endoreg-db 0.3.6__py3-none-any.whl → 0.3.8__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (351) hide show
  1. endoreg_db/admin.py +3 -3
  2. endoreg_db/apps.py +6 -6
  3. endoreg_db/data/__init__.py +67 -64
  4. endoreg_db/data/active_model/data.yaml +2 -2
  5. endoreg_db/data/case_template/rule/00_patient_lab_sample_add_default_value.yaml +167 -167
  6. endoreg_db/data/case_template/rule/01_patient-set-age.yaml +7 -7
  7. endoreg_db/data/case_template/rule/01_patient-set-gender.yaml +8 -8
  8. endoreg_db/data/case_template/rule/11_create_patient_lab_sample.yaml +22 -22
  9. endoreg_db/data/case_template/rule/12_create-patient_medication-anticoagulation.yaml +18 -18
  10. endoreg_db/data/case_template/rule/13_create-patient_medication_schedule-anticoagulation.yaml +18 -18
  11. endoreg_db/data/case_template/rule/19_create_patient.yaml +16 -16
  12. endoreg_db/data/case_template/rule_type/base_types.yaml +35 -35
  13. endoreg_db/data/case_template/rule_value/.init +0 -0
  14. endoreg_db/data/case_template/rule_value_type/base_types.yaml +58 -58
  15. endoreg_db/data/case_template/template/base.yaml +7 -7
  16. endoreg_db/data/case_template/template_type/pre_endoscopy.yaml +2 -2
  17. endoreg_db/data/case_template/tmp/_rule_value +13 -13
  18. endoreg_db/data/case_template/tmp/rule/01_atrial_fibrillation.yaml +21 -21
  19. endoreg_db/data/case_template/tmp/rule/02_create_object.yaml +9 -9
  20. endoreg_db/data/case_template/tmp/template/atrial_fibrillation_low_risk.yaml +6 -6
  21. endoreg_db/data/center/data.yaml +59 -59
  22. endoreg_db/data/center_resource/green_endoscopy_dashboard_CenterResource.yaml +144 -144
  23. endoreg_db/data/center_waste/green_endoscopy_dashboard_CenterWaste.yaml +48 -48
  24. endoreg_db/data/disease/cardiovascular.yaml +37 -37
  25. endoreg_db/data/disease/hepatology.yaml +4 -4
  26. endoreg_db/data/disease/misc.yaml +5 -5
  27. endoreg_db/data/disease/renal.yaml +4 -4
  28. endoreg_db/data/disease_classification/chronic_kidney_disease.yaml +5 -5
  29. endoreg_db/data/disease_classification/coronary_vessel_disease.yaml +5 -5
  30. endoreg_db/data/disease_classification_choice/chronic_kidney_disease.yaml +40 -40
  31. endoreg_db/data/disease_classification_choice/coronary_vessel_disease.yaml +19 -19
  32. endoreg_db/data/distribution/date/patient.yaml +6 -6
  33. endoreg_db/data/distribution/multiple_categorical/.init +0 -0
  34. endoreg_db/data/distribution/numeric/.init +0 -0
  35. endoreg_db/data/distribution/single_categorical/patient.yaml +6 -6
  36. endoreg_db/data/emission_factor/green_endoscopy_dashboard_EmissionFactor.yaml +132 -132
  37. endoreg_db/data/endoscope_type/data.yaml +10 -10
  38. endoreg_db/data/endoscopy_processor/data.yaml +45 -45
  39. endoreg_db/data/event/cardiology.yaml +27 -27
  40. endoreg_db/data/event/neurology.yaml +13 -13
  41. endoreg_db/data/event/surgery.yaml +12 -12
  42. endoreg_db/data/event/thrombembolism.yaml +19 -19
  43. endoreg_db/data/examination/examinations/data.yaml +65 -65
  44. endoreg_db/data/examination/time/data.yaml +47 -47
  45. endoreg_db/data/examination/time-type/data.yaml +7 -7
  46. endoreg_db/data/examination/type/data.yaml +5 -5
  47. endoreg_db/data/gender/data.yaml +18 -18
  48. endoreg_db/data/information_source/data.yaml +30 -30
  49. endoreg_db/data/information_source/medication.yaml +5 -5
  50. endoreg_db/data/lab_value/cardiac_enzymes.yaml +30 -30
  51. endoreg_db/data/lab_value/coagulation.yaml +48 -48
  52. endoreg_db/data/lab_value/electrolytes.yaml +189 -189
  53. endoreg_db/data/lab_value/gastrointestinal_function.yaml +121 -121
  54. endoreg_db/data/lab_value/hematology.yaml +169 -169
  55. endoreg_db/data/lab_value/hormones.yaml +53 -53
  56. endoreg_db/data/lab_value/lipids.yaml +44 -44
  57. endoreg_db/data/lab_value/misc.yaml +30 -30
  58. endoreg_db/data/lab_value/renal_function.yaml +10 -10
  59. endoreg_db/data/label/label/data.yaml +62 -62
  60. endoreg_db/data/label/label-set/data.yaml +17 -17
  61. endoreg_db/data/label/label-type/data.yaml +6 -6
  62. endoreg_db/data/medication/anticoagulation.yaml +64 -64
  63. endoreg_db/data/medication/tah.yaml +69 -69
  64. endoreg_db/data/medication_indication/anticoagulation.yaml +120 -120
  65. endoreg_db/data/medication_indication_type/data.yaml +10 -10
  66. endoreg_db/data/medication_indication_type/thrombembolism.yaml +40 -40
  67. endoreg_db/data/medication_intake_time/base.yaml +30 -30
