meta-edc 0.3.7__py3-none-any.whl → 0.3.50__py3-none-any.whl
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- meta_ae/action_items.py +2 -2
- meta_ae/migrations/0017_auto_20221130_2257.py +12 -7
- meta_ae/tests/holidays.csv +1 -1
- meta_analytics/README.rst +17 -0
- meta_analytics/dataframes/__init__.py +19 -0
- meta_analytics/dataframes/constants.py +33 -0
- meta_analytics/dataframes/enrolled/__init__.py +1 -0
- meta_analytics/dataframes/enrolled/get_glucose_df.py +122 -0
- meta_analytics/dataframes/get_eos_df.py +26 -0
- meta_analytics/dataframes/get_last_imp_visits_df.py +101 -0
- meta_analytics/dataframes/glucose_endpoints/__init__.py +2 -0
- meta_analytics/dataframes/glucose_endpoints/endpoint_by_date.py +183 -0
- meta_analytics/dataframes/glucose_endpoints/glucose_endpoints_by_date.py +531 -0
- meta_analytics/dataframes/screening/__init__.py +2 -0
- meta_analytics/dataframes/screening/get_glucose_tested_only_df.py +20 -0
- meta_analytics/dataframes/screening/get_screening_df.py +163 -0
- meta_analytics/dataframes/utils.py +65 -0
- meta_analytics/get_tables.py +81 -0
- meta_analytics/tables/__init__.py +2 -0
- meta_analytics/tables/eligible.py +106 -0
- meta_analytics/tables/enrolled/__init__.py +0 -0
- meta_analytics/tables/enrolled/glucose.py +28 -0
- meta_analytics/tables/has_dm.py +61 -0
- meta_analytics/tests/__init__.py +0 -0
- meta_analytics/tests/test_endpoints_by_date.py +94 -0
- meta_auth/auth_objects.py +32 -3
- meta_auth/auths.py +18 -3
- meta_consent/action_items.py +18 -1
- meta_consent/admin/__init__.py +1 -0
- meta_consent/admin/subject_consent_v1_ext_admin.py +45 -0
- meta_consent/baker_recipes.py +5 -4
- meta_consent/consents.py +21 -2
- meta_consent/constants.py +1 -0
- meta_consent/forms/__init__.py +1 -0
- meta_consent/forms/subject_consent_v1_ext_form.py +16 -0
- meta_consent/locale/lg/LC_MESSAGES/django.po +69 -0
- meta_consent/locale/sw/LC_MESSAGES/django.po +12 -12
- meta_consent/migrations/0025_alter_historicalsubjectconsent_first_name_and_more.py +151 -0
- meta_consent/migrations/0026_historicalsubjectconsentv1ext_subjectconsentv1ext.py +544 -0
- meta_consent/migrations/0027_auto_20250111_0344.py +30 -0
- meta_consent/models/__init__.py +1 -0
- meta_consent/models/signals.py +34 -13
- meta_consent/models/subject_consent_v1.py +1 -3
- meta_consent/models/subject_consent_v1_ext.py +29 -0
- meta_consent/tests/holidays.csv +1 -1
- meta_consent/tests/tests/test_form_validators.py +1 -1
- meta_dashboard/locale/lg/LC_MESSAGES/django.po +30 -0
- meta_dashboard/locale/sw/LC_MESSAGES/django.po +11 -2
- meta_dashboard/navbars.py +3 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/buttons/eligibility_button.html +1 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/buttons/screening_button.html +1 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/screening/listboard.html +4 -4
- meta_dashboard/templates/meta_dashboard/bootstrap3/subject/dashboard/sidebar.html +24 -0
- meta_dashboard/templates/meta_dashboard/bootstrap3/subject/dashboard.html +3 -0
- meta_dashboard/templates/meta_dashboard/bootstrap3/subject/listboard.html +1 -2
- meta_dashboard/templatetags/meta_dashboard_extras.py +1 -1
- meta_dashboard/tests/holidays.csv +1 -1
- meta_dashboard/tests/urls.py +0 -1
- meta_dashboard/view_utils/__init__.py +6 -0
- meta_dashboard/view_utils/subject_screening_button.py +2 -2
- meta_dashboard/views/subject/dashboard/dashboard_view.py +38 -0
- meta_edc/__init__.py +7 -0
- meta_edc/celery.py +4 -13
- meta_edc/celery_live.py +18 -0
- meta_edc/celery_uat.py +24 -0
- meta_edc/management/commands/update_forms_reference.py +6 -2
- meta_edc/migrations/__init__.py +0 -0
- meta_edc/navbars.py +2 -1
- meta_edc/settings/debug.py +17 -9
- meta_edc/settings/defaults.py +82 -60
- meta_edc/settings/live.py +1 -9
- meta_edc/settings/uat.py +1 -14
- meta_edc/templates/meta_edc/bootstrap3/home.html +13 -7
- meta_edc/tests/tests/test_endpoints.py +22 -19
- meta_edc/urls.py +5 -2
- meta_edc/wsgi.py +1 -1
- meta_edc/wsgi_live.py +1 -1
- meta_edc/wsgi_uat.py +1 -1
- meta_edc-0.3.50.dist-info/AUTHORS +0 -0
- meta_edc-0.3.50.dist-info/METADATA +766 -0
- {meta_edc-0.3.7.dist-info → meta_edc-0.3.50.dist-info}/RECORD +400 -157
- {meta_edc-0.3.7.dist-info → meta_edc-0.3.50.dist-info}/WHEEL +1 -1
- {meta_edc-0.3.7.dist-info → meta_edc-0.3.50.dist-info}/top_level.txt +1 -0
- meta_pharmacy/admin/__init__.py +2 -0
- meta_pharmacy/admin/rx_admin.py +75 -0
- meta_pharmacy/admin/substitutions_admin.py +67 -0
- meta_pharmacy/admin_site.py +9 -0
- meta_pharmacy/apps.py +5 -0
- meta_pharmacy/constants.py +10 -0
- meta_pharmacy/forms/__init__.py +2 -0
- meta_pharmacy/forms/rx_form.py +16 -0
- meta_pharmacy/forms/substitutions_form.py +54 -0
- meta_pharmacy/label_configs.py +30 -0
- meta_pharmacy/labels/__init__.py +5 -0
- meta_pharmacy/labels/draw_label_for_subject_with_barcode.py +62 -0
- meta_pharmacy/labels/draw_label_for_subject_with_code128.py +14 -0
- meta_pharmacy/labels/draw_label_with_test_data.py +26 -0
- meta_pharmacy/labels/label_data.py +14 -0
- meta_pharmacy/labels/print_sheets.py +97 -0
- meta_pharmacy/list_data.py +8 -0
- meta_pharmacy/management/__init__.py +0 -0
- meta_pharmacy/management/commands/__init__.py +0 -0
- meta_pharmacy/management/commands/update_initial_pharmacy_data.py +10 -0
- meta_pharmacy/migrations/0002_initial.py +695 -0
- meta_pharmacy/migrations/0003_auto_20240909_2335.py +64 -0
- meta_pharmacy/migrations/0004_alter_historicalsubstitutions_report_datetime_and_more.py +23 -0
- meta_pharmacy/migrations/0005_auto_20240911_0352.py +17 -0
- meta_pharmacy/migrations/0006_lotnumber_label.py +289 -0
- meta_pharmacy/migrations/0007_lotnumber_medication.py +24 -0
- meta_pharmacy/migrations/0008_remove_lotnumber_medication_and_more.py +390 -0
- meta_pharmacy/migrations/0009_remove_historicalrx_slug.py +17 -0
- meta_pharmacy/models/__init__.py +3 -0
- meta_pharmacy/models/label_data.py +38 -0
- meta_pharmacy/models/rx.py +18 -0
- meta_pharmacy/models/rx_label.py +39 -0
- meta_pharmacy/models/substitutions.py +88 -0
- meta_pharmacy/urls.py +8 -0
- meta_pharmacy/utils/__init__.py +1 -0
- meta_pharmacy/utils/update_initial_pharmacy_data.py +146 -0
- meta_prn/action_items.py +52 -2
- meta_prn/admin/__init__.py +3 -0
- meta_prn/admin/dm_referral_admin.py +49 -0
- meta_prn/admin/offschedule_dm_referral_admin.py +47 -0
- meta_prn/admin/onschedule_dm_referral_admin.py +39 -0
- meta_prn/admin/pregnancy_notification_admin.py +6 -2
- meta_prn/baker_recipes.py +8 -1
- meta_prn/choices.py +2 -1
- meta_prn/constants.py +4 -1
- meta_prn/forms/__init__.py +2 -0
- meta_prn/forms/dm_referral_form.py +40 -0
- meta_prn/forms/offschedule_dm_referral_form.py +35 -0
- meta_prn/forms/offschedule_form.py +6 -0
- meta_prn/migrations/0034_auto_20220630_1110.py +3 -3
- meta_prn/migrations/0035_auto_20220630_1140.py +59 -56
- meta_prn/migrations/0057_historicalonscheduledmreferral_and_more.py +1156 -0
- meta_prn/migrations/0058_dmreferral_referral_note_and_more.py +29 -0
- meta_prn/migrations/0059_alter_historicaloffstudymedication_reason_and_more.py +53 -0
