meta-edc 0.3.39__py3-none-any.whl → 1.4.0__py3-none-any.whl

meta_subject/migrations/0234_remove_spfq_site_remove_spfq_subject_visit_and_more.py

@@ -0,0 +1,27 @@
+# Generated by Django 5.2.6 on 2025-09-30 22:50
+
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_subject", "0233_historicalspfq_spfq"),
+    ]
+
+    operations = [
+        migrations.RemoveField(
+            model_name="spfq",
+            name="site",
+        ),
+        migrations.RemoveField(
+            model_name="spfq",
+            name="subject_visit",
+        ),
+        migrations.DeleteModel(
+            name="HistoricalSpfq",
+        ),
+        migrations.DeleteModel(
+            name="Spfq",
+        ),
+    ]

meta_subject/migrations/0235_glucosefbg_endpoint_today_and_more.py

@@ -0,0 +1,606 @@
+# Generated by Django 5.2.7 on 2025-10-09 21:31
+
+import _socket
+import django.core.validators
+import django.db.models.deletion
+import django.utils.timezone
+import django_audit_fields.fields.hostname_modification_field
+import django_audit_fields.fields.userfield
+import django_audit_fields.fields.uuid_auto_field
+import django_revision.revision_field
+import edc_crf.model_mixins.crf_status_model_mixin
+import edc_model.models.fields.other_charfield
+import edc_model.validators.date
+import edc_protocol.validators
+import edc_visit_tracking.managers
+import simple_history.models
+import uuid
+from django.conf import settings
+from django.db import migrations, models
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        (
+            "meta_lists",
+            "0020_alter_abnormalfootappearanceobservations_extra_value_and_more",
+        ),
+        ("meta_subject", "0234_remove_spfq_site_remove_spfq_subject_visit_and_more"),
+        ("sites", "0002_alter_domain_unique"),
+        migrations.swappable_dependency(settings.AUTH_USER_MODEL),
+    ]
+
+    operations = [
+        migrations.AddField(
+            model_name="glucosefbg",
+            name="endpoint_today",
+            field=models.CharField(
+                choices=[
+                    ("Yes", "Yes"),
+                    ("PENDING", "No. A repeat FBG will be scheduled"),
+                    ("No", "No"),
+                    ("N/A", "Not applicable"),
+                ],
+                default="N/A",
+                help_text="Response is applicable if reporting after 24/11/2023 and both the FBG and OGTT were performed",
+                max_length=25,
+                verbose_name="Has the participant reached a study endpoint today?",
+            ),
+        ),
+        migrations.AddField(
+            model_name="historicalglucosefbg",
+            name="endpoint_today",
+            field=models.CharField(
+                choices=[
+                    ("Yes", "Yes"),
+                    ("PENDING", "No. A repeat FBG will be scheduled"),
+                    ("No", "No"),
+                    ("N/A", "Not applicable"),
+                ],
+                default="N/A",
+                help_text="Response is applicable if reporting after 24/11/2023 and both the FBG and OGTT were performed",
+                max_length=25,
+                verbose_name="Has the participant reached a study endpoint today?",
+            ),
+        ),
+        migrations.CreateModel(
+            name="HistoricalHivExitReview",
+            fields=[
+                (
+                    "revision",
+                    django_revision.revision_field.RevisionField(
+                        blank=True,
+                        default="",
+                        editable=False,
+                        help_text="System field. From git repository (tag:branch:commit), project metadata, project toml, project VERSION, or settings.",
+                        max_length=75,
+                        verbose_name="Revision",
+                    ),
+                ),
+                (
+                    "created",
+                    models.DateTimeField(blank=True, default=django.utils.timezone.now),
+                ),
+                (
+                    "modified",
+                    models.DateTimeField(blank=True, default=django.utils.timezone.now),
+                ),
+                (
+                    "user_created",
+                    django_audit_fields.fields.userfield.UserField(
+                        blank=True,
+                        default="",
+                        help_text="Updated by admin.save_model",
+                        max_length=50,
+                        verbose_name="user created",
+                    ),
+                ),
+                (
+                    "user_modified",
+                    django_audit_fields.fields.userfield.UserField(
+                        blank=True,
+                        default="",
+                        help_text="Updated by admin.save_model",
+                        max_length=50,
+                        verbose_name="user modified",
+                    ),
+                ),
+                (
+                    "hostname_created",
+                    models.CharField(
+                        blank=True,
+                        default=_socket.gethostname,
+                        help_text="System field. (modified on create only)",
+                        max_length=60,
+                        verbose_name="Hostname created",
+                    ),
+                ),
+                (
+                    "hostname_modified",