  68. endoreg_db/data/medication_schedule/apixaban.yaml +94 -94
  69. endoreg_db/data/medication_schedule/ass.yaml +12 -12
  70. endoreg_db/data/medication_schedule/enoxaparin.yaml +26 -26
  71. endoreg_db/data/model_type/data.yaml +6 -6
  72. endoreg_db/data/network_device/data.yaml +17 -0
  73. endoreg_db/data/network_device_type/data.yaml +8 -0
  74. endoreg_db/data/patient_lab_sample_type/generic.yaml +5 -5
  75. endoreg_db/data/pdf_type/data.yaml +28 -28
  76. endoreg_db/data/product/green_endoscopy_dashboard_Product.yaml +66 -66
  77. endoreg_db/data/product_group/green_endoscopy_dashboard_ProductGroup.yaml +33 -33
  78. endoreg_db/data/product_material/green_endoscopy_dashboard_ProductMaterial.yaml +308 -308
  79. endoreg_db/data/product_weight/green_endoscopy_dashboard_ProductWeight.yaml +88 -88
  80. endoreg_db/data/profession/data.yaml +70 -70
  81. endoreg_db/data/reference_product/green_endoscopy_dashboard_ReferenceProduct.yaml +55 -55
  82. endoreg_db/data/report_reader_flag/ukw-examination-generic.yaml +26 -26
  83. endoreg_db/data/report_reader_flag/ukw-histology-generic.yaml +19 -19
  84. endoreg_db/data/resource/green_endoscopy_dashboard_Resource.yaml +15 -15
  85. endoreg_db/data/transport_route/green_endoscopy_dashboard_TransportRoute.yaml +12 -12
  86. endoreg_db/data/unit/concentration.yaml +92 -92
  87. endoreg_db/data/unit/data.yaml +17 -17
  88. endoreg_db/data/unit/length.yaml +30 -30
  89. endoreg_db/data/unit/misc.yaml +19 -19
  90. endoreg_db/data/unit/rate.yaml +5 -5
  91. endoreg_db/data/unit/time.yaml +12 -12
  92. endoreg_db/data/unit/volume.yaml +35 -35
  93. endoreg_db/data/unit/weight.yaml +37 -37
  94. endoreg_db/data/waste/data.yaml +11 -11
  95. endoreg_db/forms/__init__.py +2 -2
  96. endoreg_db/forms/questionnaires/tto_questionnaire.py +23 -23
  97. endoreg_db/forms/settings/__init__.py +8 -8
  98. endoreg_db/forms/unit.py +5 -5
  99. endoreg_db/management/commands/_load_model_template.py +40 -40
  100. endoreg_db/management/commands/delete_all.py +18 -18
  101. endoreg_db/management/commands/delete_legacy_images.py +19 -19
  102. endoreg_db/management/commands/delete_legacy_videos.py +16 -16
  103. endoreg_db/management/commands/extract_legacy_video_frames.py +18 -18
  104. endoreg_db/management/commands/fetch_legacy_image_dataset.py +32 -32
  105. endoreg_db/management/commands/fix_auth_permission.py +20 -20
  106. endoreg_db/management/commands/import_legacy_images.py +94 -94
  107. endoreg_db/management/commands/import_legacy_videos.py +76 -76
  108. endoreg_db/management/commands/load_active_model_data.py +44 -44
  109. endoreg_db/management/commands/load_ai_model_data.py +44 -44
  110. endoreg_db/management/commands/load_base_db_data.py +132 -128
  111. endoreg_db/management/commands/load_center_data.py +42 -42
  112. endoreg_db/management/commands/load_disease_classification_choices_data.py +40 -40
  113. endoreg_db/management/commands/load_disease_classification_data.py +40 -40
  114. endoreg_db/management/commands/load_disease_data.py +39 -39
  115. endoreg_db/management/commands/load_distribution_data.py +65 -65
  116. endoreg_db/management/commands/load_endoscope_type_data.py +44 -44
  117. endoreg_db/management/commands/load_endoscopy_processor_data.py +44 -44
  118. endoreg_db/management/commands/load_event_data.py +40 -40
  119. endoreg_db/management/commands/load_examination_data.py +74 -74
  120. endoreg_db/management/commands/load_g_play_data.py +112 -112
  121. endoreg_db/management/commands/load_gender_data.py +43 -43
  122. endoreg_db/management/commands/load_green_endoscopy_wuerzburg_data.py +132 -132
  123. endoreg_db/management/commands/load_information_source.py +44 -44
  124. endoreg_db/management/commands/load_lab_value_data.py +49 -49
  125. endoreg_db/management/commands/load_label_data.py +66 -66
  126. endoreg_db/management/commands/load_medication_data.py +40 -40
  127. endoreg_db/management/commands/load_medication_indication_data.py +62 -62
  128. endoreg_db/management/commands/load_medication_indication_type_data.py +40 -40
  129. endoreg_db/management/commands/load_medication_intake_time_data.py +40 -40
  130. endoreg_db/management/commands/load_medication_schedule_data.py +54 -54
  131. endoreg_db/management/commands/load_network_data.py +49 -0
  132. endoreg_db/management/commands/load_pdf_type_data.py +60 -60
  133. endoreg_db/management/commands/load_profession_data.py +43 -43