- meta_prn/models/__init__.py +13 -2
- meta_prn/models/dm_referral.py +39 -0
- meta_prn/models/offschedule.py +15 -1
- meta_prn/models/onschedule.py +6 -0
- meta_prn/models/signals.py +41 -1
- meta_prn/tests/tests/test_dm_referral.py +203 -0
- meta_reports/__init__.py +1 -0
- meta_reports/admin/__init__.py +15 -0
- meta_reports/admin/dbviews/__init__.py +14 -0
- meta_reports/admin/dbviews/glucose_summary_admin.py +116 -0
- meta_reports/admin/dbviews/imp_substitutions_admin.py +101 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/__init__.py +2 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/note_model_admin.py +53 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/unmanaged_model_admin.py +84 -0
- meta_reports/admin/dbviews/on_study_missing_lab_values_admin/__init__.py +1 -0
- meta_reports/admin/dbviews/on_study_missing_lab_values_admin/unmanaged_model_admin.py +13 -0
- meta_reports/admin/dbviews/on_study_missing_values_admin/__init__.py +1 -0
- meta_reports/admin/dbviews/on_study_missing_values_admin/unmanaged_model_admin.py +13 -0
- meta_reports/admin/dbviews/patient_history_missing_baseline_cd4_admin.py +58 -0
- meta_reports/admin/dbviews/unattended_three_in_row2_admin.py +47 -0
- meta_reports/admin/dbviews/unattended_three_in_row_admin.py +35 -0
- meta_reports/admin/dbviews/unattended_two_in_row_admin.py +34 -0
- meta_reports/admin/endpoints_admin.py +14 -0
- meta_reports/admin/endpoints_all_admin.py +13 -0
- meta_reports/admin/last_imp_refill_admin.py +181 -0
- meta_reports/admin/list_filters.py +30 -0
- meta_reports/admin/modeladmin_mixins.py +112 -0
- meta_reports/admin_site.py +5 -0
- meta_reports/apps.py +1 -16
- meta_reports/forms/__init__.py +1 -0
- meta_reports/forms/missing_ogtt_note_form.py +33 -0
- meta_reports/management/__init__.py +0 -0
- meta_reports/management/commands/__init__.py +0 -0
- meta_reports/management/commands/generate_endpoints.py +13 -0
- meta_reports/migrations/0001_initial.py +87 -0
- meta_reports/migrations/0002_patienthistorymissingbaselinecd4_and_more.py +64 -0
- meta_reports/migrations/0003_auto_20240618_0505.py +12 -0
- meta_reports/migrations/0004_alter_patienthistorymissingbaselinecd4_table.py +17 -0
- meta_reports/migrations/0005_endpoints.py +47 -0
- meta_reports/migrations/0006_endpoints_baseline_datetime.py +18 -0
- meta_reports/migrations/0007_alter_endpoints_endpoint_label_and_more.py +43 -0
- meta_reports/migrations/0008_alter_endpoints_endpoint_label.py +18 -0
- meta_reports/migrations/0009_alter_endpoints_options.py +21 -0
- meta_reports/migrations/0010_alter_patienthistorymissingbaselinecd4_options_and_more.py +49 -0
- meta_reports/migrations/0011_auto_20240813_0156.py +54 -0
- meta_reports/migrations/0012_auto_20240813_1516.py +48 -0
- meta_reports/migrations/0013_auto_20240813_1516.py +48 -0
- meta_reports/migrations/0014_auto_20240813_1517.py +48 -0
- meta_reports/migrations/0015_alter_endpoints_site.py +22 -0
- meta_reports/migrations/0016_missingscreeningogtt.py +47 -0
- meta_reports/migrations/0017_auto_20240819_1711.py +166 -0
- meta_reports/migrations/0018_auto_20240819_1713.py +54 -0
- meta_reports/migrations/0019_auto_20240819_1721.py +54 -0
- meta_reports/migrations/0020_auto_20240819_1811.py +54 -0
- meta_reports/migrations/0021_auto_20240819_1817.py +54 -0
- meta_reports/migrations/0022_auto_20240819_1832.py +54 -0
- meta_reports/migrations/0023_endpoints_meta_report_subject_a56b22_idx.py +20 -0
- meta_reports/migrations/0024_glucosesummary.py +38 -0
- meta_reports/migrations/0025_auto_20240822_0115.py +87 -0
- meta_reports/migrations/0026_auto_20240822_0120.py +54 -0
- meta_reports/migrations/0027_auto_20240822_0140.py +54 -0
- meta_reports/migrations/0028_alter_glucosesummary_options.py +22 -0
- meta_reports/migrations/0029_auto_20240822_0149.py +54 -0
- meta_reports/migrations/0030_auto_20240822_1637.py +54 -0
- meta_reports/migrations/0031_endpointsproxy.py +25 -0
- meta_reports/migrations/0032_alter_endpointsproxy_options.py +21 -0
- meta_reports/migrations/0033_auto_20240823_0012.py +54 -0
- meta_reports/migrations/0034_auto_20240823_1642.py +54 -0
- meta_reports/migrations/0035_historicalmissingogttnote_missingogttnote.py +457 -0
- meta_reports/migrations/0036_historicalmissingogttnote_fasting_and_more.py +86 -0
- meta_reports/migrations/0037_historicalmissingogttnote_result_status_and_more.py +51 -0
- meta_reports/migrations/0038_alter_historicalmissingogttnote_fasting_and_more.py +33 -0
- meta_reports/migrations/0039_onstudymissingvalues.py +44 -0
- meta_reports/migrations/0040_auto_20240824_0412.py +282 -0
- meta_reports/migrations/0041_auto_20240828_2229.py +14 -0
- meta_reports/migrations/0042_onstudymissinglabvalues.py +43 -0
- meta_reports/migrations/0043_auto_20240828_2309.py +88 -0
- meta_reports/migrations/0044_auto_20240828_2323.py +93 -0
- meta_reports/migrations/0045_auto_20240829_0248.py +54 -0
- meta_reports/migrations/0046_auto_20240829_0250.py +54 -0
- meta_reports/migrations/0047_impsubstitutions.py +56 -0
- meta_reports/migrations/0048_auto_20240909_2338.py +48 -0
- meta_reports/migrations/0049_auto_20240911_0327.py +54 -0
- meta_reports/migrations/0050_alter_endpoints_created.py +19 -0
- meta_reports/migrations/0051_remove_endpoints_baseline_datetime_and_more.py +40 -0
- meta_reports/migrations/0052_lastimpvisit.py +57 -0
- meta_reports/migrations/0053_rename_lastimpvisit_lastimprefill_and_more.py +31 -0
- meta_reports/models/__init__.py +16 -0
- meta_reports/models/dbviews/README +14 -0
- meta_reports/models/dbviews/__init__.py +9 -0
- meta_reports/models/dbviews/glucose_summary/__init__.py +2 -0
- meta_reports/models/dbviews/glucose_summary/unmanaged_model.py +35 -0
- meta_reports/models/dbviews/glucose_summary/view_definition.py +28 -0
- meta_reports/models/dbviews/imp_substitutions/__init__.py +1 -0
- meta_reports/models/dbviews/imp_substitutions/unmanaged_model.py +41 -0
- meta_reports/models/dbviews/imp_substitutions/view_definition.py +21 -0
- meta_reports/models/dbviews/missing_screening_ogtt/__init__.py +2 -0
- meta_reports/models/dbviews/missing_screening_ogtt/note_model.py +57 -0
- meta_reports/models/dbviews/missing_screening_ogtt/unmanaged_model.py +41 -0
- meta_reports/models/dbviews/missing_screening_ogtt/view_definition.py +20 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/__init__.py +1 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/qa_cases.py +53 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/unmanged_model.py +20 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/view_definition.py +17 -0
- meta_reports/models/dbviews/on_study_missing_values/__init__.py +1 -0
- meta_reports/models/dbviews/on_study_missing_values/qa_cases.py +54 -0
- meta_reports/models/dbviews/on_study_missing_values/unmanged_model.py +20 -0
- meta_reports/models/dbviews/on_study_missing_values/view_definition.py +17 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/__init__.py +1 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/unmanaged_model.py +31 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/view_definition.py +21 -0
