing pair of neighbours convinces the neighbours of both.
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Every step every agent, in random order, picks a random neighbour, and when both share an opinion every neighbour
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of either adopts it. On a ring this is the original one-dimensional rule, where the pair convinces the two agents
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beside it.
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Args:
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label:
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The label of the interaction.
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The phase of the step the persuasion runs in, or `None` for the default phase.
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Examples:
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>>> from skcomplex.models.social.opinion_dynamics import PersuasionInteraction
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>>> PersuasionInteraction('persuasion', target='people').groups
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'neighborhood'
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phase: str | None = None,
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) -> None:
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super().__init__(label, target=target, groups='neighborhood', phase=phase)
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+
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+
def act_on(self, members: list[AgentViewProtocol], model: ModelViewProtocol) -> None:
|
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"""Convince the neighbours of the first member and a random neighbour of it when the two agree.
|
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+
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Args:
|
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members:
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The persuader, followed by its neighbours.
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+
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model:
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The model view of the rule.
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"""
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agent, *neighbors = [member for member in members if isinstance(member, PersuaderView)]
|
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if not neighbors:
|
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return
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+
partner = neighbors[int(model.rng.integers(len(neighbors)))]
|
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+
if partner.opinion != agent.opinion:
|
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+
return
|
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+
for other in [*neighbors, *partner.neighbors()]:
|
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|
+
if isinstance(other, PersuaderView):
|
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+
other.opinion = agent.opinion
|
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83
|
+
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84
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+
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+
@register_model(
|
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+
field='social/opinion_dynamics',
|
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|
+
tags=('opinion', 'agents', 'network', 'consensus'),
|
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|
+
references=('Sznajd-Weron and Sznajd 2000', 'Castellano, Fortunato, and Loreto 2009'),
|
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89
|
+
defaults={'until': 100},
|
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90
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+
)
|
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91
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+
def sznajd(
|
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graph: object = None,
|
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+
*,
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+
share: float = 0.5,
|
|
95
|
+
random_state: int | np.random.Generator | None = 0,
|
|
96
|
+
) -> System:
|
|
97
|
+
"""Return the Sznajd model, where agreeing pairs of agents convince their neighbours.
|
|
98
|
+
|
|
99
|
+
Args:
|
|
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|
+
graph:
|
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|
+
The NetworkX graph, or `None` for a ring of 50 agents.
|
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102
|
+
|
|
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+
share:
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+
The share of agents with opinion 1.
|
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+
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random_state:
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+
The seed or generator of the opinions.
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+
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+
Returns:
|
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+
system:
|
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+
The model, with the group `people` and the persuasion `persuasion`.
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+
|
|
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+
Examples:
|
|
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|
+
>>> import networkx as nx
|
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|
+
>>> from skcomplex.models.social.opinion_dynamics import sznajd
|
|
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|
+
>>> sznajd(nx.cycle_graph(8), random_state=0).elements[0].check().prepare().size_
|
|
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|
+
8
|
|
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|
+
"""
|
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+
graph = nx.cycle_graph(50) if graph is None else graph
|
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|
+
size = nx.number_of_nodes(graph)
|
|
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people = GroupElement(
|
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'people',
|
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|
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element=PersuaderElement,
|
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|
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size=size,
|
|
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|
+
values={'opinion': _shares(size, share, random_state)},
|
|
126
|
+
)
|
|
127
|
+
return System(
|
|
128
|
+
elements=[people],
|
|
129
|
+
interactions=[PersuasionInteraction('persuasion', target='people')],
|
|
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|
+
space=NetworkSpace(graph),
|
|
131
|
+
)
|
|
132
|
+
|
|
133
|
+
|
|
134
|
+
@register_model(
|
|
135
|
+
field='social/opinion_dynamics',
|
|
136
|
+
tags=('opinion', 'agents', 'majority', 'consensus'),
|
|
137
|
+
references=('Galam 2002', 'Castellano, Fortunato, and Loreto 2009'),
|
|
138
|
+
defaults={'until': 20},
|
|
139
|
+
)
|
|
140
|
+
def galam_majority(
|
|
141
|
+
n_agents: int = 300,
|
|
142
|
+
*,
|
|
143
|
+
group_size: int = 3,
|
|
144
|
+
share: float = 0.4,
|
|
145
|
+
random_state: int | np.random.Generator | None = 0,
|
|
146
|
+
) -> System:
|
|
147
|
+
"""Return the Galam majority model, where random groups adopt their majority until one opinion wins.