  134. endoreg_db/management/commands/load_report_reader_flag.py +45 -45
  135. endoreg_db/management/commands/load_unit_data.py +45 -45
  136. endoreg_db/management/commands/load_user_groups.py +28 -28
  137. endoreg_db/management/commands/register_ai_model.py +65 -65
  138. endoreg_db/management/commands/reset_celery_schedule.py +9 -9
  139. endoreg_db/migrations/0001_initial.py +582 -582
  140. endoreg_db/migrations/0002_rawvideofile.py +26 -26
  141. endoreg_db/migrations/0003_rawvideofile_frames_required.py +18 -18
  142. endoreg_db/migrations/0004_rename_hash_rawvideofile_video_hash.py +18 -18
  143. endoreg_db/migrations/0005_ffmpegmeta_remove_videoimportmeta_center_and_more.py +56 -56
  144. endoreg_db/migrations/0006_rawvideofile_center_alter_videometa_processor.py +25 -25
  145. endoreg_db/migrations/0007_rawvideofile_processor.py +19 -19
  146. endoreg_db/migrations/0008_rename_frames_required_rawvideofile_state_frames_required.py +18 -18
  147. endoreg_db/migrations/0009_sensitivemeta_rawvideofile_sensitive_meta.py +31 -31
  148. endoreg_db/migrations/0010_rename_endoscope_serial_number_sensitivemeta_endoscope_sn.py +18 -18
  149. endoreg_db/migrations/0011_rawvideofile_state_sensitive_data_retrieved.py +18 -18
  150. endoreg_db/migrations/0012_rawvideofile_prediction_dir_and_more.py +109 -109
  151. endoreg_db/migrations/0013_rawpdffile.py +31 -31
  152. endoreg_db/migrations/0014_pdftype_alter_rawpdffile_file_pdfmeta.py +38 -38
  153. endoreg_db/migrations/0015_rename_report_processed_rawpdffile_state_report_processed_and_more.py +31 -31
  154. endoreg_db/migrations/0016_rawpdffile_state_report_processing_required.py +18 -18
  155. endoreg_db/migrations/0017_firstname_lastname_center_first_names_and_more.py +37 -37
  156. endoreg_db/migrations/0018_reportreaderflag_reportreaderconfig.py +37 -37
  157. endoreg_db/migrations/0019_pdftype_cut_off_above_lines_and_more.py +42 -42
  158. endoreg_db/migrations/0020_rename_endoscopy_info_line_pdftype_endoscope_info_line.py +18 -18
  159. endoreg_db/migrations/0021_alter_pdftype_endoscope_info_line.py +19 -19
  160. endoreg_db/migrations/0022_alter_pdftype_endoscope_info_line.py +19 -19
  161. endoreg_db/migrations/0023_ttoquestionnaire_alter_pdftype_endoscope_info_line.py +59 -59
  162. endoreg_db/migrations/0024_remove_ttoquestionnaire_infections_and_more.py +27 -27
  163. endoreg_db/migrations/0025_event_alter_rawpdffile_file_patientevent.py +42 -42
  164. endoreg_db/migrations/0026_disease_diseaseclassification_and_more.py +166 -166
  165. endoreg_db/migrations/0027_labvalue_abbreviation_labvalue_default_normal_range_and_more.py +38 -38
  166. endoreg_db/migrations/0028_alter_unit_abbreviation.py +18 -18
  167. endoreg_db/migrations/0029_medicationintaketime_and_more.py +75 -75
  168. endoreg_db/migrations/0030_medicationindicationtype_and_more.py +101 -101
  169. endoreg_db/migrations/0031_rename_adapt_to_liver_function_medication_adapt_to_age_and_more.py +38 -38
  170. endoreg_db/migrations/0032_alter_medicationschedule_therapy_duration_d.py +18 -18
  171. endoreg_db/migrations/0033_medicationindication_sources.py +18 -18
  172. endoreg_db/migrations/0034_alter_rawpdffile_file.py +20 -20
  173. endoreg_db/migrations/0035_alter_medicationindication_sources.py +18 -18
  174. endoreg_db/migrations/0036_alter_rawpdffile_file.py +20 -20
  175. endoreg_db/migrations/0037_alter_medicationindication_sources.py +18 -18
  176. endoreg_db/migrations/0038_emissionfactor_material_product_productgroup_and_more.py +164 -164
  177. endoreg_db/migrations/0039_referenceproduct_name.py +19 -19
  178. endoreg_db/migrations/0040_quizanswertype_quizquestiontype_quizquestion_and_more.py +50 -50
  179. endoreg_db/migrations/0041_gender_patientmedication_medication_indication_and_more.py +40 -40
  180. endoreg_db/migrations/0042_casetemplateruletype_casetemplaterulevalue_and_more.py +74 -74
  181. endoreg_db/migrations/0043_casetemplatetype_name_de_casetemplatetype_name_en.py +23 -23
  182. endoreg_db/migrations/0044_casetemplateruletype_name_de_and_more.py +23 -23
  183. endoreg_db/migrations/0045_casetemplaterulevalue_value_type.py +19 -19
  184. endoreg_db/migrations/0046_casetemplaterulevalue_target_field.py +18 -18
  185. endoreg_db/migrations/0047_casetemplaterule_target_model.py +18 -18
  186. endoreg_db/migrations/0048_remove_casetemplaterule_chained_rules_and_more.py +22 -22
