meta-edc 0.3.15__py3-none-any.whl → 0.3.50__py3-none-any.whl
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- meta_ae/action_items.py +2 -2
- meta_ae/migrations/0017_auto_20221130_2257.py +12 -7
- meta_ae/tests/holidays.csv +1 -1
- meta_analytics/README.rst +17 -0
- meta_analytics/dataframes/__init__.py +19 -0
- meta_analytics/dataframes/constants.py +33 -0
- meta_analytics/dataframes/enrolled/__init__.py +1 -0
- meta_analytics/dataframes/enrolled/get_glucose_df.py +122 -0
- meta_analytics/dataframes/get_eos_df.py +26 -0
- meta_analytics/dataframes/get_last_imp_visits_df.py +101 -0
- meta_analytics/dataframes/glucose_endpoints/__init__.py +2 -0
- meta_analytics/dataframes/glucose_endpoints/endpoint_by_date.py +183 -0
- meta_analytics/dataframes/glucose_endpoints/glucose_endpoints_by_date.py +531 -0
- meta_analytics/dataframes/screening/__init__.py +2 -0
- meta_analytics/dataframes/screening/get_glucose_tested_only_df.py +20 -0
- meta_analytics/dataframes/screening/get_screening_df.py +163 -0
- meta_analytics/dataframes/utils.py +65 -0
- meta_analytics/get_tables.py +81 -0
- meta_analytics/tables/__init__.py +2 -0
- meta_analytics/tables/eligible.py +106 -0
- meta_analytics/tables/enrolled/__init__.py +0 -0
- meta_analytics/tables/enrolled/glucose.py +28 -0
- meta_analytics/tables/has_dm.py +61 -0
- meta_analytics/tests/__init__.py +0 -0
- meta_analytics/tests/test_endpoints_by_date.py +94 -0
- meta_auth/auth_objects.py +22 -0
- meta_auth/auths.py +18 -3
- meta_consent/action_items.py +18 -1
- meta_consent/admin/__init__.py +1 -0
- meta_consent/admin/subject_consent_v1_ext_admin.py +45 -0
- meta_consent/baker_recipes.py +1 -0
- meta_consent/consents.py +20 -1
- meta_consent/constants.py +1 -0
- meta_consent/forms/__init__.py +1 -0
- meta_consent/forms/subject_consent_v1_ext_form.py +16 -0
- meta_consent/locale/lg/LC_MESSAGES/django.po +69 -0
- meta_consent/locale/sw/LC_MESSAGES/django.po +12 -12
- meta_consent/migrations/0026_historicalsubjectconsentv1ext_subjectconsentv1ext.py +544 -0
- meta_consent/migrations/0027_auto_20250111_0344.py +30 -0
- meta_consent/models/__init__.py +1 -0
- meta_consent/models/signals.py +18 -0
- meta_consent/models/subject_consent_v1_ext.py +29 -0
- meta_consent/tests/holidays.csv +1 -1
- meta_dashboard/locale/lg/LC_MESSAGES/django.po +30 -0
- meta_dashboard/locale/sw/LC_MESSAGES/django.po +11 -2
- meta_dashboard/navbars.py +3 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/buttons/eligibility_button.html +1 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/buttons/screening_button.html +1 -1
- meta_dashboard/templates/meta_dashboard/bootstrap3/subject/dashboard/sidebar.html +24 -0
- meta_dashboard/templates/meta_dashboard/bootstrap3/subject/dashboard.html +3 -0
- meta_dashboard/templatetags/meta_dashboard_extras.py +1 -1
- meta_dashboard/tests/holidays.csv +1 -1
- meta_dashboard/tests/urls.py +0 -1
- meta_dashboard/view_utils/__init__.py +6 -0
- meta_dashboard/view_utils/subject_screening_button.py +2 -2
- meta_dashboard/views/subject/dashboard/dashboard_view.py +38 -0
- meta_edc/__init__.py +7 -0
- meta_edc/celery.py +4 -13
- meta_edc/celery_live.py +18 -0
- meta_edc/celery_uat.py +24 -0
- meta_edc/management/commands/update_forms_reference.py +6 -2
- meta_edc/migrations/__init__.py +0 -0
- meta_edc/navbars.py +2 -1
- meta_edc/settings/debug.py +10 -2
- meta_edc/settings/defaults.py +58 -43
- meta_edc/templates/meta_edc/bootstrap3/home.html +5 -2
- meta_edc/tests/tests/test_endpoints.py +2 -0
- meta_edc/urls.py +4 -1
- meta_edc/wsgi.py +1 -1
- meta_edc/wsgi_live.py +1 -1
- meta_edc/wsgi_uat.py +1 -1
- meta_edc-0.3.50.dist-info/AUTHORS +0 -0
- meta_edc-0.3.50.dist-info/METADATA +766 -0
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/RECORD +316 -127
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/WHEEL +1 -1
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/top_level.txt +1 -0
- meta_pharmacy/admin/__init__.py +2 -0
- meta_pharmacy/admin/rx_admin.py +75 -0
- meta_pharmacy/admin/substitutions_admin.py +67 -0
- meta_pharmacy/admin_site.py +9 -0
- meta_pharmacy/apps.py +5 -0
- meta_pharmacy/constants.py +10 -0
- meta_pharmacy/forms/__init__.py +2 -0
- meta_pharmacy/forms/rx_form.py +16 -0
- meta_pharmacy/forms/substitutions_form.py +54 -0
- meta_pharmacy/label_configs.py +30 -0
- meta_pharmacy/labels/__init__.py +5 -0
- meta_pharmacy/labels/draw_label_for_subject_with_barcode.py +62 -0
- meta_pharmacy/labels/draw_label_for_subject_with_code128.py +14 -0
- meta_pharmacy/labels/draw_label_with_test_data.py +26 -0
- meta_pharmacy/labels/label_data.py +14 -0
- meta_pharmacy/labels/print_sheets.py +97 -0
- meta_pharmacy/list_data.py +8 -0
- meta_pharmacy/management/__init__.py +0 -0
- meta_pharmacy/management/commands/__init__.py +0 -0
- meta_pharmacy/management/commands/update_initial_pharmacy_data.py +10 -0
- meta_pharmacy/migrations/0002_initial.py +695 -0
- meta_pharmacy/migrations/0003_auto_20240909_2335.py +64 -0
- meta_pharmacy/migrations/0004_alter_historicalsubstitutions_report_datetime_and_more.py +23 -0
- meta_pharmacy/migrations/0005_auto_20240911_0352.py +17 -0
- meta_pharmacy/migrations/0006_lotnumber_label.py +289 -0
- meta_pharmacy/migrations/0007_lotnumber_medication.py +24 -0
- meta_pharmacy/migrations/0008_remove_lotnumber_medication_and_more.py +390 -0
- meta_pharmacy/migrations/0009_remove_historicalrx_slug.py +17 -0
- meta_pharmacy/models/__init__.py +3 -0
- meta_pharmacy/models/label_data.py +38 -0
- meta_pharmacy/models/rx.py +18 -0
- meta_pharmacy/models/rx_label.py +39 -0
- meta_pharmacy/models/substitutions.py +88 -0
- meta_pharmacy/urls.py +8 -0
- meta_pharmacy/utils/__init__.py +1 -0
- meta_pharmacy/utils/update_initial_pharmacy_data.py +146 -0
- meta_prn/action_items.py +9 -1
- meta_prn/admin/pregnancy_notification_admin.py +6 -2
- meta_prn/migrations/0034_auto_20220630_1110.py +3 -3
- meta_prn/migrations/0035_auto_20220630_1140.py +59 -56
- meta_prn/tests/tests/test_dm_referral.py +3 -6
- meta_reports/__init__.py +1 -0
- meta_reports/admin/__init__.py +15 -0
- meta_reports/admin/dbviews/__init__.py +14 -0
- meta_reports/admin/dbviews/glucose_summary_admin.py +116 -0
- meta_reports/admin/dbviews/imp_substitutions_admin.py +101 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/__init__.py +2 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/note_model_admin.py +53 -0
- meta_reports/admin/dbviews/missing_screening_ogtt_admin/unmanaged_model_admin.py +84 -0
- meta_reports/admin/dbviews/on_study_missing_lab_values_admin/__init__.py +1 -0
- meta_reports/admin/dbviews/on_study_missing_lab_values_admin/unmanaged_model_admin.py +13 -0
- meta_reports/admin/dbviews/on_study_missing_values_admin/__init__.py +1 -0
- meta_reports/admin/dbviews/on_study_missing_values_admin/unmanaged_model_admin.py +13 -0
- meta_reports/admin/dbviews/patient_history_missing_baseline_cd4_admin.py +58 -0
- meta_reports/admin/dbviews/unattended_three_in_row2_admin.py +47 -0
- meta_reports/admin/dbviews/unattended_three_in_row_admin.py +35 -0
- meta_reports/admin/dbviews/unattended_two_in_row_admin.py +34 -0
- meta_reports/admin/endpoints_admin.py +14 -0
