meta-edc 0.3.15__py3-none-any.whl → 0.3.50__py3-none-any.whl
Sign up to get free protection for your applications and to get access to all the features.
- meta_ae/action_items.py +2 -2
- meta_ae/migrations/0017_auto_20221130_2257.py +12 -7
- meta_ae/tests/holidays.csv +1 -1
- meta_analytics/README.rst +17 -0
- meta_analytics/dataframes/__init__.py +19 -0
- meta_analytics/dataframes/constants.py +33 -0
- meta_analytics/dataframes/enrolled/__init__.py +1 -0
- meta_analytics/dataframes/enrolled/get_glucose_df.py +122 -0
- meta_analytics/dataframes/get_eos_df.py +26 -0
- meta_analytics/dataframes/get_last_imp_visits_df.py +101 -0
- meta_analytics/dataframes/glucose_endpoints/__init__.py +2 -0
- meta_analytics/dataframes/glucose_endpoints/endpoint_by_date.py +183 -0
- meta_analytics/dataframes/glucose_endpoints/glucose_endpoints_by_date.py +531 -0
- meta_analytics/dataframes/screening/__init__.py +2 -0
- meta_analytics/dataframes/screening/get_glucose_tested_only_df.py +20 -0
- meta_analytics/dataframes/screening/get_screening_df.py +163 -0
- meta_analytics/dataframes/utils.py +65 -0
- meta_analytics/get_tables.py +81 -0
- meta_analytics/tables/__init__.py +2 -0
- meta_analytics/tables/eligible.py +106 -0
- meta_analytics/tables/enrolled/__init__.py +0 -0
- meta_analytics/tables/enrolled/glucose.py +28 -0
- meta_analytics/tables/has_dm.py +61 -0
- meta_analytics/tests/__init__.py +0 -0
- meta_analytics/tests/test_endpoints_by_date.py +94 -0
- meta_auth/auth_objects.py +22 -0
- meta_auth/auths.py +18 -3
- meta_consent/action_items.py +18 -1
- meta_consent/admin/__init__.py +1 -0
- meta_consent/admin/subject_consent_v1_ext_admin.py +45 -0
- meta_consent/baker_recipes.py +1 -0
- meta_consent/consents.py +20 -1
- meta_consent/constants.py +1 -0
- meta_consent/forms/__init__.py +1 -0
- meta_consent/forms/subject_consent_v1_ext_form.py +16 -0
- meta_consent/locale/lg/LC_MESSAGES/django.po +69 -0
- meta_consent/locale/sw/LC_MESSAGES/django.po +12 -12
- meta_consent/migrations/0026_historicalsubjectconsentv1ext_subjectconsentv1ext.py +544 -0
- meta_consent/migrations/0027_auto_20250111_0344.py +30 -0
- meta_consent/models/__init__.py +1 -0
- meta_consent/models/signals.py +18 -0
- meta_consent/models/subject_consent_v1_ext.py +29 -0
- meta_consent/tests/holidays.csv +1 -1
- meta_dashboard/locale/lg/LC_MESSAGES/django.po +30 -0
- meta_dashboard/locale/sw/LC_MESSAGES/django.po +11 -2
- meta_dashboard/navbars.py +3 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/buttons/eligibility_button.html +1 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/buttons/screening_button.html +1 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/subject/dashboard/sidebar.html +24 -0
- meta_dashboard/templates/meta_dashboard/bootstrap3/subject/dashboard.html +3 -0
- meta_dashboard/templatetags/meta_dashboard_extras.py +1 -1
- meta_dashboard/tests/holidays.csv +1 -1
- meta_dashboard/tests/urls.py +0 -1
- meta_dashboard/view_utils/__init__.py +6 -0
- meta_dashboard/view_utils/subject_screening_button.py +2 -2
- meta_dashboard/views/subject/dashboard/dashboard_view.py +38 -0
- meta_edc/__init__.py +7 -0
- meta_edc/celery.py +4 -13
- meta_edc/celery_live.py +18 -0
- meta_edc/celery_uat.py +24 -0
- meta_edc/management/commands/update_forms_reference.py +6 -2
- meta_edc/migrations/__init__.py +0 -0
- meta_edc/navbars.py +2 -1
- meta_edc/settings/debug.py +10 -2
- meta_edc/settings/defaults.py +58 -43
- meta_edc/templates/meta_edc/bootstrap3/home.html +5 -2
- meta_edc/tests/tests/test_endpoints.py +2 -0
- meta_edc/urls.py +4 -1
- meta_edc/wsgi.py +1 -1
- meta_edc/wsgi_live.py +1 -1
- meta_edc/wsgi_uat.py +1 -1
- meta_edc-0.3.50.dist-info/AUTHORS +0 -0
- meta_edc-0.3.50.dist-info/METADATA +766 -0
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/RECORD +316 -127
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/WHEEL +1 -1
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/top_level.txt +1 -0
- meta_pharmacy/admin/__init__.py +2 -0
- meta_pharmacy/admin/rx_admin.py +75 -0
- meta_pharmacy/admin/substitutions_admin.py +67 -0
- meta_pharmacy/admin_site.py +9 -0
- meta_pharmacy/apps.py +5 -0
- meta_pharmacy/constants.py +10 -0
- meta_pharmacy/forms/__init__.py +2 -0
- meta_pharmacy/forms/rx_form.py +16 -0
- meta_pharmacy/forms/substitutions_form.py +54 -0
- meta_pharmacy/label_configs.py +30 -0
- meta_pharmacy/labels/__init__.py +5 -0
- meta_pharmacy/labels/draw_label_for_subject_with_barcode.py +62 -0
- meta_pharmacy/labels/draw_label_for_subject_with_code128.py +14 -0
- meta_pharmacy/labels/draw_label_with_test_data.py +26 -0
- meta_pharmacy/labels/label_data.py +14 -0
- meta_pharmacy/labels/print_sheets.py +97 -0
- meta_pharmacy/list_data.py +8 -0
- meta_pharmacy/management/__init__.py +0 -0
- meta_pharmacy/management/commands/__init__.py +0 -0
- meta_pharmacy/management/commands/update_initial_pharmacy_data.py +10 -0
- meta_pharmacy/migrations/0002_initial.py +695 -0
- meta_pharmacy/migrations/0003_auto_20240909_2335.py +64 -0
- meta_pharmacy/migrations/0004_alter_historicalsubstitutions_report_datetime_and_more.py +23 -0
- meta_pharmacy/migrations/0005_auto_20240911_0352.py +17 -0
- meta_pharmacy/migrations/0006_lotnumber_label.py +289 -0
- meta_pharmacy/migrations/0007_lotnumber_medication.py +24 -0
- meta_pharmacy/migrations/0008_remove_lotnumber_medication_and_more.py +390 -0
- meta_pharmacy/migrations/0009_remove_historicalrx_slug.py +17 -0
- meta_pharmacy/models/__init__.py +3 -0
- meta_pharmacy/models/label_data.py +38 -0
- meta_pharmacy/models/rx.py +18 -0
- meta_pharmacy/models/rx_label.py +39 -0
- meta_pharmacy/models/substitutions.py +88 -0
- meta_pharmacy/urls.py +8 -0
- meta_pharmacy/utils/__init__.py +1 -0
- meta_pharmacy/utils/update_initial_pharmacy_data.py +146 -0
- meta_prn/action_items.py +9 -1
- meta_prn/admin/pregnancy_notification_admin.py +6 -2
- meta_prn/migrations/0034_auto_20220630_1110.py +3 -3
- meta_prn/migrations/0035_auto_20220630_1140.py +59 -56
- meta_prn/tests/tests/test_dm_referral.py +3 -6
- meta_reports/__init__.py +1 -0
- meta_reports/admin/__init__.py +15 -0
- meta_reports/admin/dbviews/__init__.py +14 -0
- meta_reports/admin/dbviews/glucose_summary_admin.py +116 -0
- meta_reports/admin/dbviews/imp_substitutions_admin.py +101 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/__init__.py +2 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/note_model_admin.py +53 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/unmanaged_model_admin.py +84 -0
- meta_reports/admin/dbviews/on_study_missing_lab_values_admin/__init__.py +1 -0
- meta_reports/admin/dbviews/on_study_missing_lab_values_admin/unmanaged_model_admin.py +13 -0
- meta_reports/admin/dbviews/on_study_missing_values_admin/__init__.py +1 -0
- meta_reports/admin/dbviews/on_study_missing_values_admin/unmanaged_model_admin.py +13 -0
- meta_reports/admin/dbviews/patient_history_missing_baseline_cd4_admin.py +58 -0
- meta_reports/admin/dbviews/unattended_three_in_row2_admin.py +47 -0
- meta_reports/admin/dbviews/unattended_three_in_row_admin.py +35 -0
- meta_reports/admin/dbviews/unattended_two_in_row_admin.py +34 -0
- meta_reports/admin/endpoints_admin.py +14 -0
- meta_reports/admin/endpoints_all_admin.py +13 -0
- meta_reports/admin/last_imp_refill_admin.py +181 -0
- meta_reports/admin/list_filters.py +30 -0
- meta_reports/admin/modeladmin_mixins.py +112 -0
- meta_reports/admin_site.py +5 -0
- meta_reports/apps.py +1 -16
- meta_reports/forms/__init__.py +1 -0
- meta_reports/forms/missing_ogtt_note_form.py +33 -0
- meta_reports/management/__init__.py +0 -0
- meta_reports/management/commands/__init__.py +0 -0