  187. endoreg_db/migrations/0049_remove_casetemplaterule_rule_values.py +17 -17
  188. endoreg_db/migrations/0050_casetemplaterule_rule_values.py +18 -18
  189. endoreg_db/migrations/0051_remove_casetemplaterule_calling_rules_and_more.py +27 -27
  190. endoreg_db/migrations/0052_rename_case_template_type_casetemplate_template_type.py +18 -18
  191. endoreg_db/migrations/0053_patientlabsampletype_patientlabsample_and_more.py +38 -38
  192. endoreg_db/migrations/0054_multiplecategoricalvaluedistribution_and_more.py +69 -69
  193. endoreg_db/migrations/0055_remove_casetemplaterule_rule_values_and_more.py +59 -59
  194. endoreg_db/migrations/0056_datevaluedistribution_and_more.py +32 -32
  195. endoreg_db/migrations/0057_remove_datevaluedistribution_max_date_and_more.py +72 -72
  196. endoreg_db/migrations/0058_datevaluedistribution_description_and_more.py +28 -28
  197. endoreg_db/migrations/0059_casetemplaterule_rule_values.py +18 -18
  198. endoreg_db/migrations/0060_labvalue__default_date_value_distribution_and_more.py +44 -44
  199. endoreg_db/migrations/0061_remove_patientlabvalue_date_patientlabvalue_datetime.py +24 -24
  200. endoreg_db/migrations/0062_labvalue_numeric_precision.py +18 -18
  201. endoreg_db/migrations/0063_alter_labvalue_numeric_precision.py +18 -18
  202. endoreg_db/migrations/0064_casetemplaterule_extra_parameters_and_more.py +23 -23
  203. endoreg_db/migrations/0065_rename__date_value_distribution_casetemplaterule_date_value_distribution_and_more.py +58 -58
  204. endoreg_db/migrations/0066_alter_patientlabvalue_patient_and_more.py +29 -29
  205. endoreg_db/migrations/0067_alter_medicationindication_indication_type.py +19 -19
  206. endoreg_db/migrations/0068_networkdevicetype_networkdevicetypemanager_and_more.py +57 -0
  207. endoreg_db/models/__init__.py +75 -74
  208. endoreg_db/models/ai_model/__init__.py +3 -3
  209. endoreg_db/models/ai_model/active_model.py +9 -9
  210. endoreg_db/models/ai_model/model_meta.py +24 -24
  211. endoreg_db/models/ai_model/model_type.py +25 -25
  212. endoreg_db/models/ai_model/utils.py +8 -8
  213. endoreg_db/models/annotation/__init__.py +1 -1
  214. endoreg_db/models/annotation/binary_classification_annotation_task.py +80 -80
  215. endoreg_db/models/annotation/image_classification.py +26 -26
  216. endoreg_db/models/case_template/__init__.py +5 -5
  217. endoreg_db/models/case_template/case_template.py +81 -81
  218. endoreg_db/models/case_template/case_template_rule.py +276 -276
  219. endoreg_db/models/case_template/case_template_rule_value.py +73 -73
  220. endoreg_db/models/case_template/case_template_type.py +27 -27
  221. endoreg_db/models/center/__init__.py +4 -4
  222. endoreg_db/models/center/center.py +24 -24
  223. endoreg_db/models/center/center_product.py +33 -33
  224. endoreg_db/models/center/center_resource.py +18 -18
  225. endoreg_db/models/center/center_waste.py +10 -10
  226. endoreg_db/models/data_file/__init__.py +5 -5
  227. endoreg_db/models/data_file/base_classes/__init__.py +2 -2
  228. endoreg_db/models/data_file/base_classes/abstract_frame.py +50 -50
  229. endoreg_db/models/data_file/base_classes/abstract_video.py +200 -200
  230. endoreg_db/models/data_file/frame.py +45 -45
  231. endoreg_db/models/data_file/import_classes/__init__.py +31 -31
  232. endoreg_db/models/data_file/import_classes/processing_functions/__init__.py +34 -34
  233. endoreg_db/models/data_file/import_classes/processing_functions/pdf.py +28 -28
  234. endoreg_db/models/data_file/import_classes/processing_functions/video.py +260 -260
  235. endoreg_db/models/data_file/import_classes/raw_pdf.py +188 -188
  236. endoreg_db/models/data_file/import_classes/raw_video.py +343 -343
  237. endoreg_db/models/data_file/metadata/__init__.py +3 -3
  238. endoreg_db/models/data_file/metadata/pdf_meta.py +70 -70
  239. endoreg_db/models/data_file/metadata/sensitive_meta.py +31 -31
  240. endoreg_db/models/data_file/metadata/video_meta.py +132 -132
  241. endoreg_db/models/data_file/report_file.py +89 -89
  242. endoreg_db/models/data_file/video/__init__.py +6 -6
  243. endoreg_db/models/data_file/video/import_meta.py +25 -25
  244. endoreg_db/models/data_file/video/video.py +25 -25
  245. endoreg_db/models/data_file/video_segment.py +107 -107
  246. endoreg_db/models/disease.py +55 -55
  247. endoreg_db/models/emission/emission_factor.py +19 -19
  248. endoreg_db/models/event.py +21 -21