- meta_reports/admin/endpoints_all_admin.py +13 -0
- meta_reports/admin/last_imp_refill_admin.py +181 -0
- meta_reports/admin/list_filters.py +30 -0
- meta_reports/admin/modeladmin_mixins.py +112 -0
- meta_reports/admin_site.py +5 -0
- meta_reports/apps.py +1 -16
- meta_reports/forms/__init__.py +1 -0
- meta_reports/forms/missing_ogtt_note_form.py +33 -0
- meta_reports/management/__init__.py +0 -0
- meta_reports/management/commands/__init__.py +0 -0
- meta_reports/management/commands/generate_endpoints.py +13 -0
- meta_reports/migrations/0001_initial.py +87 -0
- meta_reports/migrations/0002_patienthistorymissingbaselinecd4_and_more.py +64 -0
- meta_reports/migrations/0003_auto_20240618_0505.py +12 -0
- meta_reports/migrations/0004_alter_patienthistorymissingbaselinecd4_table.py +17 -0
- meta_reports/migrations/0005_endpoints.py +47 -0
- meta_reports/migrations/0006_endpoints_baseline_datetime.py +18 -0
- meta_reports/migrations/0007_alter_endpoints_endpoint_label_and_more.py +43 -0
- meta_reports/migrations/0008_alter_endpoints_endpoint_label.py +18 -0
- meta_reports/migrations/0009_alter_endpoints_options.py +21 -0
- meta_reports/migrations/0010_alter_patienthistorymissingbaselinecd4_options_and_more.py +49 -0
- meta_reports/migrations/0011_auto_20240813_0156.py +54 -0
- meta_reports/migrations/0012_auto_20240813_1516.py +48 -0
- meta_reports/migrations/0013_auto_20240813_1516.py +48 -0
- meta_reports/migrations/0014_auto_20240813_1517.py +48 -0
- meta_reports/migrations/0015_alter_endpoints_site.py +22 -0
- meta_reports/migrations/0016_missingscreeningogtt.py +47 -0
- meta_reports/migrations/0017_auto_20240819_1711.py +166 -0
- meta_reports/migrations/0018_auto_20240819_1713.py +54 -0
- meta_reports/migrations/0019_auto_20240819_1721.py +54 -0
- meta_reports/migrations/0020_auto_20240819_1811.py +54 -0
- meta_reports/migrations/0021_auto_20240819_1817.py +54 -0
- meta_reports/migrations/0022_auto_20240819_1832.py +54 -0
- meta_reports/migrations/0023_endpoints_meta_report_subject_a56b22_idx.py +20 -0
- meta_reports/migrations/0024_glucosesummary.py +38 -0
- meta_reports/migrations/0025_auto_20240822_0115.py +87 -0
- meta_reports/migrations/0026_auto_20240822_0120.py +54 -0
- meta_reports/migrations/0027_auto_20240822_0140.py +54 -0
- meta_reports/migrations/0028_alter_glucosesummary_options.py +22 -0
- meta_reports/migrations/0029_auto_20240822_0149.py +54 -0
- meta_reports/migrations/0030_auto_20240822_1637.py +54 -0
- meta_reports/migrations/0031_endpointsproxy.py +25 -0
- meta_reports/migrations/0032_alter_endpointsproxy_options.py +21 -0
- meta_reports/migrations/0033_auto_20240823_0012.py +54 -0
- meta_reports/migrations/0034_auto_20240823_1642.py +54 -0
- meta_reports/migrations/0035_historicalmissingogttnote_missingogttnote.py +457 -0
- meta_reports/migrations/0036_historicalmissingogttnote_fasting_and_more.py +86 -0
- meta_reports/migrations/0037_historicalmissingogttnote_result_status_and_more.py +51 -0
- meta_reports/migrations/0038_alter_historicalmissingogttnote_fasting_and_more.py +33 -0
- meta_reports/migrations/0039_onstudymissingvalues.py +44 -0
- meta_reports/migrations/0040_auto_20240824_0412.py +282 -0
- meta_reports/migrations/0041_auto_20240828_2229.py +14 -0
- meta_reports/migrations/0042_onstudymissinglabvalues.py +43 -0
- meta_reports/migrations/0043_auto_20240828_2309.py +88 -0
- meta_reports/migrations/0044_auto_20240828_2323.py +93 -0
- meta_reports/migrations/0045_auto_20240829_0248.py +54 -0
- meta_reports/migrations/0046_auto_20240829_0250.py +54 -0
- meta_reports/migrations/0047_impsubstitutions.py +56 -0
- meta_reports/migrations/0048_auto_20240909_2338.py +48 -0
- meta_reports/migrations/0049_auto_20240911_0327.py +54 -0
- meta_reports/migrations/0050_alter_endpoints_created.py +19 -0
- meta_reports/migrations/0051_remove_endpoints_baseline_datetime_and_more.py +40 -0
- meta_reports/migrations/0052_lastimpvisit.py +57 -0
- meta_reports/migrations/0053_rename_lastimpvisit_lastimprefill_and_more.py +31 -0
- meta_reports/models/__init__.py +16 -0
- meta_reports/models/dbviews/README +14 -0
- meta_reports/models/dbviews/__init__.py +9 -0
- meta_reports/models/dbviews/glucose_summary/__init__.py +2 -0
- meta_reports/models/dbviews/glucose_summary/unmanaged_model.py +35 -0
- meta_reports/models/dbviews/glucose_summary/view_definition.py +28 -0
- meta_reports/models/dbviews/imp_substitutions/__init__.py +1 -0
- meta_reports/models/dbviews/imp_substitutions/unmanaged_model.py +41 -0
- meta_reports/models/dbviews/imp_substitutions/view_definition.py +21 -0
- meta_reports/models/dbviews/missing_screening_ogtt/__init__.py +2 -0
- meta_reports/models/dbviews/missing_screening_ogtt/note_model.py +57 -0
- meta_reports/models/dbviews/missing_screening_ogtt/unmanaged_model.py +41 -0
- meta_reports/models/dbviews/missing_screening_ogtt/view_definition.py +20 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/__init__.py +1 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/qa_cases.py +53 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/unmanged_model.py +20 -0
- meta_reports/models/dbviews/on_study_missing_lab_values/view_definition.py +17 -0
- meta_reports/models/dbviews/on_study_missing_values/__init__.py +1 -0
- meta_reports/models/dbviews/on_study_missing_values/qa_cases.py +54 -0
- meta_reports/models/dbviews/on_study_missing_values/unmanged_model.py +20 -0
- meta_reports/models/dbviews/on_study_missing_values/view_definition.py +17 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/__init__.py +1 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/unmanaged_model.py +31 -0
- meta_reports/models/dbviews/patient_history_missing_baseline_cd4/view_definition.py +21 -0
- meta_reports/models/dbviews/unattended_three_in_row/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_three_in_row/unmanaged_model.py +29 -0
- meta_reports/models/dbviews/unattended_three_in_row/view_definition.py +31 -0
- meta_reports/models/dbviews/unattended_three_in_row2/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_three_in_row2/unmanaged_model.py +29 -0
- meta_reports/models/dbviews/unattended_three_in_row2/view_definition.py +50 -0
- meta_reports/models/dbviews/unattended_two_in_row/__init__.py +1 -0
- meta_reports/models/dbviews/unattended_two_in_row/unmanaged_model.py +27 -0
- meta_reports/models/dbviews/unattended_two_in_row/view_definition.py +30 -0
- meta_reports/models/endpoints.py +31 -0
- meta_reports/models/endpoints_proxy.py +11 -0
- meta_reports/models/last_imp_refill.py +34 -0
- meta_reports/tasks.py +12 -0
- meta_reports/templates/meta_reports/columns/subject_identifier_column.html +1 -0
- meta_reports/templates/meta_reports/endpoints_all_change_list_note.html +12 -0
- meta_reports/templates/meta_reports/endpoints_change_list_note.html +12 -0
- meta_reports/tests/test_sql_gen.py +5 -0
- meta_reports/urls.py +8 -0
- meta_reports/utils.py +0 -0
- meta_screening/admin/subject_screening_admin.py +1 -0
- meta_screening/migrations/0067_alter_historicalscreeningpartone_report_datetime_and_more.py +84 -0
- meta_screening/tests/holidays.csv +1 -1
- meta_screening/tests/meta_test_case_mixin.py +15 -0
- meta_sites/tests/test_sites.py +1 -1
