meta-edc 0.3.39__py3-none-any.whl → 1.4.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- meta_ae/action_items.py +38 -27
- meta_ae/admin/__init__.py +11 -0
- meta_ae/admin/ae_initial_admin.py +5 -2
- meta_ae/admin/ae_susar_admin.py +1 -1
- meta_ae/admin/death_report_admin.py +1 -1
- meta_ae/admin/modeladmin_mixins.py +14 -15
- meta_ae/baker_recipes.py +4 -6
- meta_ae/choices.py +1 -1
- meta_ae/forms/__init__.py +13 -0
- meta_ae/forms/death_report_form.py +1 -1
- meta_ae/forms/modelform_mixins.py +2 -2
- meta_ae/list_data.py +1 -1
- meta_ae/migrations/0001_initial.py +27 -27
- meta_ae/migrations/0006_aelocalreview_aesponsorreview.py +5 -5
- meta_ae/migrations/0017_auto_20221130_2257.py +1 -1
- meta_ae/migrations/0022_historicalhospitalization_hospitalization.py +5 -13
- meta_ae/migrations/0023_alter_aefollowup_action_identifier_and_more.py +2017 -0
- meta_ae/model_mixins/__init__.py +2 -0
- meta_ae/model_mixins/ae_review_model_mixin.py +6 -6
- meta_ae/model_mixins/death_report_model_mixin.py +3 -3
- meta_ae/models/__init__.py +13 -0
- meta_ae/models/hospitalization.py +3 -3
- meta_ae/pdf_reports/__init__.py +2 -0
- meta_ae/templatetags/meta_ae_extras.py +4 -6
- meta_analytics/.DS_Store +0 -0
- meta_analytics/README.rst +1 -2
- meta_analytics/dataframes/__init__.py +27 -0
- meta_analytics/dataframes/constants.py +5 -2
- meta_analytics/dataframes/get_eos_df.py +16 -4
- meta_analytics/dataframes/get_glucose_df.py +166 -0
- meta_analytics/dataframes/get_glucose_fbg_df.py +26 -0
- meta_analytics/dataframes/get_glucose_fbg_ogtt_df.py +21 -0
- meta_analytics/dataframes/get_last_imp_visits_df.py +12 -10
- meta_analytics/dataframes/glucose_endpoints/__init__.py +2 -0
- meta_analytics/dataframes/glucose_endpoints/endpoint_by_date.py +125 -124
- meta_analytics/dataframes/glucose_endpoints/glucose_endpoints_by_date.py +111 -235
- meta_analytics/dataframes/screening/__init__.py +2 -0
- meta_analytics/dataframes/screening/get_glucose_tested_only_df.py +1 -2
- meta_analytics/dataframes/screening/get_screening_df.py +9 -15
- meta_analytics/dataframes/utils.py +21 -12
- meta_analytics/get_tables.py +1 -2
- meta_analytics/tables/__init__.py +2 -0
- meta_analytics/tables/enrolled/glucose.py +2 -1
- meta_analytics/utils.py +81 -0
- meta_auth/auths.py +1 -1
- meta_consent/action_items.py +22 -3
- meta_consent/admin/__init__.py +7 -0
- meta_consent/admin/actions/__init__.py +2 -0
- meta_consent/admin/actions/create_missing_prescriptions.py +2 -2
- meta_consent/admin/list_filters.py +22 -0
- meta_consent/admin/modeladmin_mixins.py +4 -5
- meta_consent/admin/subject_consent_v1_ext_admin.py +93 -0
- meta_consent/baker_recipes.py +7 -7
- meta_consent/consents.py +15 -2
- meta_consent/constants.py +1 -0
- meta_consent/form_validators/__init__.py +2 -0
- meta_consent/forms/__init__.py +8 -0
- meta_consent/forms/subject_consent_v1_ext_form.py +47 -0
- meta_consent/forms/subject_reconsent_form.py +4 -4
- meta_consent/management/commands/create_missing_prescriptions.py +5 -3
- meta_consent/migrations/0001_initial.py +9 -9
- meta_consent/migrations/0024_historicalsubjectconsentv1.py +3 -8
- meta_consent/migrations/0026_historicalsubjectconsentv1ext_subjectconsentv1ext.py +535 -0
- meta_consent/migrations/0027_auto_20250111_0344.py +30 -0
- meta_consent/migrations/0028_historicalsubjectconsentv1ext_assessment_score_and_more.py +162 -0
- meta_consent/migrations/0029_alter_historicalsubjectconsentv1ext_agrees_to_extension_and_more.py +33 -0
- meta_consent/migrations/0030_auto_20250120_2114.py +40 -0
- meta_consent/migrations/0031_alter_historicalsubjectconsent_guardian_name_and_more.py +124 -0
- meta_consent/migrations/0032_alter_historicalsubjectconsent_device_created_and_more.py +678 -0
- meta_consent/migrations/0033_historicalsubjectconsentspfq_subjectconsentspfq.py +615 -0
- meta_consent/migrations/0034_remove_subjectconsentspfq_site_and_more.py +23 -0
- meta_consent/migrations/0035_alter_historicalsubjectconsent_consent_definition_name_and_more.py +43 -0
- meta_consent/models/__init__.py +10 -0
- meta_consent/models/model_mixins.py +1 -2
- meta_consent/models/signals.py +25 -11
- meta_consent/models/subject_consent.py +2 -2
- meta_consent/models/subject_consent_v1.py +0 -1
- meta_consent/models/subject_consent_v1_ext.py +34 -0
- meta_consent/models/subject_reconsent.py +4 -4
- meta_dashboard/navbars.py +2 -6
- meta_dashboard/patterns.py +1 -1
- meta_dashboard/templates/meta_dashboard/{bootstrap3/buttons → buttons}/eligibility_button.html +1 -1
- meta_dashboard/templates/meta_dashboard/{bootstrap3/buttons → buttons}/screening_button.html +1 -1
- meta_dashboard/templates/meta_dashboard/subject/dashboard/sidebar.html +24 -0
- meta_dashboard/templates/meta_dashboard/{bootstrap3/subject → subject}/dashboard/top_bar.html +1 -1
- meta_dashboard/templates/meta_dashboard/subject/dashboard.html +14 -0
- meta_dashboard/templatetags/meta_dashboard_extras.py +9 -14
- meta_dashboard/urls.py +5 -5
- meta_dashboard/view_utils/__init__.py +13 -0
- meta_dashboard/view_utils/subject_screening_button.py +13 -20
- meta_dashboard/views/__init__.py +8 -0
- meta_dashboard/views/ae/__init__.py +2 -0
- meta_dashboard/views/ae/ae_listboard_view.py +1 -1
- meta_dashboard/views/ae/death_report_listboard_view.py +1 -1
- meta_dashboard/views/screening/__init__.py +2 -0
- meta_dashboard/views/screening/listboard_view.py +2 -3
- meta_dashboard/views/subject/__init__.py +2 -0
- meta_dashboard/views/subject/dashboard/__init__.py +2 -0
- meta_dashboard/views/subject/dashboard/dashboard_view.py +19 -8
- meta_dashboard/views/subject/listboard/__init__.py +2 -0
- meta_dashboard/views/subject/listboard/listboard_view.py +2 -3
- meta_edc/__init__.py +5 -9
- meta_edc/admin.py +3 -4
- meta_edc/celery.py +2 -2
- meta_edc/celery_live.py +19 -0
- meta_edc/celery_uat.py +25 -0
- meta_edc/management/commands/update_forms_reference.py +16 -14
- meta_edc/meta_version.py +2 -2
- meta_edc/navbars.py +7 -5
- meta_edc/settings/debug.py +13 -4
- meta_edc/settings/defaults.py +55 -18
- meta_edc/settings/live.py +4 -1
- meta_edc/settings/logging.py +9 -4
- meta_edc/settings/minimal.py +4 -5
- meta_edc/settings/uat.py +3 -1
- meta_edc/templates/meta_edc/{bootstrap3/base.html → base.html} +1 -1
- meta_edc/templates/meta_edc/{bootstrap3/home.html → home.html} +2 -2
- meta_edc/urls.py +3 -1
- meta_edc/utils.py +3 -1
- meta_edc/views/__init__.py +2 -0
- meta_edc/views/home_view.py +1 -2
- meta_edc-1.4.0.dist-info/METADATA +174 -0
- {meta_edc-0.3.39.dist-info → meta_edc-1.4.0.dist-info}/RECORD +578 -586
- meta_edc-1.4.0.dist-info/WHEEL +4 -0
- meta_labs/list_data.py +2 -2
- meta_labs/reportables.py +80 -11
- meta_lists/list_data.py +13 -4
- meta_lists/migrations/0008_auto_20200528_1517.py +2 -2
- meta_lists/migrations/0019_auto_20250128_0143.py +48 -0
- meta_lists/migrations/0020_alter_abnormalfootappearanceobservations_extra_value_and_more.py +404 -0
- meta_pharmacy/admin/__init__.py +5 -0
- meta_pharmacy/admin/rx_admin.py +1 -0
- meta_pharmacy/admin/substitutions_admin.py +3 -3
- meta_pharmacy/constants.py +1 -1
- meta_pharmacy/forms/__init__.py +2 -0
- meta_pharmacy/forms/rx_form.py +0 -1
- meta_pharmacy/forms/substitutions_form.py +6 -4
- meta_pharmacy/labels/__init__.py +5 -2
- meta_pharmacy/labels/draw_label_for_subject_with_barcode.py +4 -1
- meta_pharmacy/labels/draw_label_with_test_data.py +2 -2
- meta_pharmacy/labels/label_data.py +1 -2
- meta_pharmacy/labels/print_sheets.py +4 -6
- meta_pharmacy/management/commands/update_initial_pharmacy_data.py +4 -3
- meta_pharmacy/migrations/0002_initial.py +7 -20
- meta_pharmacy/migrations/0003_auto_20240909_2335.py +3 -2