- meta_reports/management/commands/generate_endpoints.py +13 -0
- meta_reports/migrations/0001_initial.py +87 -0
- meta_reports/migrations/0002_patienthistorymissingbaselinecd4_and_more.py +64 -0
- meta_reports/migrations/0003_auto_20240618_0505.py +12 -0
- meta_reports/migrations/0004_alter_patienthistorymissingbaselinecd4_table.py +17 -0
- meta_reports/migrations/0005_endpoints.py +47 -0
- meta_reports/migrations/0006_endpoints_baseline_datetime.py +18 -0
- meta_reports/migrations/0007_alter_endpoints_endpoint_label_and_more.py +43 -0
- meta_reports/migrations/0008_alter_endpoints_endpoint_label.py +18 -0
- meta_reports/migrations/0009_alter_endpoints_options.py +21 -0
- meta_reports/migrations/0010_alter_patienthistorymissingbaselinecd4_options_and_more.py +49 -0
- meta_reports/migrations/0011_auto_20240813_0156.py +54 -0
- meta_reports/migrations/0012_auto_20240813_1516.py +48 -0
- meta_reports/migrations/0013_auto_20240813_1516.py +48 -0
- meta_reports/migrations/0014_auto_20240813_1517.py +48 -0
- meta_reports/migrations/0015_alter_endpoints_site.py +22 -0
- meta_reports/migrations/0016_missingscreeningogtt.py +47 -0
- meta_reports/migrations/0017_auto_20240819_1711.py +166 -0
- meta_reports/migrations/0018_auto_20240819_1713.py +54 -0
- meta_reports/migrations/0019_auto_20240819_1721.py +54 -0
- meta_reports/migrations/0020_auto_20240819_1811.py +54 -0
- meta_reports/migrations/0021_auto_20240819_1817.py +54 -0
- meta_reports/migrations/0022_auto_20240819_1832.py +54 -0
- meta_reports/migrations/0023_endpoints_meta_report_subject_a56b22_idx.py +20 -0
- meta_reports/migrations/0024_glucosesummary.py +38 -0
- meta_reports/migrations/0025_auto_20240822_0115.py +87 -0
- meta_reports/migrations/0026_auto_20240822_0120.py +54 -0
- meta_reports/migrations/0027_auto_20240822_0140.py +54 -0
- meta_reports/migrations/0028_alter_glucosesummary_options.py +22 -0
- meta_reports/migrations/0029_auto_20240822_0149.py +54 -0
- meta_reports/migrations/0030_auto_20240822_1637.py +54 -0
- meta_reports/migrations/0031_endpointsproxy.py +25 -0
- meta_reports/migrations/0032_alter_endpointsproxy_options.py +21 -0
- meta_reports/migrations/0033_auto_20240823_0012.py +54 -0
- meta_reports/migrations/0034_auto_20240823_1642.py +54 -0
- meta_reports/migrations/0035_historicalmissingogttnote_missingogttnote.py +457 -0
- meta_reports/migrations/0036_historicalmissingogttnote_fasting_and_more.py +86 -0
- meta_reports/migrations/0037_historicalmissingogttnote_result_status_and_more.py +51 -0
- meta_reports/migrations/0038_alter_historicalmissingogttnote_fasting_and_more.py +33 -0
- meta_reports/migrations/0039_onstudymissingvalues.py +44 -0
- meta_reports/migrations/0040_auto_20240824_0412.py +282 -0
- meta_reports/migrations/0041_auto_20240828_2229.py +14 -0
- meta_reports/migrations/0042_onstudymissinglabvalues.py +43 -0
- meta_reports/migrations/0043_auto_20240828_2309.py +88 -0
- meta_reports/migrations/0044_auto_20240828_2323.py +93 -0
- meta_reports/migrations/0045_auto_20240829_0248.py +54 -0
- meta_reports/migrations/0046_auto_20240829_0250.py +54 -0
- meta_reports/migrations/0047_impsubstitutions.py +56 -0
- meta_reports/migrations/0048_auto_20240909_2338.py +48 -0
- meta_reports/migrations/0049_auto_20240911_0327.py +54 -0
- meta_reports/migrations/0050_alter_endpoints_created.py +19 -0
- meta_reports/migrations/0051_remove_endpoints_baseline_datetime_and_more.py +40 -0
- meta_reports/migrations/0052_lastimpvisit.py +57 -0
- meta_reports/migrations/0053_rename_lastimpvisit_lastimprefill_and_more.py +31 -0
- meta_reports/models/__init__.py +16 -0
- meta_reports/models/dbviews/README +14 -0
- meta_reports/models/dbviews/__init__.py +9 -0
- meta_reports/models/dbviews/glucose_summary/__init__.py +2 -0
- meta_reports/models/dbviews/glucose_summary/unmanaged_model.py +35 -0
- meta_reports/models/dbviews/glucose_summary/view_definition.py +28 -0
- meta_reports/models/dbviews/imp_substitutions/__init__.py +1 -0
- meta_reports/models/dbviews/imp_substitutions/unmanaged_model.py +41 -0
- meta_reports/models/dbviews/imp_substitutions/view_definition.py +21 -0
- meta_reports/models/dbviews/missing_screening_ogtt/__init__.py +2 -0
- meta_reports/models/dbviews/missing_screening_ogtt/note_model.py +57 -0
- meta_reports/models/dbviews/missing_screening_ogtt/unmanaged_model.py +41 -0
- meta_reports/models/dbviews/missing_screening_ogtt/view_definition.py +20 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/__init__.py +1 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/qa_cases.py +53 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/unmanged_model.py +20 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/view_definition.py +17 -0
- meta_reports/models/dbviews/on_study_missing_values/__init__.py +1 -0
- meta_reports/models/dbviews/on_study_missing_values/qa_cases.py +54 -0
- meta_reports/models/dbviews/on_study_missing_values/unmanged_model.py +20 -0
- meta_reports/models/dbviews/on_study_missing_values/view_definition.py +17 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/__init__.py +1 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/unmanaged_model.py +31 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/view_definition.py +21 -0
- meta_reports/models/dbviews/unattended_three_in_row/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_three_in_row/unmanaged_model.py +29 -0
- meta_reports/models/dbviews/unattended_three_in_row/view_definition.py +31 -0
- meta_reports/models/dbviews/unattended_three_in_row2/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_three_in_row2/unmanaged_model.py +29 -0
- meta_reports/models/dbviews/unattended_three_in_row2/view_definition.py +50 -0
- meta_reports/models/dbviews/unattended_two_in_row/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_two_in_row/unmanaged_model.py +27 -0
- meta_reports/models/dbviews/unattended_two_in_row/view_definition.py +30 -0
- meta_reports/models/endpoints.py +31 -0
- meta_reports/models/endpoints_proxy.py +11 -0
- meta_reports/models/last_imp_refill.py +34 -0
- meta_reports/tasks.py +12 -0
- meta_reports/templates/meta_reports/columns/subject_identifier_column.html +1 -0
- meta_reports/templates/meta_reports/endpoints_all_change_list_note.html +12 -0
- meta_reports/templates/meta_reports/endpoints_change_list_note.html +12 -0
- meta_reports/tests/test_sql_gen.py +5 -0
- meta_reports/urls.py +8 -0
- meta_reports/utils.py +0 -0
- meta_screening/admin/subject_screening_admin.py +1 -0
- meta_screening/migrations/0067_alter_historicalscreeningpartone_report_datetime_and_more.py +84 -0
- meta_screening/tests/holidays.csv +1 -1
- meta_screening/tests/meta_test_case_mixin.py +15 -0
- meta_sites/tests/test_sites.py +1 -1
- meta_subject/action_items.py +2 -2
- meta_subject/admin/__init__.py +2 -1
- meta_subject/admin/birth_outcome_admin.py +2 -0
- meta_subject/admin/blood_results/__init__.py +1 -1
- meta_subject/admin/blood_results/{blood_results_lipid_admin.py → blood_results_lipids_admin.py} +7 -7
- meta_subject/admin/diabetes/__init__.py +1 -1
- meta_subject/admin/diabetes/dm_endpoint_admin.py +35 -0
- meta_subject/admin/glucose_fbg_admin.py +4 -0
- meta_subject/admin/other_arv_regimens_admin.py +2 -0
- meta_subject/admin/study_medication_admin.py +10 -0
- meta_subject/form_validators/__init__.py +1 -1
- meta_subject/form_validators/dm_endpoint_form_validator.py +35 -0
- meta_subject/forms/__init__.py +2 -2
- meta_subject/forms/blood_results/__init__.py +1 -1
- meta_subject/forms/blood_results/{blood_results_lipid_form.py → blood_results_lipids_form.py} +5 -5
- meta_subject/forms/diabetes/__init__.py +1 -2
- meta_subject/forms/diabetes/dm_endpoint_form.py +13 -0