- meta_subject/action_items.py +2 -2
- meta_subject/admin/__init__.py +2 -1
- meta_subject/admin/birth_outcome_admin.py +2 -0
- meta_subject/admin/blood_results/__init__.py +1 -1
- meta_subject/admin/blood_results/{blood_results_lipid_admin.py → blood_results_lipids_admin.py} +7 -7
- meta_subject/admin/diabetes/__init__.py +1 -1
- meta_subject/admin/diabetes/dm_endpoint_admin.py +35 -0
- meta_subject/admin/glucose_fbg_admin.py +4 -0
- meta_subject/admin/other_arv_regimens_admin.py +2 -0
- meta_subject/admin/study_medication_admin.py +10 -0
- meta_subject/form_validators/__init__.py +1 -1
- meta_subject/form_validators/dm_endpoint_form_validator.py +35 -0
- meta_subject/forms/__init__.py +2 -2
- meta_subject/forms/blood_results/__init__.py +1 -1
- meta_subject/forms/blood_results/{blood_results_lipid_form.py → blood_results_lipids_form.py} +5 -5
- meta_subject/forms/diabetes/__init__.py +1 -2
- meta_subject/forms/diabetes/dm_endpoint_form.py +13 -0
- meta_subject/forms/study_medication_form.py +35 -0
- meta_subject/locale/lg/LC_MESSAGES/django.po +470 -0
- meta_subject/locale/sw/LC_MESSAGES/django.po +191 -89
- meta_subject/metadata_rules/metadata_rules.py +7 -0
- meta_subject/metadata_rules/predicates.py +45 -8
- meta_subject/migrations/0107_auto_20220415_0043.py +28 -22
- meta_subject/migrations/0126_auto_20220719_2142.py +4 -4
- meta_subject/migrations/0131_auto_20220722_0411.py +28 -23
- meta_subject/migrations/0132_auto_20220722_1825.py +10 -6
- meta_subject/migrations/0135_auto_20220722_2212.py +39 -35
- meta_subject/migrations/0150_auto_20220914_0039.py +15 -11
- meta_subject/migrations/0207_alter_historicalphysicalexam_waist_circumference_and_more.py +46 -0
- meta_subject/migrations/0208_birthoutcomes_crf_status_and_more.py +62 -0
- meta_subject/migrations/0209_remove_historicaldmdxresult_dm_diagnosis_and_more.py +37 -0
- meta_subject/migrations/0210_remove_dmdxresult_dm_diagnosis_and_more.py +123 -0
- meta_subject/migrations/0211_dmendpoint_endpoint_reached_and_more.py +45 -0
- meta_subject/migrations/0212_auto_20240827_2222.py +23 -0
- meta_subject/migrations/0213_rename_bloodresultslipid_bloodresultslipids_and_more.py +35 -0
- meta_subject/migrations/0214_historicalstudymedication_stock_codes_and_more.py +44 -0
- meta_subject/migrations/0215_alter_historicalstudymedication_stock_codes_and_more.py +46 -0
- meta_subject/model_mixins/arv_history_model_mixin.py +3 -3
- meta_subject/models/__init__.py +3 -2
- meta_subject/models/birth_outcomes.py +6 -1
- meta_subject/models/blood_results/__init__.py +1 -1
- meta_subject/models/blood_results/{blood_results_lipid.py → blood_results_lipids.py} +3 -3
- meta_subject/models/diabetes/__init__.py +1 -2
- meta_subject/models/diabetes/dm_endpoint.py +61 -0
- meta_subject/models/glucose.py +4 -1
- meta_subject/models/physical_exam.py +1 -0
- meta_subject/models/signals.py +19 -0
- meta_subject/models/todo.txt +1 -1
- meta_subject/static/meta_subject/slider.css +1 -1
- meta_subject/templates/meta_subject/endpoint_review_instructions.html +1 -1
- meta_subject/templates/meta_subject/widgets/slider.html +0 -1
- meta_subject/tests/holidays.csv +1 -1
- meta_subject/tests/tests/test_medication_adherence.py +5 -1
- meta_subject/tests/tests/test_metadata_rules.py +2 -2
- meta_subject/tests/tests/test_mnsi.py +212 -121
- meta_subject/tests/tests/test_sf12.py +0 -12
- meta_visit_schedule/constants.py +4 -0
- meta_visit_schedule/tests/tests/test_schedule.py +4 -0
- meta_visit_schedule/visit_schedules/phase_three/crfs.py +75 -13
- meta_visit_schedule/visit_schedules/phase_three/requisitions.py +12 -0
- meta_visit_schedule/visit_schedules/phase_three/schedule.py +65 -2
- meta_visit_schedule/visit_schedules/phase_three/schedule_dm_referral.py +1 -1
- tests/etc/randomization_list.csv +1 -1
- {meta_edc/tests → tests}/etc/randomization_list_phase_three.csv +4 -4
- tests/holidays.csv +1 -1
- {meta_edc/tests → tests}/test_settings.py +16 -6
- meta_edc/tests/etc/user-aes-local.key +0 -1
- meta_edc/tests/etc/user-aes-restricted.key +0 -0
- meta_edc/tests/etc/user-rsa-local-private.pem +0 -27
- meta_edc/tests/etc/user-rsa-local-public.pem +0 -9
- meta_edc/tests/etc/user-rsa-restricted-private.pem +0 -27
- meta_edc/tests/etc/user-rsa-restricted-public.pem +0 -9
- meta_edc/tests/etc/user-salt-local.key +0 -0
- meta_edc/tests/etc/user-salt-restricted.key +0 -0
- meta_edc-0.3.15.dist-info/METADATA +0 -88
- meta_reports/tests/holidays.csv +0 -15
- meta_subject/admin/diabetes/dm_diagnosis_admin.py +0 -89
- meta_subject/form_validators/dm_diagnosis_form_validator.py +0 -38
- meta_subject/form_validators/dm_dx_result_form_validator.py +0 -7
- meta_subject/forms/diabetes/dm_diagnosis_form.py +0 -13
- meta_subject/forms/diabetes/dm_dx_result_form.py +0 -11
- meta_subject/models/diabetes/dm_diagnosis.py +0 -50
- meta_subject/models/diabetes/dm_dx_result.py +0 -70
- /meta_edc-0.3.15.dist-info/AUTHORS → /meta_analytics/__init__.py +0 -0
- /meta_pharmacy/models.py → /meta_analytics/constants.py +0 -0
- /meta_reports/models.py → /meta_analytics/notebooks/cleaning/__init__.py +0 -0
- {meta_edc-0.3.15.dist-info → meta_edc-0.3.50.dist-info}/LICENSE +0 -0
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# Generated by Django 5.1 on 2024-09-09 20:35
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import uuid
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import _socket
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import django.db.models.deletion
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import django_audit_fields.fields.hostname_modification_field
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import django_audit_fields.fields.userfield
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import django_audit_fields.fields.uuid_auto_field
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import django_audit_fields.models.audit_model_mixin
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import django_revision.revision_field
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import edc_pharmacy.models.prescription.rx
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import edc_sites.managers
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import edc_utils.date
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import simple_history.models
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from django.conf import settings
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from django.db import migrations, models
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import meta_pharmacy.models
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class Migration(migrations.Migration):
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initial = True
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dependencies = [
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("edc_action_item", "0037_remove_actionitem_reference_model_and_more"),
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("edc_pharmacy", "0023_remove_rx_edc_pharmac_modifie_986021_idx_and_more"),
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("meta_pharmacy", "0001_initial"),