- meta_reports/models/dbviews/unattended_three_in_row/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_three_in_row/unmanaged_model.py +29 -0
- meta_reports/models/dbviews/unattended_three_in_row/view_definition.py +31 -0
- meta_reports/models/dbviews/unattended_three_in_row2/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_three_in_row2/unmanaged_model.py +29 -0
- meta_reports/models/dbviews/unattended_three_in_row2/view_definition.py +50 -0
- meta_reports/models/dbviews/unattended_two_in_row/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_two_in_row/unmanaged_model.py +27 -0
- meta_reports/models/dbviews/unattended_two_in_row/view_definition.py +30 -0
- meta_reports/models/endpoints.py +31 -0
- meta_reports/models/endpoints_proxy.py +11 -0
- meta_reports/models/last_imp_refill.py +34 -0
- meta_reports/tasks.py +12 -0
- meta_reports/templates/meta_reports/columns/subject_identifier_column.html +1 -0
- meta_reports/templates/meta_reports/endpoints_all_change_list_note.html +12 -0
- meta_reports/templates/meta_reports/endpoints_change_list_note.html +12 -0
- meta_reports/tests/test_sql_gen.py +5 -0
- meta_reports/urls.py +8 -0
- meta_reports/utils.py +0 -0
- meta_screening/admin/subject_screening_admin.py +1 -0
- meta_screening/form_validators/screening_part_two.py +1 -1
- meta_screening/migrations/0062_remove_icpreferral_site_and_more.py +27 -0
- meta_screening/migrations/0063_alter_historicalscreeningpartone_fasting_duration_str_and_more.py +184 -0
- meta_screening/migrations/0064_remove_historicalscreeningpartone_fasting_duration_minutes_and_more.py +126 -0
- meta_screening/migrations/0065_auto_20240516_0352.py +31 -0
- meta_screening/migrations/0066_alter_historicalscreeningpartone_fasting_duration_delta_and_more.py +103 -0
- meta_screening/migrations/0067_alter_historicalscreeningpartone_report_datetime_and_more.py +84 -0
- meta_screening/models/__init__.py +1 -1
- meta_screening/tests/holidays.csv +1 -1
- meta_screening/tests/meta_test_case_mixin.py +17 -2
- meta_screening/tests/options.py +3 -3
- meta_sites/__init__.py +0 -1
- meta_sites/sites.py +8 -7
- meta_sites/tests/test_sites.py +1 -1
- meta_subject/action_items.py +25 -2
- meta_subject/admin/__init__.py +2 -1
- meta_subject/admin/birth_outcome_admin.py +4 -3
- meta_subject/admin/blood_results/__init__.py +1 -1
- meta_subject/admin/blood_results/{blood_results_lipid_admin.py → blood_results_lipids_admin.py} +7 -7
- meta_subject/admin/delivery_admin.py +0 -1
- meta_subject/admin/diabetes/__init__.py +2 -0
- meta_subject/admin/diabetes/dm_endpoint_admin.py +35 -0
- meta_subject/admin/{dm_referral_followup_admin.py → diabetes/dm_followup_admin.py} +15 -8
- meta_subject/admin/glucose_admin.py +1 -1
- meta_subject/admin/glucose_fbg_admin.py +38 -8
- meta_subject/admin/other_arv_regimens_admin.py +2 -0
- meta_subject/admin/study_medication_admin.py +10 -0
- meta_subject/admin/subject_visit_admin.py +4 -1
- meta_subject/baker_recipes.py +6 -0
- meta_subject/choices.py +8 -0
- meta_subject/constants.py +2 -1
- meta_subject/form_validators/__init__.py +2 -1
- meta_subject/form_validators/dm_endpoint_form_validator.py +35 -0
- meta_subject/form_validators/{dm_referral_followup_form_validator.py → dm_followup_form_validator.py} +41 -2
- meta_subject/forms/__init__.py +2 -1
- meta_subject/forms/blood_results/__init__.py +1 -1
- meta_subject/forms/blood_results/{blood_results_lipid_form.py → blood_results_lipids_form.py} +5 -5
- meta_subject/forms/diabetes/__init__.py +2 -0
- meta_subject/forms/diabetes/dm_endpoint_form.py +13 -0
- meta_subject/forms/diabetes/dm_followup_form.py +25 -0
- meta_subject/forms/glucose_fbg_form.py +38 -16
- meta_subject/forms/study_medication_form.py +35 -0
- meta_subject/forms/subject_visit_form.py +16 -0
- meta_subject/locale/lg/LC_MESSAGES/django.po +470 -0
- meta_subject/locale/sw/LC_MESSAGES/django.po +191 -89
- meta_subject/metadata_rules/metadata_rules.py +21 -0
- meta_subject/metadata_rules/predicates.py +67 -8
- meta_subject/migrations/0107_auto_20220415_0043.py +28 -22
- meta_subject/migrations/0126_auto_20220719_2142.py +4 -4
- meta_subject/migrations/0131_auto_20220722_0411.py +28 -23
- meta_subject/migrations/0132_auto_20220722_1825.py +10 -6
- meta_subject/migrations/0135_auto_20220722_2212.py +39 -35
- meta_subject/migrations/0150_auto_20220914_0039.py +15 -11
- meta_subject/migrations/0181_dmreferralfollowup_action_identifier_and_more.py +143 -0
- meta_subject/migrations/0182_rename_dmreferralfollowup_dmfollowup_and_more.py +54 -0
- meta_subject/migrations/0183_alter_dmfollowup_on_dm_medications_and_more.py +31 -0
- meta_subject/migrations/0184_alter_glucose_options_and_more.py +31 -0
- meta_subject/migrations/0185_alter_bloodresultsins_fasting_duration_str_and_more.py +82 -0
- meta_subject/migrations/0186_healtheconomicsupdate_singleton_field_and_more.py +55 -0
- meta_subject/migrations/0187_dmdiagnosis_historicaldmdiagnosis_dmdxresult_and_more.py +451 -0
- meta_subject/migrations/0188_historicaldmdxresult_dmdxresult.py +403 -0
- meta_subject/migrations/0189_alter_dmdxresult_options_and_more.py +116 -0
- meta_subject/migrations/0190_dmdiagnosis_dx_no_tmg_reason_and_more.py +65 -0
- meta_subject/migrations/0191_alter_dmdiagnosis_dx_no_tmg_reason_and_more.py +70 -0
- meta_subject/migrations/0192_rename_glucose_quantifier_glucosefbg_fbg_quantifier_and_more.py +44 -0
- meta_subject/migrations/0193_alter_glucosefbg_fbg_value_and_more.py +44 -0
- meta_subject/migrations/0194_remove_glucosefbg_assay_datetime_and_more.py +166 -0
- meta_subject/migrations/0195_alter_glucosefbg_fbg_datetime_and_more.py +27 -0
- meta_subject/migrations/0196_glucosefbg_fbg_not_performed_reason_and_more.py +49 -0
- meta_subject/migrations/0197_glucosefbg_fasting_duration_estimated_and_more.py +33 -0
- meta_subject/migrations/0198_alter_glucosefbg_fasting_duration_estimated_and_more.py +33 -0
- meta_subject/migrations/0199_auto_20240516_0247.py +18 -0
- meta_subject/migrations/0200_rename_fasting_duration_minutes_bloodresultsins_fasting_duration_delta_and_more.py +43 -0
- meta_subject/migrations/0201_alter_bloodresultsins_fasting_duration_delta_and_more.py +58 -0
- meta_subject/migrations/0202_auto_20240516_0315.py +32 -0
- meta_subject/migrations/0203_alter_bloodresultsins_fasting_duration_delta_and_more.py +67 -0
- meta_subject/migrations/0204_glucosefbg_repeat_fbg_date_and_more.py +27 -0
- meta_subject/migrations/0205_historicalsubjectrequisition_crf_status_and_more.py +80 -0
- meta_subject/migrations/0206_bloodresultsfbc_crf_status_and_more.py +62 -0
- meta_subject/migrations/0207_alter_historicalphysicalexam_waist_circumference_and_more.py +46 -0
- meta_subject/migrations/0208_birthoutcomes_crf_status_and_more.py +62 -0
- meta_subject/migrations/0209_remove_historicaldmdxresult_dm_diagnosis_and_more.py +37 -0
- meta_subject/migrations/0210_remove_dmdxresult_dm_diagnosis_and_more.py +123 -0
- meta_subject/migrations/0211_dmendpoint_endpoint_reached_and_more.py +45 -0
- meta_subject/migrations/0212_auto_20240827_2222.py +23 -0