- meta_pharmacy/migrations/0006_lotnumber_label.py +5 -14
- meta_pharmacy/migrations/0008_remove_lotnumber_medication_and_more.py +5 -6
- meta_pharmacy/migrations/0010_alter_historicallabeldata_device_created_and_more.py +382 -0
- meta_pharmacy/models/__init__.py +7 -0
- meta_pharmacy/models/label_data.py +4 -5
- meta_pharmacy/models/rx_label.py +0 -1
- meta_pharmacy/models/substitutions.py +4 -4
- meta_pharmacy/prepare_meta_pharmacy.py +1 -1
- meta_pharmacy/utils/__init__.py +2 -0
- meta_pharmacy/utils/update_initial_pharmacy_data.py +1 -1
- meta_prn/action_items.py +44 -45
- meta_prn/admin/__init__.py +16 -0
- meta_prn/admin/dm_referral_admin.py +2 -1
- meta_prn/admin/end_of_study_admin.py +26 -15
- meta_prn/admin/loss_to_followup_admin.py +3 -2
- meta_prn/admin/off_study_medication_admin.py +5 -6
- meta_prn/admin/offschedule_admin.py +12 -11
- meta_prn/admin/offschedule_dm_referral_admin.py +11 -10
- meta_prn/admin/offschedule_postnatal_admin.py +15 -7
- meta_prn/admin/offschedule_pregnancy_admin.py +18 -9
- meta_prn/admin/onschedule_admin.py +7 -8
- meta_prn/admin/onschedule_dm_referral_admin.py +11 -12
- meta_prn/admin/pregnancy_notification_admin.py +5 -6
- meta_prn/admin/protocol_incident_admin.py +1 -1
- meta_prn/admin/subject_transfer_admin.py +1 -1
- meta_prn/baker_recipes.py +10 -10
- meta_prn/choices.py +11 -7
- meta_prn/constants.py +1 -0
- meta_prn/form_validators/__init__.py +5 -0
- meta_prn/form_validators/end_of_study.py +65 -20
- meta_prn/form_validators/protocol_incident.py +1 -1
- meta_prn/forms/__init__.py +13 -0
- meta_prn/forms/dm_referral_form.py +2 -8
- meta_prn/forms/end_of_study_form.py +1 -1
- meta_prn/forms/loss_to_followup_form.py +1 -1
- meta_prn/forms/off_study_medication_form.py +2 -2
- meta_prn/forms/offschedule_form.py +25 -0
- meta_prn/forms/pregnancy_notification_form.py +15 -17
- meta_prn/list_data.py +3 -3
- meta_prn/migrations/0001_initial.py +25 -25
- meta_prn/migrations/0017_auto_20220307_1929.py +5 -5
- meta_prn/migrations/0018_auto_20220309_2106.py +9 -9
- meta_prn/migrations/0021_auto_20220316_2147.py +13 -13
- meta_prn/migrations/0022_auto_20220318_0133.py +9 -9
- meta_prn/migrations/0032_historicalegfrnotification_egfrnotification.py +5 -13
- meta_prn/migrations/0034_auto_20220630_1110.py +1 -1
- meta_prn/migrations/0035_auto_20220630_1140.py +1 -1
- meta_prn/migrations/0038_alter_endofstudy_delivery_date_and_more.py +5 -13
- meta_prn/migrations/0041_endofstudy_transfer_date_and_more.py +5 -13
- meta_prn/migrations/0057_historicalonscheduledmreferral_and_more.py +13 -38
- meta_prn/migrations/0060_alter_onschedule_managers_and_more.py +55 -0
- meta_prn/migrations/0061_auto_20250115_2025.py +56 -0
- meta_prn/migrations/0062_alter_endofstudy_offstudy_reason_and_more.py +72 -0
- meta_prn/migrations/0063_historicaloffstudymedication_singleton_field_and_more.py +37 -0
- meta_prn/migrations/0064_auto_20250602_2143.py +18 -0
- meta_prn/migrations/0065_alter_historicaloffstudymedication_subject_identifier_and_more.py +23 -0
- meta_prn/migrations/0066_alter_historicallosstofollowup_subject_identifier_and_more.py +23 -0
- meta_prn/migrations/0067_alter_offschedule_managers_and_more.py +2557 -0
- meta_prn/migrations/0068_alter_dmreferral_referral_note_and_more.py +235 -0
- meta_prn/migrations/0069_alter_historicaloffstudymedication_singleton_field_and_more.py +37 -0
- meta_prn/models/__init__.py +20 -0
- meta_prn/models/dm_referral.py +2 -2
- meta_prn/models/end_of_study.py +28 -23
- meta_prn/models/loss_to_followup.py +8 -10
- meta_prn/models/off_study_medication.py +7 -4
- meta_prn/models/offschedule.py +4 -4
- meta_prn/models/pregnancy_notification.py +3 -5
- meta_prn/models/protocol_incident.py +5 -2
- meta_prn/models/signals.py +16 -14
- meta_prn/models/subject_transfer.py +7 -0
- meta_prn/templates/meta_prn/eos/additional_instructions.html +3 -0
- meta_prn/templates/meta_prn/offschedule/additional_instructions.html +2 -0
- meta_rando/migrations/0001_initial.py +5 -5
- meta_rando/migrations/0006_alter_historicalrandomizationlist_allocated_user_and_more.py +130 -0
- meta_rando/migrations/0007_spfqlist.py +197 -0
- meta_rando/migrations/0008_delete_spfqlist.py +16 -0
- meta_rando/models/__init__.py +1 -0
- meta_rando/{models.py → models/randomization_list.py} +3 -3
- meta_rando/randomizers.py +2 -2
- meta_reports/__init__.py +2 -0
- meta_reports/admin/__init__.py +16 -0
- meta_reports/admin/dbviews/__init__.py +13 -0
- meta_reports/admin/dbviews/glucose_summary_admin.py +7 -7
- meta_reports/admin/dbviews/imp_substitutions_admin.py +14 -13
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/__init__.py +5 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/note_model_admin.py +27 -3
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/unmanaged_model_admin.py +7 -7
- meta_reports/admin/dbviews/on_study_missing_lab_values_admin/__init__.py +2 -0
- meta_reports/admin/dbviews/on_study_missing_lab_values_admin/unmanaged_model_admin.py +0 -3
- meta_reports/admin/dbviews/on_study_missing_values_admin/__init__.py +2 -0
- meta_reports/admin/dbviews/on_study_missing_values_admin/unmanaged_model_admin.py +0 -1
- meta_reports/admin/dbviews/patient_history_missing_baseline_cd4_admin.py +9 -9
- meta_reports/admin/dbviews/unattended_three_in_row2_admin.py +6 -6
- meta_reports/admin/dbviews/unattended_three_in_row_admin.py +5 -5
- meta_reports/admin/dbviews/unattended_two_in_row_admin.py +5 -5
- meta_reports/admin/endpoints_admin.py +1 -1
- meta_reports/admin/endpoints_all_admin.py +0 -1
- meta_reports/admin/last_imp_refill_admin.py +33 -36
- meta_reports/admin/list_filters.py +3 -3
- meta_reports/admin/modeladmin_mixins.py +10 -17
- meta_reports/death_report.py +2 -2
- meta_reports/forms/__init__.py +2 -0
- meta_reports/forms/missing_ogtt_note_form.py +3 -4
- meta_reports/management/commands/generate_endpoints.py +5 -4
- meta_reports/migrations/0035_historicalmissingogttnote_missingogttnote.py +5 -14
- meta_reports/migrations/0054_auto_20250422_2003.py +81 -0
- meta_reports/migrations/0055_alter_glucosesummary_table.py +17 -0
- meta_reports/migrations/0056_auto_20250422_2214.py +54 -0
- meta_reports/migrations/0057_auto_20250422_2224.py +54 -0
- meta_reports/migrations/0058_auto_20250422_2232.py +54 -0
- meta_reports/migrations/0059_alter_endpoints_created_and_more.py +161 -0
- meta_reports/migrations/0060_auto_20250926_0242.py +366 -0
- meta_reports/migrations/0061_auto_20251004_0043.py +21 -0
- meta_reports/migrations/0062_auto_20251004_0106.py +21 -0
- meta_reports/models/__init__.py +17 -0
- meta_reports/models/dbviews/__init__.py +14 -0
- meta_reports/models/dbviews/glucose_summary/__init__.py +2 -0
- meta_reports/models/dbviews/glucose_summary/unmanaged_model.py +15 -3
- meta_reports/models/dbviews/glucose_summary/view_definition.py +8 -5
- meta_reports/models/dbviews/imp_substitutions/__init__.py +2 -0
- meta_reports/models/dbviews/imp_substitutions/unmanaged_model.py +1 -2
- meta_reports/models/dbviews/imp_substitutions/view_definition.py +1 -1
- meta_reports/models/dbviews/missing_screening_ogtt/__init__.py +2 -0
- meta_reports/models/dbviews/missing_screening_ogtt/note_model.py +2 -2
- meta_reports/models/dbviews/missing_screening_ogtt/unmanaged_model.py +4 -3
- meta_reports/models/dbviews/on_study_missing_lab_values/__init__.py +2 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/qa_cases.py +13 -11
- meta_reports/models/dbviews/on_study_missing_lab_values/unmanged_model.py +0 -1
- meta_reports/models/dbviews/on_study_missing_values/__init__.py +2 -0
- meta_reports/models/dbviews/on_study_missing_values/qa_cases.py +19 -1