+                    django_audit_fields.fields.hostname_modification_field.HostnameModificationField(
+                        blank=True,
+                        default="",
+                        help_text="System field. (modified on every save)",
+                        max_length=50,
+                        verbose_name="Hostname modified",
+                    ),
+                ),
+                (
+                    "device_created",
+                    models.CharField(
+                        blank=True,
+                        default="",
+                        max_length=10,
+                        verbose_name="Device created",
+                    ),
+                ),
+                (
+                    "device_modified",
+                    models.CharField(
+                        blank=True,
+                        default="",
+                        max_length=10,
+                        verbose_name="Device modified",
+                    ),
+                ),
+                (
+                    "locale_created",
+                    models.CharField(
+                        blank=True,
+                        default="",
+                        help_text="Auto-updated by Modeladmin",
+                        max_length=10,
+                        verbose_name="Locale created",
+                    ),
+                ),
+                (
+                    "locale_modified",
+                    models.CharField(
+                        blank=True,
+                        default="",
+                        help_text="Auto-updated by Modeladmin",
+                        max_length=10,
+                        verbose_name="Locale modified",
+                    ),
+                ),
+                (
+                    "id",
+                    django_audit_fields.fields.uuid_auto_field.UUIDAutoField(
+                        blank=True,
+                        db_index=True,
+                        editable=False,
+                        help_text="System auto field. UUID primary key.",
+                    ),
+                ),
+                (
+                    "consent_model",
+                    models.CharField(blank=True, default="", max_length=50),
+                ),
+                (
+                    "consent_version",
+                    models.CharField(blank=True, default="", max_length=10),
+                ),
+                (
+                    "report_datetime",
+                    models.DateTimeField(
+                        default=django.utils.timezone.now,
+                        help_text="If reporting today, use today's date/time, otherwise use the date/time this information was reported.",
+                        validators=[
+                            edc_protocol.validators.datetime_not_before_study_start,
+                            edc_model.validators.date.datetime_not_future,
+                        ],
+                        verbose_name="Report Date",
+                    ),
+                ),
+                (
+                    "crf_status",
+                    models.CharField(
+                        choices=[
+                            ("INCOMPLETE", "Incomplete (some data pending)"),
+                            ("COMPLETE", "Complete"),
+                        ],
+                        default=edc_crf.model_mixins.crf_status_model_mixin.get_crf_status_default,
+                        help_text="If some data is still pending, flag this CRF as incomplete",
+                        max_length=25,
+                        verbose_name="CRF status",
+                    ),
+                ),
+                (
+                    "crf_status_comments",
+                    models.TextField(
+                        blank=True,
+                        default="",
+                        help_text="for example, why some data is still pending",
+                        verbose_name="Any comments related to status of this CRF",
+                    ),
+                ),
+                (
+                    "viral_load",
+                    models.IntegerField(
+                        blank=True,
+                        help_text="copies/mL",
+                        null=True,
+                        validators=[
+                            django.core.validators.MinValueValidator(0),
+                            django.core.validators.MaxValueValidator(999999),
+                        ],
+                        verbose_name="Last viral load",
+                    ),
+                ),
+                (
+                    "viral_load_date",
+                    models.DateField(
+                        blank=True, null=True, verbose_name="Date of last viral load"
+                    ),
+                ),
+                (
+                    "cd4",
+                    models.IntegerField(
+                        blank=True,
+                        help_text="cells/mm<sup>3</sup>",
+                        null=True,
+                        validators=[
+                            django.core.validators.MinValueValidator(0),
+                            django.core.validators.MaxValueValidator(3000),
+                        ],
+                        verbose_name="Last CD4",
+                    ),
+                ),
+                (
+                    "cd4_date",
+                    models.DateField(