- meta_subject/migrations/0213_rename_bloodresultslipid_bloodresultslipids_and_more.py +35 -0
- meta_subject/migrations/0214_historicalstudymedication_stock_codes_and_more.py +44 -0
- meta_subject/migrations/0215_alter_historicalstudymedication_stock_codes_and_more.py +46 -0
- meta_subject/model_mixins/arv_history_model_mixin.py +3 -3
- meta_subject/models/__init__.py +3 -2
- meta_subject/models/birth_outcomes.py +6 -1
- meta_subject/models/blood_results/__init__.py +1 -1
- meta_subject/models/blood_results/blood_results_fbc.py +3 -2
- meta_subject/models/blood_results/blood_results_hba1c.py +2 -0
- meta_subject/models/blood_results/blood_results_ins.py +2 -0
- meta_subject/models/blood_results/blood_results_lft.py +2 -0
- meta_subject/models/blood_results/{blood_results_lipid.py → blood_results_lipids.py} +5 -3
- meta_subject/models/blood_results/blood_results_rft.py +2 -0
- meta_subject/models/diabetes/__init__.py +2 -0
- meta_subject/models/diabetes/dm_endpoint.py +61 -0
- meta_subject/models/{dm_referral_followup.py → diabetes/dm_followup.py} +18 -6
- meta_subject/models/glucose.py +7 -14
- meta_subject/models/glucose_fbg.py +40 -51
- meta_subject/models/health_economics/health_economics_update.py +2 -0
- meta_subject/models/physical_exam.py +1 -0
- meta_subject/models/signals.py +19 -0
- meta_subject/models/subject_requisition.py +3 -4
- meta_subject/models/todo.txt +1 -1
- meta_subject/static/meta_subject/slider.css +1 -1
- meta_subject/templates/meta_subject/endpoint_review_instructions.html +1 -1
- meta_subject/templates/meta_subject/widgets/slider.html +0 -1
- meta_subject/tests/holidays.csv +1 -1
- meta_subject/tests/tests/test_egfr.py +6 -5
- meta_subject/tests/tests/test_medication_adherence.py +5 -1
- meta_subject/tests/tests/test_metadata_rules.py +34 -4
- meta_subject/tests/tests/test_mnsi.py +212 -121
- meta_subject/tests/tests/test_sf12.py +0 -12
- meta_visit_schedule/constants.py +7 -1
- meta_visit_schedule/tests/tests/test_schedule.py +4 -0
- meta_visit_schedule/visit_schedules/phase_three/crfs.py +87 -14
- meta_visit_schedule/visit_schedules/phase_three/requisitions.py +12 -0
- meta_visit_schedule/visit_schedules/phase_three/schedule.py +65 -2
- meta_visit_schedule/visit_schedules/phase_three/schedule_dm_referral.py +60 -0
- meta_visit_schedule/visit_schedules/phase_three/visit_schedule.py +2 -0
- tests/etc/randomization_list.csv +1 -1
- {meta_edc/tests → tests}/etc/randomization_list_phase_three.csv +4 -4
- tests/holidays.csv +1 -1
- tests/test_settings.py +186 -0
- meta_edc/tests/etc/user-aes-local.key +0 -1
- meta_edc/tests/etc/user-aes-restricted.key +0 -0
- meta_edc/tests/etc/user-rsa-local-private.pem +0 -27
- meta_edc/tests/etc/user-rsa-local-public.pem +0 -9
- meta_edc/tests/etc/user-rsa-restricted-private.pem +0 -27
- meta_edc/tests/etc/user-rsa-restricted-public.pem +0 -9
- meta_edc/tests/etc/user-salt-local.key +0 -0
- meta_edc/tests/etc/user-salt-restricted.key +0 -0
- meta_edc-0.3.7.dist-info/METADATA +0 -87
- meta_reports/tests/holidays.csv +0 -15
- meta_subject/forms/dm_referral_followup.py +0 -18
- /meta_edc-0.3.7.dist-info/AUTHORS → /meta_analytics/__init__.py +0 -0
- /meta_pharmacy/models.py → /meta_analytics/constants.py +0 -0
- /meta_reports/models.py → /meta_analytics/notebooks/cleaning/__init__.py +0 -0
- {meta_edc-0.3.7.dist-info → meta_edc-0.3.50.dist-info}/LICENSE +0 -0
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# Generated by Django 5.1 on 2024-08-19 15:11
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import django_db_views.migration_functions
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import django_db_views.operations
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from django.db import migrations
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class Migration(migrations.Migration):
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dependencies = [
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("meta_reports", "0019_auto_20240819_1721"),
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]
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operations = [
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.mysql",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.mysql",
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),
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atomic=False,
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),
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.postgresql",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.postgresql",
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),
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atomic=False,
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),
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, \n repeat_glucose_performed as repeated, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.sqlite3",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.sqlite3",
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atomic=False,
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]
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# Generated by Django 5.1 on 2024-08-19 15:17
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import django_db_views.migration_functions
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import django_db_views.operations
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from django.db import migrations
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class Migration(migrations.Migration):
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dependencies = [
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("meta_reports", "0020_auto_20240819_1811"),
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]
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operations = [
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.mysql",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.mysql",
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atomic=False,
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.postgresql",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.postgresql",
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),
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atomic=False,
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, \n repeat_glucose_performed as repeated, p3_ltfu, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.sqlite3",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, \n repeat_glucose_performed as repeated, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.sqlite3",
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# Generated by Django 5.1 on 2024-08-19 15:32
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import django_db_views.migration_functions
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import django_db_views.operations
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from django.db import migrations
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class Migration(migrations.Migration):
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dependencies = [