|
|
148
|
+
|
|
149
|
+
Args:
|
|
150
|
+
n_agents:
|
|
151
|
+
The number of agents.
|
|
152
|
+
|
|
153
|
+
group_size:
|
|
154
|
+
The number of agents in each discussion group.
|
|
155
|
+
|
|
156
|
+
share:
|
|
157
|
+
The share of agents with opinion 1.
|
|
158
|
+
|
|
159
|
+
random_state:
|
|
160
|
+
The seed or generator of the opinions.
|
|
161
|
+
|
|
162
|
+
Returns:
|
|
163
|
+
system:
|
|
164
|
+
The model, with the group `citizens`.
|
|
165
|
+
|
|
166
|
+
Examples:
|
|
167
|
+
>>> from skcomplex.models.social.opinion_dynamics import galam_majority
|
|
168
|
+
>>> galam_majority(30, random_state=0).elements[0].check().prepare().size_
|
|
169
|
+
30
|
|
170
|
+
"""
|
|
171
|
+
citizens = GroupElement(
|
|
172
|
+
'citizens',
|
|
173
|
+
element=CitizenElement,
|
|
174
|
+
size=n_agents,
|
|
175
|
+
values={'opinion': _shares(n_agents, share, random_state)},
|
|
176
|
+
)
|
|
177
|
+
return System(
|
|
178
|
+
elements=[citizens],
|
|
179
|
+
interactions=[DiscussionsInteraction('talks', target='citizens', size=group_size)],
|
|
180
|
+
)
|
|
181
|
+
|
|
182
|
+
|
|
183
|
+
@register_model(
|
|
184
|
+
field='social/opinion_dynamics',
|
|
185
|
+
tags=('opinion', 'agents', 'grid', 'clusters'),
|
|
186
|
+
references=('Nowak, Szamrej, and Latané 1990', 'Castellano, Fortunato, and Loreto 2009'),
|
|
187
|
+
defaults={'until': 20},
|
|
188
|
+
)
|
|
189
|
+
def social_impact(
|
|
190
|
+
width: int = 15,
|
|
191
|
+
height: int = 15,
|
|
192
|
+
*,
|
|
193
|
+
share: float = 0.5,
|
|
194
|
+
exponent: float = 2.0,
|
|
195
|
+
noise: float = 0.0,
|
|
196
|
+
random_state: int | np.random.Generator | None = 0,
|
|
197
|
+
) -> System:
|
|
198
|
+
"""Return the social impact model on a full grid, with random persuasiveness and supportiveness.
|
|
199
|
+
|
|
200
|
+
Args:
|
|
201
|
+
width:
|
|
202
|
+
The number of columns.
|
|
203
|
+
|
|
204
|
+
height:
|
|
205
|
+
The number of rows.
|
|
206
|
+
|
|
207
|
+
share:
|
|
208
|
+
The share of agents with opinion 1, the others holding -1.
|
|
209
|
+
|
|
210
|
+
exponent:
|
|
211
|
+
The exponent of the distance by which impact decays.
|
|
212
|
+
|
|
213
|
+
noise:
|
|
214
|
+
The half-width of the uniform random field.
|
|
215
|
+
|
|
216
|
+
random_state:
|
|
217
|
+
The seed or generator of the opinions and strengths.
|
|
218
|
+
|
|
219
|
+
Returns:
|
|
220
|
+
system:
|
|
221
|
+
The model, with the group `people`.