- meta_subject/forms/study_medication_form.py +35 -0
- meta_subject/locale/lg/LC_MESSAGES/django.po +470 -0
- meta_subject/locale/sw/LC_MESSAGES/django.po +191 -89
- meta_subject/metadata_rules/metadata_rules.py +7 -0
- meta_subject/metadata_rules/predicates.py +45 -8
- meta_subject/migrations/0107_auto_20220415_0043.py +28 -22
- meta_subject/migrations/0126_auto_20220719_2142.py +4 -4
- meta_subject/migrations/0131_auto_20220722_0411.py +28 -23
- meta_subject/migrations/0132_auto_20220722_1825.py +10 -6
- meta_subject/migrations/0135_auto_20220722_2212.py +39 -35
- meta_subject/migrations/0150_auto_20220914_0039.py +15 -11
- meta_subject/migrations/0207_alter_historicalphysicalexam_waist_circumference_and_more.py +46 -0
- meta_subject/migrations/0208_birthoutcomes_crf_status_and_more.py +62 -0
- meta_subject/migrations/0209_remove_historicaldmdxresult_dm_diagnosis_and_more.py +37 -0
- meta_subject/migrations/0210_remove_dmdxresult_dm_diagnosis_and_more.py +123 -0
- meta_subject/migrations/0211_dmendpoint_endpoint_reached_and_more.py +45 -0
- meta_subject/migrations/0212_auto_20240827_2222.py +23 -0
- meta_subject/migrations/0213_rename_bloodresultslipid_bloodresultslipids_and_more.py +35 -0
- meta_subject/migrations/0214_historicalstudymedication_stock_codes_and_more.py +44 -0
- meta_subject/migrations/0215_alter_historicalstudymedication_stock_codes_and_more.py +46 -0
- meta_subject/model_mixins/arv_history_model_mixin.py +3 -3
- meta_subject/models/__init__.py +3 -2
- meta_subject/models/birth_outcomes.py +6 -1
- meta_subject/models/blood_results/__init__.py +1 -1
- meta_subject/models/blood_results/{blood_results_lipid.py → blood_results_lipids.py} +3 -3
- meta_subject/models/diabetes/__init__.py +1 -2
- meta_subject/models/diabetes/dm_endpoint.py +61 -0
- meta_subject/models/glucose.py +4 -1
- meta_subject/models/physical_exam.py +1 -0
- meta_subject/models/signals.py +19 -0
- meta_subject/models/todo.txt +1 -1
- meta_subject/static/meta_subject/slider.css +1 -1
- meta_subject/templates/meta_subject/endpoint_review_instructions.html +1 -1
- meta_subject/templates/meta_subject/widgets/slider.html +0 -1
- meta_subject/tests/holidays.csv +1 -1
- meta_subject/tests/tests/test_medication_adherence.py +5 -1
- meta_subject/tests/tests/test_metadata_rules.py +2 -2
- meta_subject/tests/tests/test_mnsi.py +212 -121
- meta_subject/tests/tests/test_sf12.py +0 -12
- meta_visit_schedule/constants.py +4 -0
- meta_visit_schedule/tests/tests/test_schedule.py +4 -0
- meta_visit_schedule/visit_schedules/phase_three/crfs.py +75 -13
- meta_visit_schedule/visit_schedules/phase_three/requisitions.py +12 -0
- meta_visit_schedule/visit_schedules/phase_three/schedule.py +65 -2
- meta_visit_schedule/visit_schedules/phase_three/schedule_dm_referral.py +1 -1
- tests/etc/randomization_list.csv +1 -1
- {meta_edc/tests → tests}/etc/randomization_list_phase_three.csv +4 -4
- tests/holidays.csv +1 -1
- {meta_edc/tests → tests}/test_settings.py +16 -6
- meta_edc/tests/etc/user-aes-local.key +0 -1
- meta_edc/tests/etc/user-aes-restricted.key +0 -0
- meta_edc/tests/etc/user-rsa-local-private.pem +0 -27
- meta_edc/tests/etc/user-rsa-local-public.pem +0 -9
- meta_edc/tests/etc/user-rsa-restricted-private.pem +0 -27
- meta_edc/tests/etc/user-rsa-restricted-public.pem +0 -9
- meta_edc/tests/etc/user-salt-local.key +0 -0
- meta_edc/tests/etc/user-salt-restricted.key +0 -0
- meta_edc-0.3.15.dist-info/METADATA +0 -88
- meta_reports/tests/holidays.csv +0 -15
- meta_subject/admin/diabetes/dm_diagnosis_admin.py +0 -89
- meta_subject/form_validators/dm_diagnosis_form_validator.py +0 -38
- meta_subject/form_validators/dm_dx_result_form_validator.py +0 -7
- meta_subject/forms/diabetes/dm_diagnosis_form.py +0 -13
- meta_subject/forms/diabetes/dm_dx_result_form.py +0 -11
- meta_subject/models/diabetes/dm_diagnosis.py +0 -50
- meta_subject/models/diabetes/dm_dx_result.py +0 -70
- /meta_edc-0.3.15.dist-info/AUTHORS → /meta_analytics/__init__.py +0 -0
- /meta_pharmacy/models.py → /meta_analytics/constants.py +0 -0
- /meta_reports/models.py → /meta_analytics/notebooks/cleaning/__init__.py +0 -0
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/LICENSE +0 -0
@@ -0,0 +1,48 @@
|
|
1
|
+
# Generated by Django 5.0.7 on 2024-08-13 12:16
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
|
+
|
8
|
+
class Migration(migrations.Migration):
|
9
|
+
|
10
|
+
dependencies = [
|
11
|
+
("meta_reports", "0011_auto_20240813_0156"),
|
12
|
+
]
|
13
|
+
|
14
|
+
operations = [
|
15
|
+
django_db_views.operations.ViewRunPython(
|
16
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
17
|
+
"select *, uuid() as id, now() as created, 'meta_reports.unattendedthreeinrow' as `report_model` from (\n select subject_identifier, site_id, appt_datetime, `first_value`, `second_value`, `third_value`,\n datediff(third_date, first_date) as `interval_days`,\n datediff(now(), first_date) as `from_now_days`\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as `first_value`,\n NTH_VALUE(visit_code, 2) OVER w as `second_value`,\n NTH_VALUE(visit_code, 3) OVER w as `third_value`,\n FIRST_VALUE(appt_datetime) OVER w as `first_date`,\n NTH_VALUE(appt_datetime, 3) OVER w as `third_date`\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where `second_value` is not null and `third_value` is not null\n ) as B\n order by site_id, from_now_days desc",
|
18
|
+
"unattended_three_in_row_view",
|
19
|
+
engine="django.db.backends.mysql",
|
20
|
+
),
|
21
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
22
|
+
"", "unattended_three_in_row_view", engine="django.db.backends.mysql"
|
23
|
+
),
|
24
|
+
atomic=False,
|
25
|
+
),
|
26
|
+
django_db_views.operations.ViewRunPython(
|
27
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
28
|
+
"select *, gen_random_uuid() as id, now() as created, \n 'meta_reports.unattendedthreeinrow' as report_model \n from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days \n from (\n select subject_identifier,site_id,appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 3) OVER w as third_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n ) as B\n order by site_id, from_now_days desc",
|
29
|
+
"unattended_three_in_row_view",
|
30
|
+
engine="django.db.backends.postgresql",
|
31
|
+
),
|
32
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
33
|
+
"", "unattended_three_in_row_view", engine="django.db.backends.postgresql"
|
34
|
+
),
|
35
|
+
atomic=False,
|
36
|
+
),
|
37
|
+
django_db_views.operations.ViewRunPython(
|
38
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
39
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created,'meta_reports.unattendedthreeinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS Integer) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer) as from_now_days\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 3) OVER w as third_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= datetime()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n ) as B\n order by site_id, from_now_days desc",
|
40
|
+
"unattended_three_in_row_view",
|
41
|
+
engine="django.db.backends.sqlite3",
|
42
|
+
),
|
43
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
44
|
+
"", "unattended_three_in_row_view", engine="django.db.backends.sqlite3"
|
45
|
+
),
|
46
|
+
atomic=False,
|
47
|
+
),
|
48
|
+
]
|
@@ -0,0 +1,48 @@
|
|
1
|
+
# Generated by Django 5.0.7 on 2024-08-13 12:16
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
|
+
|
8
|
+
class Migration(migrations.Migration):
|
9
|
+
|
10
|
+
dependencies = [
|
11
|
+
("meta_reports", "0012_auto_20240813_1516"),
|
12
|
+
]
|
13
|
+
|
14
|
+
operations = [
|
15
|
+