- meta_reports/models/dbviews/on_study_missing_values/unmanged_model.py +0 -1
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/__init__.py +2 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/unmanaged_model.py +0 -1
- meta_reports/models/dbviews/unattended_three_in_row/__init__.py +2 -0
- meta_reports/models/dbviews/unattended_three_in_row/unmanaged_model.py +0 -1
- meta_reports/models/dbviews/unattended_three_in_row2/__init__.py +2 -0
- meta_reports/models/dbviews/unattended_three_in_row2/unmanaged_model.py +0 -1
- meta_reports/models/dbviews/unattended_two_in_row/__init__.py +2 -0
- meta_reports/models/dbviews/unattended_two_in_row/unmanaged_model.py +0 -1
- meta_reports/models/endpoints.py +8 -4
- meta_reports/models/last_imp_refill.py +2 -3
- meta_reports/pdf_report.py +2 -2
- meta_reports/tasks.py +4 -3
- meta_reports/templates/meta_reports/columns/subject_identifier_column.html +1 -1
- meta_reports/templates/meta_reports/endpoints_all_change_list_note.html +1 -1
- meta_reports/templates/meta_reports/endpoints_change_list_note.html +1 -1
- meta_reports/templates/meta_reports/last_imp_refill/changelist_note.html +13 -0
- meta_screening/admin/__init__.py +8 -0
- meta_screening/admin/fieldsets.py +13 -15
- meta_screening/admin/list_filters.py +7 -5
- meta_screening/admin/screening_part_one_admin.py +1 -3
- meta_screening/admin/screening_part_three_admin.py +2 -3
- meta_screening/admin/screening_part_two_admin.py +7 -10
- meta_screening/admin/subject_refusal_admin.py +5 -3
- meta_screening/admin/subject_screening_admin.py +21 -10
- meta_screening/baker_recipes.py +18 -10
- meta_screening/calculators.py +1 -1
- meta_screening/choices.py +1 -1
- meta_screening/constants.py +1 -1
- meta_screening/eligibility/__init__.py +9 -0
- meta_screening/eligibility/eligibility.py +21 -14
- meta_screening/eligibility/eligibility_part_one.py +1 -1
- meta_screening/eligibility/eligibility_part_three/__init__.py +2 -0
- meta_screening/eligibility/eligibility_part_three/base_eligibility_part_three.py +68 -49
- meta_screening/eligibility/eligibility_part_three/eligibility_part_three_phase_three.py +14 -15
- meta_screening/eligibility/eligibility_part_two.py +1 -1
- meta_screening/form_validators/__init__.py +8 -0
- meta_screening/form_validators/screening_part_one.py +1 -1
- meta_screening/form_validators/screening_part_three.py +6 -2
- meta_screening/form_validators/screening_part_two.py +1 -1
- meta_screening/form_validators/subject_refusal.py +1 -1
- meta_screening/forms/__init__.py +20 -0
- meta_screening/forms/field_lists.py +16 -18
- meta_screening/forms/screening_part_one_form.py +2 -2
- meta_screening/forms/screening_part_three_form.py +5 -3
- meta_screening/forms/screening_part_two_form.py +1 -5
- meta_screening/forms/subject_refusal_form.py +0 -4
- meta_screening/forms/subject_screening_form.py +0 -4
- meta_screening/migrations/0001_initial.py +15 -15
- meta_screening/migrations/0010_auto_20191106_0828.py +5 -5
- meta_screening/migrations/0012_auto_20191107_0427.py +1 -1
- meta_screening/migrations/0068_alter_historicalscreeningpartone_acute_condition_and_more.py +1579 -0
- meta_screening/model_mixins/__init__.py +8 -0
- meta_screening/model_mixins/calculated_model_mixin.py +2 -2
- meta_screening/model_mixins/creatinine_fields_model_mixin.py +1 -1
- meta_screening/model_mixins/eligibility_model_mixin.py +6 -4
- meta_screening/model_mixins/part_one_fields_model_mixin.py +16 -19
- meta_screening/model_mixins/part_three_fields_model_mixin.py +6 -7
- meta_screening/model_mixins/part_two_fields_model_mixin.py +19 -17
- meta_screening/models/__init__.py +9 -0
- meta_screening/models/icp_referral.py +5 -5
- meta_screening/models/proxy_models.py +1 -1
- meta_screening/models/signals.py +10 -11
- meta_screening/models/subject_refusal.py +1 -1
- meta_screening/models/subject_screening.py +2 -4
- meta_subject/action_items.py +18 -14
- meta_subject/admin/__init__.py +42 -0
- meta_subject/admin/birth_outcome_admin.py +7 -9
- meta_subject/admin/blood_results/__init__.py +9 -0
- meta_subject/admin/blood_results/blood_results_fbc_admin.py +1 -1
- meta_subject/admin/blood_results/blood_results_hba1c_admin.py +1 -1
- meta_subject/admin/blood_results/blood_results_ins_admin.py +1 -1
- meta_subject/admin/blood_results/blood_results_lft_admin.py +1 -1
- meta_subject/admin/blood_results/blood_results_lipids_admin.py +1 -1
- meta_subject/admin/blood_results/blood_results_rft_admin.py +3 -5
- meta_subject/admin/complications_glycemia_admin.py +1 -1
- meta_subject/admin/delivery_admin.py +8 -11
- meta_subject/admin/diabetes/__init__.py +2 -0
- meta_subject/admin/diabetes/dm_endpoint_admin.py +2 -2
- meta_subject/admin/diabetes/dm_followup_admin.py +3 -2
- meta_subject/admin/egfr_drop_notification_admin.py +1 -1
- meta_subject/admin/fields.py +5 -5
- meta_subject/admin/fieldsets.py +5 -5
- meta_subject/admin/followup_examination_admin.py +11 -9
- meta_subject/admin/followup_vitals_admin.py +31 -6
- meta_subject/admin/glucose_admin.py +4 -8
- meta_subject/admin/glucose_fbg_admin.py +18 -11
- meta_subject/admin/health_economics/__init__.py +2 -0
- meta_subject/admin/health_economics/health_economics_simple_admin.py +1 -1
- meta_subject/admin/health_economics/health_economics_update_admin.py +1 -1
- meta_subject/admin/hepatitis_test_admin.py +1 -1
- meta_subject/admin/hiv_exit_review_admin.py +55 -0
- meta_subject/admin/list_filters.py +5 -5
- meta_subject/admin/mnsi_admin.py +7 -5
- meta_subject/admin/next_appointment_admin.py +19 -0
- meta_subject/admin/other_arv_regimens_admin.py +3 -3
- meta_subject/admin/patient_history_admin.py +4 -4
- meta_subject/admin/physical_exam_admin.py +1 -1
- meta_subject/admin/pregnancy_update_admin.py +1 -1
- meta_subject/admin/study_medication_admin.py +8 -15
- meta_subject/admin/subject_requisition_admin.py +2 -2
- meta_subject/admin/subject_visit_admin.py +1 -1
- meta_subject/admin/subject_visit_missed_admin.py +1 -1
- meta_subject/admin/urine_dipstick_test_admin.py +1 -1
- meta_subject/admin/urine_pregnancy_admin.py +1 -1
- meta_subject/baker_recipes.py +15 -15
- meta_subject/choices.py +4 -3
- meta_subject/form_validators/__init__.py +15 -0
- meta_subject/form_validators/delivery_form_validator.py +3 -3
- meta_subject/form_validators/dm_endpoint_form_validator.py +3 -1
- meta_subject/form_validators/dm_followup_form_validator.py +8 -7
- meta_subject/form_validators/egfr_drop_notification_form_validator.py +1 -1
- meta_subject/form_validators/followup_examination_form_validator.py +1 -1
- meta_subject/form_validators/glucose_fbg_form_validator.py +76 -0
- meta_subject/form_validators/glucose_form_validator.py +10 -67
- meta_subject/form_validators/hiv_exit_review_form_validator.py +18 -0
- meta_subject/form_validators/mixins.py +95 -0
- meta_subject/forms/__init__.py +44 -0
- meta_subject/forms/blood_results/__init__.py +9 -0
- meta_subject/forms/blood_results/blood_results_hba1c_form.py +1 -1
- meta_subject/forms/blood_results/blood_results_rft_form.py +60 -4
- meta_subject/forms/delivery_form.py +2 -0
- meta_subject/forms/diabetes/__init__.py +2 -0
- meta_subject/forms/diabetes/dm_followup_form.py +2 -2
- meta_subject/forms/followup_vitals_form.py +27 -1
- meta_subject/forms/glucose_fbg_form.py +1 -46
- meta_subject/forms/health_economics/__init__.py +2 -0
- meta_subject/forms/hepatitis_test_form.py +1 -1
- meta_subject/forms/hiv_exit_review_form.py +13 -0
- meta_subject/forms/mixins.py +1 -1
- meta_subject/forms/next_appointment_form.py +36 -0
- meta_subject/forms/other_arv_regimens_form.py +1 -1
- meta_subject/forms/patient_history_form.py +1 -1
- meta_subject/forms/physical_exam_form.py +1 -1