|
|
222
|
+
|
|
223
|
+
Examples:
|
|
224
|
+
>>> from skcomplex.models.social.opinion_dynamics import social_impact
|
|
225
|
+
>>> social_impact(4, 5, random_state=0).elements[0].check().prepare().size_
|
|
226
|
+
20
|
|
227
|
+
"""
|
|
228
|
+
rng = np.random.default_rng(random_state)
|
|
229
|
+
size = width * height
|
|
230
|
+
people = GroupElement(
|
|
231
|
+
'people',
|
|
232
|
+
element=InfluenceeElement,
|
|
233
|
+
size=size,
|
|
234
|
+
values={
|
|
235
|
+
'opinion': 2 * _shares(size, share, rng) - 1,
|
|
236
|
+
'persuasiveness': rng.random(size),
|
|
237
|
+
'supportiveness': rng.random(size),
|
|
238
|
+
'exponent': exponent,
|
|
239
|
+
'noise': noise,
|
|
240
|
+
},
|
|
241
|
+
location=[(column, row) for column in range(width) for row in range(height)],
|
|
242
|
+
)
|
|
243
|
+
return System(
|
|
244
|
+
elements=[people],
|
|
245
|
+
interactions=[SocialImpactInteraction('impact', target='people')],
|
|
246
|
+
space=LatticeSpace((width, height), boundary='fixed', capacity=1),
|
|
247
|
+
)
|
|
@@ -0,0 +1,53 @@
|
|
|
1
|
+
"""Define random pairs, a grouping that draws as many random ordered pairs of agents per step as there are agents."""
|
|
2
|
+
|
|
3
|
+
# Author: Georgios Douzas <gdouzas@icloud.com>
|
|
4
|
+
# License: MIT
|
|
5
|
+
|
|
6
|
+
from typing import Annotated
|
|
7
|
+
|
|
8
|
+
from ....core.interactions import GroupingInteraction
|
|
9
|
+
from ....core.types import AgentViewProtocol, ModelViewProtocol
|
|
10
|
+
from ....specs import RoleSpec
|
|
11
|
+
|
|
12
|
+
PAIR = 2
|
|
13
|
+
|
|
14
|
+
|
|
15
|
+
class RandomPairsInteraction(GroupingInteraction):
|
|
16
|
+
"""Grouping that draws as many random ordered pairs of distinct agents per step as there are agents.
|
|
17
|
+
|
|
18
|
+
The pairs are drawn independently, so an agent can meet several partners in one step, and every pair acts in random
|
|
19
|
+
order through `act_on`, which a subclass overrides. One unit of time holds one encounter per agent, as in the
|
|
20
|
+
random sequential encounters of mean-field opinion and convention models.
|
|
21
|
+
|
|
22
|
+
Args:
|
|
23
|
+
label:
|
|
24
|
+
The label of the interaction, unique among the parts of its system.
|
|
25
|
+
|
|
26
|
+
target:
|
|
27
|
+
The path of the group whose agents meet in pairs.
|
|
28
|
+
|
|
29
|
+
phase:
|
|
30
|
+
The phase of the step the encounters run in, or `None` for the default phase.
|
|
31
|
+
|
|
32
|
+
Examples:
|
|
33
|
+
>>> from skcomplex.models.social.opinion_dynamics import RandomPairsInteraction
|
|
34
|
+
>>> RandomPairsInteraction('meetings', target='people').groups
|
|
35
|
+
'pairs'
|
|
36
|
+
"""
|
|
37
|
+
|
|
38
|
+
def __init__(
|
|
39
|
+
self,
|
|
40
|
+
label: str,
|
|
41
|
+
*,
|
|
42
|
+
target: Annotated[str, RoleSpec()],
|
|
43
|
+
phase: str | None = None,
|
|
44
|
+
) -> None:
|
|
45
|
+
super().__init__(label, target=target, groups='pairs', phase=phase)
|
|
46
|
+
|
|
47
|
+
def _get_groups(self, model: ModelViewProtocol) -> list[list[AgentViewProtocol]]:
|
|
48
|
+
"""Return one random ordered pair of distinct agents per agent."""