django_db_views.operations.ViewRunPython(
|
16
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
17
|
+
"with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as `appt_status`,\n case when appt_timing='missed' then 1 else 0 end as `missed`\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n select *, uuid() as `id`, now() as `created`, 'meta_reports.unattendedthreeinrow2' as `report_model` from (\n select distinct subject_identifier, site_id, `first_value`, `second_value`, `third_value`,\n datediff(third_date, first_date) as `interval_days`,\n datediff(now(), first_date) as `from_now_days`,\n `first_status`, `second_status`, `third_status`, sum(missed) as `missed_count`\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as `third_status`,\n NTH_VALUE(appt_status, 2) OVER w as `second_status`,\n NTH_VALUE(appt_status, 3) OVER w as `first_status`,\n FIRST_VALUE(visit_code) OVER w as `third_value`,\n NTH_VALUE(visit_code, 2) OVER w as `second_value`,\n NTH_VALUE(visit_code, 3) OVER w as `first_value`,\n FIRST_VALUE(appt_datetime) OVER w as `third_date`,\n NTH_VALUE(appt_datetime, 2) OVER w as `second_date`,\n NTH_VALUE(appt_datetime, 3) OVER w as `first_date`\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where `second_value` is not null and `third_value` is not null\n and `first_status`='New'\n and `second_status`='New'\n and `third_status`='New'\n group by subject_identifier, site_id, `first_value`, `second_value`, `third_value`,\n datediff(`third_date`, `first_date`),\n datediff(now(), `first_date`),\n `first_status`, `second_status`, `third_status`\n order by subject_identifier, site_id\n ) as B",
|
18
|
+
"unattended_three_in_row2_view",
|
19
|
+
engine="django.db.backends.mysql",
|
20
|
+
),
|
21
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
22
|
+
"", "unattended_three_in_row2_view", engine="django.db.backends.mysql"
|
23
|
+
),
|
24
|
+
atomic=False,
|
25
|
+
),
|
26
|
+
django_db_views.operations.ViewRunPython(
|
27
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
28
|
+
"with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as appt_status,\n case when appt_timing='missed' then 1 else 0 end as missed\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n select *, gen_random_uuid() as id, now() as created, 'meta_reports.unattendedthreeinrow2' as report_model \n from (\n select distinct subject_identifier, site_id, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days,\n first_status, second_status, third_status, sum(missed) as missed_count\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as third_status,\n NTH_VALUE(appt_status, 2) OVER w as second_status,\n NTH_VALUE(appt_status, 3) OVER w as first_status,\n FIRST_VALUE(visit_code) OVER w as third_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as first_value,\n FIRST_VALUE(appt_datetime) OVER w as third_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date,\n NTH_VALUE(appt_datetime, 3) OVER w as first_date\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n and first_status='New'\n and second_status='New'\n and third_status='New'\n group by subject_identifier, site_id, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date),\n EXTRACT(DAY FROM now() - first_date),\n first_status, second_status, third_status\n order by subject_identifier, site_id\n ) as B",
|
29
|
+
"unattended_three_in_row2_view",
|
30
|
+
engine="django.db.backends.postgresql",
|
31
|
+
),
|
32
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
33
|
+
"", "unattended_three_in_row2_view", engine="django.db.backends.postgresql"
|
34
|
+
),
|
35
|
+
atomic=False,
|
36
|
+
),
|
37
|
+
django_db_views.operations.ViewRunPython(
|
38
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
39
|
+
"with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as `appt_status`,\n case when appt_timing='missed' then 1 else 0 end as `missed`\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created, 'meta_reports.unattendedthreeinrow2' as report_model from (\n select distinct subject_identifier, site_id, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS Integer) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer) as from_now_days,\n first_status, second_status, third_status, sum(missed) as missed_count\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as third_status,\n NTH_VALUE(appt_status, 2) OVER w as second_status,\n NTH_VALUE(appt_status, 3) OVER w as first_status,\n FIRST_VALUE(visit_code) OVER w as third_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as first_value,\n FIRST_VALUE(appt_datetime) OVER w as third_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date,\n NTH_VALUE(appt_datetime, 3) OVER w as first_date\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n and first_status='New'\n and second_status='New'\n and third_status='New'\n group by subject_identifier, site_id, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS Integer),\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer),\n first_status, second_status, third_status\n order by subject_identifier, site_id\n ) as B",
|
40
|
+
"unattended_three_in_row2_view",
|
41
|
+
engine="django.db.backends.sqlite3",
|
42
|
+
),
|
43
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
44
|
+
"", "unattended_three_in_row2_view", engine="django.db.backends.sqlite3"
|
45
|
+
),
|
46
|
+
atomic=False,
|
47
|
+
),
|
48
|
+
]
|
@@ -0,0 +1,48 @@
|
|
1
|
+
# Generated by Django 5.0.7 on 2024-08-13 12:17
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
|
+
|
8
|
+
class Migration(migrations.Migration):
|
9
|
+
|
10
|
+
dependencies = [
|
11
|
+
("meta_reports", "0013_auto_20240813_1516"),
|
12
|
+
]
|
13
|
+
|
14
|
+
operations = [
|
15
|
+
django_db_views.operations.ViewRunPython(
|
16
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
17
|
+
"select *, uuid() as `id`, now() as `created`, 'meta_reports.unattendedtwoinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, `first_value`, `second_value`,\n datediff(`second_date`, `first_date`) as `interval_days`,\n datediff(now(), `first_date`) as `from_now_days`\n from (\n select subject_identifier ,site_id, appt_datetime,\n FIRST_VALUE(`visit_code`) OVER w as `first_value`,\n NTH_VALUE(`visit_code`, 2) OVER w as `second_value`,\n NTH_VALUE(`visit_code`, 3) OVER w as `third_value`,\n FIRST_VALUE(`appt_datetime`) OVER w as `first_date`,\n NTH_VALUE(`appt_datetime`, 2) OVER w as `second_date`\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where `second_value` is not null and `third_value` is null\n ) as A2\n order by site_id, `from_now_days` desc",
|
18
|
+
"unattended_two_in_row_view",
|
19
|
+
engine="django.db.backends.mysql",
|
20
|
+
),
|
21
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
22
|
+
"", "unattended_two_in_row_view", engine="django.db.backends.mysql"
|
23
|
+
),
|
24
|
+
atomic=False,
|
25
|
+
),
|
26
|
+
django_db_views.operations.ViewRunPython(
|
27
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
28
|
+
"select *, gen_random_uuid() as id, now() as created, 'meta_reports.unattendedtwoinrow' as report_model \n from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value,\n EXTRACT(DAY FROM second_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where second_value is not null and third_value is null\n ) as A2\n order by site_id, from_now_days desc",
|
29
|
+
"unattended_two_in_row_view",
|
30
|
+
engine="django.db.backends.postgresql",
|
31
|
+
),
|
32
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
33
|
+
"", "unattended_two_in_row_view", engine="django.db.backends.postgresql"
|
34
|
+
),
|
35
|
+
atomic=False,
|
36
|
+
),
|
37
|
+
django_db_views.operations.ViewRunPython(
|
38