- meta_subject/forms/pregnancy_update_form.py +1 -1
- meta_subject/forms/slider_widget.py +1 -1
- meta_subject/forms/study_medication_form.py +18 -12
- meta_subject/forms/subject_requisition_form.py +1 -1
- meta_subject/forms/subject_visit_missed_form.py +1 -1
- meta_subject/forms/urine_dipstick_test_form.py +1 -1
- meta_subject/forms/urine_pregnancy_form.py +1 -1
- meta_subject/management/commands/create_missing_refills.py +3 -3
- meta_subject/management/commands/create_missing_rx.py +2 -2
- meta_subject/management/commands/missed.py +20 -23
- meta_subject/metadata_rules/__init__.py +2 -0
- meta_subject/metadata_rules/metadata_rules.py +14 -0
- meta_subject/metadata_rules/predicates.py +44 -25
- meta_subject/migrations/0001_initial.py +61 -61
- meta_subject/migrations/0002_auto_20191021_0353.py +5 -5
- meta_subject/migrations/0012_auto_20200118_2334.py +5 -5
- meta_subject/migrations/0014_auto_20200120_1622.py +5 -5
- meta_subject/migrations/0018_coronakap_historicalcoronakap.py +5 -5
- meta_subject/migrations/0033_auto_20200516_2356.py +5 -5
- meta_subject/migrations/0038_auto_20200520_0020.py +5 -5
- meta_subject/migrations/0040_auto_20200527_2155.py +1 -1
- meta_subject/migrations/0045_auto_20200530_1801.py +1 -1
- meta_subject/migrations/0051_auto_20200617_2117.py +5 -5
- meta_subject/migrations/0063_auto_20210715_0337.py +5 -5
- meta_subject/migrations/0066_auto_20210721_0335.py +9 -9
- meta_subject/migrations/0067_auto_20210726_0340.py +5 -5
- meta_subject/migrations/0068_auto_20210728_1809.py +5 -5
- meta_subject/migrations/0072_auto_20210805_1545.py +7 -7
- meta_subject/migrations/0073_auto_20210809_0055.py +5 -5
- meta_subject/migrations/0077_auto_20210809_2323.py +3 -3
- meta_subject/migrations/0082_auto_20210823_1612.py +3 -3
- meta_subject/migrations/0083_auto_20210823_1620.py +3 -3
- meta_subject/migrations/0088_auto_20210924_0027.py +5 -5
- meta_subject/migrations/0090_auto_20210924_0424.py +5 -5
- meta_subject/migrations/0093_auto_20211117_0352.py +5 -5
- meta_subject/migrations/0095_auto_20220128_1719.py +5 -5
- meta_subject/migrations/0098_auto_20220309_2106.py +5 -5
- meta_subject/migrations/0101_auto_20220316_2147.py +13 -13
- meta_subject/migrations/0107_auto_20220415_0043.py +1 -1
- meta_subject/migrations/0115_historicalegfrnotification_egfrnotification.py +5 -13
- meta_subject/migrations/0128_auto_20220720_0055.py +1 -1
- meta_subject/migrations/0131_auto_20220722_0411.py +1 -1
- meta_subject/migrations/0135_auto_20220722_2212.py +2 -1
- meta_subject/migrations/0164_dmreferralfollowup_historicaldmreferralfollowup.py +5 -5
- meta_subject/migrations/0172_remove_historicalbloodresultsglu_action_item_and_more.py +1 -2
- meta_subject/migrations/0177_alter_bloodresultslft_alp_value_and_more.py +1 -2
- meta_subject/migrations/0178_historicalhealtheconomicsupdate_and_more.py +5 -14
- meta_subject/migrations/0186_healtheconomicsupdate_singleton_field_and_more.py +1 -2
- meta_subject/migrations/0187_dmdiagnosis_historicaldmdiagnosis_dmdxresult_and_more.py +5 -14
- meta_subject/migrations/0188_historicaldmdxresult_dmdxresult.py +5 -14
- meta_subject/migrations/0199_auto_20240516_0247.py +1 -1
- meta_subject/migrations/0209_remove_historicaldmdxresult_dm_diagnosis_and_more.py +1 -2
- meta_subject/migrations/0212_auto_20240827_2222.py +1 -1
- meta_subject/migrations/0216_historicalnextappointment_nextappointment.py +553 -0
- meta_subject/migrations/0217_alter_historicalnextappointment_appt_datetime_and_more.py +42 -0
- meta_subject/migrations/0218_alter_historicalnextappointment_appt_date_and_more.py +53 -0
- meta_subject/migrations/0219_remove_historicalnextappointment_allow_create_interim_and_more.py +92 -0
- meta_subject/migrations/0220_historicalbloodresultsgludummy_bloodresultsgludummy.py +825 -0
- meta_subject/migrations/0221_auto_20250402_1913.py +42 -0
- meta_subject/migrations/0222_alter_historicalstudymedication_stock_codes_and_more.py +46 -0
- meta_subject/migrations/0223_bloodresultsfbc_errors_bloodresultsgludummy_errors_and_more.py +83 -0
- meta_subject/migrations/0224_bloodresultsfbc_abnormal_summary_and_more.py +153 -0
- meta_subject/migrations/0225_followupvitals_waist_circumference_and_more.py +46 -0
- meta_subject/migrations/0226_followupvitals_waist_circumference_comment_and_more.py +97 -0
- meta_subject/migrations/0227_alter_followupvitals_waist_circumference_comment_and_more.py +97 -0
- meta_subject/migrations/0228_bloodresultshba1c_hba1c_datetime_and_more.py +2518 -0
- meta_subject/migrations/0229_alter_glucosefbg_consent_model_and_more.py +1918 -0
- meta_subject/migrations/0230_alter_historicaldelivery_action_identifier_and_more.py +1733 -0
- meta_subject/migrations/0231_alter_historicalmedicationadherence_consent_model_and_more.py +2054 -0
- meta_subject/migrations/0232_alter_patienthistory_concomitant_conditions_and_more.py +1170 -0
- meta_subject/migrations/0233_historicalspfq_spfq.py +1066 -0
- meta_subject/migrations/0234_remove_spfq_site_remove_spfq_subject_visit_and_more.py +27 -0
- meta_subject/migrations/0235_glucosefbg_endpoint_today_and_more.py +606 -0
- meta_subject/migrations/0236_alter_historicalhivexitreview_other_current_arv_regimen_and_more.py +58 -0
- meta_subject/migrations/0237_historicalhivexitreview_singleton_field_and_more.py +68 -0
- meta_subject/migrations/0238_historicalhivexitreview_available_and_more.py +88 -0
- meta_subject/model_mixins/__init__.py +10 -0
- meta_subject/model_mixins/arv_history_model_mixin.py +3 -44
- meta_subject/model_mixins/arv_review_model_mixin.py +53 -0
- meta_subject/model_mixins/search_slug_model_mixin.py +1 -2
- meta_subject/model_mixins/vitals_fields_model_mixin.py +33 -0
- meta_subject/models/__init__.py +52 -0
- meta_subject/models/birth_outcomes.py +3 -3
- meta_subject/models/blood_results/__init__.py +11 -0
- meta_subject/models/blood_results/blood_results_glu.py +29 -0
- meta_subject/models/blood_results/blood_results_hba1c.py +0 -1
- meta_subject/models/blood_results/blood_results_ins.py +0 -1
- meta_subject/models/blood_results/blood_results_lft.py +0 -1
- meta_subject/models/delivery.py +4 -6
- meta_subject/models/diabetes/__init__.py +2 -0
- meta_subject/models/diabetes/dm_endpoint.py +5 -5
- meta_subject/models/diabetes/dm_followup.py +7 -8
- meta_subject/models/diet_and_lifestyle.py +2 -2
- meta_subject/models/followup_examination.py +12 -14
- meta_subject/models/glucose.py +5 -5
- meta_subject/models/glucose_fbg.py +17 -4
- meta_subject/models/health_economics/__init__.py +2 -0
- meta_subject/models/health_economics/health_economics.py +8 -8
- meta_subject/models/health_economics/health_economics_simple.py +2 -2
- meta_subject/models/health_economics/health_economics_update.py +3 -2
- meta_subject/models/hepatitis_test.py +2 -2
- meta_subject/models/hiv_exit_review.py +44 -0
- meta_subject/models/next_appointment.py +15 -0
- meta_subject/models/other_arv_regimens_detail.py +1 -1
- meta_subject/models/patient_history.py +6 -7
- meta_subject/models/physical_exam.py +2 -2
- meta_subject/models/pregnancy_update.py +1 -1
- meta_subject/models/signals.py +15 -13
- meta_subject/models/subject_visit.py +2 -2
- meta_subject/models/todo.txt +1 -1
- meta_subject/models/urine_dipstick_test.py +2 -2
- meta_subject/models/urine_pregnancy.py +1 -1
- meta_subject/static/meta_subject/slider.css +1 -1
- meta_subject/templates/meta_subject/endpoint_review_instructions.html +1 -1
- meta_subject/templates/meta_subject/widgets/slider.html +0 -1
- meta_visit_schedule/visit_schedules/__init__.py +2 -0
- meta_visit_schedule/visit_schedules/phase_three/__init__.py +2 -0