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("sites", "0002_alter_domain_unique"),
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migrations.swappable_dependency(settings.AUTH_USER_MODEL),
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]
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operations = [
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migrations.CreateModel(
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name="Rx",
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fields=[],
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options={
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"proxy": True,
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"indexes": [],
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"constraints": [],
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},
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bases=("edc_pharmacy.rx",),
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managers=[
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("objects", edc_pharmacy.models.prescription.rx.Manager()),
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("on_site", edc_sites.managers.CurrentSiteManager()),
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],
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),
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migrations.CreateModel(
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name="HistoricalRx",
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fields=[
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(
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"revision",
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django_revision.revision_field.RevisionField(
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blank=True,
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editable=False,
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help_text="System field. Git repository tag:branch:commit.",
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max_length=75,
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null=True,
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verbose_name="Revision",
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),
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),
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(
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"created",
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models.DateTimeField(
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blank=True, default=django_audit_fields.models.audit_model_mixin.utcnow
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),
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),
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(
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"modified",
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models.DateTimeField(
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blank=True, default=django_audit_fields.models.audit_model_mixin.utcnow
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),
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),
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(
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"user_created",
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django_audit_fields.fields.userfield.UserField(
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blank=True,
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help_text="Updated by admin.save_model",
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max_length=50,
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verbose_name="user created",
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),
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),
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(
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"user_modified",
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django_audit_fields.fields.userfield.UserField(
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blank=True,
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help_text="Updated by admin.save_model",
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max_length=50,
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verbose_name="user modified",
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),
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),
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(
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"hostname_created",
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models.CharField(
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blank=True,
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default=_socket.gethostname,
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help_text="System field. (modified on create only)",
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max_length=60,
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verbose_name="Hostname created",
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),
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),
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(
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"hostname_modified",
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django_audit_fields.fields.hostname_modification_field.HostnameModificationField(
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blank=True,
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help_text="System field. (modified on every save)",
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max_length=50,
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verbose_name="Hostname modified",
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),
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),
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(
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"device_created",
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models.CharField(blank=True, max_length=10, verbose_name="Device created"),
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),
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(
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"device_modified",
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models.CharField(
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blank=True, max_length=10, verbose_name="Device modified"
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),
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),
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(
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"locale_created",
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models.CharField(
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blank=True,
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help_text="Auto-updated by Modeladmin",
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max_length=10,
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null=True,
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verbose_name="Locale created",