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
39
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created, 'meta_reports.unattendedtwoinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value,\n CAST(JulianDay(second_date) - JulianDay(first_date) AS Integer) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer) as from_now_days\n from (\n select subject_identifier ,site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= datetime()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where second_value is not null and third_value is null\n ) as A2\n order by site_id, from_now_days desc",
|
40
|
+
"unattended_two_in_row_view",
|
41
|
+
engine="django.db.backends.sqlite3",
|
42
|
+
),
|
43
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
44
|
+
"", "unattended_two_in_row_view", engine="django.db.backends.sqlite3"
|
45
|
+
),
|
46
|
+
atomic=False,
|
47
|
+
),
|
48
|
+
]
|
@@ -0,0 +1,22 @@
|
|
1
|
+
# Generated by Django 5.1 on 2024-08-15 23:39
|
2
|
+
|
3
|
+
import django.db.models.deletion
|
4
|
+
from django.db import migrations, models
|
5
|
+
|
6
|
+
|
7
|
+
class Migration(migrations.Migration):
|
8
|
+
|
9
|
+
dependencies = [
|
10
|
+
("meta_reports", "0014_auto_20240813_1517"),
|
11
|
+
("sites", "0002_alter_domain_unique"),
|
12
|
+
]
|
13
|
+
|
14
|
+
operations = [
|
15
|
+
migrations.AlterField(
|
16
|
+
model_name="endpoints",
|
17
|
+
name="site",
|
18
|
+
field=models.ForeignKey(
|
19
|
+
on_delete=django.db.models.deletion.DO_NOTHING, to="sites.site"
|
20
|
+
),
|
21
|
+
),
|
22
|
+
]
|
@@ -0,0 +1,47 @@
|
|
1
|
+
# Generated by Django 5.1 on 2024-08-19 14:01
|
2
|
+
|
3
|
+
from django.db import migrations, models
|
4
|
+
|
5
|
+
|
6
|
+
class Migration(migrations.Migration):
|
7
|
+
|
8
|
+
dependencies = [
|
9
|
+
("meta_reports", "0015_alter_endpoints_site"),
|
10
|
+
]
|
11
|
+
|
12
|
+
operations = [
|
13
|
+
migrations.CreateModel(
|
14
|
+
name="MissingScreeningOgtt",
|
15
|
+
fields=[
|
16
|
+
(
|
17
|
+
"id",
|
18
|
+
models.BigAutoField(
|
19
|
+
auto_created=True, primary_key=True, serialize=False, verbose_name="ID"
|
20
|
+
),
|
21
|
+
),
|
22
|
+
("report_model", models.CharField(max_length=50)),
|
23
|
+
("subject_identifier", models.CharField(max_length=25)),
|
24
|
+
("created", models.DateTimeField()),
|
25
|
+
("screening_identifier", models.CharField(max_length=25)),
|
26
|
+
("screening_datetime", models.DateTimeField(null=True)),
|
27
|
+
("fbg_datetime", models.DateTimeField(null=True)),
|
28
|
+
("fbg_value", models.DecimalField(decimal_places=2, max_digits=8, null=True)),
|
29
|
+
("ogtt_value", models.DecimalField(decimal_places=2, max_digits=8, null=True)),
|
30
|
+
("fbg2_value", models.DecimalField(decimal_places=2, max_digits=8, null=True)),
|
31
|
+
(
|
32
|
+
"ogtt2_value",
|
33
|
+
models.DecimalField(decimal_places=2, max_digits=8, null=True),
|
34
|
+
),
|
35
|
+
("fbg2_datetime", models.DateTimeField(null=True)),
|
36
|
+
("ogtt2_datetime", models.DateTimeField(null=True)),
|
37
|
+
("consented", models.BooleanField(null=True)),
|
38
|
+
],
|
39
|
+
options={
|
40
|
+
"verbose_name": "Screening: Missing OGTT",
|
41
|
+
"verbose_name_plural": "Screening: Missing OGTT",
|
42
|
+
"db_table": "missing_screening_ogtt_view",
|
43
|
+
"managed": False,
|
44
|
+
"default_permissions": ("view", "export", "viewallsites"),
|
45
|
+
},
|
46
|
+
),
|
47
|
+
]
|
@@ -0,0 +1,166 @@
|
|
1
|
+
# Generated by Django 5.1 on 2024-08-19 14:11
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
|
+
|
8
|
+
class Migration(migrations.Migration):
|
9
|
+
|
10
|
+
dependencies = [
|
11
|
+
("meta_reports", "0016_missingscreeningogtt"),
|
12
|
+
("meta_screening", "0067_alter_historicalscreeningpartone_report_datetime_and_more"),
|
13
|
+
]
|
14
|
+
|
15
|
+
operations = [
|
16
|
+
django_db_views.operations.ViewRunPython(
|
17
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
18
|
+
"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented \n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
19
|
+
"missing_screening_ogtt_view",
|
20
|
+
engine="django.db.backends.mysql",
|
21
|
+
),
|
22
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
23
|
+
"", "missing_screening_ogtt_view", engine="django.db.backends.mysql"
|
24
|
+
),
|
25
|
+
atomic=False,
|
26
|
+
),
|
27
|
+
django_db_views.operations.ViewRunPython(
|
28
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
29
|
+
"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented \n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
30
|
+
"missing_screening_ogtt_view",
|
31
|
+
engine="django.db.backends.postgresql",
|
32
|
+
),
|
33
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
34
|
+
"", "missing_screening_ogtt_view", engine="django.db.backends.postgresql"
|
35
|
+
),
|
36
|
+
atomic=False,
|
37
|
+
),
|
38
|
+
django_db_views.operations.ViewRunPython(
|
39
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
40
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented \n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
41
|
+
"missing_screening_ogtt_view",
|
42
|
+
engine="django.db.backends.sqlite3",
|
43
|
+
),
|
44
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
45
|
+
"", "missing_screening_ogtt_view", engine="django.db.backends.sqlite3"
|
46
|
+
),
|
47
|
+
atomic=False,
|
48
|
+
),
|
49
|
+
django_db_views.operations.ViewRunPython(
|
50
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
51
|
+
"# noqa\n select *, uuid() as id, now() as created, 'meta_reports.unattendedthreeinrow' as `report_model` from (\n select subject_identifier, site_id, appt_datetime, `first_value`, `second_value`, `third_value`,\n datediff(third_date, first_date) as `interval_days`,\n datediff(now(), first_date) as `from_now_days`\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as `first_value`,\n NTH_VALUE(visit_code, 2) OVER w as `second_value`,\n NTH_VALUE(visit_code, 3) OVER w as `third_value`,\n FIRST_VALUE(appt_datetime) OVER w as `first_date`,\n NTH_VALUE(appt_datetime, 3) OVER w as `third_date`\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where `second_value` is not null and `third_value` is not null\n ) as B\n order by site_id, from_now_days desc",
|
52
|
+
"unattended_three_in_row_view",
|
53
|
+
engine="django.db.backends.mysql",
|
54
|
+
),
|
55
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
56
|
+
"select *, uuid() as id, now() as created, 'meta_reports.unattendedthreeinrow' as `report_model` from (\n select subject_identifier, site_id, appt_datetime, `first_value`, `second_value`, `third_value`,\n datediff(third_date, first_date) as `interval_days`,\n datediff(now(), first_date) as `from_now_days`\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as `first_value`,\n NTH_VALUE(visit_code, 2) OVER w as `second_value`,\n NTH_VALUE(visit_code, 3) OVER w as `third_value`,\n FIRST_VALUE(appt_datetime) OVER w as `first_date`,\n NTH_VALUE(appt_datetime, 3) OVER w as `third_date`\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where `second_value` is not null and `third_value` is not null\n ) as B\n order by site_id, from_now_days desc",
|
57
|
+
"unattended_three_in_row_view",
|
58
|
+
engine="django.db.backends.mysql",
|
59
|
+
),
|
60
|
+
atomic=False,
|
61
|
+
),
|
62
|
+
django_db_views.operations.ViewRunPython(
|
63
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
64
|
+
"# noqa\n select *, gen_random_uuid() as id, now() as created,\n 'meta_reports.unattendedthreeinrow' as report_model\n from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days\n from (\n select subject_identifier,site_id,appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 3) OVER w as third_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n ) as B\n order by site_id, from_now_days desc",