- meta_visit_schedule/visit_schedules/phase_three/crfs.py +34 -1
- meta_visit_schedule/visit_schedules/phase_three/schedule.py +4 -4
- meta_visit_schedule/visit_schedules/phase_three/schedule_dm_referral.py +1 -2
- meta_visit_schedule/visit_schedules/phase_three/schedule_pregnancy.py +2 -3
- meta_ae/tests/holidays.csv +0 -15
- meta_ae/tests/tests/test_actions.py +0 -127
- meta_ae/tests/urls.py +0 -10
- meta_analytics/dataframes/enrolled/__init__.py +0 -1
- meta_analytics/dataframes/enrolled/get_glucose_df.py +0 -122
- meta_analytics/tests/__init__.py +0 -0
- meta_analytics/tests/test_endpoints_by_date.py +0 -94
- meta_consent/tests/__init__.py +0 -0
- meta_consent/tests/holidays.csv +0 -15
- meta_consent/tests/tests/__init__.py +0 -0
- meta_consent/tests/tests/test_form_validators.py +0 -110
- meta_consent/tests/tests/test_subject_consent.py +0 -10
- meta_consent/tests/urls.py +0 -17
- meta_dashboard/templates/meta_dashboard/bootstrap3/subject/dashboard.html +0 -11
- meta_dashboard/tests/__init__.py +0 -0
- meta_dashboard/tests/admin.py +0 -22
- meta_dashboard/tests/holidays.csv +0 -15
- meta_dashboard/tests/tests/__init__.py +0 -0
- meta_dashboard/tests/urls.py +0 -55
- meta_edc/tests/__init__.py +0 -0
- meta_edc/tests/tests/__init__.py +0 -0
- meta_edc/tests/tests/test_endpoints.py +0 -554
- meta_edc-0.3.39.dist-info/AUTHORS +0 -0
- meta_edc-0.3.39.dist-info/METADATA +0 -766
- meta_edc-0.3.39.dist-info/WHEEL +0 -5
- meta_edc-0.3.39.dist-info/top_level.txt +0 -20
- meta_labs/tests/__init__.py +0 -0
- meta_labs/tests/test_labs.py +0 -27
- meta_labs/tests/test_reportables.py +0 -16
- meta_labs/tests/urls.py +0 -4
- meta_lists/tests/__init__.py +0 -0
- meta_lists/tests/test_lists.py +0 -8
- meta_pharmacy/admin/actions.py +0 -38
- meta_prn/tests/__init__.py +0 -0
- meta_prn/tests/tests/__init__.py +0 -0
- meta_prn/tests/tests/test_actions.py +0 -97
- meta_prn/tests/tests/test_dm_referral.py +0 -206
- meta_prn/tests/tests/test_manager_order.py +0 -14
- meta_prn/tests/tests/test_pregnancy_notification.py +0 -93
- meta_prn/tests/urls.py +0 -10
- meta_rando/tests/__init__.py +0 -0
- meta_rando/tests/tests/__init__.py +0 -0
- meta_rando/tests/tests/test_randomizers.py +0 -57
- meta_reports/tests/__init__.py +0 -0
- meta_reports/tests/test_reports.py +0 -35
- meta_reports/tests/test_sql_gen.py +0 -5
- meta_reports/tests/urls.py +0 -4
- meta_screening/offline_models.py +0 -3
- meta_screening/tests/__init__.py +0 -0
- meta_screening/tests/holidays.csv +0 -15
- meta_screening/tests/meta_test_case_mixin.py +0 -216
- meta_screening/tests/options.py +0 -127
- meta_screening/tests/tests/__init__.py +0 -0
- meta_screening/tests/tests/test_forms.py +0 -397
- meta_screening/tests/tests/test_screening_part_one.py +0 -108
- meta_screening/tests/tests/test_screening_part_three.py +0 -436
- meta_screening/tests/tests/test_screening_part_two.py +0 -84
- meta_sites/tests/__init__.py +0 -0
- meta_sites/tests/test_sites.py +0 -12
- meta_sites/tests/urls.py +0 -4
- meta_stats/__init__.py +0 -0
- meta_stats/incidence.py +0 -16
- meta_stats/models.py +0 -0
- meta_stats/tests/__init__.py +0 -0
- meta_stats/tests/tests/__init__.py +0 -0
- meta_stats/tests/tests/test_incidence.py +0 -10
- meta_subject/tests/__init__.py +0 -0
- meta_subject/tests/holidays.csv +0 -15
- meta_subject/tests/tests/__init__.py +0 -0
- meta_subject/tests/tests/test_egfr.py +0 -234
- meta_subject/tests/tests/test_fixes.py +0 -64
- meta_subject/tests/tests/test_followup.py +0 -52
- meta_subject/tests/tests/test_manager_order.py +0 -11
- meta_subject/tests/tests/test_medication_adherence.py +0 -75
- meta_subject/tests/tests/test_metadata_rules.py +0 -135
- meta_subject/tests/tests/test_mnsi.py +0 -317
- meta_subject/tests/tests/test_patient_history_form.py +0 -74
- meta_subject/tests/tests/test_physical_exam.py +0 -84
- meta_subject/tests/tests/test_sf12.py +0 -173
- meta_subject/tests/tests/test_study_medication.py +0 -230
- meta_subject/tests/urls.py +0 -24
- meta_visit_schedule/tests/__init__.py +0 -0
- meta_visit_schedule/tests/tests/__init__.py +0 -0
- meta_visit_schedule/tests/tests/test_schedule.py +0 -181
- meta_visit_schedule/tests/urls.py +0 -4
- tests/__init__.py +0 -0
- tests/etc/randomization_list.csv +0 -241
- tests/etc/randomization_list_phase_three.csv +0 -241
- tests/etc/user-aes-local.key +0 -0
- tests/etc/user-aes-restricted.key +0 -1
- tests/etc/user-rsa-local-private.pem +0 -27
- tests/etc/user-rsa-local-public.pem +0 -9
- tests/etc/user-rsa-restricted-private.pem +0 -27
- tests/etc/user-rsa-restricted-public.pem +0 -9
- tests/etc/user-salt-local.key +0 -0
- tests/etc/user-salt-restricted.key +0 -0
- tests/holidays.csv +0 -15
- tests/test_settings.py +0 -186
- /meta_ae/templates/meta_ae/{bootstrap3/ae_initial_description.html → aeinitial_description.html} +0 -0
- /meta_dashboard/templates/meta_dashboard/{bootstrap3/buttons → buttons}/add_consent_button.html +0 -0
- /meta_dashboard/templates/meta_dashboard/{bootstrap3/buttons → buttons}/dashboard_button.html +0 -0
- /meta_dashboard/templates/meta_dashboard/{bootstrap3/buttons → buttons}/refusal_button.html +0 -0
- /meta_dashboard/templates/meta_dashboard/{bootstrap3/screening → screening}/listboard.html +0 -0
- /meta_dashboard/templates/meta_dashboard/{bootstrap3/subject → subject}/listboard.html +0 -0
- {meta_edc-0.3.39.dist-info → meta_edc-1.4.0.dist-info/licenses}/LICENSE +0 -0
- /meta_ae/tests/__init__.py → /meta_subject/management/__init__py.py +0 -0
- /meta_ae/tests/tests/__init__.py → /meta_subject/management/commands/__init__py.py +0 -0
meta_subject/admin/mnsi_admin.py
CHANGED
|
@@ -28,11 +28,13 @@ def get_fieldsets():
|
|
|
28
28
|
},
|
|
29
29
|
)
|
|
30
30
|
|
|
31
|
-
|
|
32
|
-
|
|
33
|
-
|
|
34
|
-
|
|
35
|
-
|
|
31
|
+
return (
|
|
32
|
+
fieldset,
|
|
33
|
+
*get_mnsi_fieldsets(),
|
|
34
|
+
crf_status_fieldset_tuple,
|
|
35
|
+
calculated_values_fieldset,
|
|
36
|
+
audit_fieldset_tuple,
|
|
37
|
+
)
|
|
36
38
|
|
|
37
39
|
|
|
38
40
|
edc_mnsi_admin.unregister(DefaultMnsi)
|
|
@@ -0,0 +1,19 @@
|
|
|
1
|
+
from __future__ import annotations
|
|
2
|
+
|
|
3
|
+
from django.contrib import admin
|
|
4
|
+
from edc_appointment.modeladmin_mixins import NextAppointmentCrfModelAdminMixin
|
|
5
|
+
from edc_model_admin.history import SimpleHistoryAdmin
|
|
6
|
+
|
|
7
|
+
from ..admin_site import meta_subject_admin
|
|
8
|
+
from ..forms import NextAppointmentForm
|
|
9
|
+
from ..models import NextAppointment
|
|
10
|
+
from .modeladmin import CrfModelAdminMixin
|
|
11
|
+
|
|
12
|
+
__all__ = ["NextAppointmentAdmin"]
|
|
13
|
+
|
|
14
|
+
|
|
15
|
+
@admin.register(NextAppointment, site=meta_subject_admin)
|
|
16
|
+
class NextAppointmentAdmin(
|
|
17
|
+
CrfModelAdminMixin, NextAppointmentCrfModelAdminMixin, SimpleHistoryAdmin
|
|
18
|
+
):
|
|
19
|
+
form = NextAppointmentForm
|
|
@@ -15,7 +15,7 @@ class OtherArvRegimensInlineAdmin(TabularInlineMixin, admin.TabularInline):
|
|
|
15
15
|
form = OtherArvRegimensDetailForm
|
|
16
16
|
extra = 1
|
|
17
17
|
view_on_site = False
|
|
18
|
-
autocomplete_fields =
|
|
18
|
+
autocomplete_fields = ("arv_regimen",)
|
|
19
19
|
|
|
20
20
|
fieldsets = (
|
|
21
21
|
(
|
|
@@ -40,7 +40,7 @@ class OtherArvRegimensInlineAdmin(TabularInlineMixin, admin.TabularInline):
|
|
|
40
40
|
class OtherArvRegimensAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
|
|
41
41
|
form = OtherArvRegimensForm
|
|
42
42
|
|
|
43
|
-
inlines =
|
|
43
|
+
inlines = (OtherArvRegimensInlineAdmin,)
|
|
44
44
|
|
|
45
45
|
fieldsets = (
|
|
46
46
|
(None, {"fields": ("subject_visit", "report_datetime", "has_other_regimens")}),
|
|