+                        blank=True, null=True, verbose_name="Date of last CD4"
+                    ),
+                ),
+                (
+                    "other_current_arv_regimen",
+                    edc_model.models.fields.other_charfield.OtherCharField(
+                        blank=True,
+                        max_length=35,
+                        null=True,
+                        verbose_name="If other, please specify ...",
+                    ),
+                ),
+                (
+                    "current_arv_regimen_start_date",
+                    models.DateField(
+                        blank=True,
+                        null=True,
+                        verbose_name="When did the patient start this current antiretroviral therapy regimen?",
+                    ),
+                ),
+                (
+                    "history_id",
+                    models.UUIDField(
+                        default=uuid.uuid4,
+                        editable=False,
+                        primary_key=True,
+                        serialize=False,
+                    ),
+                ),
+                ("history_date", models.DateTimeField(db_index=True)),
+                ("history_change_reason", models.CharField(max_length=100, null=True)),
+                (
+                    "history_type",
+                    models.CharField(
+                        choices=[("+", "Created"), ("~", "Changed"), ("-", "Deleted")],
+                        max_length=1,
+                    ),
+                ),
+                (
+                    "current_arv_regimen",
+                    models.ForeignKey(
+                        blank=True,
+                        db_constraint=False,
+                        null=True,
+                        on_delete=django.db.models.deletion.DO_NOTHING,
+                        related_name="+",
+                        to="meta_lists.arvregimens",
+                        verbose_name="Which antiretroviral therapy regimen is the patient currently on?",
+                    ),
+                ),
+                (
+                    "history_user",
+                    models.ForeignKey(
+                        null=True,
+                        on_delete=django.db.models.deletion.SET_NULL,
+                        related_name="+",
+                        to=settings.AUTH_USER_MODEL,
+                    ),
+                ),
+                (
+                    "site",
+                    models.ForeignKey(
+                        blank=True,
+                        db_constraint=False,
+                        null=True,
+                        on_delete=django.db.models.deletion.DO_NOTHING,
+                        related_name="+",
+                        to="sites.site",
+                    ),
+                ),
+                (
+                    "subject_visit",
+                    models.ForeignKey(
+                        blank=True,
+                        db_constraint=False,
+                        null=True,
+                        on_delete=django.db.models.deletion.DO_NOTHING,
+                        related_name="+",
+                        to="meta_subject.subjectvisit",
+                    ),
+                ),
+            ],
+            options={
+                "verbose_name": "historical HIV Exit Review",
+                "verbose_name_plural": "historical HIV Exit Review",
+                "ordering": ("-history_date", "-history_id"),
+                "get_latest_by": ("history_date", "history_id"),
+            },
+            bases=(simple_history.models.HistoricalChanges, models.Model),
+        ),
+        migrations.CreateModel(
+            name="HivExitReview",
+            fields=[
+                (
+                    "revision",
+                    django_revision.revision_field.RevisionField(
+                        blank=True,
+                        default="",
+                        editable=False,
+                        help_text="System field. From git repository (tag:branch:commit), project metadata, project toml, project VERSION, or settings.",
+                        max_length=75,
+                        verbose_name="Revision",
+                    ),
+                ),
+                (
+                    "created",
+                    models.DateTimeField(blank=True, default=django.utils.timezone.now),
+                ),
+                (
+                    "modified",
+                    models.DateTimeField(blank=True, default=django.utils.timezone.now),
+                ),
+                (
+                    "user_created",
+                    django_audit_fields.fields.userfield.UserField(
+                        blank=True,
+                        default="",
+                        help_text="Updated by admin.save_model",
+                        max_length=50,
+                        verbose_name="user created",
+                    ),
+                ),
+                (
+                    "user_modified",
+                    django_audit_fields.fields.userfield.UserField(
+                        blank=True,
+                        default="",
+                        help_text="Updated by admin.save_model",
+                        max_length=50,
+                        verbose_name="user modified",
+                    ),
+                ),
+                (
+                    "hostname_created",