  249. endoreg_db/models/examination/__init__.py +3 -3
  250. endoreg_db/models/examination/examination.py +26 -26
  251. endoreg_db/models/examination/examination_time.py +27 -27
  252. endoreg_db/models/examination/examination_time_type.py +24 -24
  253. endoreg_db/models/examination/examination_type.py +18 -18
  254. endoreg_db/models/hardware/__init__.py +1 -1
  255. endoreg_db/models/hardware/endoscope.py +44 -44
  256. endoreg_db/models/hardware/endoscopy_processor.py +143 -143
  257. endoreg_db/models/information_source.py +29 -29
  258. endoreg_db/models/label/label.py +84 -84
  259. endoreg_db/models/laboratory/lab_value.py +102 -102
  260. endoreg_db/models/legacy_data/__init__.py +3 -3
  261. endoreg_db/models/legacy_data/image.py +34 -34
  262. endoreg_db/models/medication/medication.py +148 -148
  263. endoreg_db/models/network/__init__.py +2 -0
  264. endoreg_db/models/network/network_device.py +27 -0
  265. endoreg_db/models/network/network_device_type.py +23 -0
  266. endoreg_db/models/other/__init__.py +4 -4
  267. endoreg_db/models/other/distribution.py +215 -215
  268. endoreg_db/models/other/material.py +16 -16
  269. endoreg_db/models/other/resource.py +17 -17
  270. endoreg_db/models/other/transport_route.py +20 -20
  271. endoreg_db/models/other/waste.py +20 -20
  272. endoreg_db/models/patient_examination/__init__.py +35 -35
  273. endoreg_db/models/permissions/__init__.py +44 -44
  274. endoreg_db/models/persons/__init__.py +6 -6
  275. endoreg_db/models/persons/examiner/__init__.py +1 -1
  276. endoreg_db/models/persons/examiner/examiner.py +15 -15
  277. endoreg_db/models/persons/examiner/examiner_type.py +1 -1
  278. endoreg_db/models/persons/first_name.py +17 -17
  279. endoreg_db/models/persons/gender.py +22 -22
  280. endoreg_db/models/persons/last_name.py +19 -19
  281. endoreg_db/models/persons/patient/__init__.py +7 -7
  282. endoreg_db/models/persons/patient/case/case.py +30 -30
  283. endoreg_db/models/persons/patient/patient.py +216 -216
  284. endoreg_db/models/persons/patient/patient_disease.py +16 -16
  285. endoreg_db/models/persons/patient/patient_event.py +22 -22
  286. endoreg_db/models/persons/patient/patient_lab_sample.py +106 -106
  287. endoreg_db/models/persons/patient/patient_lab_value.py +176 -176
  288. endoreg_db/models/persons/patient/patient_medication.py +43 -43
  289. endoreg_db/models/persons/patient/patient_medication_schedule.py +27 -27
  290. endoreg_db/models/persons/person.py +31 -31
  291. endoreg_db/models/persons/portal_user_information.py +27 -27
  292. endoreg_db/models/prediction/__init__.py +1 -1
  293. endoreg_db/models/prediction/image_classification.py +37 -37
  294. endoreg_db/models/prediction/video_prediction_meta.py +244 -244
  295. endoreg_db/models/product/__init__.py +4 -4
  296. endoreg_db/models/product/product.py +97 -97
  297. endoreg_db/models/product/product_group.py +19 -19
  298. endoreg_db/models/product/product_material.py +24 -24
  299. endoreg_db/models/product/product_weight.py +26 -26
  300. endoreg_db/models/product/reference_product.py +99 -99
  301. endoreg_db/models/questionnaires/__init__.py +114 -114
  302. endoreg_db/models/quiz/__init__.py +1 -1
  303. endoreg_db/models/quiz/quiz_answer.py +41 -41
  304. endoreg_db/models/quiz/quiz_question.py +54 -54
  305. endoreg_db/models/report_reader/__init__.py +1 -1
  306. endoreg_db/models/report_reader/report_reader_config.py +53 -53
  307. endoreg_db/models/report_reader/report_reader_flag.py +19 -19
  308. endoreg_db/models/rules/__init__.py +4 -4
  309. endoreg_db/models/rules/rule.py +23 -23
  310. endoreg_db/models/rules/rule_applicator.py +224 -224
  311. endoreg_db/models/rules/rule_attribute_dtype.py +18 -18
  312. endoreg_db/models/rules/rule_type.py +21 -21
  313. endoreg_db/models/rules/ruleset.py +19 -19
  314. endoreg_db/models/unit.py +21 -21
  315. endoreg_db/queries/__init__.py +4 -4
  316. endoreg_db/queries/annotations/__init__.py +2 -2
  317. endoreg_db/queries/annotations/legacy.py +159 -159
  318. endoreg_db/queries/get/__init__.py +5 -5
  319. endoreg_db/queries/get/center.py +42 -42
  320. endoreg_db/queries/get/model.py +13 -13
  321. endoreg_db/queries/get/patient.py +14 -14
  322. endoreg_db/queries/get/patient_examination.py +20 -20
  323. endoreg_db/queries/get/report_file.py +33 -33
  324. endoreg_db/queries/get/video.py +31 -31
  325. endoreg_db/serializers/__init__.py +9 -9