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),
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),
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(
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"locale_modified",
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models.CharField(
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blank=True,
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help_text="Auto-updated by Modeladmin",
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max_length=10,
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null=True,
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verbose_name="Locale modified",
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),
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),
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(
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"id",
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django_audit_fields.fields.uuid_auto_field.UUIDAutoField(
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blank=True,
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db_index=True,
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editable=False,
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help_text="System auto field. UUID primary key.",
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),
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),
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("subject_identifier", models.CharField(max_length=50)),
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(
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"action_identifier",
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models.CharField(blank=True, db_index=True, max_length=50, null=True),
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),
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(
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"parent_action_identifier",
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models.CharField(
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blank=True,
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help_text="action identifier that links to parent reference model instance.",
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max_length=30,
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null=True,
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),
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),
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(
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"related_action_identifier",
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models.CharField(
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blank=True,
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help_text="action identifier that links to related reference model instance.",
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max_length=30,
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null=True,
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),
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),
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("action_item_reason", models.TextField(editable=False, null=True)),
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(
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"slug",
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models.CharField(
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db_index=True,
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default="",
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editable=False,
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help_text="a field used for quick search",
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max_length=250,
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null=True,
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),
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),
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(
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"rx_identifier",
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models.CharField(db_index=True, default=uuid.uuid4, max_length=36),
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),
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("rx_name", models.CharField(default="study prescription", max_length=36)),
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("report_datetime", models.DateTimeField(default=edc_utils.date.get_utcnow)),
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(
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"rx_date",
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models.DateField(
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default=edc_utils.date.get_utcnow, verbose_name="Date RX written"
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),
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),
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(
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"rx_expiration_date",
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models.DateField(
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blank=True,
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help_text="Leave blank. Will be filled when end of study report is submitted",
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null=True,
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verbose_name="Date RX expires",
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),
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),
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(
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"status",
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models.CharField(
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choices=[
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("New", "New"),
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("partial", "Partially filled"),
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("filled", "Filled"),
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("cancelled", "Cancelled"),
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],
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default="New",
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max_length=25,
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),
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),
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(
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"refill",
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models.IntegerField(
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blank=True,
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help_text="Number of times this prescription may be refilled",
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null=True,
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),
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),
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("rando_sid", models.CharField(blank=True, max_length=25, null=True)),