+                    models.CharField(
+                        blank=True,
+                        default=_socket.gethostname,
+                        help_text="System field. (modified on create only)",
+                        max_length=60,
+                        verbose_name="Hostname created",
+                    ),
+                ),
+                (
+                    "hostname_modified",
+                    django_audit_fields.fields.hostname_modification_field.HostnameModificationField(
+                        blank=True,
+                        default="",
+                        help_text="System field. (modified on every save)",
+                        max_length=50,
+                        verbose_name="Hostname modified",
+                    ),
+                ),
+                (
+                    "device_created",
+                    models.CharField(
+                        blank=True,
+                        default="",
+                        max_length=10,
+                        verbose_name="Device created",
+                    ),
+                ),
+                (
+                    "device_modified",
+                    models.CharField(
+                        blank=True,
+                        default="",
+                        max_length=10,
+                        verbose_name="Device modified",
+                    ),
+                ),
+                (
+                    "locale_created",
+                    models.CharField(
+                        blank=True,
+                        default="",
+                        help_text="Auto-updated by Modeladmin",
+                        max_length=10,
+                        verbose_name="Locale created",
+                    ),
+                ),
+                (
+                    "locale_modified",
+                    models.CharField(
+                        blank=True,
+                        default="",
+                        help_text="Auto-updated by Modeladmin",
+                        max_length=10,
+                        verbose_name="Locale modified",
+                    ),
+                ),
+                (
+                    "id",
+                    django_audit_fields.fields.uuid_auto_field.UUIDAutoField(
+                        blank=True,
+                        editable=False,
+                        help_text="System auto field. UUID primary key.",
+                        primary_key=True,
+                        serialize=False,
+                    ),
+                ),
+                (
+                    "consent_model",
+                    models.CharField(blank=True, default="", max_length=50),
+                ),
+                (
+                    "consent_version",
+                    models.CharField(blank=True, default="", max_length=10),
+                ),
+                (
+                    "report_datetime",
+                    models.DateTimeField(
+                        default=django.utils.timezone.now,
+                        help_text="If reporting today, use today's date/time, otherwise use the date/time this information was reported.",
+                        validators=[
+                            edc_protocol.validators.datetime_not_before_study_start,
+                            edc_model.validators.date.datetime_not_future,
+                        ],
+                        verbose_name="Report Date",
+                    ),
+                ),
+                (
+                    "crf_status",
+                    models.CharField(
+                        choices=[
+                            ("INCOMPLETE", "Incomplete (some data pending)"),
+                            ("COMPLETE", "Complete"),
+                        ],
+                        default=edc_crf.model_mixins.crf_status_model_mixin.get_crf_status_default,
+                        help_text="If some data is still pending, flag this CRF as incomplete",
+                        max_length=25,
+                        verbose_name="CRF status",
+                    ),
+                ),
+                (
+                    "crf_status_comments",
+                    models.TextField(
+                        blank=True,
+                        default="",
+                        help_text="for example, why some data is still pending",
+                        verbose_name="Any comments related to status of this CRF",
+                    ),
+                ),
+                (
+                    "viral_load",
+                    models.IntegerField(
+                        blank=True,
+                        help_text="copies/mL",
+                        null=True,
+                        validators=[
+                            django.core.validators.MinValueValidator(0),
+                            django.core.validators.MaxValueValidator(999999),
+                        ],
+                        verbose_name="Last viral load",
+                    ),
+                ),
+                (
+                    "viral_load_date",
+                    models.DateField(
+                        blank=True, null=True, verbose_name="Date of last viral load"
+                    ),
+                ),
+                (
+                    "cd4",
+                    models.IntegerField(
+                        blank=True,
+                        help_text="cells/mm<sup>3</sup>",