|
65
|
+
"unattended_three_in_row_view",
|
66
|
+
engine="django.db.backends.postgresql",
|
67
|
+
),
|
68
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
69
|
+
"select *, gen_random_uuid() as id, now() as created, \n 'meta_reports.unattendedthreeinrow' as report_model \n from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days \n from (\n select subject_identifier,site_id,appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 3) OVER w as third_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n ) as B\n order by site_id, from_now_days desc",
|
70
|
+
"unattended_three_in_row_view",
|
71
|
+
engine="django.db.backends.postgresql",
|
72
|
+
),
|
73
|
+
atomic=False,
|
74
|
+
),
|
75
|
+
django_db_views.operations.ViewRunPython(
|
76
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
77
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created,'meta_reports.unattendedthreeinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS INTEGER) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS INTEGER) as from_now_days\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 3) OVER w as third_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= datetime()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n ) as B\n order by site_id, from_now_days desc",
|
78
|
+
"unattended_three_in_row_view",
|
79
|
+
engine="django.db.backends.sqlite3",
|
80
|
+
),
|
81
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
82
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created,'meta_reports.unattendedthreeinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS Integer) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer) as from_now_days\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 3) OVER w as third_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= datetime()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n ) as B\n order by site_id, from_now_days desc",
|
83
|
+
"unattended_three_in_row_view",
|
84
|
+
engine="django.db.backends.sqlite3",
|
85
|
+
),
|
86
|
+
atomic=False,
|
87
|
+
),
|
88
|
+
django_db_views.operations.ViewRunPython(
|
89
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
90
|
+
"# noqa\n with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as `appt_status`,\n case when appt_timing='missed' then 1 else 0 end as `missed`\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n select *, uuid() as `id`, now() as `created`, 'meta_reports.unattendedthreeinrow2' as `report_model` from (\n select distinct subject_identifier, site_id, `first_value`, `second_value`, `third_value`,\n datediff(third_date, first_date) as `interval_days`,\n datediff(now(), first_date) as `from_now_days`,\n `first_status`, `second_status`, `third_status`, sum(missed) as `missed_count`\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as `third_status`,\n NTH_VALUE(appt_status, 2) OVER w as `second_status`,\n NTH_VALUE(appt_status, 3) OVER w as `first_status`,\n FIRST_VALUE(visit_code) OVER w as `third_value`,\n NTH_VALUE(visit_code, 2) OVER w as `second_value`,\n NTH_VALUE(visit_code, 3) OVER w as `first_value`,\n FIRST_VALUE(appt_datetime) OVER w as `third_date`,\n NTH_VALUE(appt_datetime, 2) OVER w as `second_date`,\n NTH_VALUE(appt_datetime, 3) OVER w as `first_date`\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where `second_value` is not null and `third_value` is not null\n and `first_status`='New'\n and `second_status`='New'\n and `third_status`='New'\n group by subject_identifier, site_id, `first_value`, `second_value`, `third_value`,\n datediff(`third_date`, `first_date`),\n datediff(now(), `first_date`),\n `first_status`, `second_status`, `third_status`\n order by subject_identifier, site_id\n ) as B",
|
91
|
+
"unattended_three_in_row2_view",
|
92
|
+
engine="django.db.backends.mysql",
|
93
|
+
),
|
94
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
95
|
+
"with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as `appt_status`,\n case when appt_timing='missed' then 1 else 0 end as `missed`\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n select *, uuid() as `id`, now() as `created`, 'meta_reports.unattendedthreeinrow2' as `report_model` from (\n select distinct subject_identifier, site_id, `first_value`, `second_value`, `third_value`,\n datediff(third_date, first_date) as `interval_days`,\n datediff(now(), first_date) as `from_now_days`,\n `first_status`, `second_status`, `third_status`, sum(missed) as `missed_count`\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as `third_status`,\n NTH_VALUE(appt_status, 2) OVER w as `second_status`,\n NTH_VALUE(appt_status, 3) OVER w as `first_status`,\n FIRST_VALUE(visit_code) OVER w as `third_value`,\n NTH_VALUE(visit_code, 2) OVER w as `second_value`,\n NTH_VALUE(visit_code, 3) OVER w as `first_value`,\n FIRST_VALUE(appt_datetime) OVER w as `third_date`,\n NTH_VALUE(appt_datetime, 2) OVER w as `second_date`,\n NTH_VALUE(appt_datetime, 3) OVER w as `first_date`\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where `second_value` is not null and `third_value` is not null\n and `first_status`='New'\n and `second_status`='New'\n and `third_status`='New'\n group by subject_identifier, site_id, `first_value`, `second_value`, `third_value`,\n datediff(`third_date`, `first_date`),\n datediff(now(), `first_date`),\n `first_status`, `second_status`, `third_status`\n order by subject_identifier, site_id\n ) as B",
|
96
|
+
"unattended_three_in_row2_view",
|
97
|
+
engine="django.db.backends.mysql",
|
98
|
+
),
|
99
|
+
atomic=False,
|
100
|
+
),
|
101
|
+
django_db_views.operations.ViewRunPython(
|
102
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
103
|
+
"# noqa\n with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as appt_status,\n case when appt_timing='missed' then 1 else 0 end as missed\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n select *, gen_random_uuid() as id, now() as created, 'meta_reports.unattendedthreeinrow2' as report_model\n from (\n select distinct subject_identifier, site_id, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days,\n first_status, second_status, third_status, sum(missed) as missed_count\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as third_status,\n NTH_VALUE(appt_status, 2) OVER w as second_status,\n NTH_VALUE(appt_status, 3) OVER w as first_status,\n FIRST_VALUE(visit_code) OVER w as third_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as first_value,\n FIRST_VALUE(appt_datetime) OVER w as third_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date,\n NTH_VALUE(appt_datetime, 3) OVER w as first_date\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n and first_status='New'\n and second_status='New'\n and third_status='New'\n group by subject_identifier, site_id, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date),\n EXTRACT(DAY FROM now() - first_date),\n first_status, second_status, third_status\n order by subject_identifier, site_id\n ) as B",
|
104
|
+
"unattended_three_in_row2_view",
|
105
|
+
engine="django.db.backends.postgresql",
|
106
|
+
),
|
107
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
108
|
+