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("meta_reports", "0021_auto_20240819_1817"),
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]
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operations = [
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier,\n id as original_id\n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.mysql",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
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"missing_screening_ogtt_view",
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engine="django.db.backends.mysql",
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier,\n id as original_id \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
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+
"missing_screening_ogtt_view",
|
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+
engine="django.db.backends.postgresql",
|
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+
),
|
34
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+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
35
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+
"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
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+
"missing_screening_ogtt_view",
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+
engine="django.db.backends.postgresql",
|
38
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+
),
|
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+
atomic=False,
|
40
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+
),
|
41
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+
django_db_views.operations.ViewRunPython(
|
42
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
43
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+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, \n repeat_glucose_performed as repeated, p3_ltfu, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier,\n id as original_id \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
44
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+
"missing_screening_ogtt_view",
|
45
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+
engine="django.db.backends.sqlite3",
|
46
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+
),
|
47
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+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
48
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, \n repeat_glucose_performed as repeated, p3_ltfu, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
49
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+
"missing_screening_ogtt_view",
|
50
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+
engine="django.db.backends.sqlite3",
|
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+
),
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atomic=False,
|
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+
),
|
54
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+
]
|
@@ -0,0 +1,20 @@
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1
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+
# Generated by Django 5.0.8 on 2024-08-19 19:18
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+
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from django.db import migrations, models
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class Migration(migrations.Migration):
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7
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+
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dependencies = [
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+
("meta_reports", "0022_auto_20240819_1832"),
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("sites", "0002_alter_domain_unique"),
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+
]
|
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+
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operations = [
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14
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+
migrations.AddIndex(
|
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+
model_name="endpoints",
|
16
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+
index=models.Index(
|
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+
fields=["subject_identifier", "site"], name="meta_report_subject_a56b22_idx"
|
18
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+
),
|
19
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+
),
|
20
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+
]
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@@ -0,0 +1,38 @@
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# Generated by Django 5.0.8 on 2024-08-21 22:12
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+
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+
from django.db import migrations, models
|
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class Migration(migrations.Migration):
|
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+
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dependencies = [
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+
("meta_reports", "0023_endpoints_meta_report_subject_a56b22_idx"),
|
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+
]
|
11
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+
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12
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+
operations = [
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13
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+
migrations.CreateModel(
|
14
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+
name="GlucoseSummary",
|
15
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+
fields=[
|
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+
(
|
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+
"id",
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+
models.BigAutoField(
|
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+
auto_created=True, primary_key=True, serialize=False, verbose_name="ID"
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+
),
|
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+
),
|
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("report_model", models.CharField(max_length=50)),
|
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+
("subject_identifier", models.CharField(max_length=25)),
|
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+
("created", models.DateTimeField()),
|
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+
("fbg_value", models.DecimalField(decimal_places=2, max_digits=8, null=True)),
|
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+
("fbg_datetime", models.DateTimeField(null=True)),
|
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+
("ogtt_value", models.DecimalField(decimal_places=2, max_digits=8, null=True)),
|
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+
("ogtt_datetime", models.DateTimeField(null=True)),
|
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],