|
|
49
|
+
agents = [agent for agent in model.agents('target') if agent.alive]
|
|
50
|
+
if len(agents) < PAIR:
|
|
51
|
+
return []
|
|
52
|
+
draws = [model.rng.choice(len(agents), size=PAIR, replace=False) for _ in agents]
|
|
53
|
+
return [[agents[int(first)], agents[int(second)]] for first, second in draws]
|
|
@@ -0,0 +1,39 @@
|
|
|
1
|
+
"""Triangle of a temporal hypergraph, active in every other half of a period from its own phase."""
|
|
2
|
+
|
|
3
|
+
# Author: Georgios Douzas <gdouzas@icloud.com>
|
|
4
|
+
# License: MIT
|
|
5
|
+
|
|
6
|
+
from typing import Annotated
|
|
7
|
+
|
|
8
|
+
from ....core.elements import Element
|
|
9
|
+
from ....specs import ParameterSpec, VisualSpec
|
|
10
|
+
|
|
11
|
+
|
|
12
|
+
class ScheduleElement(Element):
|
|
13
|
+
"""Triangle of a temporal hypergraph, active in every other half of a period from its own phase.
|
|
14
|
+
|
|
15
|
+
Args:
|
|
16
|
+
label:
|
|
17
|
+
The label of the triangle or the group.
|
|
18
|
+
|
|
19
|
+
visual:
|
|
20
|
+
How the triangle is drawn, or `None` for `default_visual_`.
|
|
21
|
+
|
|
22
|
+
phase:
|
|
23
|
+
The phase of the schedule, in radians.
|
|
24
|
+
|
|
25
|
+
Examples:
|
|
26
|
+
>>> from skcomplex.models.social.opinion_dynamics import ScheduleElement
|
|
27
|
+
>>> ScheduleElement('triangle', phase=1.0).phase
|
|
28
|
+
1.0
|
|
29
|
+
"""
|
|
30
|
+
|
|
31
|
+
def __init__(
|
|
32
|
+
self,
|
|
33
|
+
label: str,
|
|
34
|
+
visual: VisualSpec | None = None,
|
|
35
|
+
*,
|
|
36
|
+
phase: Annotated[float, ParameterSpec()] = 0.0,
|
|
37
|
+
) -> None:
|
|
38
|
+
super().__init__(label, visual=visual)
|
|
39
|
+
self.phase = phase
|
|
@@ -0,0 +1,71 @@
|
|
|
1
|
+
"""Rewiring of discordant edges by one end, which keeps the edge and moves its other end to a like-minded node."""
|
|
2
|
+
|
|
3
|
+
# Author: Georgios Douzas <gdouzas@icloud.com>
|
|
4
|
+
# License: MIT
|
|
5
|
+
|
|
6
|
+
from types import SimpleNamespace
|
|
7
|
+
from typing import Annotated
|
|
8
|
+
|
|
9
|
+
from ....core.interactions import TopologyInteraction
|
|
10
|
+
from ....specs import RoleSpec
|
|
11
|
+
|
|
12
|
+
SMALLEST_DEGREE = 1e-9
|
|
13
|
+
|
|
14
|
+
|
|
15
|
+
class SeparationInteraction(TopologyInteraction):
|
|
16
|
+
"""Rewiring of discordant edges by one end, which keeps the edge and moves its other end to a like-minded node.
|
|
17
|
+
|
|
18
|
+
It is a `TopologyInteraction` that rewires the edges of the voters. The end `keep` acts on an edge with
|
|
19
|
+
probability `activity / degree` per step, and when it holds the opinion `opinion` and the other end does not, it
|
|
20
|
+
rewires the edge with probability `rewiring`, drawing a new end among the voters of the opinion `opinion`.
|
|
21
|
+
|
|
22
|
+
Args:
|
|
23
|
+
label:
|
|
24
|
+
The label of the interaction.
|
|
25
|
+
|
|
26
|
+
voters:
|
|
27
|
+
The path of the voters on the nodes.