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("randomizer_name", models.CharField(blank=True, max_length=25, null=True)),
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(
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"weight_in_kgs",
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models.DecimalField(blank=True, decimal_places=1, max_digits=6, null=True),
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),
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("clinician_initials", models.CharField(max_length=3, null=True)),
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(
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"notes",
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models.TextField(
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blank=True,
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help_text="Private notes for pharmacist only",
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max_length=250,
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null=True,
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),
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),
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(
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"history_id",
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models.UUIDField(
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default=uuid.uuid4, editable=False, primary_key=True, serialize=False
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),
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),
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("history_date", models.DateTimeField(db_index=True)),
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("history_change_reason", models.CharField(max_length=100, null=True)),
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(
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"history_type",
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models.CharField(
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choices=[("+", "Created"), ("~", "Changed"), ("-", "Deleted")],
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max_length=1,
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),
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),
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(
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"action_item",
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models.ForeignKey(
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blank=True,
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db_constraint=False,
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null=True,
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on_delete=django.db.models.deletion.DO_NOTHING,
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related_name="+",
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to="edc_action_item.actionitem",
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),
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),
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(
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"history_user",
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models.ForeignKey(
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null=True,
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on_delete=django.db.models.deletion.SET_NULL,
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related_name="+",
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to=settings.AUTH_USER_MODEL,
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),
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),
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(
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"parent_action_item",
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models.ForeignKey(
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blank=True,
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db_constraint=False,
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null=True,
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on_delete=django.db.models.deletion.DO_NOTHING,
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related_name="+",
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to="edc_action_item.actionitem",
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),
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),
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(
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"registered_subject",
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models.ForeignKey(
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blank=True,
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db_constraint=False,
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null=True,
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on_delete=django.db.models.deletion.DO_NOTHING,
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related_name="+",
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to="edc_registration.registeredsubject",
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verbose_name="Subject Identifier",
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),
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),
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(
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"related_action_item",
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models.ForeignKey(
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blank=True,
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db_constraint=False,
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null=True,
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on_delete=django.db.models.deletion.DO_NOTHING,
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related_name="+",
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to="edc_action_item.actionitem",
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),
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),
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(
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"site",
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models.ForeignKey(
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blank=True,
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db_constraint=False,
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null=True,
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on_delete=django.db.models.deletion.DO_NOTHING,
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related_name="+",
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to="sites.site",
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),
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),
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],
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options={
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"verbose_name": "historical rx",
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"verbose_name_plural": "historical rxs",