|
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options={
|
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"verbose_name": "GlucoseSummary",
|
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+
"verbose_name_plural": "GlucoseSummary",
|
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"db_table": "glucose_summary_view",
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"managed": False,
|
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"default_permissions": ("view", "export", "viewallsites"),
|
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},
|
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),
|
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+
]
|
@@ -0,0 +1,87 @@
|
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1
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+
# Generated by Django 5.0.8 on 2024-08-21 22:15
|
2
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+
|
3
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+
import django_db_views.migration_functions
|
4
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+
import django_db_views.operations
|
5
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+
from django.db import migrations
|
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+
|
7
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+
|
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+
class Migration(migrations.Migration):
|
9
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+
|
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+
dependencies = [
|
11
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+
("meta_reports", "0024_glucosesummary"),
|
12
|
+
]
|
13
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+
|
14
|
+
operations = [
|
15
|
+
django_db_views.operations.ViewRunPython(
|
16
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
17
|
+
"# noqa\nselect subject_identifier, fbg_value, fbg_datetime, null as 'ogtt_value', null as 'ogtt_datetime',\nfbg.site_id, 'glucose_summary_view' as report_model \nfrom meta_subject_glucosefbg as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\nUNION\nselect subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\nfbg.site_id, 'glucose_summary_view' as report_model\nfrom meta_subject_glucose as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\norder by subject_identifier, fbg_datetime",
|
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+
"glucose_summary_view",
|
19
|
+
engine="django.db.backends.mysql",
|
20
|
+
),
|
21
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
22
|
+
"", "glucose_summary_view", engine="django.db.backends.mysql"
|
23
|
+
),
|
24
|
+
atomic=False,
|
25
|
+
),
|
26
|
+
django_db_views.operations.ViewRunPython(
|
27
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
28
|
+
"# noqa\nselect subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\nfbg.site_id, 'glucose_summary_view' as report_model\nfrom meta_subject_glucosefbg as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\nUNION\nselect subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\nfbg.site_id, 'glucose_summary_view' as report_model\nfrom meta_subject_glucose as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\norder by subject_identifier, fbg_datetime",
|
29
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+
"glucose_summary_view",
|
30
|
+
engine="django.db.backends.postgresql",
|
31
|
+
),
|
32
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
33
|
+
"", "glucose_summary_view", engine="django.db.backends.postgresql"
|
34
|
+
),
|
35
|
+
atomic=False,
|
36
|
+
),
|
37
|
+
django_db_views.operations.ViewRunPython(
|
38
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
39
|
+
"# noqa\nselect subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\nfbg.site_id, 'glucose_summary_view' as report_model\nfrom meta_subject_glucosefbg as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\nUNION\nselect subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\nfbg.site_id, 'glucose_summary_view' as report_model\nfrom meta_subject_glucose as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\norder by subject_identifier, fbg_datetime",
|
40
|
+
"glucose_summary_view",
|
41
|
+
engine="django.db.backends.sqlite3",
|
42
|
+
),
|
43
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
44
|
+
"", "glucose_summary_view", engine="django.db.backends.sqlite3"
|
45
|
+
),
|
46
|
+
atomic=False,
|
47
|
+
),
|
48
|
+
django_db_views.operations.ViewRunPython(
|
49
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
50
|
+
"# noqa\n select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier,\n id as original_id\n from meta_screening_subjectscreening\n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
51
|
+
"missing_screening_ogtt_view",
|
52
|
+
engine="django.db.backends.mysql",
|
53
|
+
),
|
54
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
55
|
+
"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier,\n id as original_id\n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
56
|
+
"missing_screening_ogtt_view",
|
57
|
+
engine="django.db.backends.mysql",
|
58
|
+
),
|
59
|
+
atomic=False,
|
60
|
+
),
|
61
|
+
django_db_views.operations.ViewRunPython(
|
62
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
63
|
+
"# noqa\n select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier,\n id as original_id\n from meta_screening_subjectscreening\n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
64
|
+
"missing_screening_ogtt_view",
|
65
|
+
engine="django.db.backends.postgresql",
|
66
|
+
),
|
67
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
68
|
+
"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier,\n id as original_id \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
69
|
+
"missing_screening_ogtt_view",
|
70
|
+
engine="django.db.backends.postgresql",
|
71
|
+
),
|
72
|
+
atomic=False,
|
73
|
+
),
|
74
|
+
django_db_views.operations.ViewRunPython(
|
75
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
76
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value,\n repeat_glucose_performed as repeated, p3_ltfu, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier,\n id as original_id\n from meta_screening_subjectscreening\n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
77
|
+
"missing_screening_ogtt_view",
|
78
|
+
engine="django.db.backends.sqlite3",
|
79
|
+
),
|
80
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
81
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, \n repeat_glucose_performed as repeated, p3_ltfu, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier,\n id as original_id \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
82
|
+
"missing_screening_ogtt_view",
|
83
|
+
engine="django.db.backends.sqlite3",
|
84
|
+
),
|
85
|
+
atomic=False,
|
86
|
+
),
|
87
|
+
]
|
@@ -0,0 +1,54 @@
|
|
1
|
+
# Generated by Django 5.0.8 on 2024-08-21 22:20
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
|
+
|
8
|
+
class Migration(migrations.Migration):
|
9
|
+
|
10
|
+
dependencies = [
|
11
|
+