"with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as appt_status,\n case when appt_timing='missed' then 1 else 0 end as missed\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n select *, gen_random_uuid() as id, now() as created, 'meta_reports.unattendedthreeinrow2' as report_model \n from (\n select distinct subject_identifier, site_id, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days,\n first_status, second_status, third_status, sum(missed) as missed_count\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as third_status,\n NTH_VALUE(appt_status, 2) OVER w as second_status,\n NTH_VALUE(appt_status, 3) OVER w as first_status,\n FIRST_VALUE(visit_code) OVER w as third_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as first_value,\n FIRST_VALUE(appt_datetime) OVER w as third_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date,\n NTH_VALUE(appt_datetime, 3) OVER w as first_date\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n and first_status='New'\n and second_status='New'\n and third_status='New'\n group by subject_identifier, site_id, first_value, second_value, third_value,\n EXTRACT(DAY FROM third_date - first_date),\n EXTRACT(DAY FROM now() - first_date),\n first_status, second_status, third_status\n order by subject_identifier, site_id\n ) as B",
|
109
|
+
"unattended_three_in_row2_view",
|
110
|
+
engine="django.db.backends.postgresql",
|
111
|
+
),
|
112
|
+
atomic=False,
|
113
|
+
),
|
114
|
+
django_db_views.operations.ViewRunPython(
|
115
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
116
|
+
"# noqa\n with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as `appt_status`,\n case when appt_timing='missed' then 1 else 0 end as `missed`\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created, 'meta_reports.unattendedthreeinrow2' as report_model from (\n select distinct subject_identifier, site_id, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS Integer) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer) as from_now_days,\n first_status, second_status, third_status, sum(missed) as missed_count\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as third_status,\n NTH_VALUE(appt_status, 2) OVER w as second_status,\n NTH_VALUE(appt_status, 3) OVER w as first_status,\n FIRST_VALUE(visit_code) OVER w as third_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as first_value,\n FIRST_VALUE(appt_datetime) OVER w as third_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date,\n NTH_VALUE(appt_datetime, 3) OVER w as first_date\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n and first_status='New'\n and second_status='New'\n and third_status='New'\n group by subject_identifier, site_id, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS Integer),\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer),\n first_status, second_status, third_status\n order by subject_identifier, site_id\n ) as B",
|
117
|
+
"unattended_three_in_row2_view",
|
118
|
+
engine="django.db.backends.sqlite3",
|
119
|
+
),
|
120
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
121
|
+
"with appointments as (\n select subject_identifier, site_id, visit_code, visit_code_sequence, appt_datetime,\n case when appt_timing='missed' then 'New' else appt_status end as `appt_status`,\n case when appt_timing='missed' then 1 else 0 end as `missed`\n from edc_appointment_appointment\n where visit_code_sequence=0 and appt_datetime<=now()\n order by subject_identifier, appt_datetime\n )\n SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created, 'meta_reports.unattendedthreeinrow2' as report_model from (\n select distinct subject_identifier, site_id, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS Integer) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer) as from_now_days,\n first_status, second_status, third_status, sum(missed) as missed_count\n from (\n select subject_identifier,site_id,appt_datetime, missed,\n FIRST_VALUE(appt_status) OVER w as third_status,\n NTH_VALUE(appt_status, 2) OVER w as second_status,\n NTH_VALUE(appt_status, 3) OVER w as first_status,\n FIRST_VALUE(visit_code) OVER w as third_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as first_value,\n FIRST_VALUE(appt_datetime) OVER w as third_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date,\n NTH_VALUE(appt_datetime, 3) OVER w as first_date\n from appointments\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime desc ROWS UNBOUNDED PRECEDING)\n ) as A\n where second_value is not null and third_value is not null\n and first_status='New'\n and second_status='New'\n and third_status='New'\n group by subject_identifier, site_id, first_value, second_value, third_value,\n CAST(JulianDay(third_date) - JulianDay(first_date) AS Integer),\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer),\n first_status, second_status, third_status\n order by subject_identifier, site_id\n ) as B",
|
122
|
+
"unattended_three_in_row2_view",
|
123
|
+
engine="django.db.backends.sqlite3",
|
124
|
+
),
|
125
|
+
atomic=False,
|
126
|
+
),
|
127
|
+
django_db_views.operations.ViewRunPython(
|
128
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
129
|
+
"# noqa\n select *, uuid() as `id`, now() as `created`, 'meta_reports.unattendedtwoinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, `first_value`, `second_value`,\n datediff(`second_date`, `first_date`) as `interval_days`,\n datediff(now(), `first_date`) as `from_now_days`\n from (\n select subject_identifier ,site_id, appt_datetime,\n FIRST_VALUE(`visit_code`) OVER w as `first_value`,\n NTH_VALUE(`visit_code`, 2) OVER w as `second_value`,\n NTH_VALUE(`visit_code`, 3) OVER w as `third_value`,\n FIRST_VALUE(`appt_datetime`) OVER w as `first_date`,\n NTH_VALUE(`appt_datetime`, 2) OVER w as `second_date`\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where `second_value` is not null and `third_value` is null\n ) as A2\n order by site_id, `from_now_days` desc",
|
130
|
+
"unattended_two_in_row_view",
|
131
|
+
engine="django.db.backends.mysql",
|
132
|
+
),
|
133
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
134
|
+
"select *, uuid() as `id`, now() as `created`, 'meta_reports.unattendedtwoinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, `first_value`, `second_value`,\n datediff(`second_date`, `first_date`) as `interval_days`,\n datediff(now(), `first_date`) as `from_now_days`\n from (\n select subject_identifier ,site_id, appt_datetime,\n FIRST_VALUE(`visit_code`) OVER w as `first_value`,\n NTH_VALUE(`visit_code`, 2) OVER w as `second_value`,\n NTH_VALUE(`visit_code`, 3) OVER w as `third_value`,\n FIRST_VALUE(`appt_datetime`) OVER w as `first_date`,\n NTH_VALUE(`appt_datetime`, 2) OVER w as `second_date`\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where `second_value` is not null and `third_value` is null\n ) as A2\n order by site_id, `from_now_days` desc",
|
135
|
+
"unattended_two_in_row_view",
|
136
|
+
engine="django.db.backends.mysql",
|
137
|
+
),
|
138
|
+
atomic=False,
|
139
|
+
),
|
140
|
+
django_db_views.operations.ViewRunPython(
|
141
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
142
|
+
"# noqa\n select *, gen_random_uuid() as id, now() as created, 'meta_reports.unattendedtwoinrow' as report_model\n from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value,\n EXTRACT(DAY FROM second_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where second_value is not null and third_value is null\n ) as A2\n order by site_id, from_now_days desc",
|
143
|
+
"unattended_two_in_row_view",
|
144
|
+
engine="django.db.backends.postgresql",
|
145
|
+
),
|
146
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
147
|
+
"select *, gen_random_uuid() as id, now() as created, 'meta_reports.unattendedtwoinrow' as report_model \n from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value,\n EXTRACT(DAY FROM second_date - first_date) as interval_days,\n EXTRACT(DAY FROM now() - first_date) as from_now_days\n from (\n select subject_identifier, site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= now()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where second_value is not null and third_value is null\n ) as A2\n order by site_id, from_now_days desc",