+                        null=True,
+                        validators=[
+                            django.core.validators.MinValueValidator(0),
+                            django.core.validators.MaxValueValidator(3000),
+                        ],
+                        verbose_name="Last CD4",
+                    ),
+                ),
+                (
+                    "cd4_date",
+                    models.DateField(
+                        blank=True, null=True, verbose_name="Date of last CD4"
+                    ),
+                ),
+                (
+                    "other_current_arv_regimen",
+                    edc_model.models.fields.other_charfield.OtherCharField(
+                        blank=True,
+                        max_length=35,
+                        null=True,
+                        verbose_name="If other, please specify ...",
+                    ),
+                ),
+                (
+                    "current_arv_regimen_start_date",
+                    models.DateField(
+                        blank=True,
+                        null=True,
+                        verbose_name="When did the patient start this current antiretroviral therapy regimen?",
+                    ),
+                ),
+                (
+                    "current_arv_regimen",
+                    models.ForeignKey(
+                        null=True,
+                        on_delete=django.db.models.deletion.PROTECT,
+                        related_name="last_arv_regimen",
+                        to="meta_lists.arvregimens",
+                        verbose_name="Which antiretroviral therapy regimen is the patient currently on?",
+                    ),
+                ),
+                (
+                    "site",
+                    models.ForeignKey(
+                        null=True,
+                        on_delete=django.db.models.deletion.PROTECT,
+                        related_name="+",
+                        to="sites.site",
+                    ),
+                ),
+                (
+                    "subject_visit",
+                    models.OneToOneField(
+                        on_delete=django.db.models.deletion.PROTECT,
+                        to="meta_subject.subjectvisit",
+                    ),
+                ),
+            ],
+            options={
+                "verbose_name": "HIV Exit Review",
+                "verbose_name_plural": "HIV Exit Review",
+                "abstract": False,
+                "default_permissions": (
+                    "add",
+                    "change",
+                    "delete",
+                    "view",
+                    "export",
+                    "import",
+                ),
+                "default_manager_name": "objects",
+                "indexes": [
+                    models.Index(
+                        fields=["subject_visit", "site"],
+                        name="meta_subjec_subject_d9ce05_idx",
+                    ),
+                    models.Index(
+                        fields=["subject_visit", "report_datetime"],
+                        name="meta_subjec_subject_ae7af9_idx",
+                    ),
+                ],
+            },
+            managers=[
+                ("objects", edc_visit_tracking.managers.CrfModelManager()),
+                ("on_site", edc_visit_tracking.managers.CrfCurrentSiteManager()),
+            ],
+        ),
+    ]

meta_subject/migrations/0236_alter_historicalhivexitreview_other_current_arv_regimen_and_more.py

@@ -0,0 +1,58 @@
+# Generated by Django 5.2.7 on 2025-10-14 00:10
+
+import edc_model.models.fields.other_charfield
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_subject", "0235_glucosefbg_endpoint_today_and_more"),
+    ]
+
+    operations = [
+        migrations.AlterField(
+            model_name="historicalhivexitreview",
+            name="other_current_arv_regimen",
+            field=edc_model.models.fields.other_charfield.OtherCharField(
+                blank=True,
+                default="",
+                max_length=35,
+                null=True,
+                verbose_name="If other, please specify ...",
+            ),
+        ),
+        migrations.AlterField(
+            model_name="historicalpatienthistory",
+            name="other_current_arv_regimen",
+            field=edc_model.models.fields.other_charfield.OtherCharField(
+                blank=True,
+                default="",
+                max_length=35,
+                null=True,
+                verbose_name="If other, please specify ...",
+            ),
+        ),
+        migrations.AlterField(
+            model_name="hivexitreview",
+            name="other_current_arv_regimen",
+            field=edc_model.models.fields.other_charfield.OtherCharField(
+                blank=True,
+                default="",
+                max_length=35,
+                null=True,
+                verbose_name="If other, please specify ...",
+            ),
+        ),
+        migrations.AlterField(
+            model_name="patienthistory",
+            name="other_current_arv_regimen",
+            field=edc_model.models.fields.other_charfield.OtherCharField(
+                blank=True,
+                default="",
+                max_length=35,
+                null=True,
+                verbose_name="If other, please specify ...",
+            ),
+        ),
+    ]