  326. endoreg_db/serializers/ai_model.py +18 -18
  327. endoreg_db/serializers/annotation.py +17 -17
  328. endoreg_db/serializers/center.py +11 -11
  329. endoreg_db/serializers/examination.py +32 -32
  330. endoreg_db/serializers/frame.py +13 -13
  331. endoreg_db/serializers/hardware.py +20 -20
  332. endoreg_db/serializers/label.py +22 -22
  333. endoreg_db/serializers/patient.py +10 -10
  334. endoreg_db/serializers/prediction.py +15 -15
  335. endoreg_db/serializers/report_file.py +7 -7
  336. endoreg_db/serializers/video.py +27 -27
  337. endoreg_db/tests.py +3 -3
  338. endoreg_db/utils/cropping.py +28 -28
  339. endoreg_db/utils/dataloader.py +92 -92
  340. endoreg_db/utils/file_operations.py +30 -30
  341. endoreg_db/utils/hashs.py +33 -33
  342. endoreg_db/utils/legacy_ocr.py +201 -201
  343. endoreg_db/utils/ocr.py +197 -197
  344. endoreg_db/utils/uuid.py +4 -4
  345. endoreg_db/utils/video_metadata.py +87 -87
  346. endoreg_db/views.py +3 -3
  347. {endoreg_db-0.3.6.dist-info → endoreg_db-0.3.8.dist-info}/LICENSE +674 -674
  348. {endoreg_db-0.3.6.dist-info → endoreg_db-0.3.8.dist-info}/METADATA +3 -1
  349. endoreg_db-0.3.8.dist-info/RECORD +367 -0
  350. {endoreg_db-0.3.6.dist-info → endoreg_db-0.3.8.dist-info}/WHEEL +1 -1
  351. endoreg_db-0.3.6.dist-info/RECORD +0 -357
@@ -1,101 +1,101 @@
1
- # Generated by Django 4.2.11 on 2024-04-29 07:38
2
-
3
- from django.db import migrations, models
4
- import django.db.models.deletion
5
-
6
-
7
- class Migration(migrations.Migration):
8
-
9
- dependencies = [
10
- ('endoreg_db', '0029_medicationintaketime_and_more'),
11
- ]
12
-
13
- operations = [
14
- migrations.CreateModel(
15
- name='MedicationIndicationType',
16
- fields=[
17
- ('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
18
- ('name', models.CharField(max_length=255, unique=True)),
19
- ('name_de', models.CharField(blank=True, max_length=255, null=True)),
20
- ('name_en', models.CharField(blank=True, max_length=255, null=True)),
21
- ],
22
- ),
23
- migrations.RemoveField(
24
- model_name='medicationintaketime',
25
- name='unit',
26
- ),
27
- migrations.AddField(
28
- model_name='informationsource',
29
- name='date',
30
- field=models.DateField(blank=True, null=True),
31
- ),
32
- migrations.AddField(
33
- model_name='informationsource',
34
- name='description',
35
- field=models.TextField(blank=True, null=True),
36
- ),
37
- migrations.AddField(
38
- model_name='informationsource',
39
- name='url',
40
- field=models.URLField(blank=True, null=True),
41
- ),
42
- migrations.AddField(
43
- model_name='medicationintaketime',
44
- name='name',
45
- field=models.CharField(default=None, max_length=255),
46
- preserve_default=False,
47
- ),
48
- migrations.AddField(
49
- model_name='medicationintaketime',
50
- name='name_de',
51
- field=models.CharField(blank=True, max_length=255, null=True),
52
- ),
53
- migrations.AddField(
54
- model_name='medicationintaketime',
55
- name='name_en',
56
- field=models.CharField(blank=True, max_length=255, null=True),
57
- ),
58
- migrations.AddField(
59
- model_name='medicationschedule',
60
- name='description',
61
- field=models.TextField(blank=True, null=True),
62
- ),
63
- migrations.AddField(
64
- model_name='medicationschedule',
65
- name='dose',
66
- field=models.FloatField(default=1),
67
- preserve_default=False,
68
- ),
69
- migrations.AddField(
70
- model_name='medicationschedule',
71
- name='name_de',
72
- field=models.CharField(blank=True, max_length=255, null=True),
73
- ),
74
- migrations.AddField(
75
- model_name='medicationschedule',
76
- name='name_en',
77
- field=models.CharField(blank=True, max_length=255, null=True),
78
- ),
79
- migrations.AddField(
80
- model_name='medicationschedule',
81
- name='therapy_duration_d',
82
- field=models.DurationField(blank=True, null=True),
83
- ),
84
- migrations.AlterField(
85
- model_name='patientlabvalue',
86
- name='normal_range',
87
- field=models.JSONField(default=dict),
88
- ),
89
- migrations.CreateModel(
90
- name='MedicationIndication',
91
- fields=[
92
- ('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
93
- ('name', models.CharField(max_length=255, unique=True)),
94
- ('classification_choices', models.ManyToManyField(to='endoreg_db.diseaseclassificationchoice')),
95
- ('diseases', models.ManyToManyField(to='endoreg_db.disease')),
96
- ('events', models.ManyToManyField(to='endoreg_db.event')),
97