@@ -48,6 +48,6 @@ class OtherArvRegimensAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
|
|
|
48
48
|
audit_fieldset_tuple,
|
|
49
49
|
)
|
|
50
50
|
|
|
51
|
-
radio_fields = {
|
|
51
|
+
radio_fields = { # noqa: RUF012
|
|
52
52
|
"has_other_regimens": admin.VERTICAL,
|
|
53
53
|
}
|
|
@@ -14,8 +14,8 @@ from .modeladmin import CrfModelAdminMixin
|
|
|
14
14
|
class PatientHistoryAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
|
|
15
15
|
form = PatientHistoryForm
|
|
16
16
|
|
|
17
|
-
autocomplete_fields =
|
|
18
|
-
fieldsets =
|
|
17
|
+
autocomplete_fields = ("current_arv_regimen", "previous_arv_regimen")
|
|
18
|
+
fieldsets = (
|
|
19
19
|
(None, {"fields": ("subject_visit", "report_datetime")}),
|
|
20
20
|
("Part 1: Symptoms", {"fields": ("symptoms", "other_symptoms")}),
|
|
21
21
|
get_hiv_fieldset(part="2"),
|
|
@@ -23,9 +23,9 @@ class PatientHistoryAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
|
|
|
23
23
|
get_other_history_fieldset(part="4"),
|
|
24
24
|
crf_status_fieldset,
|
|
25
25
|
audit_fieldset_tuple,
|
|
26
|
-
|
|
26
|
+
)
|
|
27
27
|
|
|
28
|
-
radio_fields = {
|
|
28
|
+
radio_fields = { # noqa: RUF012
|
|
29
29
|
"current_arv_regimen": admin.VERTICAL,
|
|
30
30
|
"current_smoker": admin.VERTICAL,
|
|
31
31
|
"dm_in_family": admin.VERTICAL,
|
|
@@ -52,7 +52,7 @@ class PhysicalExamAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
|
|
|
52
52
|
audit_fieldset_tuple,
|
|
53
53
|
)
|
|
54
54
|
|
|
55
|
-
radio_fields = {
|
|
55
|
+
radio_fields = { # noqa: RUF012
|
|
56
56
|
"abdominal_tenderness": admin.VERTICAL,
|
|
57
57
|
"enlarged_liver": admin.VERTICAL,
|
|
58
58
|
"irregular_heartbeat": admin.VERTICAL,
|
|
@@ -1,7 +1,6 @@
|
|
|
1
1
|
from __future__ import annotations
|
|
2
2
|
|
|
3
3
|
from decimal import Decimal
|
|
4
|
-
from typing import Type
|
|
5
4
|
|
|
6
5
|
from django.contrib import admin, messages
|
|
7
6
|
from django.contrib.admin import SimpleListFilter
|
|
@@ -30,15 +29,14 @@ from .modeladmin import CrfModelAdminMixin
|
|
|
30
29
|
|
|
31
30
|
@admin.register(StudyMedication, site=meta_subject_admin)
|
|
32
31
|
class StudyMedicationAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
|
|
33
|
-
|
|
34
|
-
actions = ["create_or_update_rx_refills"]
|
|
32
|
+
actions = ("create_or_update_rx_refills",)
|
|
35
33
|
|
|
36
34
|
form = StudyMedicationForm
|
|
37
35
|
|
|
38
|
-
autocomplete_fields =
|
|
36
|
+
autocomplete_fields = (
|
|
39
37
|
"dosage_guideline",
|
|
40
38
|
"formulation",
|
|
41
|
-
|
|
39
|
+
)
|
|
42
40
|
|
|
43
41
|
fieldsets = (
|
|
44
42
|
(
|
|
@@ -78,20 +76,19 @@ class StudyMedicationAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
|
|
|
78
76
|
audit_fieldset_tuple,
|
|
79
77
|
)
|
|
80
78
|
|
|
81
|
-
radio_fields = {
|
|
79
|
+
radio_fields = { # noqa: RUF012
|
|
82
80
|
"formulation": admin.VERTICAL,
|
|
83
81
|
"refill": admin.VERTICAL,
|
|
84
82
|
"refill_to_next_visit": admin.VERTICAL,
|
|
85
83
|
}
|
|
86
84
|
|
|
87
|
-
def get_list_filter(self, request) -> tuple[str |
|
|
85
|
+
def get_list_filter(self, request) -> tuple[str | type[SimpleListFilter], ...]:
|
|
88
86
|
list_filter = super().get_list_filter(request)
|
|
89
87
|
list_filter = list(list_filter)
|
|
90
88
|
list_filter.insert(4, "dosage_guideline")
|
|
91
89
|
list_filter.insert(4, RefillEndDateListFilter)
|
|
92
90
|
list_filter.insert(4, RefillStartDateListFilter)
|
|
93
|
-
|
|
94
|
-
return list_filter
|
|
91
|
+
return tuple(list_filter)
|
|
95
92
|
|
|
96
93
|
def get_list_display(self, request) -> tuple[str, ...]:
|
|
97
94
|
list_display = super().get_list_display(request)
|
|
@@ -100,8 +97,7 @@ class StudyMedicationAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
|
|
|
100
97
|
list_display.insert(4, "refill_end_date")
|
|
101
98
|
list_display.insert(4, "refill_start_date")
|
|
102
99
|
list_display.insert(4, "dosage_guideline")
|
|
103
|
-
|
|
104
|
-
return list_display
|
|
100
|
+
return tuple(list_display)
|
|
105
101
|
|
|
106
102
|
@admin.display(description="days", ordering="number_of_days")
|
|
107
103
|
def refill_days(self, obj):
|
|
@@ -156,10 +152,7 @@ class StudyMedicationAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
|
|
|
156
152
|
messages.add_message(
|
|
157
153
|
request,
|
|
158
154
|
ERROR,
|
|
159
|
-
(
|
|
160
|
-
f"ObjectDoesNotExist: {obj.subject_identifier}, "
|
|
161
|
-
f"{obj.related_visit}, {str(e)}"
|
|
162
|
-
),
|
|
155
|
+
(f"ObjectDoesNotExist: {obj.subject_identifier}, {obj.related_visit}, {e!s}"),
|
|
163
156
|
)
|
|
164
157
|
errors += 1
|
|
165
158
|
except StudyMedicationError as e:
|
|
@@ -1,8 +1,8 @@
|
|
|
1
1
|
from urllib.parse import parse_qs, urlsplit
|
|
2
2
|
|
|
3
|
+
from clinicedc_constants import YES
|
|
3
4
|
from django.contrib import admin
|
|
4
5
|
from django_audit_fields.admin import audit_fieldset_tuple
|
|
5
|
-
from edc_constants.constants import YES
|
|
6
6
|
from edc_lab.admin import (
|
|
7
7
|
RequisitionAdminMixin,
|
|
8
8
|
requisition_fieldset,
|
|
@@ -31,7 +31,7 @@ class SubjectRequisitionAdmin(RequisitionAdminMixin, CrfModelAdminMixin, SimpleH
|
|
|
31
31
|
audit_fieldset_tuple,
|
|
32
32
|
)
|
|
33
33
|
|
|
34
|
-
radio_fields = {
|
|
34
|
+
radio_fields = { # noqa: RUF012
|
|
35
35
|
"is_drawn": admin.VERTICAL,
|
|
36
36
|
"reason_not_drawn": admin.VERTICAL,
|
|
37
37
|
"item_type": admin.VERTICAL,
|
meta_subject/baker_recipes.py
CHANGED
|
@@ -1,5 +1,5 @@
|
|
|
1
|
-
from
|
|
2
|
-
from
|
|
1
|
+
from clinicedc_constants import NO, NOT_APPLICABLE, NULL_STRING, PATIENT, POS, YES
|
|
2
|
+
from django.utils import timezone
|
|
3
3
|
from edc_visit_tracking.constants import SCHEDULED
|
|
4
4
|
from faker import Faker
|
|
5
5
|
from model_bakery.recipe import Recipe
|
|
@@ -26,22 +26,22 @@ subjectrequisition = Recipe(SubjectRequisition)
|
|
|
26
26
|
|
|
27
27
|
medicationadherence = Recipe(
|
|
28
28
|
MedicationAdherence,
|
|
29
|
-
report_datetime=
|
|
29
|
+
report_datetime=timezone.now(),
|
|
30
30
|
visual_score_slider=90,
|
|
31
31
|
visual_score_confirmed=90,
|
|
32
32
|
last_missed_pill=NO,
|
|
33
33
|
pill_count_performed=YES,
|
|
34
34
|
pill_count=3,
|
|
35
35
|
missed_pill_reason=[],
|
|
36
|
-
other_missed_pill_reason=
|
|
36
|
+
other_missed_pill_reason=NULL_STRING,
|
|
37
37
|
)
|
|
38
38
|
|
|
39
39
|
urinepregnancy = Recipe(
|
|
40
40
|
UrinePregnancy,
|
|
41
|
-
action_identifier=
|
|
42
|
-
report_datetime=
|
|
41
|
+
action_identifier=NULL_STRING,
|
|
42
|
+
report_datetime=timezone.now(),
|
|
43
43
|
performed=YES,
|
|
44
|
-
not_performed_reason=
|
|
44
|
+
not_performed_reason=NULL_STRING,
|
|
45
45
|
bhcg_value=POS,
|
|
46
46
|
notified=False,
|
|
47
47
|
notified_datetime=None,
|
|
@@ -79,16 +79,16 @@ followupexamination = Recipe(
|
|
|
79
79
|
delivery = Recipe(
|
|
80
80
|
Delivery,
|
|
81
81
|
# site=None,
|
|
82
|
-
action_identifier=
|
|
83
|
-
report_datetime=
|
|
82
|
+
action_identifier=NULL_STRING,
|
|
83
|
+
report_datetime=timezone.now(),
|
|
84
84
|
info_available=YES,
|
|
85
85
|
info_source=PATIENT,
|
|
86
86
|
informant_relation=NOT_APPLICABLE,
|
|
87
|
-
informant_relation_other=
|
|
88
|
-
delivery_datetime=
|
|
87
|
+
informant_relation_other=NULL_STRING,
|
|
88
|
+
delivery_datetime=timezone.now(),
|
|
89
89
|
delivery_time_estimated=NO,
|
|
90
90
|
delivery_location=HOSPITAL_CLINIC,
|
|
91
|
-
delivery_location_other=
|
|
91
|
+
delivery_location_other=NULL_STRING,
|
|
92
92
|
delivery_location_name="Big hospital",
|
|
93
93
|
delivery_ga=40,
|
|
94
94
|
gm_treated=NO,
|
|
@@ -98,8 +98,8 @@ delivery = Recipe(
|
|
|
98
98
|
birthoutcomes = Recipe(
|
|
99
99
|
BirthOutcomes,
|
|
100
100
|
delivery=None,
|
|
