meta-edc 0.3.15__py3-none-any.whl → 0.3.50__py3-none-any.whl
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- meta_ae/action_items.py +2 -2
- meta_ae/migrations/0017_auto_20221130_2257.py +12 -7
- meta_ae/tests/holidays.csv +1 -1
- meta_analytics/README.rst +17 -0
- meta_analytics/dataframes/__init__.py +19 -0
- meta_analytics/dataframes/constants.py +33 -0
- meta_analytics/dataframes/enrolled/__init__.py +1 -0
- meta_analytics/dataframes/enrolled/get_glucose_df.py +122 -0
- meta_analytics/dataframes/get_eos_df.py +26 -0
- meta_analytics/dataframes/get_last_imp_visits_df.py +101 -0
- meta_analytics/dataframes/glucose_endpoints/__init__.py +2 -0
- meta_analytics/dataframes/glucose_endpoints/endpoint_by_date.py +183 -0
- meta_analytics/dataframes/glucose_endpoints/glucose_endpoints_by_date.py +531 -0
- meta_analytics/dataframes/screening/__init__.py +2 -0
- meta_analytics/dataframes/screening/get_glucose_tested_only_df.py +20 -0
- meta_analytics/dataframes/screening/get_screening_df.py +163 -0
- meta_analytics/dataframes/utils.py +65 -0
- meta_analytics/get_tables.py +81 -0
- meta_analytics/tables/__init__.py +2 -0
- meta_analytics/tables/eligible.py +106 -0
- meta_analytics/tables/enrolled/__init__.py +0 -0
- meta_analytics/tables/enrolled/glucose.py +28 -0
- meta_analytics/tables/has_dm.py +61 -0
- meta_analytics/tests/__init__.py +0 -0
- meta_analytics/tests/test_endpoints_by_date.py +94 -0
- meta_auth/auth_objects.py +22 -0
- meta_auth/auths.py +18 -3
- meta_consent/action_items.py +18 -1
- meta_consent/admin/__init__.py +1 -0
- meta_consent/admin/subject_consent_v1_ext_admin.py +45 -0
- meta_consent/baker_recipes.py +1 -0
- meta_consent/consents.py +20 -1
- meta_consent/constants.py +1 -0
- meta_consent/forms/__init__.py +1 -0
- meta_consent/forms/subject_consent_v1_ext_form.py +16 -0
- meta_consent/locale/lg/LC_MESSAGES/django.po +69 -0
- meta_consent/locale/sw/LC_MESSAGES/django.po +12 -12
- meta_consent/migrations/0026_historicalsubjectconsentv1ext_subjectconsentv1ext.py +544 -0
- meta_consent/migrations/0027_auto_20250111_0344.py +30 -0
- meta_consent/models/__init__.py +1 -0
- meta_consent/models/signals.py +18 -0
- meta_consent/models/subject_consent_v1_ext.py +29 -0
- meta_consent/tests/holidays.csv +1 -1
- meta_dashboard/locale/lg/LC_MESSAGES/django.po +30 -0
- meta_dashboard/locale/sw/LC_MESSAGES/django.po +11 -2
- meta_dashboard/navbars.py +3 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/buttons/eligibility_button.html +1 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/buttons/screening_button.html +1 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/subject/dashboard/sidebar.html +24 -0
- meta_dashboard/templates/meta_dashboard/bootstrap3/subject/dashboard.html +3 -0
- meta_dashboard/templatetags/meta_dashboard_extras.py +1 -1
- meta_dashboard/tests/holidays.csv +1 -1
- meta_dashboard/tests/urls.py +0 -1
- meta_dashboard/view_utils/__init__.py +6 -0
- meta_dashboard/view_utils/subject_screening_button.py +2 -2
- meta_dashboard/views/subject/dashboard/dashboard_view.py +38 -0
- meta_edc/__init__.py +7 -0
- meta_edc/celery.py +4 -13
- meta_edc/celery_live.py +18 -0
- meta_edc/celery_uat.py +24 -0
- meta_edc/management/commands/update_forms_reference.py +6 -2
- meta_edc/migrations/__init__.py +0 -0
- meta_edc/navbars.py +2 -1
- meta_edc/settings/debug.py +10 -2
- meta_edc/settings/defaults.py +58 -43
- meta_edc/templates/meta_edc/bootstrap3/home.html +5 -2
- meta_edc/tests/tests/test_endpoints.py +2 -0
- meta_edc/urls.py +4 -1
- meta_edc/wsgi.py +1 -1
- meta_edc/wsgi_live.py +1 -1
- meta_edc/wsgi_uat.py +1 -1
- meta_edc-0.3.50.dist-info/AUTHORS +0 -0
- meta_edc-0.3.50.dist-info/METADATA +766 -0
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/RECORD +316 -127
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/WHEEL +1 -1
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/top_level.txt +1 -0
- meta_pharmacy/admin/__init__.py +2 -0
- meta_pharmacy/admin/rx_admin.py +75 -0
- meta_pharmacy/admin/substitutions_admin.py +67 -0
- meta_pharmacy/admin_site.py +9 -0
- meta_pharmacy/apps.py +5 -0
- meta_pharmacy/constants.py +10 -0
- meta_pharmacy/forms/__init__.py +2 -0
- meta_pharmacy/forms/rx_form.py +16 -0
- meta_pharmacy/forms/substitutions_form.py +54 -0
- meta_pharmacy/label_configs.py +30 -0
- meta_pharmacy/labels/__init__.py +5 -0
- meta_pharmacy/labels/draw_label_for_subject_with_barcode.py +62 -0
- meta_pharmacy/labels/draw_label_for_subject_with_code128.py +14 -0
- meta_pharmacy/labels/draw_label_with_test_data.py +26 -0
- meta_pharmacy/labels/label_data.py +14 -0
- meta_pharmacy/labels/print_sheets.py +97 -0
- meta_pharmacy/list_data.py +8 -0
- meta_pharmacy/management/__init__.py +0 -0
- meta_pharmacy/management/commands/__init__.py +0 -0
- meta_pharmacy/management/commands/update_initial_pharmacy_data.py +10 -0
- meta_pharmacy/migrations/0002_initial.py +695 -0
- meta_pharmacy/migrations/0003_auto_20240909_2335.py +64 -0
- meta_pharmacy/migrations/0004_alter_historicalsubstitutions_report_datetime_and_more.py +23 -0
- meta_pharmacy/migrations/0005_auto_20240911_0352.py +17 -0
- meta_pharmacy/migrations/0006_lotnumber_label.py +289 -0
- meta_pharmacy/migrations/0007_lotnumber_medication.py +24 -0
- meta_pharmacy/migrations/0008_remove_lotnumber_medication_and_more.py +390 -0
- meta_pharmacy/migrations/0009_remove_historicalrx_slug.py +17 -0
- meta_pharmacy/models/__init__.py +3 -0
- meta_pharmacy/models/label_data.py +38 -0
- meta_pharmacy/models/rx.py +18 -0
- meta_pharmacy/models/rx_label.py +39 -0
- meta_pharmacy/models/substitutions.py +88 -0
- meta_pharmacy/urls.py +8 -0
- meta_pharmacy/utils/__init__.py +1 -0
- meta_pharmacy/utils/update_initial_pharmacy_data.py +146 -0
- meta_prn/action_items.py +9 -1
- meta_prn/admin/pregnancy_notification_admin.py +6 -2
- meta_prn/migrations/0034_auto_20220630_1110.py +3 -3
- meta_prn/migrations/0035_auto_20220630_1140.py +59 -56
- meta_prn/tests/tests/test_dm_referral.py +3 -6
- meta_reports/__init__.py +1 -0
- meta_reports/admin/__init__.py +15 -0
- meta_reports/admin/dbviews/__init__.py +14 -0
- meta_reports/admin/dbviews/glucose_summary_admin.py +116 -0
- meta_reports/admin/dbviews/imp_substitutions_admin.py +101 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/__init__.py +2 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/note_model_admin.py +53 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/unmanaged_model_admin.py +84 -0
- meta_reports/admin/dbviews/on_study_missing_lab_values_admin/__init__.py +1 -0
- meta_reports/admin/dbviews/on_study_missing_lab_values_admin/unmanaged_model_admin.py +13 -0
- meta_reports/admin/dbviews/on_study_missing_values_admin/__init__.py +1 -0
- meta_reports/admin/dbviews/on_study_missing_values_admin/unmanaged_model_admin.py +13 -0
- meta_reports/admin/dbviews/patient_history_missing_baseline_cd4_admin.py +58 -0
- meta_reports/admin/dbviews/unattended_three_in_row2_admin.py +47 -0
- meta_reports/admin/dbviews/unattended_three_in_row_admin.py +35 -0
- meta_reports/admin/dbviews/unattended_two_in_row_admin.py +34 -0
- meta_reports/admin/endpoints_admin.py +14 -0
- meta_reports/admin/endpoints_all_admin.py +13 -0
- meta_reports/admin/last_imp_refill_admin.py +181 -0
- meta_reports/admin/list_filters.py +30 -0
- meta_reports/admin/modeladmin_mixins.py +112 -0
- meta_reports/admin_site.py +5 -0
- meta_reports/apps.py +1 -16
- meta_reports/forms/__init__.py +1 -0
- meta_reports/forms/missing_ogtt_note_form.py +33 -0
- meta_reports/management/__init__.py +0 -0
- meta_reports/management/commands/__init__.py +0 -0
- meta_reports/management/commands/generate_endpoints.py +13 -0
- meta_reports/migrations/0001_initial.py +87 -0
- meta_reports/migrations/0002_patienthistorymissingbaselinecd4_and_more.py +64 -0
- meta_reports/migrations/0003_auto_20240618_0505.py +12 -0
- meta_reports/migrations/0004_alter_patienthistorymissingbaselinecd4_table.py +17 -0
- meta_reports/migrations/0005_endpoints.py +47 -0
- meta_reports/migrations/0006_endpoints_baseline_datetime.py +18 -0
- meta_reports/migrations/0007_alter_endpoints_endpoint_label_and_more.py +43 -0
- meta_reports/migrations/0008_alter_endpoints_endpoint_label.py +18 -0
- meta_reports/migrations/0009_alter_endpoints_options.py +21 -0
- meta_reports/migrations/0010_alter_patienthistorymissingbaselinecd4_options_and_more.py +49 -0
- meta_reports/migrations/0011_auto_20240813_0156.py +54 -0
- meta_reports/migrations/0012_auto_20240813_1516.py +48 -0
- meta_reports/migrations/0013_auto_20240813_1516.py +48 -0
- meta_reports/migrations/0014_auto_20240813_1517.py +48 -0
- meta_reports/migrations/0015_alter_endpoints_site.py +22 -0
- meta_reports/migrations/0016_missingscreeningogtt.py +47 -0
- meta_reports/migrations/0017_auto_20240819_1711.py +166 -0
- meta_reports/migrations/0018_auto_20240819_1713.py +54 -0
- meta_reports/migrations/0019_auto_20240819_1721.py +54 -0
- meta_reports/migrations/0020_auto_20240819_1811.py +54 -0
- meta_reports/migrations/0021_auto_20240819_1817.py +54 -0
- meta_reports/migrations/0022_auto_20240819_1832.py +54 -0
- meta_reports/migrations/0023_endpoints_meta_report_subject_a56b22_idx.py +20 -0
- meta_reports/migrations/0024_glucosesummary.py +38 -0
- meta_reports/migrations/0025_auto_20240822_0115.py +87 -0
- meta_reports/migrations/0026_auto_20240822_0120.py +54 -0
- meta_reports/migrations/0027_auto_20240822_0140.py +54 -0
- meta_reports/migrations/0028_alter_glucosesummary_options.py +22 -0
- meta_reports/migrations/0029_auto_20240822_0149.py +54 -0
- meta_reports/migrations/0030_auto_20240822_1637.py +54 -0
- meta_reports/migrations/0031_endpointsproxy.py +25 -0
- meta_reports/migrations/0032_alter_endpointsproxy_options.py +21 -0
- meta_reports/migrations/0033_auto_20240823_0012.py +54 -0
- meta_reports/migrations/0034_auto_20240823_1642.py +54 -0