- ('indication_type', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='endoreg_db.medicationindicationtype')),
98
- ('medication_schedules', models.ManyToManyField(to='endoreg_db.medicationschedule')),
99
- ],
100
- ),
101
- ]
1
+ # Generated by Django 4.2.11 on 2024-04-29 07:38
2
+
3
+ from django.db import migrations, models
4
+ import django.db.models.deletion
5
+
6
+
7
+ class Migration(migrations.Migration):
8
+
9
+ dependencies = [
10
+ ('endoreg_db', '0029_medicationintaketime_and_more'),
11
+ ]
12
+
13
+ operations = [
14
+ migrations.CreateModel(
15
+ name='MedicationIndicationType',
16
+ fields=[
17
+ ('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
18
+ ('name', models.CharField(max_length=255, unique=True)),
19
+ ('name_de', models.CharField(blank=True, max_length=255, null=True)),
20
+ ('name_en', models.CharField(blank=True, max_length=255, null=True)),
21
+ ],
22
+ ),
23
+ migrations.RemoveField(
24
+ model_name='medicationintaketime',
25
+ name='unit',
26
+ ),
27
+ migrations.AddField(
28
+ model_name='informationsource',
29
+ name='date',
30
+ field=models.DateField(blank=True, null=True),
31
+ ),
32
+ migrations.AddField(
33
+ model_name='informationsource',
34
+ name='description',
35
+ field=models.TextField(blank=True, null=True),
36
+ ),
37
+ migrations.AddField(
38
+ model_name='informationsource',
39
+ name='url',
40
+ field=models.URLField(blank=True, null=True),
41
+ ),
42
+ migrations.AddField(
43
+ model_name='medicationintaketime',
44
+ name='name',
45
+ field=models.CharField(default=None, max_length=255),
46
+ preserve_default=False,
47
+ ),
48
+ migrations.AddField(
49
+ model_name='medicationintaketime',
50
+ name='name_de',
51
+ field=models.CharField(blank=True, max_length=255, null=True),
52
+ ),
53
+ migrations.AddField(
54
+ model_name='medicationintaketime',
55
+ name='name_en',
56
+ field=models.CharField(blank=True, max_length=255, null=True),
57
+ ),
58
+ migrations.AddField(
59
+ model_name='medicationschedule',
60
+ name='description',
61
+ field=models.TextField(blank=True, null=True),
62
+ ),
63
+ migrations.AddField(
64
+ model_name='medicationschedule',
65
+ name='dose',
66
+ field=models.FloatField(default=1),
67
+ preserve_default=False,
68
+ ),
69
+ migrations.AddField(
70
+ model_name='medicationschedule',
71
+ name='name_de',
72
+ field=models.CharField(blank=True, max_length=255, null=True),
73
+ ),
74
+ migrations.AddField(
75
+ model_name='medicationschedule',
76
+ name='name_en',
77
+ field=models.CharField(blank=True, max_length=255, null=True),
78
+ ),
79
+ migrations.AddField(
80
+ model_name='medicationschedule',
81
+ name='therapy_duration_d',
82
+ field=models.DurationField(blank=True, null=True),
83
+ ),
84
+ migrations.AlterField(
85
+ model_name='patientlabvalue',
86
+ name='normal_range',
87
+ field=models.JSONField(default=dict),
88
+ ),
89
+ migrations.CreateModel(
90
+ name='MedicationIndication',
91
+ fields=[
92
+ ('id', models.BigAutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
93
+ ('name', models.CharField(max_length=255, unique=True)),
94
+ ('classification_choices', models.ManyToManyField(to='endoreg_db.diseaseclassificationchoice')),
95
+ ('diseases', models.ManyToManyField(to='endoreg_db.disease')),
96
+ ('events', models.ManyToManyField(to='endoreg_db.event')),
97
+ ('indication_type', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='endoreg_db.medicationindicationtype')),
98
+ ('medication_schedules', models.ManyToManyField(to='endoreg_db.medicationschedule')),
99
+ ],
100
+ ),
101
+ ]
@@ -1,38 +1,38 @@
1
- # Generated by Django 4.2.11 on 2024-04-29 07:47
2
-
3
- from django.db import migrations, models
4
-
5
-
6
- class Migration(migrations.Migration):
7
-
8
- dependencies = [
9
- ('endoreg_db', '0030_medicationindicationtype_and_more'),
10
- ]
11
-
12
- operations = [
13
- migrations.RenameField(
14
- model_name='medication',
15
- old_name='adapt_to_liver_function',
16
- new_name='adapt_to_age',
17
- ),
18
- migrations.AddField(
19
- model_name='medication',
20
- name='adapt_to_hepatic_function',
21
- field=models.BooleanField(default=False),
22
- ),
23
- migrations.AddField(
24
- model_name='medication',
25
- name='adapt_to_indication',
26
- field=models.BooleanField(default=False),
27
- ),
28
- migrations.AddField(
29
- model_name='medication',
30
- name='adapt_to_risk',
31
- field=models.BooleanField(default=False),
32
- ),
33
- migrations.AddField(
34