101
|
-
action_identifier=
|
|
102
|
-
report_datetime=
|
|
101
|
+
action_identifier=NULL_STRING,
|
|
102
|
+
report_datetime=timezone.now(),
|
|
103
103
|
birth_order=1,
|
|
104
104
|
birth_outcome=LIVE_AT_TERM,
|
|
105
105
|
birth_weight=320,
|
|
@@ -107,5 +107,5 @@ birthoutcomes = Recipe(
|
|
|
107
107
|
|
|
108
108
|
healtheconomicsupdate = Recipe(
|
|
109
109
|
HealthEconomicsUpdate,
|
|
110
|
-
report_datetime=
|
|
110
|
+
report_datetime=timezone.now(),
|
|
111
111
|
)
|
meta_subject/choices.py
CHANGED
|
@@ -1,8 +1,9 @@
|
|
|
1
|
-
from
|
|
2
|
-
from edc_constants.constants import (
|
|
1
|
+
from clinicedc_constants import (
|
|
3
2
|
ABSENT,
|
|
4
3
|
CLOSED,
|
|
5
4
|
DEAD,
|
|
5
|
+
GRADE3,
|
|
6
|
+
GRADE4,
|
|
6
7
|
NEW,
|
|
7
8
|
NO,
|
|
8
9
|
NO_EXAM,
|
|
@@ -15,7 +16,7 @@ from edc_constants.constants import (
|
|
|
15
16
|
PRESENT_WITH_REINFORCEMENT,
|
|
16
17
|
YES,
|
|
17
18
|
)
|
|
18
|
-
from
|
|
19
|
+
from django.utils.translation import gettext_lazy as _
|
|
19
20
|
from edc_visit_tracking.constants import MISSED_VISIT, SCHEDULED, UNSCHEDULED
|
|
20
21
|
|
|
21
22
|
from meta_ae.choices import INFORMANT_RELATIONSHIP
|
|
@@ -4,5 +4,20 @@ from .dm_endpoint_form_validator import DmEndpointFormValidator
|
|
|
4
4
|
from .dm_followup_form_validator import DmFollowupFormValidator
|
|
5
5
|
from .egfr_drop_notification_form_validator import EgfrDropNotificationFormValidator
|
|
6
6
|
from .followup_examination_form_validator import FollowupExaminationFormValidator
|
|
7
|
+
from .glucose_fbg_form_validator import GlucoseFbgFormValidator
|
|
7
8
|
from .glucose_form_validator import GlucoseFormValidator
|
|
8
9
|
from .health_economics_form_validator import HealthEconomicsFormValidator
|
|
10
|
+
from .hiv_exit_review_form_validator import HivExitReviewFormValidator
|
|
11
|
+
|
|
12
|
+
__all__ = [
|
|
13
|
+
"BirthOutcomesFormValidator",
|
|
14
|
+
"DeliveryFormValidator",
|
|
15
|
+
"DmEndpointFormValidator",
|
|
16
|
+
"DmFollowupFormValidator",
|
|
17
|
+
"EgfrDropNotificationFormValidator",
|
|
18
|
+
"FollowupExaminationFormValidator",
|
|
19
|
+
"GlucoseFbgFormValidator",
|
|
20
|
+
"GlucoseFormValidator",
|
|
21
|
+
"HealthEconomicsFormValidator",
|
|
22
|
+
"HivExitReviewFormValidator",
|
|
23
|
+
]
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
+
from clinicedc_constants import NO, OTHER
|
|
1
2
|
from django import forms
|
|
2
3
|
from django.core.exceptions import ObjectDoesNotExist
|
|
3
|
-
from edc_constants.constants import NO, OTHER
|
|
4
4
|
from edc_crf.crf_form_validator import CrfFormValidator
|
|
5
5
|
from edc_form_validators import INVALID_ERROR
|
|
6
6
|
from edc_utils import formatted_date
|
|
@@ -15,10 +15,10 @@ class DeliveryFormValidator(CrfFormValidator):
|
|
|
15
15
|
pregnancy_notification = PregnancyNotification.objects.get(
|
|
16
16
|
subject_identifier=self.cleaned_data.get("subject_visit").subject_identifier
|
|
17
17
|
)
|
|
18
|
-
except ObjectDoesNotExist:
|
|
18
|
+
except ObjectDoesNotExist as e:
|
|
19
19
|
raise forms.ValidationError(
|
|
20
20
|
f"{PregnancyNotification._meta.verbose_name} not found."
|
|
21
|
-
)
|
|
21
|
+
) from e
|
|
22
22
|
|
|
23
23
|
self.required_if(
|
|
24
24
|
NO, field="info_available", field_required="info_not_available_reason"
|
|
@@ -2,6 +2,7 @@ from django.core.exceptions import ObjectDoesNotExist
|
|
|
2
2
|
from django.template.loader import render_to_string
|
|
3
3
|
from django.urls import reverse
|
|
4
4
|
from django.utils.html import format_html
|
|
5
|
+
from django.utils.safestring import mark_safe
|
|
5
6
|
from edc_crf.crf_form_validator import CrfFormValidator
|
|
6
7
|
from edc_form_validators import INVALID_ERROR
|
|
7
8
|
|
|
@@ -28,7 +29,8 @@ class DmEndpointFormValidator(CrfFormValidator):
|
|
|
28
29
|
self.raise_validation_error(
|
|
29
30
|
{
|
|
30
31
|
"__all__": format_html(
|
|
31
|
-
|
|
32
|
+
"Subject has not reached the protocol endpoint. See {link}",
|
|
33
|
+
link=mark_safe(link), # noqa: S308
|
|
32
34
|
)
|
|
33
35
|
},
|
|
34
36
|
INVALID_ERROR,
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
+
from clinicedc_constants import NO, OTHER, YES
|
|
1
2
|
from django import forms
|
|
2
3
|
from django.core.exceptions import ObjectDoesNotExist
|
|
3
|
-
from edc_constants.constants import NO, OTHER, YES
|
|
4
4
|
from edc_crf.crf_form_validator import CrfFormValidator
|
|
5
5
|
from edc_form_validators import INVALID_ERROR
|
|
6
6
|
from edc_utils import formatted_date
|
|
@@ -11,7 +11,6 @@ from meta_prn.models import DmReferral
|
|
|
11
11
|
|
|
12
12
|
class DmFollowupFormValidator(CrfFormValidator):
|
|
13
13
|
def clean(self):
|
|
14
|
-
|
|
15
14
|
# referral_date must be before report datetime
|
|
16
15
|
if (
|
|
17
16
|
self.report_datetime
|
|
@@ -228,8 +227,10 @@ class DmFollowupFormValidator(CrfFormValidator):
|
|
|
228
227
|
and self.cleaned_data.get("on_dm_medications") == YES
|
|
229
228
|
):
|
|
230
229
|
confirmed = self.cleaned_data.get("visual_score_confirmed")
|
|
231
|
-
if
|
|
232
|
-
|
|
233
|
-
|
|
234
|
-
|
|
235
|
-
|
|
230
|
+
if (
|
|
231
|
+
confirmed is not None
|
|
232
|
+
and int(self.cleaned_data.get("visual_score_slider", "0")) != confirmed
|
|
233
|
+
):
|
|
234
|
+
raise forms.ValidationError(
|
|
235
|
+
{"visual_score_confirmed": "Does not match visual score above."}
|
|
236
|
+
)
|
|
@@ -0,0 +1,76 @@
|
|
|
1
|
+
from decimal import Decimal
|
|
2
|
+
|
|
3
|
+
from clinicedc_constants import MILLIMOLES_PER_LITER, NO, PENDING, YES
|
|
4
|
+
from clinicedc_utils import convert_units
|
|
5
|
+
from edc_crf.crf_form_validator import CrfFormValidator
|
|
6
|
+
from edc_form_validators import INVALID_ERROR
|
|
7
|
+
from edc_glucose.utils import validate_glucose_as_millimoles_per_liter
|
|
8
|
+
|
|
9
|
+
from meta_reports.models import GlucoseSummary
|
|
10
|
+
|
|
11
|
+
from .mixins import EndpointValidatorMixin, RepeatFbgDateValidatorMixin
|
|
12
|
+
|
|
13
|
+
|
|
14
|
+
class GlucoseFbgFormValidator(
|
|
15
|
+
EndpointValidatorMixin, RepeatFbgDateValidatorMixin, CrfFormValidator
|
|
16
|
+
):
|
|
17
|
+
def clean(self):
|
|
18
|
+
self.required_if(YES, field="fasting", field_required="fasting_duration_str")
|
|
19
|
+
self.required_if(NO, field="fbg_performed", field_required="fbg_not_performed_reason")
|
|
20
|
+
self.required_if(YES, field="fbg_performed", field_required="fbg_datetime")
|
|
21
|
+
if self.cleaned_data.get("fbg_datetime") and self.cleaned_data.get(
|
|
22
|
+
"fbg_datetime"
|
|
23
|
+
) < self.cleaned_data.get("report_datetime"):
|
|
24
|
+
self.raise_validation_error(
|
|
25
|
+
{"fbg_datetime": "Invalid. Must be on or after report date above"},
|
|
26
|
+
INVALID_ERROR,
|
|
27
|
+
)
|
|
28
|
+
self.required_if(YES, field="fbg_performed", field_required="fbg_value")
|
|
29
|
+
|
|
30
|
+
self.applicable_if(YES, field="fbg_performed", field_applicable="fbg_units")
|
|
31
|
+
|
|
32
|
+
# endpoint
|
|
33
|
+
self.applicable_if(YES, field="fbg_performed", field_applicable="endpoint_today")
|
|
34
|
+
self.validate_endpoint_fields()
|
|
35
|
+
|
|
36
|
+
# repeat_fbg_date
|
|
37
|
+
self.required_if(PENDING, field="endpoint_today", field_required="repeat_fbg_date")
|
|
38
|
+
self.validate_repeat_fbg_date()
|
|
39
|
+
|
|
40
|
+
@property
|
|
41
|
+
def converted_fbg_value(self):
|
|
42
|
+
if self.cleaned_data.get("fbg_value") is not None:
|
|
43
|
+
return validate_glucose_as_millimoles_per_liter("fbg", self.cleaned_data)
|
|
44
|
+
return None
|
|
45
|
+
|
|
46
|
+
def is_endpoint(self):
|
|
47
|
+
value = NO
|
|
48
|
+
if self.converted_fbg_value and self.converted_fbg_value >= Decimal("7.0"):