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"ordering": ("-history_date", "-history_id"),
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"get_latest_by": ("history_date", "history_id"),
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},
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bases=(simple_history.models.HistoricalChanges, models.Model),
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),
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migrations.CreateModel(
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name="HistoricalSubstitutions",
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fields=[
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(
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"revision",
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django_revision.revision_field.RevisionField(
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blank=True,
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editable=False,
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help_text="System field. Git repository tag:branch:commit.",
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max_length=75,
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null=True,
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verbose_name="Revision",
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),
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),
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(
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"created",
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models.DateTimeField(
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blank=True, default=django_audit_fields.models.audit_model_mixin.utcnow
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),
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),
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(
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"modified",
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models.DateTimeField(
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blank=True, default=django_audit_fields.models.audit_model_mixin.utcnow
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),
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),
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(
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"user_created",
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django_audit_fields.fields.userfield.UserField(
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blank=True,
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help_text="Updated by admin.save_model",
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max_length=50,
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verbose_name="user created",
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),
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),
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(
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"user_modified",
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django_audit_fields.fields.userfield.UserField(
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blank=True,
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help_text="Updated by admin.save_model",
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max_length=50,
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verbose_name="user modified",
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),
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),
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(
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"hostname_created",
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models.CharField(
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blank=True,
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default=_socket.gethostname,
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help_text="System field. (modified on create only)",
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max_length=60,
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verbose_name="Hostname created",
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),
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),
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(
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"hostname_modified",
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django_audit_fields.fields.hostname_modification_field.HostnameModificationField(
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blank=True,
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help_text="System field. (modified on every save)",
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max_length=50,
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verbose_name="Hostname modified",
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),
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),
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(
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"device_created",
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models.CharField(blank=True, max_length=10, verbose_name="Device created"),
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),
|
400
|
+
(
|
401
|
+
"device_modified",
|
402
|
+
models.CharField(
|
403
|
+
blank=True, max_length=10, verbose_name="Device modified"
|
404
|
+
),
|
405
|
+
),
|
406
|
+
(
|
407
|
+
"locale_created",
|
408
|
+
models.CharField(
|
409
|
+
blank=True,
|
410
|
+
help_text="Auto-updated by Modeladmin",
|
411
|
+
max_length=10,
|
412
|
+
null=True,
|
413
|
+
verbose_name="Locale created",
|
414
|
+
),
|
415
|
+
),
|
416
|
+
(
|
417
|
+
"locale_modified",
|
418
|
+
models.CharField(
|
419
|
+
blank=True,
|
420
|
+
help_text="Auto-updated by Modeladmin",
|
421
|
+
max_length=10,
|
422
|
+
null=True,
|
423
|
+
verbose_name="Locale modified",
|
424
|
+
),
|
425
|
+
),
|
426
|
+
(
|
427
|
+
"id",
|
428
|
+
django_audit_fields.fields.uuid_auto_field.UUIDAutoField(
|
429
|
+
blank=True,
|
430
|
+
db_index=True,
|
431
|
+
editable=False,
|
432
|
+
help_text="System auto field. UUID primary key.",
|
433
|
+
),
|
434
|
+
),
|
435
|
+
("subject_identifier", models.CharField(max_length=50)),
|
436
|
+
("report_datetime", models.DateTimeField()),
|
437
|
+
("row_index", models.IntegerField(null=True)),
|
438
|
+
("sid", models.IntegerField(verbose_name="SID")),
|
439
|
+
(
|
440
|
+
"visit_no",
|
441
|
+
models.IntegerField(blank=True, null=True, verbose_name="Visit Number"),
|
442
|
+
),
|
443
|
+
("dispensed_sid", models.IntegerField(verbose_name="Dispensed SID")),
|
444
|
+
(
|
445
|
+
"updated_visit_no",
|
446
|
+
models.IntegerField(blank=True, null=True, verbose_name="Visit Number"),
|
447
|
+
),
|
448
|
+
(
|
449
|
+
"updated_subject_identifier",
|
450
|
+
models.CharField(
|
451
|
+
blank=True, max_length=50, null=True, verbose_name="Taken from subject"
|
452
|
+
),
|
453
|
+
),
|
454
|
+
(
|
455
|
+
"arm_match",
|
456
|
+
models.CharField(
|
457
|
+
choices=[
|
458
|
+