("meta_reports", "0025_auto_20240822_0115"),
|
12
|
+
]
|
13
|
+
|
14
|
+
operations = [
|
15
|
+
django_db_views.operations.ViewRunPython(
|
16
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
17
|
+
"# noqa\nselect *, uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as 'ogtt_value', null as 'ogtt_datetime', fbg.site_id \n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, fbg.site_id\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
18
|
+
"glucose_summary_view",
|
19
|
+
engine="django.db.backends.mysql",
|
20
|
+
),
|
21
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
22
|
+
"# noqa\nselect subject_identifier, fbg_value, fbg_datetime, null as 'ogtt_value', null as 'ogtt_datetime',\nfbg.site_id, 'glucose_summary_view' as report_model \nfrom meta_subject_glucosefbg as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\nUNION\nselect subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\nfbg.site_id, 'glucose_summary_view' as report_model\nfrom meta_subject_glucose as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\norder by subject_identifier, fbg_datetime",
|
23
|
+
"glucose_summary_view",
|
24
|
+
engine="django.db.backends.mysql",
|
25
|
+
),
|
26
|
+
atomic=False,
|
27
|
+
),
|
28
|
+
django_db_views.operations.ViewRunPython(
|
29
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
30
|
+
"# noqa\nselect *, get_random_uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime, fbg.site_id\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, fbg.site_id\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
31
|
+
"glucose_summary_view",
|
32
|
+
engine="django.db.backends.postgresql",
|
33
|
+
),
|
34
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
35
|
+
"# noqa\nselect subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\nfbg.site_id, 'glucose_summary_view' as report_model\nfrom meta_subject_glucosefbg as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\nUNION\nselect subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\nfbg.site_id, 'glucose_summary_view' as report_model\nfrom meta_subject_glucose as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\norder by subject_identifier, fbg_datetime",
|
36
|
+
"glucose_summary_view",
|
37
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+
engine="django.db.backends.postgresql",
|
38
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+
),
|
39
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+
atomic=False,
|
40
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+
),
|
41
|
+
django_db_views.operations.ViewRunPython(
|
42
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
43
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n fbg.site_id, 'glucose_summary_view' as report_model\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, 'glucose_summary_view' as report_model\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
44
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+
"glucose_summary_view",
|
45
|
+
engine="django.db.backends.sqlite3",
|
46
|
+
),
|
47
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
48
|
+
"# noqa\nselect subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\nfbg.site_id, 'glucose_summary_view' as report_model\nfrom meta_subject_glucosefbg as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\nUNION\nselect subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\nfbg.site_id, 'glucose_summary_view' as report_model\nfrom meta_subject_glucose as fbg \nleft join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\norder by subject_identifier, fbg_datetime",
|
49
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+
"glucose_summary_view",
|
50
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+
engine="django.db.backends.sqlite3",
|
51
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+
),
|
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+
atomic=False,
|
53
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+
),
|
54
|
+
]
|
@@ -0,0 +1,54 @@
|
|
1
|
+
# Generated by Django 5.0.8 on 2024-08-21 22:40
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
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+
|
8
|
+
class Migration(migrations.Migration):
|
9
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+
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10
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+
dependencies = [
|
11
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+
("meta_reports", "0026_auto_20240822_0120"),
|
12
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+
]
|
13
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+
|
14
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+
operations = [
|
15
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+
django_db_views.operations.ViewRunPython(
|
16
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+
code=django_db_views.migration_functions.ForwardViewMigration(
|
17
|
+
"# noqa\nselect *, uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as 'ogtt_value', null as 'ogtt_datetime',\n fbg.site_id, v.visit_code, v.visit_code_sequence \n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
18
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+
"glucose_summary_view",
|
19
|
+
engine="django.db.backends.mysql",
|
20
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+
),
|
21
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
22
|
+
"# noqa\nselect *, uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as 'ogtt_value', null as 'ogtt_datetime', fbg.site_id \n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, fbg.site_id\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
23
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+
"glucose_summary_view",
|
24
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+
engine="django.db.backends.mysql",
|
25
|
+
),
|
26
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+
atomic=False,
|
27
|
+
),
|
28
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+
django_db_views.operations.ViewRunPython(
|
29
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+
code=django_db_views.migration_functions.ForwardViewMigration(
|
30
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+
"# noqa\nselect *, get_random_uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
31
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+
"glucose_summary_view",
|
32
|
+
engine="django.db.backends.postgresql",
|
33
|
+
),
|
34
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
35
|
+
"# noqa\nselect *, get_random_uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime, fbg.site_id\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, fbg.site_id\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
36
|
+
"glucose_summary_view",
|
37
|
+
engine="django.db.backends.postgresql",
|
38
|
+
),
|
39
|
+
atomic=False,
|
40
|
+
),
|
41
|
+
django_db_views.operations.ViewRunPython(
|
42
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
43
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
44
|
+
"glucose_summary_view",
|
45
|
+
engine="django.db.backends.sqlite3",