|
|
28
|
+
|
|
29
|
+
keep:
|
|
30
|
+
The end of an edge that acts and keeps the edge, `'source'` or `'target'`.
|
|
31
|
+
|
|
32
|
+
opinion:
|
|
33
|
+
The opinion of the end that acts, 0 or 1.
|
|
34
|
+
|
|
35
|
+
Examples:
|
|
36
|
+
>>> from skcomplex.models.social.opinion_dynamics import SeparationInteraction
|
|
37
|
+
>>> SeparationInteraction('separation', voters='voters', keep='target', opinion=0).check().action
|
|
38
|
+
'rewire'
|
|
39
|
+
"""
|
|
40
|
+
|
|
41
|
+
def __init__(
|
|
42
|
+
self,
|
|
43
|
+
label: str,
|
|
44
|
+
*,
|
|
45
|
+
voters: Annotated[str, RoleSpec()],
|
|
46
|
+
keep: str = 'source',
|
|
47
|
+
opinion: float = 1.0,
|
|
48
|
+
) -> None:
|
|
49
|
+
super().__init__(
|
|
50
|
+
label,
|
|
51
|
+
target=voters,
|
|
52
|
+
action='rewire',
|
|
53
|
+
probability=self._get_chance,
|
|
54
|
+
toward=self._get_weight,
|
|
55
|
+
keep=keep,
|
|
56
|
+
)
|
|
57
|
+
self.voters = voters
|
|
58
|
+
self.keep = keep
|
|
59
|
+
self.opinion = opinion
|
|
60
|
+
|
|
61
|
+
def _get_weight(self, node: SimpleNamespace) -> object:
|
|
62
|
+
"""Return the weight of a candidate node as a new end, 1 when it holds the opinion of the acting end."""
|
|
63
|
+
return node.opinion if self.opinion == 1 else 1 - node.opinion
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def _get_chance(self, namespace: SimpleNamespace) -> object:
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"""Return the probability that the acting end rewires the edge, when the ends hold different opinions."""
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actor, other = (namespace.source, namespace.target)[:: 1 if self.keep == 'source' else -1]
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chance = actor.activity * actor.rewiring / (actor.degree + SMALLEST_DEGREE)
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if self.opinion == 1:
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return chance * actor.opinion * (1 - other.opinion)
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return chance * (1 - actor.opinion) * other.opinion
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"""Synchronous update of the social impact model, where every agent takes the opinion of the stronger impact."""
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# Author: Georgios Douzas <gdouzas@icloud.com>
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# License: MIT
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from typing import Annotated
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import numpy as np
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from ....core.interactions import MapInteraction
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from ....core.types import ModelViewProtocol
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from ....specs import RoleSpec
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from ._influencee_view import InfluenceeView
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class SocialImpactInteraction(MapInteraction):
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"""Synchronous update of the social impact model, where every agent takes the opinion of the stronger impact.
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The impact on agent `i` is `I_i = sum_j t_j (1 - o_i o_j) / d_ij^a - sum_j s_j (1 + o_i o_j) / d_ij^a`, with the
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persuasiveness `t`, the supportiveness `s`, and the distance `d` on the grid, where an agent supports itself from
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distance 1. The impact is the net pressure to change, whatever the opinion, so an agent flips its opinion when
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`I_i + h_i > 0`, with a uniform random field `h_i`. Every agent decides from the opinions at the start of the step.
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Args:
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label:
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The label of the interaction.
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target:
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The path of the group of agents.
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Examples:
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>>> from skcomplex.models.social.opinion_dynamics import SocialImpactInteraction
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>>> SocialImpactInteraction('impact', target='people').check().form
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'agent'
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"""
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def __init__(
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self,
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label: str,
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*,
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target: Annotated[str, RoleSpec()],
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) -> None:
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super().__init__(label, target=target, state='opinion', function=self._get_opinion, form='agent')
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def _get_impact(self, agent: InfluenceeView, model: ModelViewProtocol) -> float:
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"""Return the net pressure to change on an agent from every agent of the group, itself from distance 1."""