("Yes", "Yes"),
|
459
|
+
("No", "No"),
|
460
|
+
("not_evaluated", "Not evaluated"),
|
461
|
+
],
|
462
|
+
default="not_evaluated",
|
463
|
+
max_length=15,
|
464
|
+
),
|
465
|
+
),
|
466
|
+
("notes", models.TextField(verbose_name="Notes")),
|
467
|
+
(
|
468
|
+
"history_id",
|
469
|
+
models.UUIDField(
|
470
|
+
default=uuid.uuid4, editable=False, primary_key=True, serialize=False
|
471
|
+
),
|
472
|
+
),
|
473
|
+
("history_date", models.DateTimeField(db_index=True)),
|
474
|
+
("history_change_reason", models.CharField(max_length=100, null=True)),
|
475
|
+
(
|
476
|
+
"history_type",
|
477
|
+
models.CharField(
|
478
|
+
choices=[("+", "Created"), ("~", "Changed"), ("-", "Deleted")],
|
479
|
+
max_length=1,
|
480
|
+
),
|
481
|
+
),
|
482
|
+
(
|
483
|
+
"history_user",
|
484
|
+
models.ForeignKey(
|
485
|
+
null=True,
|
486
|
+
on_delete=django.db.models.deletion.SET_NULL,
|
487
|
+
related_name="+",
|
488
|
+
to=settings.AUTH_USER_MODEL,
|
489
|
+
),
|
490
|
+
),
|
491
|
+
(
|
492
|
+
"site",
|
493
|
+
models.ForeignKey(
|
494
|
+
blank=True,
|
495
|
+
db_constraint=False,
|
496
|
+
null=True,
|
497
|
+
on_delete=django.db.models.deletion.DO_NOTHING,
|
498
|
+
related_name="+",
|
499
|
+
to="sites.site",
|
500
|
+
),
|
501
|
+
),
|
502
|
+
(
|
503
|
+
"rx",
|
504
|
+
models.ForeignKey(
|
505
|
+
blank=True,
|
506
|
+
db_constraint=False,
|
507
|
+
null=True,
|
508
|
+
on_delete=django.db.models.deletion.DO_NOTHING,
|
509
|
+
related_name="+",
|
510
|
+
to="meta_pharmacy.rx",
|
511
|
+
),
|
512
|
+
),
|
513
|
+
],
|
514
|
+
options={
|
515
|
+
"verbose_name": "historical IMP Substitution",
|
516
|
+
"verbose_name_plural": "historical IMP Substitutions",
|
517
|
+
"ordering": ("-history_date", "-history_id"),
|
518
|
+
"get_latest_by": ("history_date", "history_id"),
|
519
|
+
},
|
520
|
+
bases=(simple_history.models.HistoricalChanges, models.Model),
|
521
|
+
),
|
522
|
+
migrations.CreateModel(
|
523
|
+
name="Substitutions",
|
524
|
+
fields=[
|
525
|
+
(
|
526
|
+
"revision",
|
527
|
+
django_revision.revision_field.RevisionField(
|
528
|
+
blank=True,
|
529
|
+
editable=False,
|
530
|
+
help_text="System field. Git repository tag:branch:commit.",
|
531
|
+
max_length=75,
|
532
|
+
null=True,
|
533
|
+
verbose_name="Revision",
|
534
|
+
),
|
535
|
+
),
|
536
|
+
(
|
537
|
+
"created",
|
538
|
+
models.DateTimeField(
|
539
|
+
blank=True, default=django_audit_fields.models.audit_model_mixin.utcnow
|
540
|
+
),
|
541
|
+
),
|
542
|
+
(
|
543
|
+
"modified",
|
544
|
+
models.DateTimeField(
|
545
|
+
blank=True, default=django_audit_fields.models.audit_model_mixin.utcnow
|
546
|
+
),
|
547
|
+
),
|
548
|
+
(
|
549
|
+
"user_created",
|
550
|
+
django_audit_fields.fields.userfield.UserField(
|
551
|
+
blank=True,
|
552
|
+
help_text="Updated by admin.save_model",
|
553
|
+
max_length=50,
|
554
|
+
verbose_name="user created",
|
555
|
+
),
|
556
|
+
),
|
557
|
+
(
|
558
|
+
"user_modified",
|
559
|
+
django_audit_fields.fields.userfield.UserField(
|
560
|
+
blank=True,
|
561
|
+
help_text="Updated by admin.save_model",
|
562
|
+
max_length=50,
|
563
|
+
verbose_name="user modified",
|
564
|
+
),
|
565
|
+
),
|
566
|
+
(
|
567
|
+
"hostname_created",
|
568
|
+
models.CharField(
|
569
|
+
blank=True,
|
570
|
+
default=_socket.gethostname,
|
571
|
+
help_text="System field. (modified on create only)",
|
572
|
+
max_length=60,
|
573
|
+
verbose_name="Hostname created",
|
574
|
+
),
|
575
|
+
),
|
576
|
+
(
|
577
|
+
"hostname_modified",
|
578
|
+
django_audit_fields.fields.hostname_modification_field.HostnameModificationField(
|
579
|
+
blank=True,
|
580
|
+
help_text="System field. (modified on every save)",
|
581
|
+
max_length=50,
|
582
|
+
verbose_name="Hostname modified",
|
583
|
+
),
|
584
|
+
),
|
585
|
+
(
|
586
|
+
"device_created",
|
587
|
+
models.CharField(blank=True, max_length=10, verbose_name="Device created"),
|
588
|
+
),
|
589
|
+
(
|
590
|
+
"device_modified",
|
591
|
+
models.CharField(
|
592
|
+
blank=True, max_length=10, verbose_name="Device modified"
|
593
|
+
),
|
594
|
+
),
|
595
|
+
(
|
596
|
+
"locale_created",
|
597
|
+
models.CharField(
|
598
|
+
blank=True,
|
599
|
+
help_text="Auto-updated by Modeladmin",
|
600
|
+
max_length=10,
|
601
|
+
null=True,
|
602
|
+
verbose_name="Locale created",
|
603
|
+
),
|
604
|
+
),
|
605
|
+
(
|
606
|
+
"locale_modified",
|
607
|
+
models.CharField(
|
608
|
+
blank=True,
|
609
|
+
help_text="Auto-updated by Modeladmin",
|
610
|
+
max_length=10,
|
611
|
+
null=True,
|
612
|
+
verbose_name="Locale modified",
|
613
|
+
),
|
614
|
+
),
|
615
|
+
(
|
616
|
+
"id",
|
617
|
+
django_audit_fields.fields.uuid_auto_field.UUIDAutoField(
|
618
|
+
blank=True,
|
619
|
+
editable=False,
|
620
|
+
help_text="System auto field. UUID primary key.",
|
621
|
+
primary_key=True,
|
622
|
+
serialize=False,
|
623
|
+
),
|
624
|
+
),
|
625
|
+
("subject_identifier", models.CharField(max_length=50)),
|
626
|
+
("report_datetime", models.DateTimeField()),
|
627
|
+
("row_index", models.IntegerField(null=True)),
|
628
|
+
("sid", models.IntegerField(verbose_name="SID")),
|
629
|
+
(
|
630
|
+
"visit_no",
|
631
|
+
models.IntegerField(blank=True, null=True, verbose_name="Visit Number"),
|
632
|
+
),
|
633
|
+
("dispensed_sid", models.IntegerField(verbose_name="Dispensed SID")),
|
634
|
+
(
|
635
|
+
"updated_visit_no",
|
636
|
+
models.IntegerField(blank=True, null=True, verbose_name="Visit Number"),
|
637
|
+
),
|
638
|
+
(
|
639
|
+
"updated_subject_identifier",
|
640
|
+
models.CharField(
|
641
|
+
blank=True, max_length=50, null=True, verbose_name="Taken from subject"
|
642
|
+
),
|
643
|
+
),
|
644
|
+
(
|
645
|
+
"arm_match",
|
646
|
+
models.CharField(
|
647
|
+
choices=[
|
648
|
+
("Yes", "Yes"),
|
649
|
+
("No", "No"),
|
650
|
+
("not_evaluated", "Not evaluated"),
|
651
|
+
],
|
652
|
+
default="not_evaluated",
|
653
|
+
max_length=15,
|
654
|
+
),
|
655
|
+
),
|
656
|
+
("notes", models.TextField(verbose_name="Notes")),
|
657
|
+
(
|
658
|
+
"site",
|
659
|
+
models.ForeignKey(
|
660
|
+
null=True,
|
661
|
+
on_delete=django.db.models.deletion.PROTECT,
|
662
|
+
related_name="+",
|
663
|
+
to="sites.site",
|
664
|
+
),
|
665
|
+
),
|
666
|
+
(
|
667
|
+
"rx",
|
668
|
+
models.ForeignKey(
|
669
|
+
blank=True,
|
670
|
+
null=True,
|
671
|
+
on_delete=django.db.models.deletion.PROTECT,
|
672
|
+
to="meta_pharmacy.rx",
|
673
|
+
),
|
674
|
+
),
|
675
|
+
],
|
676
|
+
options={
|
677
|
+
"verbose_name": "IMP Substitution",
|
678
|
+
"verbose_name_plural": "IMP Substitutions",
|
679
|
+
"abstract": False,
|
680
|
+
"default_permissions": ("add", "change", "delete", "view", "export", "import"),
|
681
|
+
"default_manager_name": "objects",
|
682
|
+
"indexes": [
|
683
|
+
models.Index(
|
684
|
+
fields=["sid", "dispensed_sid", "subject_identifier"],
|
685
|
+
name="meta_pharma_sid_8172c4_idx",
|
686
|
+
),
|
687
|
+
models.Index(fields=["row_index"], name="meta_pharma_row_ind_d06d33_idx"),
|
688
|
+
],
|
689
|
+
},
|
690
|
+
managers=[
|
691
|
+
("objects", meta_pharmacy.models.MyManager()),
|
692
|
+
("on_site", edc_sites.managers.CurrentSiteManager()),
|
693
|
+
],
|
694
|
+
),
|
695
|
+
]
|