- meta_reports/migrations/0035_historicalmissingogttnote_missingogttnote.py +457 -0
- meta_reports/migrations/0036_historicalmissingogttnote_fasting_and_more.py +86 -0
- meta_reports/migrations/0037_historicalmissingogttnote_result_status_and_more.py +51 -0
- meta_reports/migrations/0038_alter_historicalmissingogttnote_fasting_and_more.py +33 -0
- meta_reports/migrations/0039_onstudymissingvalues.py +44 -0
- meta_reports/migrations/0040_auto_20240824_0412.py +282 -0
- meta_reports/migrations/0041_auto_20240828_2229.py +14 -0
- meta_reports/migrations/0042_onstudymissinglabvalues.py +43 -0
- meta_reports/migrations/0043_auto_20240828_2309.py +88 -0
- meta_reports/migrations/0044_auto_20240828_2323.py +93 -0
- meta_reports/migrations/0045_auto_20240829_0248.py +54 -0
- meta_reports/migrations/0046_auto_20240829_0250.py +54 -0
- meta_reports/migrations/0047_impsubstitutions.py +56 -0
- meta_reports/migrations/0048_auto_20240909_2338.py +48 -0
- meta_reports/migrations/0049_auto_20240911_0327.py +54 -0
- meta_reports/migrations/0050_alter_endpoints_created.py +19 -0
- meta_reports/migrations/0051_remove_endpoints_baseline_datetime_and_more.py +40 -0
- meta_reports/migrations/0052_lastimpvisit.py +57 -0
- meta_reports/migrations/0053_rename_lastimpvisit_lastimprefill_and_more.py +31 -0
- meta_reports/models/__init__.py +16 -0
- meta_reports/models/dbviews/README +14 -0
- meta_reports/models/dbviews/__init__.py +9 -0
- meta_reports/models/dbviews/glucose_summary/__init__.py +2 -0
- meta_reports/models/dbviews/glucose_summary/unmanaged_model.py +35 -0
- meta_reports/models/dbviews/glucose_summary/view_definition.py +28 -0
- meta_reports/models/dbviews/imp_substitutions/__init__.py +1 -0
- meta_reports/models/dbviews/imp_substitutions/unmanaged_model.py +41 -0
- meta_reports/models/dbviews/imp_substitutions/view_definition.py +21 -0
- meta_reports/models/dbviews/missing_screening_ogtt/__init__.py +2 -0
- meta_reports/models/dbviews/missing_screening_ogtt/note_model.py +57 -0
- meta_reports/models/dbviews/missing_screening_ogtt/unmanaged_model.py +41 -0
- meta_reports/models/dbviews/missing_screening_ogtt/view_definition.py +20 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/__init__.py +1 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/qa_cases.py +53 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/unmanged_model.py +20 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/view_definition.py +17 -0
- meta_reports/models/dbviews/on_study_missing_values/__init__.py +1 -0
- meta_reports/models/dbviews/on_study_missing_values/qa_cases.py +54 -0
- meta_reports/models/dbviews/on_study_missing_values/unmanged_model.py +20 -0
- meta_reports/models/dbviews/on_study_missing_values/view_definition.py +17 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/__init__.py +1 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/unmanaged_model.py +31 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/view_definition.py +21 -0
- meta_reports/models/dbviews/unattended_three_in_row/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_three_in_row/unmanaged_model.py +29 -0
- meta_reports/models/dbviews/unattended_three_in_row/view_definition.py +31 -0
- meta_reports/models/dbviews/unattended_three_in_row2/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_three_in_row2/unmanaged_model.py +29 -0
- meta_reports/models/dbviews/unattended_three_in_row2/view_definition.py +50 -0
- meta_reports/models/dbviews/unattended_two_in_row/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_two_in_row/unmanaged_model.py +27 -0
- meta_reports/models/dbviews/unattended_two_in_row/view_definition.py +30 -0
- meta_reports/models/endpoints.py +31 -0
- meta_reports/models/endpoints_proxy.py +11 -0
- meta_reports/models/last_imp_refill.py +34 -0
- meta_reports/tasks.py +12 -0
- meta_reports/templates/meta_reports/columns/subject_identifier_column.html +1 -0
- meta_reports/templates/meta_reports/endpoints_all_change_list_note.html +12 -0
- meta_reports/templates/meta_reports/endpoints_change_list_note.html +12 -0
- meta_reports/tests/test_sql_gen.py +5 -0
- meta_reports/urls.py +8 -0
- meta_reports/utils.py +0 -0
- meta_screening/admin/subject_screening_admin.py +1 -0
- meta_screening/migrations/0067_alter_historicalscreeningpartone_report_datetime_and_more.py +84 -0
- meta_screening/tests/holidays.csv +1 -1
- meta_screening/tests/meta_test_case_mixin.py +15 -0
- meta_sites/tests/test_sites.py +1 -1
- meta_subject/action_items.py +2 -2
- meta_subject/admin/__init__.py +2 -1
- meta_subject/admin/birth_outcome_admin.py +2 -0
- meta_subject/admin/blood_results/__init__.py +1 -1
- meta_subject/admin/blood_results/{blood_results_lipid_admin.py → blood_results_lipids_admin.py} +7 -7
- meta_subject/admin/diabetes/__init__.py +1 -1
- meta_subject/admin/diabetes/dm_endpoint_admin.py +35 -0
- meta_subject/admin/glucose_fbg_admin.py +4 -0
- meta_subject/admin/other_arv_regimens_admin.py +2 -0
- meta_subject/admin/study_medication_admin.py +10 -0
- meta_subject/form_validators/__init__.py +1 -1
- meta_subject/form_validators/dm_endpoint_form_validator.py +35 -0
- meta_subject/forms/__init__.py +2 -2
- meta_subject/forms/blood_results/__init__.py +1 -1
- meta_subject/forms/blood_results/{blood_results_lipid_form.py → blood_results_lipids_form.py} +5 -5
- meta_subject/forms/diabetes/__init__.py +1 -2
- meta_subject/forms/diabetes/dm_endpoint_form.py +13 -0
- meta_subject/forms/study_medication_form.py +35 -0
- meta_subject/locale/lg/LC_MESSAGES/django.po +470 -0
- meta_subject/locale/sw/LC_MESSAGES/django.po +191 -89
- meta_subject/metadata_rules/metadata_rules.py +7 -0
- meta_subject/metadata_rules/predicates.py +45 -8
- meta_subject/migrations/0107_auto_20220415_0043.py +28 -22
- meta_subject/migrations/0126_auto_20220719_2142.py +4 -4
- meta_subject/migrations/0131_auto_20220722_0411.py +28 -23
- meta_subject/migrations/0132_auto_20220722_1825.py +10 -6
- meta_subject/migrations/0135_auto_20220722_2212.py +39 -35
- meta_subject/migrations/0150_auto_20220914_0039.py +15 -11
- meta_subject/migrations/0207_alter_historicalphysicalexam_waist_circumference_and_more.py +46 -0
- meta_subject/migrations/0208_birthoutcomes_crf_status_and_more.py +62 -0
- meta_subject/migrations/0209_remove_historicaldmdxresult_dm_diagnosis_and_more.py +37 -0
- meta_subject/migrations/0210_remove_dmdxresult_dm_diagnosis_and_more.py +123 -0
- meta_subject/migrations/0211_dmendpoint_endpoint_reached_and_more.py +45 -0
- meta_subject/migrations/0212_auto_20240827_2222.py +23 -0
- meta_subject/migrations/0213_rename_bloodresultslipid_bloodresultslipids_and_more.py +35 -0
- meta_subject/migrations/0214_historicalstudymedication_stock_codes_and_more.py +44 -0
- meta_subject/migrations/0215_alter_historicalstudymedication_stock_codes_and_more.py +46 -0
- meta_subject/model_mixins/arv_history_model_mixin.py +3 -3
- meta_subject/models/__init__.py +3 -2
- meta_subject/models/birth_outcomes.py +6 -1
- meta_subject/models/blood_results/__init__.py +1 -1
- meta_subject/models/blood_results/{blood_results_lipid.py → blood_results_lipids.py} +3 -3
- meta_subject/models/diabetes/__init__.py +1 -2
- meta_subject/models/diabetes/dm_endpoint.py +61 -0
- meta_subject/models/glucose.py +4 -1
- meta_subject/models/physical_exam.py +1 -0
- meta_subject/models/signals.py +19 -0
- meta_subject/models/todo.txt +1 -1
- meta_subject/static/meta_subject/slider.css +1 -1
- meta_subject/templates/meta_subject/endpoint_review_instructions.html +1 -1
- meta_subject/templates/meta_subject/widgets/slider.html +0 -1
- meta_subject/tests/holidays.csv +1 -1
- meta_subject/tests/tests/test_medication_adherence.py +5 -1
- meta_subject/tests/tests/test_metadata_rules.py +2 -2
- meta_subject/tests/tests/test_mnsi.py +212 -121
- meta_subject/tests/tests/test_sf12.py +0 -12
- meta_visit_schedule/constants.py +4 -0
- meta_visit_schedule/tests/tests/test_schedule.py +4 -0
- meta_visit_schedule/visit_schedules/phase_three/crfs.py +75 -13
- meta_visit_schedule/visit_schedules/phase_three/requisitions.py +12 -0
- meta_visit_schedule/visit_schedules/phase_three/schedule.py +65 -2
- meta_visit_schedule/visit_schedules/phase_three/schedule_dm_referral.py +1 -1
- tests/etc/randomization_list.csv +1 -1
- {meta_edc/tests → tests}/etc/randomization_list_phase_three.csv +4 -4
- tests/holidays.csv +1 -1
- {meta_edc/tests → tests}/test_settings.py +16 -6
- meta_edc/tests/etc/user-aes-local.key +0 -1
- meta_edc/tests/etc/user-aes-restricted.key +0 -0
- meta_edc/tests/etc/user-rsa-local-private.pem +0 -27
- meta_edc/tests/etc/user-rsa-local-public.pem +0 -9
- meta_edc/tests/etc/user-rsa-restricted-private.pem +0 -27
- meta_edc/tests/etc/user-rsa-restricted-public.pem +0 -9
- meta_edc/tests/etc/user-salt-local.key +0 -0
- meta_edc/tests/etc/user-salt-restricted.key +0 -0
- meta_edc-0.3.15.dist-info/METADATA +0 -88
- meta_reports/tests/holidays.csv +0 -15
- meta_subject/admin/diabetes/dm_diagnosis_admin.py +0 -89
- meta_subject/form_validators/dm_diagnosis_form_validator.py +0 -38
- meta_subject/form_validators/dm_dx_result_form_validator.py +0 -7
- meta_subject/forms/diabetes/dm_diagnosis_form.py +0 -13
- meta_subject/forms/diabetes/dm_dx_result_form.py +0 -11
- meta_subject/models/diabetes/dm_diagnosis.py +0 -50
- meta_subject/models/diabetes/dm_dx_result.py +0 -70
- /meta_edc-0.3.15.dist-info/AUTHORS → /meta_analytics/__init__.py +0 -0
- /meta_pharmacy/models.py → /meta_analytics/constants.py +0 -0
- /meta_reports/models.py → /meta_analytics/notebooks/cleaning/__init__.py +0 -0
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/LICENSE +0 -0
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# Generated by Django 5.0.8 on 2024-08-23 14:26
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import django.core.validators
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from django.db import migrations, models