|
46
|
+
),
|
47
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
48
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n fbg.site_id, 'glucose_summary_view' as report_model\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, 'glucose_summary_view' as report_model\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
49
|
+
"glucose_summary_view",
|
50
|
+
engine="django.db.backends.sqlite3",
|
51
|
+
),
|
52
|
+
atomic=False,
|
53
|
+
),
|
54
|
+
]
|
@@ -0,0 +1,22 @@
|
|
1
|
+
# Generated by Django 5.0.8 on 2024-08-21 22:48
|
2
|
+
|
3
|
+
from django.db import migrations
|
4
|
+
|
5
|
+
|
6
|
+
class Migration(migrations.Migration):
|
7
|
+
|
8
|
+
dependencies = [
|
9
|
+
("meta_reports", "0027_auto_20240822_0140"),
|
10
|
+
]
|
11
|
+
|
12
|
+
operations = [
|
13
|
+
migrations.AlterModelOptions(
|
14
|
+
name="glucosesummary",
|
15
|
+
options={
|
16
|
+
"default_permissions": ("view", "export", "viewallsites"),
|
17
|
+
"managed": False,
|
18
|
+
"verbose_name": "Glucose Summary",
|
19
|
+
"verbose_name_plural": "Glucose Summary",
|
20
|
+
},
|
21
|
+
),
|
22
|
+
]
|
@@ -0,0 +1,54 @@
|
|
1
|
+
# Generated by Django 5.0.8 on 2024-08-21 22:49
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
|
+
|
8
|
+
class Migration(migrations.Migration):
|
9
|
+
|
10
|
+
dependencies = [
|
11
|
+
("meta_reports", "0028_alter_glucosesummary_options"),
|
12
|
+
]
|
13
|
+
|
14
|
+
operations = [
|
15
|
+
django_db_views.operations.ViewRunPython(
|
16
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
17
|
+
"# noqa\nselect *, uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as 'ogtt_value', null as 'ogtt_datetime',\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
18
|
+
"glucose_summary_view",
|
19
|
+
engine="django.db.backends.mysql",
|
20
|
+
),
|
21
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
22
|
+
"# noqa\nselect *, uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as 'ogtt_value', null as 'ogtt_datetime',\n fbg.site_id, v.visit_code, v.visit_code_sequence \n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
23
|
+
"glucose_summary_view",
|
24
|
+
engine="django.db.backends.mysql",
|
25
|
+
),
|
26
|
+
atomic=False,
|
27
|
+
),
|
28
|
+
django_db_views.operations.ViewRunPython(
|
29
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
30
|
+
"# noqa\nselect *, get_random_uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
31
|
+
"glucose_summary_view",
|
32
|
+
engine="django.db.backends.postgresql",
|
33
|
+
),
|
34
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
35
|
+
"# noqa\nselect *, get_random_uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
36
|
+
"glucose_summary_view",
|
37
|
+
engine="django.db.backends.postgresql",
|
38
|
+
),
|
39
|
+
atomic=False,
|
40
|
+
),
|
41
|
+
django_db_views.operations.ViewRunPython(
|
42
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
43
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
44
|
+
"glucose_summary_view",
|
45
|
+
engine="django.db.backends.sqlite3",
|
46
|
+
),
|
47
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
48
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
49
|
+
"glucose_summary_view",
|
50
|
+
engine="django.db.backends.sqlite3",
|
51
|
+
),
|
52
|
+
atomic=False,
|
53
|
+
),
|
54
|
+
]
|
@@ -0,0 +1,54 @@
|
|
1
|
+
# Generated by Django 5.0.8 on 2024-08-22 13:37
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
|
+
|
8
|
+
class Migration(migrations.Migration):
|
9
|
+
|
10
|
+
dependencies = [
|
11
|
+
("meta_reports", "0029_auto_20240822_0149"),
|
12
|
+
]
|
13
|
+
|
14
|
+
operations = [
|
15
|
+
django_db_views.operations.ViewRunPython(
|
16
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
17
|
+
'# noqa\nselect *, uuid() as id, now() as created, \'meta_reports.glucose_summary_view\' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as \'ogtt_value\', null as \'ogtt_datetime\',\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as \'fasted\',\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucosefbg as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as \'fasted\',\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucose as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime',
|
18
|
+
"glucose_summary_view",
|
19
|
+
engine="django.db.backends.mysql",
|
20
|
+
),
|
21
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
22
|
+
"# noqa\nselect *, uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as 'ogtt_value', null as 'ogtt_datetime',\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
23
|
+
"glucose_summary_view",
|
24
|
+
engine="django.db.backends.mysql",
|
25
|
+
),
|
26
|
+
atomic=False,
|
27
|
+
),
|
28
|
+
django_db_views.operations.ViewRunPython(
|
29
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
30
|
+
'# noqa\nselect *, get_random_uuid() as id, now() as created, \'meta_reports.glucose_summary_view\' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as fasted,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucosefbg as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as fasted,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucose as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime',
|
31
|
+
"glucose_summary_view",
|
32
|
+
engine="django.db.backends.postgresql",
|
33
|
+
),
|
34
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
35
|
+
"# noqa\nselect *, get_random_uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
36
|
+
"glucose_summary_view",
|
37
|
+
engine="django.db.backends.postgresql",
|
38
|
+
),
|
39
|
+
atomic=False,
|
40
|
+
),
|
41
|
+
django_db_views.operations.ViewRunPython(
|
42
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
43
|
+
'# noqa\nSELECT *, lower(\n hex(randomblob(4)) || \'-\' || hex(randomblob(2)) || \'-\' || \'4\' ||\n substr(hex( randomblob(2)), 2) || \'-\' ||\n substr(\'AB89\', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || \'-\' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`, \'meta_reports.glucose_summary_view\' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as fasted,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucosefbg as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as fasted,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucose as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime',
|
44
|
+
"glucose_summary_view",
|
45
|
+
engine="django.db.backends.sqlite3",
|
46
|
+
),
|
47
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
48
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`, 'meta_reports.glucose_summary_view' as report_model\nfrom (\n select subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucosefbg as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n UNION\n select subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id\n from meta_subject_glucose as fbg \n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id) as A\norder by subject_identifier, fbg_datetime",
|
49
|
+
"glucose_summary_view",
|
50
|
+
engine="django.db.backends.sqlite3",
|
51
|
+
),
|
52
|
+
atomic=False,
|
53
|
+
),
|
54
|
+
]
|