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agents = [item for item in model.agents('target') if isinstance(item, InfluenceeView)]
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locations = np.array([item.location for item in agents], dtype=float)
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distances = np.linalg.norm(locations - np.asarray(agent.location, dtype=float), axis=-1)
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distances[[item.id == agent.id for item in agents]] = 1.0
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weights = distances**-agent.exponent
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agreement = agent.opinion * np.array([item.opinion for item in agents], dtype=float)
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persuasion = np.array([item.persuasiveness for item in agents], dtype=float)
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support = np.array([item.supportiveness for item in agents], dtype=float)
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return float((weights * persuasion * (1 - agreement)).sum() - (weights * support * (1 + agreement)).sum())
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def _get_opinion(self, agent: InfluenceeView, model: ModelViewProtocol) -> float:
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"""Return the opposite opinion of an agent under a positive net pressure to change, and its own otherwise."""
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field = model.rng.uniform(-agent.noise, agent.noise)
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return -agent.opinion if self._get_impact(agent, model) + field > 0 else float(agent.opinion)
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"""Opinion dynamics models: complex agents with many internal configurations whose interactions standardize them."""
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# Author: Georgios Douzas <gdouzas@icloud.com>
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# License: MIT
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from typing import Annotated
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import numpy as np
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from sage.all__sagemath_symbolics import oo
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from sage.sets.real_set import RealSet
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from ....core.elements import GroupElement
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from ....core.interactions import ChoiceInteraction, MapInteraction
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from ....core.spaces import DiscreteTime
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from ....core.system import System
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from ....core.types import ModelViewProtocol
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from ....specs import ObservableSpec, ParameterSpec, PhaseSpec, PhasesScheduleSpec, RoleSpec
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from ....types import AnyArray, Array
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from ..._catalog import register_model
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from ._complex_agent import ComplexAgentElement
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from ._complex_agent_view import ComplexAgentView
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MARKED = 2
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PHASE = 'default'
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def _standardization(spins: AnyArray) -> float:
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"""Return the share `q` of agents that show the characteristic, the mean of `|S_i|`."""
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return float(np.mean(np.abs(spins)))
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def _spin_of(agent: ComplexAgentView, model: ModelViewProtocol) -> float:
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"""Return the spin of the configuration of an agent."""
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return float(StandardizationInteraction._spins_of(np.array(agent.configuration)))
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class StandardizationInteraction(ChoiceInteraction):
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"""Changes of configuration of random agents, accepted with the logistic probability of their gain in utility.
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The utility of agent `i` is `u_i = K / N sum_j |S_i| |S_j| + J / N sum_j S_i S_j` over the other agents. An agent
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proposes a configuration drawn uniformly from the `H + 2` configurations, its own included, and takes it with the
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probability `1 / (1 + exp(-beta (u_i' - u_i)))` of the rule `'fermi'`, so the agents sample `P ~ exp(beta E)`. The
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utilities read the counts of the configurations of the group, so every proposal sees the changes accepted before
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it. In `standardized_agents`, a phase of visits draws `N` agents with replacement every unit of time.
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+
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Args:
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label:
|
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50
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The label of the interaction.
|
|
51
|
+
|
|
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target:
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The path of the group of agents.
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+
|
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K:
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The coupling of the characteristics `|S_i|`, which standardizes the agents.
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+
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J:
|
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The coupling of the spins `S_i`, which orders the standardized agents.
|
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60
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+
|
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61
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H:
|
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The number of configurations without the characteristic.
|
|
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+
|
|
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intensity:
|
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The intensity of choice `beta`, the inverse of the temperature.
|
|
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+
|
|
67
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+
activity:
|
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The probability that a visited agent proposes a configuration.
|
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+
|
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phase:
|
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The phase of the step the choice runs in, or `None` for the default phase.