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class Migration(migrations.Migration):
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dependencies = [
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("meta_reports", "0035_historicalmissingogttnote_missingogttnote"),
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]
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operations = [
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migrations.AddField(
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model_name="historicalmissingogttnote",
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name="fasting",
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field=models.CharField(
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choices=[("Yes", "Yes"), ("No", "No")],
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max_length=15,
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null=True,
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verbose_name="Did the participant fast?",
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),
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),
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migrations.AddField(
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model_name="historicalmissingogttnote",
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name="fasting_duration_delta",
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field=models.DurationField(
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blank=True,
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help_text="system calculated to microseconds. (hours=microseconds/3.6e+9)",
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null=True,
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),
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),
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migrations.AddField(
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model_name="historicalmissingogttnote",
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name="fasting_duration_str",
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field=models.CharField(
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blank=True,
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help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
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max_length=8,
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null=True,
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validators=[
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django.core.validators.RegexValidator(
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"^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
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message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
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)
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],
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verbose_name="How long have they fasted in hours and/or minutes?",
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),
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),
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migrations.AddField(
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model_name="missingogttnote",
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name="fasting",
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field=models.CharField(
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choices=[("Yes", "Yes"), ("No", "No")],
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max_length=15,
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null=True,
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verbose_name="Did the participant fast?",
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),
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),
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migrations.AddField(
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model_name="missingogttnote",
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name="fasting_duration_delta",
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field=models.DurationField(
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blank=True,
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help_text="system calculated to microseconds. (hours=microseconds/3.6e+9)",
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null=True,
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),
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),
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migrations.AddField(
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model_name="missingogttnote",
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name="fasting_duration_str",
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field=models.CharField(
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blank=True,
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help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
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max_length=8,
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null=True,
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validators=[
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django.core.validators.RegexValidator(
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"^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
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message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
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)
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],
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verbose_name="How long have they fasted in hours and/or minutes?",
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),
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),
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]
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# Generated by Django 5.0.8 on 2024-08-23 14:40
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from django.db import migrations, models
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class Migration(migrations.Migration):
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dependencies = [
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("meta_reports", "0036_historicalmissingogttnote_fasting_and_more"),
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]
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operations = [
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migrations.AddField(
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model_name="historicalmissingogttnote",
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name="result_status",
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field=models.CharField(
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choices=[("Yes", "Yes"), ("No", "No")],
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default="Yes",
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max_length=25,
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verbose_name="Is the OGTT result available",
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),
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),
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migrations.AddField(
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model_name="missingogttnote",
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name="result_status",
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field=models.CharField(
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choices=[("Yes", "Yes"), ("No", "No")],
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default="Yes",
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max_length=25,
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verbose_name="Is the OGTT result available",
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),
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),
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migrations.AlterField(
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model_name="historicalmissingogttnote",
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name="status",
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field=models.CharField(
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choices=[("COMPLETE", "Complete"), ("not_available", "Not available")],
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default="done",
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max_length=25,
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),
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),
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migrations.AlterField(
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model_name="missingogttnote",
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name="status",
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field=models.CharField(
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choices=[("COMPLETE", "Complete"), ("not_available", "Not available")],
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default="done",
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max_length=25,
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),
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),
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]
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# Generated by Django 5.0.8 on 2024-08-23 15:06
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from django.db import migrations, models
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class Migration(migrations.Migration):
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dependencies = [