|
|
49
|
+
# is there a previous FBG>=7.0 in sequence or do you need to repeat?
|
|
50
|
+
previous_obj = (
|
|
51
|
+
GlucoseSummary.objects.filter(
|
|
52
|
+
subject_identifier=self.subject_identifier,
|
|
53
|
+
fbg_datetime__lt=self.cleaned_data.get("fbg_datetime"),
|
|
54
|
+
)
|
|
55
|
+
.order_by("fbg_datetime")
|
|
56
|
+
.last()
|
|
57
|
+
)
|
|
58
|
+
previous_fbg_value = convert_units(
|
|
59
|
+
label="fbg",
|
|
60
|
+
value=float(previous_obj.fbg_value),
|
|
61
|
+
units_from=previous_obj.fbg_units,
|
|
62
|
+
units_to=MILLIMOLES_PER_LITER,
|
|
63
|
+
)
|
|
64
|
+
previous_ogtt_value = convert_units(
|
|
65
|
+
label="ogtt",
|
|
66
|
+
value=float(previous_obj.ogtt_value),
|
|
67
|
+
units_from=previous_obj.ogtt_units,
|
|
68
|
+
units_to=MILLIMOLES_PER_LITER,
|
|
69
|
+
)
|
|
70
|
+
|
|
71
|
+
if previous_obj and previous_fbg_value >= 7.0 and previous_ogtt_value <= 11.1:
|
|
72
|
+
value = YES
|
|
73
|
+
else:
|
|
74
|
+
# you need to schedule a repeat
|
|
75
|
+
value = PENDING
|
|
76
|
+
return value
|
|
@@ -1,14 +1,17 @@
|
|
|
1
|
-
from
|
|
2
|
-
|
|
3
|
-
from edc_constants.constants import NO, PENDING, YES
|
|
1
|
+
from clinicedc_constants import PENDING
|
|
4
2
|
from edc_crf.crf_form_validator import CrfFormValidator
|
|
5
|
-
from edc_form_validators import INVALID_ERROR
|
|
6
3
|
from edc_glucose.form_validators import FbgOgttFormValidatorMixin
|
|
7
4
|
|
|
8
5
|
from ..constants import AMENDMENT_DATE
|
|
6
|
+
from .mixins import EndpointValidatorMixin, RepeatFbgDateValidatorMixin
|
|
9
7
|
|
|
10
8
|
|
|
11
|
-
class GlucoseFormValidator(
|
|
9
|
+
class GlucoseFormValidator(
|
|
10
|
+
EndpointValidatorMixin,
|
|
11
|
+
RepeatFbgDateValidatorMixin,
|
|
12
|
+
FbgOgttFormValidatorMixin,
|
|
13
|
+
CrfFormValidator,
|
|
14
|
+
):
|
|
12
15
|
def clean(self):
|
|
13
16
|
self.validate_glucose_testing_matrix()
|
|
14
17
|
has_results = (
|
|
@@ -18,66 +21,6 @@ class GlucoseFormValidator(FbgOgttFormValidatorMixin, CrfFormValidator):
|
|
|
18
21
|
)
|
|
19
22
|
self.applicable_if_true(has_results, field_applicable="endpoint_today")
|
|
20
23
|
if has_results:
|
|
21
|
-
|
|
22
|
-
if is_endpoint == YES and self.cleaned_data.get("endpoint_today") != YES:
|
|
23
|
-
self.raise_validation_error(
|
|
24
|
-
{
|
|
25
|
-
"endpoint_today": (
|
|
26
|
-
"Participant has reached a study endpoint today. Expected YES"
|
|
27
|
-
)
|
|
28
|
-
},
|
|
29
|
-
INVALID_ERROR,
|
|
30
|
-
)
|
|
31
|
-
elif is_endpoint == PENDING and self.cleaned_data.get("endpoint_today") != PENDING:
|
|
32
|
-
self.raise_validation_error(
|
|
33
|
-
{
|
|
34
|
-
"endpoint_today": (
|
|
35
|
-
"Participant has not reached a study endpoint today. "
|
|
36
|
-
"Expected to repeat FBG"
|
|
37
|
-
)
|
|
38
|
-
},
|
|
39
|
-
INVALID_ERROR,
|
|
40
|
-
)
|
|
41
|
-
|
|
42
|
-
elif is_endpoint == NO and self.cleaned_data.get("endpoint_today") != NO:
|
|
43
|
-
self.raise_validation_error(
|
|
44
|
-
{"endpoint_today": "Participant has not reached a study endpoint today"},
|
|
45
|
-
INVALID_ERROR,
|
|
46
|
-
)
|
|
47
|
-
|
|
24
|
+
self.validate_endpoint_fields()
|
|
48
25
|
self.required_if(PENDING, field="endpoint_today", field_required="repeat_fbg_date")
|
|
49
|
-
|
|
50
|
-
delta = (
|
|
51
|
-
self.cleaned_data.get("repeat_fbg_date")
|
|
52
|
-
- self.cleaned_data.get("fbg_datetime").date()
|
|
53
|
-
)
|
|
54
|
-
if delta.days < 7:
|
|
55
|
-
self.raise_validation_error(
|
|
56
|
-
{"repeat_fbg_date": "Must be at least 7 days from the FBG date above"},
|
|
57
|
-
INVALID_ERROR,
|
|
58
|
-
)
|
|
59
|
-
if delta.days > 10:
|
|
60
|
-
self.raise_validation_error(
|
|
61
|
-
{
|
|
62
|
-
"repeat_fbg_date": (
|
|
63
|
-
"Must be no more than 10 days from the FBG date above"
|
|
64
|
-
)
|
|
65
|
-
},
|
|
66
|
-
INVALID_ERROR,
|
|
67
|
-
)
|
|
68
|
-
|
|
69
|
-
def is_endpoint(self):
|
|
70
|
-
value = NO
|
|
71
|
-
if self.cleaned_data.get("fbg_value") >= Decimal("7.0") and self.cleaned_data.get(
|
|
72
|
-
"ogtt_value"
|
|
73
|
-
) >= Decimal("11.1"):
|
|
74
|
-
value = YES
|
|
75
|
-
elif self.cleaned_data.get("fbg_value") < Decimal("7.0") and self.cleaned_data.get(
|
|
76
|
-
"ogtt_value"
|
|
77
|
-
) >= Decimal("11.1"):
|
|
78
|
-
value = YES
|
|
79
|
-
elif self.cleaned_data.get("fbg_value") >= Decimal("7.0") and self.cleaned_data.get(
|
|
80
|
-
"ogtt_value"
|
|
81
|
-
) < Decimal("11.1"):
|
|
82
|
-
value = PENDING
|
|
83
|
-
return value
|
|
26
|
+
self.validate_repeat_fbg_date()
|
|
@@ -0,0 +1,18 @@
|
|
|
1
|
+
from clinicedc_constants import NO, OTHER
|
|
2
|
+
from edc_crf.crf_form_validator import CrfFormValidator
|
|
3
|
+
|
|
4
|
+
|
|
5
|
+
class HivExitReviewFormValidator(CrfFormValidator):
|
|
6
|
+
def clean(self):
|
|
7
|
+
self.required_if(NO, field="available", field_required="not_available_reason")
|
|
8
|
+
self.required_if_not_none(
|
|
9
|
+
"viral_load", "viral_load_date", field_required_evaluate_as_int=True
|
|
10
|
+
)
|
|
11
|
+
|
|
12
|
+
self.required_if_not_none("cd4", "cd4_date", field_required_evaluate_as_int=True)
|
|
13
|
+
|
|
14
|
+
self.required_if(
|
|
15
|
+
OTHER,
|
|
16
|
+
field="current_arv_regimen",
|
|
17
|
+
field_required="other_current_arv_regimen",
|
|
18
|
+
)
|