|
|
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|
+
|
|
73
|
+
Examples:
|
|
74
|
+
>>> from skcomplex.models.social.opinion_dynamics import StandardizationInteraction
|
|
75
|
+
>>> StandardizationInteraction('standardization', target='agents', H=100).check().options[-1]
|
|
76
|
+
101.0
|
|
77
|
+
"""
|
|
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|
+
|
|
79
|
+
def __init__(
|
|
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|
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self,
|
|
81
|
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label: str,
|
|
82
|
+
*,
|
|
83
|
+
target: Annotated[str, RoleSpec()],
|
|
84
|
+
K: Annotated[float, ParameterSpec(domain=RealSet.closed_open(0, oo))] = 10.0,
|
|
85
|
+
J: Annotated[float, ParameterSpec()] = 1.0,
|
|
86
|
+
H: int = 50,
|
|
87
|
+
intensity: float = 2.0,
|
|
88
|
+
activity: float = 1.0,
|
|
89
|
+
phase: str | None = None,
|
|
90
|
+
) -> None:
|
|
91
|
+
super().__init__(
|
|
92
|
+
label,
|
|
93
|
+
target=target,
|
|
94
|
+
state='configuration',
|
|
95
|
+
options=tuple(float(option) for option in range(H + MARKED)),
|
|
96
|
+
utility=self._get_utility,
|
|
97
|
+
rule='fermi',
|
|
98
|
+
intensity=intensity,
|
|
99
|
+
schedule='member',
|
|
100
|
+
activity=activity,
|
|
101
|
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form='agent',
|
|
102
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phase=phase,
|
|
103
|
+
proposal='all',
|
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104
|
+
)
|
|
105
|
+
self.K = K
|
|
106
|
+
self.J = J
|
|
107
|
+
self.H = H
|
|
108
|
+
|
|
109
|
+
def _get_utility(self, agent: ComplexAgentView, model: ModelViewProtocol, option: float) -> float:
|
|
110
|
+
"""Return the utility of a configuration for an agent, from the counts of the configurations of the others."""
|
|
111
|
+
counts = model.composition('target', 'configuration')
|
|
112
|
+
up, down = counts.get(0.0, 0), counts.get(1.0, 0)
|
|
113
|
+
spin, new = float(StandardizationInteraction._spins_of(np.array(agent.configuration))), float(
|
|
114
|
+
StandardizationInteraction._spins_of(np.array(option)),
|
|
115
|
+
)
|
|
116
|
+
standardizing = model.parameter('K') * abs(new) * (up + down - abs(spin))
|
|
117
|
+
ordering = model.parameter('J') * new * (up - down - spin)
|
|
118
|
+
return (standardizing + ordering) / sum(counts.values())
|
|
119
|
+
|
|
120
|
+
@staticmethod
|
|
121
|
+
def _spins_of(configurations: Array) -> Array:
|
|
122
|
+
"""Return the spin of each configuration: 1 for configuration 0, -1 for configuration 1, and 0 otherwise."""
|
|
123
|
+
return np.select([configurations == 0, configurations == 1], [1.0, -1.0], 0.0)
|
|
124
|
+
|
|
125
|
+
|
|
126
|
+
@register_model(
|
|
127
|
+
field='social/opinion_dynamics',
|
|
128
|
+
tags=('agents', 'standardization', 'phase transition', 'large deviations', 'mean field'),
|
|
129
|
+
references=('Bertin 2021', 'Bertin and Jensen 2019'),
|
|
130
|
+
defaults={'until': 1000},
|
|
131
|
+
observables=lambda system: [
|
|
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|
+
ObservableSpec('q', group='agents', variable='spin', reduce=_standardization),
|
|
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ObservableSpec('m', group='agents', variable='spin', reduce='mean'),
|
|
134
|
+
],
|
|
135
|
+
)
|
|
136
|
+
def standardized_agents(
|
|
137
|
+
agents: int = 100,
|
|
138
|
+
*,
|
|
139
|
+
K: float = 10.0,
|
|
140
|
+
J: float = 1.0,
|
|
141
|
+
T: float = 0.5,
|
|
142
|
+
H: int = 50,
|
|
143
|
+
standardized: float = 1.0,
|
|
144
|
+
random_state: int | np.random.Generator | None = 0,
|
|
145
|
+
) -> System:
|
|
146
|
+
"""Return complex agents whose interactions make them standardized, all showing one characteristic, and ordered.