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("meta_reports", "0037_historicalmissingogttnote_result_status_and_more"),
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]
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operations = [
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migrations.AlterField(
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model_name="historicalmissingogttnote",
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name="fasting",
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field=models.CharField(
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choices=[("Yes", "Yes"), ("No", "No"), ("N/A", "Not applicable")],
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default="N/A",
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max_length=15,
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verbose_name="Did the participant fast?",
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),
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),
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migrations.AlterField(
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model_name="missingogttnote",
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name="fasting",
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field=models.CharField(
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choices=[("Yes", "Yes"), ("No", "No"), ("N/A", "Not applicable")],
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default="N/A",
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max_length=15,
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verbose_name="Did the participant fast?",
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),
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),
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]
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@@ -0,0 +1,44 @@
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# Generated by Django 5.0.8 on 2024-08-23 18:58
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from django.db import migrations, models
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class Migration(migrations.Migration):
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dependencies = [
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("meta_reports", "0038_alter_historicalmissingogttnote_fasting_and_more"),
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]
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operations = [
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migrations.CreateModel(
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name="OnstudyMissingValues",
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fields=[
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(
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"id",
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models.BigAutoField(
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auto_created=True, primary_key=True, serialize=False, verbose_name="ID"
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),
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),
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("report_model", models.CharField(max_length=50)),
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("subject_identifier", models.CharField(max_length=25)),
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("created", models.DateTimeField()),
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("dbtable", models.CharField(max_length=150, null=True)),
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("subject_visit_id", models.UUIDField(null=True)),
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("report_datetime", models.DateTimeField(null=True)),
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("label", models.CharField(max_length=50, null=True)),
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("visit_code", models.CharField(max_length=25, null=True)),
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("visit_code_sequence", models.IntegerField(null=True)),
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("schedule_name", models.CharField(max_length=25, null=True)),
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("user_created", models.CharField(max_length=25, null=True)),
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("user_modified", models.CharField(max_length=25, null=True)),
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("modified", models.DateTimeField(null=True)),
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],
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options={
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"verbose_name": "Missing values for on-study patient",
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"verbose_name_plural": "Missing values for on-study patients",
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"db_table": "onstudy_missing_values_view",
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"managed": False,
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"default_permissions": ("view", "export", "viewallsites"),
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},
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),
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]
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# Generated by Django 5.0.8 on 2024-08-24 01:12
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import django_db_views.migration_functions
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import django_db_views.operations
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from django.db import migrations
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class Migration(migrations.Migration):
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dependencies = [
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("meta_reports", "0039_onstudymissingvalues"),
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]
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operations = [
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"select *, uuid() as id, now() as `created`, 'meta_reports.glucose_summary_view' as `report_model` from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS `ogtt_value`, NULL AS `ogtt_datetime`, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS `fasted`, fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS `fasted`, fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
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"glucose_summary_view",
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engine="django.db.backends.mysql",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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'# noqa\nselect *, uuid() as id, now() as created, \'meta_reports.glucose_summary_view\' as report_model\nfrom (\n select v.subject_identifier, fbg_value, fbg_datetime, null as \'ogtt_value\', null as \'ogtt_datetime\',\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as \'fasted\',\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime\n from meta_subject_glucosefbg as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n left join meta_prn_endofstudy as eos on v.subject_identifier=eos.subject_identifier\n UNION\n select v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as \'fasted\',\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime\n from meta_subject_glucose as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n left join meta_prn_endofstudy as eos on v.subject_identifier=eos.subject_identifier\n) as A\norder by subject_identifier, fbg_datetime',
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"glucose_summary_view",
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engine="django.db.backends.mysql",
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),
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atomic=False,
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),
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"select *, get_random_uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS \"ogtt_value\", NULL AS \"ogtt_datetime\", CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
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"glucose_summary_view",
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engine="django.db.backends.postgresql",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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'# noqa\nselect *, get_random_uuid() as id, now() as created, \'meta_reports.glucose_summary_view\' as report_model\nfrom (\n select v.subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as fasted,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime\n from meta_subject_glucosefbg as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n left join meta_prn_endofstudy as eos on v.subject_identifier=eos.subject_identifier\n UNION\n select v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as fasted,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime\n from meta_subject_glucose as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n left join meta_prn_endofstudy as eos on v.subject_identifier=eos.subject_identifier\n) as A\norder by subject_identifier, fbg_datetime',
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"glucose_summary_view",
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engine="django.db.backends.postgresql",
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),
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atomic=False,
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),
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"select *, uuid() as id, datetime() as created, 'meta_reports.glucose_summary_view' as report_model from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS \"ogtt_value\", NULL AS \"ogtt_datetime\", CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