|
148
|
+
"unattended_two_in_row_view",
|
149
|
+
engine="django.db.backends.postgresql",
|
150
|
+
),
|
151
|
+
atomic=False,
|
152
|
+
),
|
153
|
+
django_db_views.operations.ViewRunPython(
|
154
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
155
|
+
"# noqa\nSELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created, 'meta_reports.unattendedtwoinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value,\n CAST(JulianDay(second_date) - JulianDay(first_date) AS Integer) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer) as from_now_days\n from (\n select subject_identifier ,site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= datetime()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where second_value is not null and third_value is null\n ) as A2\n order by site_id, from_now_days desc",
|
156
|
+
"unattended_two_in_row_view",
|
157
|
+
engine="django.db.backends.sqlite3",
|
158
|
+
),
|
159
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
160
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as created, 'meta_reports.unattendedtwoinrow' as report_model from (\n select subject_identifier, site_id, appt_datetime, first_value, second_value,\n CAST(JulianDay(second_date) - JulianDay(first_date) AS Integer) as interval_days,\n CAST(JulianDay(datetime()) - JulianDay(first_date) AS Integer) as from_now_days\n from (\n select subject_identifier ,site_id, appt_datetime,\n FIRST_VALUE(visit_code) OVER w as first_value,\n NTH_VALUE(visit_code, 2) OVER w as second_value,\n NTH_VALUE(visit_code, 3) OVER w as third_value,\n FIRST_VALUE(appt_datetime) OVER w as first_date,\n NTH_VALUE(appt_datetime, 2) OVER w as second_date\n from edc_appointment_appointment where visit_code_sequence=0 and appt_status='New'\n and appt_datetime <= datetime()\n WINDOW w as (PARTITION BY subject_identifier order by appt_datetime ROWS UNBOUNDED PRECEDING)\n ) as A1\n where second_value is not null and third_value is null\n ) as A2\n order by site_id, from_now_days desc",
|
161
|
+
"unattended_two_in_row_view",
|
162
|
+
engine="django.db.backends.sqlite3",
|
163
|
+
),
|
164
|
+
atomic=False,
|
165
|
+
),
|
166
|
+
]
|
@@ -0,0 +1,54 @@
|
|
1
|
+
# Generated by Django 5.1 on 2024-08-19 14:13
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
|
+
|
8
|
+
class Migration(migrations.Migration):
|
9
|
+
|
10
|
+
dependencies = [
|
11
|
+
("meta_reports", "0017_auto_20240819_1711"),
|
12
|
+
]
|
13
|
+
|
14
|
+
operations = [
|
15
|
+
django_db_views.operations.ViewRunPython(
|
16
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
17
|
+
"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
18
|
+
"missing_screening_ogtt_view",
|
19
|
+
engine="django.db.backends.mysql",
|
20
|
+
),
|
21
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
22
|
+
"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented \n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
23
|
+
"missing_screening_ogtt_view",
|
24
|
+
engine="django.db.backends.mysql",
|
25
|
+
),
|
26
|
+
atomic=False,
|
27
|
+
),
|
28
|
+
django_db_views.operations.ViewRunPython(
|
29
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
30
|
+
"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier\n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
31
|
+
"missing_screening_ogtt_view",
|
32
|
+
engine="django.db.backends.postgresql",
|
33
|
+
),
|
34
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
35
|
+
"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented \n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
36
|
+
"missing_screening_ogtt_view",
|
37
|
+
engine="django.db.backends.postgresql",
|
38
|
+
),
|
39
|
+
atomic=False,
|
40
|
+
),
|
41
|
+
django_db_views.operations.ViewRunPython(
|
42
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
43
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier\n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
44
|
+
"missing_screening_ogtt_view",
|
45
|
+
engine="django.db.backends.sqlite3",
|
46
|
+
),
|
47
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
48
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented \n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
49
|
+
"missing_screening_ogtt_view",
|
50
|
+
engine="django.db.backends.sqlite3",
|
51
|
+
),
|
52
|
+
atomic=False,
|
53
|
+
),
|
54
|
+
]
|
@@ -0,0 +1,54 @@
|
|
1
|
+
# Generated by Django 5.1 on 2024-08-19 14:21
|
2
|
+
|
3
|
+
import django_db_views.migration_functions
|
4
|
+
import django_db_views.operations
|
5
|
+
from django.db import migrations
|
6
|
+
|
7
|
+
|
8
|
+
class Migration(migrations.Migration):
|
9
|
+
|
10
|
+
dependencies = [
|
11
|
+
("meta_reports", "0018_auto_20240819_1713"),
|
12
|
+
]
|
13
|
+
|
14
|
+
operations = [
|
15
|
+
django_db_views.operations.ViewRunPython(
|
16
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
17
|
+
"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null\n ) as A\n order by screening_identifier",
|
18
|
+
"missing_screening_ogtt_view",
|
19
|
+
engine="django.db.backends.mysql",
|
20
|
+
),
|
21
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
22
|
+
"select *, uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
23
|
+
"missing_screening_ogtt_view",
|
24
|
+
engine="django.db.backends.mysql",
|
25
|
+
),
|
26
|
+
atomic=False,
|
27
|
+
),
|
28
|
+
django_db_views.operations.ViewRunPython(
|
29
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
30
|
+
"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null\n ) as A\n order by screening_identifier",
|
31
|
+
"missing_screening_ogtt_view",
|
32
|
+
engine="django.db.backends.postgresql",
|
33
|
+
),
|
34
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
35
|
+
"select *, get_random_uuid() as id, now() as created,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier\n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
36
|
+
"missing_screening_ogtt_view",
|
37
|
+
engine="django.db.backends.postgresql",
|
38
|
+
),
|
39
|
+
atomic=False,
|
40
|
+
),
|
41
|
+
django_db_views.operations.ViewRunPython(
|
42
|
+
code=django_db_views.migration_functions.ForwardViewMigration(
|
43
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n converted_fbg_value as fbg_value, converted_ogtt_value as ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier \n from meta_screening_subjectscreening \n where converted_fbg_value is not null and converted_ogtt_value is null\n ) as A\n order by screening_identifier",
|
44
|
+
"missing_screening_ogtt_view",
|
45
|
+
engine="django.db.backends.sqlite3",
|
46
|
+
),
|
47
|
+
reverse_code=django_db_views.migration_functions.BackwardViewMigration(
|
48
|
+
"SELECT *, lower(\n hex(randomblob(4)) || '-' || hex(randomblob(2)) || '-' || '4' ||\n substr(hex( randomblob(2)), 2) || '-' ||\n substr('AB89', 1 + (abs(random()) % 4) , 1) ||\n substr(hex(randomblob(2)), 2) || '-' ||\n hex(randomblob(6))\n ) as id, datetime() as `created`,\n 'meta_reports.missing_screening_ogtt_view' as report_model\n from (\n select screening_identifier, site_id, report_datetime as 'screening_datetime', fbg_datetime,\n fbg_value, ogtt_value, fbg2_value, ogtt2_value, fbg2_datetime, ogtt2_datetime, consented, \"\" as subject_identifier\n from meta_screening_subjectscreening \n where fbg_value is not null and ogtt_value is null\n ) as A\n order by screening_identifier",
|
49
|
+
"missing_screening_ogtt_view",
|
50
|
+
engine="django.db.backends.sqlite3",
|
51
|
+
),
|
52
|
+
atomic=False,
|
53
|
+
),
|
54
|
+
]
|