|
|
147
|
+
|
|
148
|
+
Below the temperature `T_S = K / (2 ln(H / 2))` the most probable share of agents with the characteristic jumps
|
|
149
|
+
from `q ~ 0` to `q ~ 1`, a discontinuous transition, and below `T_M = J` the standardized agents order, with a
|
|
150
|
+
magnetization `m` of either sign. Both states are long-lived on either side of `T_S` in large groups, so the
|
|
151
|
+
initial share `standardized` selects the branch that the run follows.
|
|
152
|
+
|
|
153
|
+
Args:
|
|
154
|
+
agents:
|
|
155
|
+
The number of agents `N`.
|
|
156
|
+
|
|
157
|
+
K:
|
|
158
|
+
The coupling of the characteristics `|S_i|`, which standardizes the agents.
|
|
159
|
+
|
|
160
|
+
J:
|
|
161
|
+
The coupling of the spins `S_i`, which orders the standardized agents.
|
|
162
|
+
|
|
163
|
+
T:
|
|
164
|
+
The temperature, the randomness of the choices.
|
|
165
|
+
|
|
166
|
+
H:
|
|
167
|
+
The number of configurations without the characteristic.
|
|
168
|
+
|
|
169
|
+
standardized:
|
|
170
|
+
The initial share of agents with the characteristic, each with a random spin. The others start in random
|
|
171
|
+
configurations without it.
|
|
172
|
+
|
|
173
|
+
random_state:
|
|
174
|
+
The seed or generator of the initial configurations.
|
|
175
|
+
|
|
176
|
+
Returns:
|
|
177
|
+
system:
|
|
178
|
+
The model, with the group `agents`, the share `q` of agents with the characteristic, and the magnetization
|
|
179
|
+
`m`, the mean spin.
|
|
180
|
+
|
|
181
|
+
Examples:
|
|
182
|
+
>>> from skcomplex.models.social.opinion_dynamics import standardized_agents
|
|
183
|
+
>>> standardized_agents(10, standardized=0.0).elements[0].values['spin'].tolist()
|
|
184
|
+
[0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0]
|
|
185
|
+
"""
|
|
186
|
+
rng = np.random.default_rng(random_state)
|
|
187
|
+
marked = rng.random(agents) < standardized
|
|
188
|
+
configurations = np.where(marked, rng.integers(MARKED, size=agents), rng.integers(MARKED, H + MARKED, size=agents))
|
|
189
|
+
configurations = configurations.astype(float)
|
|
190
|
+
return System(
|
|
191
|
+
elements=[
|
|
192
|
+
GroupElement(
|
|
193
|
+
'agents',
|
|
194
|
+
element=ComplexAgentElement,
|
|
195
|
+
size=agents,
|
|
196
|
+
values={'configuration': configurations, 'spin': StandardizationInteraction._spins_of(configurations)},
|
|
197
|
+
),
|
|
198
|
+
],
|
|
199
|
+
interactions=[
|
|
200
|
+
StandardizationInteraction('standardization', target='agents', K=K, J=J, H=H, intensity=1 / T, phase=PHASE),
|
|
201
|
+
MapInteraction(
|
|
202
|
+
'spin',
|
|
203
|
+
target='agents',
|
|
204
|
+
state='spin',
|
|
205
|
+
function=_spin_of,
|
|
206
|
+
schedule='member',
|
|
207
|
+
form='agent',
|
|
208
|
+
phase=PHASE,
|
|
209
|
+
),
|
|
210
|
+
],
|
|
211
|
+
time=DiscreteTime(schedule=PhasesScheduleSpec([PhaseSpec(PHASE, activation='visits', groups=('agents',))])),
|
|
212
|
+
)
|