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"glucose_summary_view",
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engine="django.db.backends.sqlite3",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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'# noqa\nSELECT *, lower(\n hex(randomblob(4)) || \'-\' || hex(randomblob(2)) || \'-\' || \'4\' ||\n substr(hex( randomblob(2)), 2) || \'-\' ||\n substr(\'AB89\', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || \'-\' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`, \'meta_reports.glucose_summary_view\' as report_model\nfrom (\n select v.subject_identifier, fbg_value, fbg_datetime, null as ogtt_value, null as ogtt_datetime,\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as fasted,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime\n from meta_subject_glucosefbg as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n left join meta_prn_endofstudy as eos on v.subject_identifier=eos.subject_identifier\n UNION\n select v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime,\n case when fasting="fasting" then "Yes" when fasting="non_fasting" then "No" else fasting end as fasted,\n fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime\n from meta_subject_glucose as fbg\n left join meta_subject_subjectvisit as v on v.id=fbg.subject_visit_id\n left join meta_prn_endofstudy as eos on v.subject_identifier=eos.subject_identifier \n ) as A\norder by subject_identifier, fbg_datetime',
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"glucose_summary_view",
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engine="django.db.backends.sqlite3",
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51
|
+
),
|
52
|
+
atomic=False,
|
53
|
+
),
|
54
|
+
django_db_views.operations.ViewRunPython(
|
55
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
56
|
+
"select *, uuid() as id, now() as `created`, 'meta_reports.missing_screening_ogtt_view' as `report_model` from (SELECT screening_identifier, site_id, report_datetime AS `screening_datetime`, fbg_datetime, converted_fbg_value AS `fbg_value`, converted_ogtt_value AS `ogtt_value`, fbg2_value, ogtt2_value, repeat_glucose_performed AS `repeated`, p3_ltfu, fbg2_datetime, ogtt2_datetime, consented, screening_identifier AS `subject_identifier`, id AS `original_id` FROM meta_screening_subjectscreening WHERE NOT converted_fbg_value IS NULL AND converted_ogtt_value IS NULL AND unsuitable_agreed <> 'Yes') as A ORDER BY subject_identifier, site_id",
|
57
|
+
"missing_screening_ogtt_view",
|
58
|
+
engine="django.db.backends.mysql",
|
59
|
+
),
|
60
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
61
|
+
"# noqa\n select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented,\n screening_identifier as subject_identifier, id as original_id\n from meta_screening_subjectscreening\n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
62
|
+
"missing_screening_ogtt_view",
|
63
|
+
engine="django.db.backends.mysql",
|
64
|
+
),
|
65
|
+
atomic=False,
|
66
|
+
),
|
67
|
+
django_db_views.operations.ViewRunPython(
|
68
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
69
|
+
'select *, get_random_uuid() as id, now() as created, \'meta_reports.missing_screening_ogtt_view\' as report_model from (SELECT screening_identifier, site_id, report_datetime AS "screening_datetime", fbg_datetime, converted_fbg_value AS "fbg_value", converted_ogtt_value AS "ogtt_value", fbg2_value, ogtt2_value, repeat_glucose_performed AS "repeated", p3_ltfu, fbg2_datetime, ogtt2_datetime, consented, screening_identifier AS "subject_identifier", id AS "original_id" FROM meta_screening_subjectscreening WHERE NOT converted_fbg_value IS NULL AND converted_ogtt_value IS NULL AND unsuitable_agreed <> \'Yes\') as A ORDER BY subject_identifier, site_id',
|
70
|
+
"missing_screening_ogtt_view",
|
71
|
+
engine="django.db.backends.postgresql",
|
72
|
+
),
|
73
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
74
|
+
"# noqa\n select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, repeat_glucose_performed as repeated,\n p3_ltfu, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented,\n screening_identifier as subject_identifier, id as original_id\n from meta_screening_subjectscreening\n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
75
|
+
"missing_screening_ogtt_view",
|
76
|
+
engine="django.db.backends.postgresql",
|
77
|
+
),
|
78
|
+
atomic=False,
|
79
|
+
),
|
80
|
+
django_db_views.operations.ViewRunPython(
|
81
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
82
|
+
'select *, uuid() as id, datetime() as created, \'meta_reports.missing_screening_ogtt_view\' as report_model from (SELECT screening_identifier, site_id, report_datetime AS "screening_datetime", fbg_datetime, converted_fbg_value AS "fbg_value", converted_ogtt_value AS "ogtt_value", fbg2_value, ogtt2_value, repeat_glucose_performed AS "repeated", p3_ltfu, fbg2_datetime, ogtt2_datetime, consented, screening_identifier AS "subject_identifier", id AS "original_id" FROM meta_screening_subjectscreening WHERE NOT converted_fbg_value IS NULL AND converted_ogtt_value IS NULL AND unsuitable_agreed <> \'Yes\') as A ORDER BY subject_identifier, site_id',
|
83
|
+
"missing_screening_ogtt_view",
|
84
|
+
engine="django.db.backends.sqlite3",
|
85
|
+
),
|
86
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
87
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value,\n repeat_glucose_performed as repeated, p3_ltfu, fbg2_datetime, ogtt2_datetime, consented,\n screening_identifier as subject_identifier, id as original_id\n from meta_screening_subjectscreening\n where converted_fbg_value is not null and converted_ogtt_value is null and unsuitable_agreed != \"Yes\"\n ) as A\n order by screening_identifier",
|
88
|
+
"missing_screening_ogtt_view",
|
89
|
+
engine="django.db.backends.sqlite3",
|
90
|
+
),
|
91
|
+
atomic=False,
|
92
|
+
),
|
93
|
+
django_db_views.operations.ViewRunPython(
|
94
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
95
|
+
"select *, uuid() as id, now() as `created`, 'onstudy_missing_values_view' as `report_model` from (SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No HIV Diagnosis date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.hiv_diagnosis_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4 IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date but previous ARV is YES' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.has_previous_arv_regimen = 'YES' AND crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'Other current ARV regimen missing' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id LEFT JOIN meta_lists_arvregimens AS arvregimen ON crf.current_arv_regimen_id = arvregimen.id WHERE crf.other_current_arv_regimen IS NULL AND arvregimen.name = 'OTHER' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified) as A ORDER BY subject_identifier, site_id",
|
96
|
+
"onstudy_missing_values_view",
|
97
|
+
engine="django.db.backends.mysql",
|
98
|
+
),
|
99
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
100
|
+
"", "onstudy_missing_values_view", engine="django.db.backends.mysql"
|
101
|
+
),
|
102
|
+
atomic=False,
|
103
|
+
),
|
104
|
+
django_db_views.operations.ViewRunPython(
|
105
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
106
|
+
"select *, get_random_uuid() as id, now() as created, 'onstudy_missing_values_view' as report_model from (SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No HIV Diagnosis date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.hiv_diagnosis_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4 IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date but previous ARV is YES' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.has_previous_arv_regimen = 'YES' AND crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'Other current ARV regimen missing' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id LEFT JOIN meta_lists_arvregimens AS arvregimen ON crf.current_arv_regimen_id = arvregimen.id WHERE crf.other_current_arv_regimen IS NULL AND arvregimen.name = 'OTHER' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified) as A ORDER BY subject_identifier, site_id",
|
107
|
+
"onstudy_missing_values_view",
|
108
|
+
engine="django.db.backends.postgresql",
|
109
|
+
),
|
110
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
111
|
+
"", "onstudy_missing_values_view", engine="django.db.backends.postgresql"
|
112
|
+
),
|
113
|
+
atomic=False,
|
114
|
+
),
|
115
|
+
django_db_views.operations.ViewRunPython(
|
116
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
117
|
+
"select *, uuid() as id, datetime() as created, 'onstudy_missing_values_view' as report_model from (SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No HIV Diagnosis date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.hiv_diagnosis_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4 IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date but previous ARV is YES' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.has_previous_arv_regimen = 'YES' AND crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'Other current ARV regimen missing' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id LEFT JOIN meta_lists_arvregimens AS arvregimen ON crf.current_arv_regimen_id = arvregimen.id WHERE crf.other_current_arv_regimen IS NULL AND arvregimen.name = 'OTHER' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified) as A ORDER BY subject_identifier, site_id",
|
118
|
+
"onstudy_missing_values_view",
|
119
|
+
engine="django.db.backends.sqlite3",
|
120
|
+
),
|
121
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
122
|
+
"", "onstudy_missing_values_view", engine="django.db.backends.sqlite3"
|
123
|
+
),
|
124
|
+
atomic=False,
|
125
|
+
),
|
126
|
+
django_db_views.operations.ViewRunPython(
|
127
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
128
|
+
"select *, uuid() as id, now() as `created`, 'meta_reports.patienthistorymissingbaselinecd4' as `report_model` from (SELECT subject_identifier, v.visit_code, v.visit_code_sequence, cd4, cd4_date, crf.site_id, crf.user_created, crf.user_modified, crf.modified FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON crf.subject_visit_id = v.id WHERE cd4 IS NULL OR cd4_date IS NULL) as A ORDER BY subject_identifier, site_id",
|
129
|
+
"patient_history_missing_baseline_cd4_view",
|
130
|
+
engine="django.db.backends.mysql",
|
131
|
+
),
|
132
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
133
|
+
"select *, uuid() as id, now() as created, \n 'meta_reports.patienthistorymissingbaselinecd4' as report_model \n from (\n select subject_identifier, v.visit_code, v.visit_code_sequence,cd4,\n cd4_date, crf.site_id, crf.user_created, crf.user_modified,\n crf.modified\n from meta_subject_patienthistory as crf\n left join meta_subject_subjectvisit as v on crf.subject_visit_id=v.id\n where cd4 is null or cd4_date is null\n ) as A\n order by subject_identifier",
|
134
|
+
"patient_history_missing_baseline_cd4_view",
|
135
|
+
engine="django.db.backends.mysql",
|
136
|
+
),
|
137
|
+
atomic=False,
|
138
|
+
),
|
139
|
+
django_db_views.operations.ViewRunPython(
|
140
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
141
|
+
"select *, get_random_uuid() as id, now() as created, 'meta_reports.patienthistorymissingbaselinecd4' as report_model from (SELECT subject_identifier, v.visit_code, v.visit_code_sequence, cd4, cd4_date, crf.site_id, crf.user_created, crf.user_modified, crf.modified FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON crf.subject_visit_id = v.id WHERE cd4 IS NULL OR cd4_date IS NULL) as A ORDER BY subject_identifier, site_id",
|
142
|
+
"patient_history_missing_baseline_cd4_view",
|
143
|
+
engine="django.db.backends.postgresql",
|
144
|
+
),
|
145
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
146
|
+
"select *, get_random_uuid() as id, now() as created, \n 'meta_reports.patienthistorymissingbaselinecd4' as report_model \n from (\n select subject_identifier, v.visit_code, v.visit_code_sequence,cd4,\n cd4_date, crf.site_id, crf.user_created, crf.user_modified,\n crf.modified\n from meta_subject_patienthistory as crf\n left join meta_subject_subjectvisit as v on crf.subject_visit_id=v.id\n where cd4 is null or cd4_date is null\n ) as A\n order by subject_identifier",
|
147
|
+
"patient_history_missing_baseline_cd4_view",
|
148
|
+
engine="django.db.backends.postgresql",
|
149
|
+
),
|
150
|
+
atomic=False,
|
151
|
+
),
|
152
|
+
django_db_views.operations.ViewRunPython(
|
153
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
154
|
+
"select *, uuid() as id, datetime() as created, 'meta_reports.patienthistorymissingbaselinecd4' as report_model from (SELECT subject_identifier, v.visit_code, v.visit_code_sequence, cd4, cd4_date, crf.site_id, crf.user_created, crf.user_modified, crf.modified FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON crf.subject_visit_id = v.id WHERE cd4 IS NULL OR cd4_date IS NULL) as A ORDER BY subject_identifier, site_id",
|
155
|
+
"patient_history_missing_baseline_cd4_view",
|
156
|
+
engine="django.db.backends.sqlite3",
|
157
|
+
),
|
158
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
159
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`, 'meta_reports.patienthistorymissingbaselinecd4' as report_model \n from (\n select subject_identifier, v.visit_code, v.visit_code_sequence,cd4,\n cd4_date, crf.site_id, crf.user_created, crf.user_modified,\n crf.modified\n from meta_subject_patienthistory as crf\n left join meta_subject_subjectvisit as v on crf.subject_visit_id=v.id\n where cd4 is null or cd4_date is null\n ) as A\n order by subject_identifier",
|
160
|
+
"patient_history_missing_baseline_cd4_view",
|
161
|
+
engine="django.db.backends.sqlite3",
|
162
|
+
),
|
163
|
+
atomic=False,
|
164
|
+
),
|
165
|
+
django_db_views.operations.ViewRunPython(
|
166
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
167
|
+
"select *, uuid() as id, now() as `created`, 'meta_reports.unattendedthreeinrow' as `report_model` from (SELECT subject_identifier, site_id, appt_datetime, `first_value`, `second_value`, `third_value`, DATEDIFF(`third_date`, `first_date`) AS `interval_days`, DATEDIFF(NOW(), `first_date`) AS `from_now_days` FROM (SELECT subject_identifier, site_id, appt_datetime, FIRST_VALUE(visit_code) OVER w AS `first_value`, NTH_VALUE(visit_code, 2) OVER w AS `second_value`, NTH_VALUE(visit_code, 3) OVER w AS `third_value`, FIRST_VALUE(appt_datetime) OVER w AS `first_date`, NTH_VALUE(appt_datetime, 3) OVER w AS `third_date` FROM edc_appointment_appointment WHERE visit_code_sequence = 0 AND appt_status = 'New' AND appt_datetime <= NOW() WINDOW w AS (PARTITION BY subject_identifier ORDER BY appt_datetime ROWS BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW)) AS B WHERE NOT `second_value` IS NULL AND NOT `third_value` IS NULL) as A ORDER BY subject_identifier, site_id",
|
168
|
+
"unattended_three_in_row_view",
|
169
|
+
engine="django.db.backends.mysql",
|
170
|
+
),
|
171
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
172
|
+
"# noqa\n select *, uuid() as id, now() as created, 'meta_reports.unattendedthreeinrow' as `report_model` from (\n select subject_identifier, site_id, appt_datetime, `first_value`, `second_value`, `third_value`,\n datediff(third_date, first_date) as `interval_days`,\n datediff(now(), first_date) as `from_now_days`\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as `first_value`,\n NTH_VALUE(visit_code, 2) OVER w as `second_value`,\n NTH_VALUE(visit_code, 3) OVER w as `third_value`,\n FIRST_VALUE(appt_datetime) OVER w as `first_date`,\n NTH_VALUE(appt_datetime, 3) OVER w as `third_date`\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where `second_value` is not null and `third_value` is not null\n ) as B\n order by site_id, from_now_days desc",
|
173
|
+
"unattended_three_in_row_view",
|
174
|
+
engine="django.db.backends.mysql",
|
175
|
+
),
|
176
|
+
atomic=False,
|
177
|
+
),
|
178
|
+
django_db_views.operations.ViewRunPython(
|
179
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
180
|
+
'select *, get_random_uuid() as id, now() as created, \'meta_reports.unattendedthreeinrow\' as report_model from (SELECT subject_identifier, site_id, appt_datetime, "first_value", "second_value", "third_value", CAST(AGE(CAST("third_date" AS TIMESTAMP), CAST("first_date" AS TIMESTAMP)) AS BIGINT) AS "interval_days", CAST(AGE(CAST(NOW() AS TIMESTAMP), CAST("first_date" AS TIMESTAMP)) AS BIGINT) AS "from_now_days" FROM (SELECT subject_identifier, site_id, appt_datetime, FIRST_VALUE(visit_code) OVER w AS "first_value", NTH_VALUE(visit_code, 2) OVER w AS "second_value", NTH_VALUE(visit_code, 3) OVER w AS "third_value", FIRST_VALUE(appt_datetime) OVER w AS "first_date", NTH_VALUE(appt_datetime, 3) OVER w AS "third_date" FROM edc_appointment_appointment WHERE visit_code_sequence = 0 AND appt_status = \'New\' AND appt_datetime <= NOW() WINDOW w AS (PARTITION BY subject_identifier ORDER BY appt_datetime NULLS FIRST ROWS BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW)) AS B WHERE NOT "second_value" IS NULL AND NOT "third_value" IS NULL) as A ORDER BY subject_identifier, site_id',
|
181
|
+
"unattended_three_in_row_view",
|
182
|
+
engine="django.db.backends.postgresql",
|
183
|
+
),
|
184
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
185
|
+
"# noqa\n select *, gen_random_uuid() as id, now() as created,\n 'meta_reports.unattendedthreeinrow' as report_model\n from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days\n from (\n select subject_identifier,site_id,appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 3) OVER w as third_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n ) as B\n order by site_id, from_now_days desc",
|
186
|
+
"unattended_three_in_row_view",
|
187
|
+
engine="django.db.backends.postgresql",
|
188
|
+
),
|
189
|
+
atomic=False,
|
190
|
+
),
|
191
|
+
django_db_views.operations.ViewRunPython(
|
192
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
193
|
+
'select *, uuid() as id, datetime() as created, \'meta_reports.unattendedthreeinrow\' as report_model from (SELECT subject_identifier, site_id, appt_datetime, "first_value", "second_value", "third_value", CAST((JULIANDAY("third_date") - JULIANDAY("first_date")) AS INTEGER) AS "interval_days", CAST((JULIANDAY(NOW()) - JULIANDAY("first_date")) AS INTEGER) AS "from_now_days" FROM (SELECT subject_identifier, site_id, appt_datetime, FIRST_VALUE(visit_code) OVER w AS "first_value", NTH_VALUE(visit_code, 2) OVER w AS "second_value", NTH_VALUE(visit_code, 3) OVER w AS "third_value", FIRST_VALUE(appt_datetime) OVER w AS "first_date", NTH_VALUE(appt_datetime, 3) OVER w AS "third_date" FROM edc_appointment_appointment WHERE visit_code_sequence = 0 AND appt_status = \'New\' AND appt_datetime <= NOW() WINDOW w AS (PARTITION BY subject_identifier ORDER BY appt_datetime ROWS BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW)) AS B WHERE NOT "second_value" IS NULL AND NOT "third_value" IS NULL) as A ORDER BY subject_identifier, site_id',
|
194
|
+
"unattended_three_in_row_view",
|
195
|
+
engine="django.db.backends.sqlite3",
|
196
|
+
),
|
197
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
198
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created,'meta_reports.unattendedthreeinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS INTEGER) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS INTEGER) as from_now_days\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 3) OVER w as third_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= datetime()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n ) as B\n order by site_id, from_now_days desc",
|
199
|
+
"unattended_three_in_row_view",
|
200
|
+
engine="django.db.backends.sqlite3",
|
201
|
+
),
|
202
|
+
atomic=False,
|
203
|
+
),
|
204
|
+
django_db_views.operations.ViewRunPython(
|
205
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
206
|
+
"with appointments as (select subject_identifier, site_id, visit_code, visit_code_sequence,\nappt_datetime, case when appt_timing=\"missed\" then \"New\" else appt_status end as `appt_status`,\ncase when appt_timing=\"missed\" then 1 else 0 end as `missed`\nfrom edc_appointment_appointment\nwhere visit_code_sequence=0 and appt_datetime<=now()\norder by subject_identifier, appt_datetime) select *, uuid() as id, now() as `created`, 'meta_reports.unattendedthreeinrow2' as `report_model` from (SELECT DISTINCT subject_identifier, site_id, `first_value`, `second_value`, `third_value`, DATEDIFF(`third_date`, `first_date`) AS interval_days, DATEDIFF(NOW(), `first_date`) AS from_now_days, `first_status`, `second_status`, `third_status`, SUM(missed) AS missed_count FROM (SELECT subject_identifier, site_id, appt_datetime, `missed`, FIRST_VALUE(appt_status) OVER w AS `third_status`, NTH_VALUE(appt_status, 2) OVER w AS `second_status`, NTH_VALUE(appt_status, 3) OVER w AS `first_status`, FIRST_VALUE(visit_code) OVER w AS `third_value`, NTH_VALUE(visit_code, 2) OVER w AS `second_value`, NTH_VALUE(visit_code, 3) OVER w AS `first_value`, FIRST_VALUE(appt_datetime) OVER w AS `third_date`, NTH_VALUE(appt_datetime, 2) OVER w AS `second_date`, NTH_VALUE(appt_datetime, 3) OVER w AS `first_date` FROM appointments WINDOW w AS (PARTITION BY subject_identifier ORDER BY appt_datetime DESC ROWS BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW)) AS B WHERE NOT `second_value` IS NULL AND NOT `third_value` IS NULL AND `first_status` = 'New' AND `second_status` = 'New' AND `third_status` = 'New' GROUP BY subject_identifier, site_id, `first_value`, `second_value`, `third_value`, DATEDIFF(`third_date`, `first_date`), DATEDIFF(NOW(), `first_date`), `first_status`, `second_status`, `third_status` ORDER BY subject_identifier, site_id) as A ORDER BY subject_identifier, site_id",
|
207
|
+
"unattended_three_in_row2_view",
|
208
|
+
engine="django.db.backends.mysql",
|
209
|
+
),
|
210
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
211
|
+
"# noqa\n with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as `appt_status`,\n case when appt_timing='missed' then 1 else 0 end as `missed`\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n select *, uuid() as `id`, now() as `created`, 'meta_reports.unattendedthreeinrow2' as `report_model` from (\n select distinct subject_identifier, site_id, `first_value`, `second_value`, `third_value`,\n datediff(third_date, first_date) as `interval_days`,\n datediff(now(), first_date) as `from_now_days`,\n `first_status`, `second_status`, `third_status`, sum(missed) as `missed_count`\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as `third_status`,\n NTH_VALUE(appt_status, 2) OVER w as `second_status`,\n NTH_VALUE(appt_status, 3) OVER w as `first_status`,\n FIRST_VALUE(visit_code) OVER w as `third_value`,\n NTH_VALUE(visit_code, 2) OVER w as `second_value`,\n NTH_VALUE(visit_code, 3) OVER w as `first_value`,\n FIRST_VALUE(appt_datetime) OVER w as `third_date`,\n NTH_VALUE(appt_datetime, 2) OVER w as `second_date`,\n NTH_VALUE(appt_datetime, 3) OVER w as `first_date`\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where `second_value` is not null and `third_value` is not null\n and `first_status`='New'\n and `second_status`='New'\n and `third_status`='New'\n group by subject_identifier, site_id, `first_value`, `second_value`, `third_value`,\n datediff(`third_date`, `first_date`),\n datediff(now(), `first_date`),\n `first_status`, `second_status`, `third_status`\n order by subject_identifier, site_id\n ) as B",
|
212
|
+
"unattended_three_in_row2_view",
|
213
|
+
engine="django.db.backends.mysql",
|
214
|
+
),
|
215
|
+
atomic=False,
|
216
|
+
),
|
217
|
+
django_db_views.operations.ViewRunPython(
|
218
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
219
|
+
'with appointments as (select subject_identifier, site_id, visit_code, visit_code_sequence,\nappt_datetime, case when appt_timing="missed" then "New" else appt_status end as `appt_status`,\ncase when appt_timing="missed" then 1 else 0 end as `missed`\nfrom edc_appointment_appointment\nwhere visit_code_sequence=0 and appt_datetime<=now()\norder by subject_identifier, appt_datetime) select *, get_random_uuid() as id, now() as created, \'meta_reports.unattendedthreeinrow2\' as report_model from (SELECT DISTINCT subject_identifier, site_id, "first_value", "second_value", "third_value", CAST(AGE(CAST("third_date" AS TIMESTAMP), CAST("first_date" AS TIMESTAMP)) AS BIGINT) AS interval_days, CAST(AGE(CAST(NOW() AS TIMESTAMP), CAST("first_date" AS TIMESTAMP)) AS BIGINT) AS from_now_days, "first_status", "second_status", "third_status", SUM(missed) AS missed_count FROM (SELECT subject_identifier, site_id, appt_datetime, "missed", FIRST_VALUE(appt_status) OVER w AS "third_status", NTH_VALUE(appt_status, 2) OVER w AS "second_status", NTH_VALUE(appt_status, 3) OVER w AS "first_status", FIRST_VALUE(visit_code) OVER w AS "third_value", NTH_VALUE(visit_code, 2) OVER w AS "second_value", NTH_VALUE(visit_code, 3) OVER w AS "first_value", FIRST_VALUE(appt_datetime) OVER w AS "third_date", NTH_VALUE(appt_datetime, 2) OVER w AS "second_date", NTH_VALUE(appt_datetime, 3) OVER w AS "first_date" FROM appointments WINDOW w AS (PARTITION BY subject_identifier ORDER BY appt_datetime DESC NULLS LAST ROWS BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW)) AS B WHERE NOT "second_value" IS NULL AND NOT "third_value" IS NULL AND "first_status" = \'New\' AND "second_status" = \'New\' AND "third_status" = \'New\' GROUP BY subject_identifier, site_id, "first_value", "second_value", "third_value", CAST(AGE(CAST("third_date" AS TIMESTAMP), CAST("first_date" AS TIMESTAMP)) AS BIGINT), CAST(AGE(CAST(NOW() AS TIMESTAMP), CAST("first_date" AS TIMESTAMP)) AS BIGINT), "first_status", "second_status", "third_status" ORDER BY subject_identifier NULLS FIRST, site_id NULLS FIRST) as A ORDER BY subject_identifier, site_id',
|
220
|
+
"unattended_three_in_row2_view",
|
221
|
+
engine="django.db.backends.postgresql",
|
222
|
+
),
|
223
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
224
|
+
"# noqa\n with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as appt_status,\n case when appt_timing='missed' then 1 else 0 end as missed\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n select *, gen_random_uuid() as id, now() as created, 'meta_reports.unattendedthreeinrow2' as report_model\n from (\n select distinct subject_identifier, site_id, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days,\n first_status, second_status, third_status, sum(missed) as missed_count\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as third_status,\n NTH_VALUE(appt_status, 2) OVER w as second_status,\n NTH_VALUE(appt_status, 3) OVER w as first_status,\n FIRST_VALUE(visit_code) OVER w as third_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as first_value,\n FIRST_VALUE(appt_datetime) OVER w as third_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date,\n NTH_VALUE(appt_datetime, 3) OVER w as first_date\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n and first_status='New'\n and second_status='New'\n and third_status='New'\n group by subject_identifier, site_id, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date),\n EXTRACT(DAY FROM now() - first_date),\n first_status, second_status, third_status\n order by subject_identifier, site_id\n ) as B",
|
225
|
+
"unattended_three_in_row2_view",
|
226
|
+
engine="django.db.backends.postgresql",
|
227
|
+
),
|
228
|
+
atomic=False,
|
229
|
+
),
|
230
|
+
django_db_views.operations.ViewRunPython(
|
231
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
232
|
+
'with appointments as (select subject_identifier, site_id, visit_code, visit_code_sequence,\nappt_datetime, case when appt_timing="missed" then "New" else appt_status end as `appt_status`,\ncase when appt_timing="missed" then 1 else 0 end as `missed`\nfrom edc_appointment_appointment\nwhere visit_code_sequence=0 and appt_datetime<=now()\norder by subject_identifier, appt_datetime) select *, uuid() as id, datetime() as created, \'meta_reports.unattendedthreeinrow2\' as report_model from (SELECT DISTINCT subject_identifier, site_id, "first_value", "second_value", "third_value", CAST((JULIANDAY("third_date") - JULIANDAY("first_date")) AS INTEGER) AS interval_days, CAST((JULIANDAY(NOW()) - JULIANDAY("first_date")) AS INTEGER) AS from_now_days, "first_status", "second_status", "third_status", SUM(missed) AS missed_count FROM (SELECT subject_identifier, site_id, appt_datetime, "missed", FIRST_VALUE(appt_status) OVER w AS "third_status", NTH_VALUE(appt_status, 2) OVER w AS "second_status", NTH_VALUE(appt_status, 3) OVER w AS "first_status", FIRST_VALUE(visit_code) OVER w AS "third_value", NTH_VALUE(visit_code, 2) OVER w AS "second_value", NTH_VALUE(visit_code, 3) OVER w AS "first_value", FIRST_VALUE(appt_datetime) OVER w AS "third_date", NTH_VALUE(appt_datetime, 2) OVER w AS "second_date", NTH_VALUE(appt_datetime, 3) OVER w AS "first_date" FROM appointments WINDOW w AS (PARTITION BY subject_identifier ORDER BY appt_datetime DESC ROWS BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW)) AS B WHERE NOT "second_value" IS NULL AND NOT "third_value" IS NULL AND "first_status" = \'New\' AND "second_status" = \'New\' AND "third_status" = \'New\' GROUP BY subject_identifier, site_id, "first_value", "second_value", "third_value", CAST((JULIANDAY("third_date") - JULIANDAY("first_date")) AS INTEGER), CAST((JULIANDAY(NOW()) - JULIANDAY("first_date")) AS INTEGER), "first_status", "second_status", "third_status" ORDER BY subject_identifier, site_id) as A ORDER BY subject_identifier, site_id',
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233
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+
"unattended_three_in_row2_view",
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engine="django.db.backends.sqlite3",
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+
),
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236
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+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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"# noqa\n with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as `appt_status`,\n case when appt_timing='missed' then 1 else 0 end as `missed`\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created, 'meta_reports.unattendedthreeinrow2' as report_model from (\n select distinct subject_identifier, site_id, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS Integer) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer) as from_now_days,\n first_status, second_status, third_status, sum(missed) as missed_count\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as third_status,\n NTH_VALUE(appt_status, 2) OVER w as second_status,\n NTH_VALUE(appt_status, 3) OVER w as first_status,\n FIRST_VALUE(visit_code) OVER w as third_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as first_value,\n FIRST_VALUE(appt_datetime) OVER w as third_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date,\n NTH_VALUE(appt_datetime, 3) OVER w as first_date\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n and first_status='New'\n and second_status='New'\n and third_status='New'\n group by subject_identifier, site_id, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS Integer),\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer),\n first_status, second_status, third_status\n order by subject_identifier, site_id\n ) as B",
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"unattended_three_in_row2_view",
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engine="django.db.backends.sqlite3",
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),
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atomic=False,
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),
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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"select *, uuid() as id, now() as `created`, 'meta_reports.unattendedtwoinrow' as `report_model` from (SELECT subject_identifier, site_id, appt_datetime, `first_value`, `second_value`, DATEDIFF(`second_date`, `first_date`) AS interval_days, DATEDIFF(NOW(), `first_date`) AS from_now_days FROM (SELECT subject_identifier, site_id, appt_datetime, FIRST_VALUE(visit_code) OVER w AS `first_value`, NTH_VALUE(visit_code, 2) OVER w AS `second_value`, NTH_VALUE(visit_code, 3) OVER w AS `third_value`, FIRST_VALUE(appt_datetime) OVER w AS `first_date`, NTH_VALUE(appt_datetime, 2) OVER w AS `second_date` FROM edc_appointment_appointment WHERE visit_code_sequence = 0 AND appt_status = 'New' AND appt_datetime <= NOW() WINDOW w AS (PARTITION BY subject_identifier ORDER BY appt_datetime ROWS BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW)) AS B WHERE NOT `second_value` IS NULL AND `third_value` IS NULL) as A ORDER BY site_id, from_now_days desc",
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"unattended_two_in_row_view",
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engine="django.db.backends.mysql",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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+
"# noqa\n select *, uuid() as `id`, now() as `created`, 'meta_reports.unattendedtwoinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, `first_value`, `second_value`,\n datediff(`second_date`, `first_date`) as `interval_days`,\n datediff(now(), `first_date`) as `from_now_days`\n from (\n select subject_identifier ,site_id, appt_datetime,\n FIRST_VALUE(`visit_code`) OVER w as `first_value`,\n NTH_VALUE(`visit_code`, 2) OVER w as `second_value`,\n NTH_VALUE(`visit_code`, 3) OVER w as `third_value`,\n FIRST_VALUE(`appt_datetime`) OVER w as `first_date`,\n NTH_VALUE(`appt_datetime`, 2) OVER w as `second_date`\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where `second_value` is not null and `third_value` is null\n ) as A2\n order by site_id, `from_now_days` desc",
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"unattended_two_in_row_view",
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engine="django.db.backends.mysql",
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),
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atomic=False,
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),
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django_db_views.operations.ViewRunPython(
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code=django_db_views.migration_functions.ForwardViewMigration(
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'select *, get_random_uuid() as id, now() as created, \'meta_reports.unattendedtwoinrow\' as report_model from (SELECT subject_identifier, site_id, appt_datetime, "first_value", "second_value", CAST(AGE(CAST("second_date" AS TIMESTAMP), CAST("first_date" AS TIMESTAMP)) AS BIGINT) AS interval_days, CAST(AGE(CAST(NOW() AS TIMESTAMP), CAST("first_date" AS TIMESTAMP)) AS BIGINT) AS from_now_days FROM (SELECT subject_identifier, site_id, appt_datetime, FIRST_VALUE(visit_code) OVER w AS "first_value", NTH_VALUE(visit_code, 2) OVER w AS "second_value", NTH_VALUE(visit_code, 3) OVER w AS "third_value", FIRST_VALUE(appt_datetime) OVER w AS "first_date", NTH_VALUE(appt_datetime, 2) OVER w AS "second_date" FROM edc_appointment_appointment WHERE visit_code_sequence = 0 AND appt_status = \'New\' AND appt_datetime <= NOW() WINDOW w AS (PARTITION BY subject_identifier ORDER BY appt_datetime NULLS FIRST ROWS BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW)) AS B WHERE NOT "second_value" IS NULL AND "third_value" IS NULL) as A ORDER BY site_id, from_now_days desc',
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"unattended_two_in_row_view",
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engine="django.db.backends.postgresql",
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),
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reverse_code=django_db_views.migration_functions.BackwardViewMigration(
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+
"# noqa\n select *, gen_random_uuid() as id, now() as created, 'meta_reports.unattendedtwoinrow' as report_model\n from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value,\n EXTRACT(DAY FROM second_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where second_value is not null and third_value is null\n ) as A2\n order by site_id, from_now_days desc",
|
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+
"unattended_two_in_row_view",
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+
engine="django.db.backends.postgresql",
|
266
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+
),
|
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+
atomic=False,
|
268
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+
),
|
269
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+
django_db_views.operations.ViewRunPython(
|
270
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
271
|
+
'select *, uuid() as id, datetime() as created, \'meta_reports.unattendedtwoinrow\' as report_model from (SELECT subject_identifier, site_id, appt_datetime, "first_value", "second_value", CAST((JULIANDAY("second_date") - JULIANDAY("first_date")) AS INTEGER) AS interval_days, CAST((JULIANDAY(NOW()) - JULIANDAY("first_date")) AS INTEGER) AS from_now_days FROM (SELECT subject_identifier, site_id, appt_datetime, FIRST_VALUE(visit_code) OVER w AS "first_value", NTH_VALUE(visit_code, 2) OVER w AS "second_value", NTH_VALUE(visit_code, 3) OVER w AS "third_value", FIRST_VALUE(appt_datetime) OVER w AS "first_date", NTH_VALUE(appt_datetime, 2) OVER w AS "second_date" FROM edc_appointment_appointment WHERE visit_code_sequence = 0 AND appt_status = \'New\' AND appt_datetime <= NOW() WINDOW w AS (PARTITION BY subject_identifier ORDER BY appt_datetime ROWS BETWEEN UNBOUNDED PRECEDING AND CURRENT ROW)) AS B WHERE NOT "second_value" IS NULL AND "third_value" IS NULL) as A ORDER BY site_id, from_now_days desc',
|
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+
"unattended_two_in_row_view",
|
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|
+
engine="django.db.backends.sqlite3",
|
274
|
+
),
|
275
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
276
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created, 'meta_reports.unattendedtwoinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value,\n CAST(JulianDay(second_date) - JulianDay(first_date) AS Integer) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer) as from_now_days\n from (\n select subject_identifier ,site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= datetime()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where second_value is not null and third_value is null\n ) as A2\n order by site_id, from_now_days desc",
|
277
|
+
"unattended_two_in_row_view",
|
278
|
+
engine="django.db.backends.sqlite3",
|
279
|
+
),
|
280
|
+
atomic=False,
|
281
|
+
),
|
282
|
+
]
|
@@ -0,0 +1,14 @@
|
|
1
|
+
# Generated by Django 5.0.8 on 2024-08-28 19:29
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
|
+
|
8
|
+
class Migration(migrations.Migration):
|
9
|
+
|
10
|
+
dependencies = [
|
11
|
+
("meta_reports", "0040_auto_20240824_0412"),
|
12
|
+
]
|
13
|
+
|
14
|
+
operations = []
|