- model_name='medication',
35
- name='adapt_to_weight',
36
- field=models.BooleanField(default=False),
37
- ),
38
- ]
1
+ # Generated by Django 4.2.11 on 2024-04-29 07:47
2
+
3
+ from django.db import migrations, models
4
+
5
+
6
+ class Migration(migrations.Migration):
7
+
8
+ dependencies = [
9
+ ('endoreg_db', '0030_medicationindicationtype_and_more'),
10
+ ]
11
+
12
+ operations = [
13
+ migrations.RenameField(
14
+ model_name='medication',
15
+ old_name='adapt_to_liver_function',
16
+ new_name='adapt_to_age',
17
+ ),
18
+ migrations.AddField(
19
+ model_name='medication',
20
+ name='adapt_to_hepatic_function',
21
+ field=models.BooleanField(default=False),
22
+ ),
23
+ migrations.AddField(
24
+ model_name='medication',
25
+ name='adapt_to_indication',
26
+ field=models.BooleanField(default=False),
27
+ ),
28
+ migrations.AddField(
29
+ model_name='medication',
30
+ name='adapt_to_risk',
31
+ field=models.BooleanField(default=False),
32
+ ),
33
+ migrations.AddField(
34
+ model_name='medication',
35
+ name='adapt_to_weight',
36
+ field=models.BooleanField(default=False),
37
+ ),
38
+ ]
@@ -1,18 +1,18 @@
1
- # Generated by Django 4.2.11 on 2024-04-29 07:52
2
-
3
- from django.db import migrations, models
4
-
5
-
6
- class Migration(migrations.Migration):
7
-
8
- dependencies = [
9
- ('endoreg_db', '0031_rename_adapt_to_liver_function_medication_adapt_to_age_and_more'),
10
- ]
11
-
12
- operations = [
13
- migrations.AlterField(
14
- model_name='medicationschedule',
15
- name='therapy_duration_d',
16
- field=models.FloatField(blank=True, null=True),
17
- ),
18
- ]
1
+ # Generated by Django 4.2.11 on 2024-04-29 07:52
2
+
3
+ from django.db import migrations, models
4
+
5
+
6
+ class Migration(migrations.Migration):
7
+
8
+ dependencies = [
9
+ ('endoreg_db', '0031_rename_adapt_to_liver_function_medication_adapt_to_age_and_more'),
10
+ ]
11
+
12
+ operations = [
13
+ migrations.AlterField(
14
+ model_name='medicationschedule',
15
+ name='therapy_duration_d',
16
+ field=models.FloatField(blank=True, null=True),
17
+ ),
18
+ ]
@@ -1,18 +1,18 @@
1
- # Generated by Django 4.2.11 on 2024-04-29 07:55
2
-
3
- from django.db import migrations, models
4
-
5
-
6
- class Migration(migrations.Migration):
7
-
8
- dependencies = [
9
- ('endoreg_db', '0032_alter_medicationschedule_therapy_duration_d'),
10
- ]
11
-
12
- operations = [
13
- migrations.AddField(
14
- model_name='medicationindication',
15
- name='sources',
16
- field=models.ManyToManyField(to='endoreg_db.informationsource'),
17
- ),
18
- ]
1
+ # Generated by Django 4.2.11 on 2024-04-29 07:55
2
+
3
+ from django.db import migrations, models
4
+
5
+
6
+ class Migration(migrations.Migration):
7
+
8
+ dependencies = [
9
+ ('endoreg_db', '0032_alter_medicationschedule_therapy_duration_d'),
10
+ ]
11
+
12
+ operations = [
13
+ migrations.AddField(
14
+ model_name='medicationindication',
15
+ name='sources',
16
+ field=models.ManyToManyField(to='endoreg_db.informationsource'),
17
+ ),
18
+ ]
@@ -1,20 +1,20 @@
1
- # Generated by Django 4.2.13 on 2024-05-30 04:16
2
-
3
- import django.core.files.storage
4
- import django.core.validators
5
- from django.db import migrations, models
6
-
7
-
8
- class Migration(migrations.Migration):
9
-
10
- dependencies = [
11
- ('endoreg_db', '0033_medicationindication_sources'),
12
- ]
13
-
14
- operations = [
15
- migrations.AlterField(
16
- model_name='rawpdffile',
17
- name='file',
18
- field=models.FileField(storage=django.core.files.storage.FileSystemStorage(location='/mnt/hdd-sensitive/Pseudo/import/pdf'), upload_to='raw_pdf/', validators=[django.core.validators.FileExtensionValidator(allowed_extensions=['pdf'])]),
19
- ),
20
- ]
1
+ # Generated by Django 4.2.13 on 2024-05-30 04:16
2
+
3
+ import django.core.files.storage
4
+ import django.core.validators
5
+ from django.db import migrations, models
6
+
7
+
8
+ class Migration(migrations.Migration):
9
+
10
+ dependencies = [
11
+ ('endoreg_db', '0033_medicationindication_sources'),
12
+ ]
13
+
14
+ operations = [
15
+ migrations.AlterField(
16
+ model_name='rawpdffile',
17
+ name='file',
18
+ field=models.FileField(storage=django.core.files.storage.FileSystemStorage(location='/mnt/hdd-sensitive/Pseudo/import/pdf'), upload_to='raw_pdf/', validators=[django.core.validators.FileExtensionValidator(allowed_extensions=['pdf'])]),
19
+ ),
20
+ ]
@@ -1,18 +1,18 @@
1
- # Generated by Django 4.2.13 on 2024-05-30 04:26
2
-
3
- from django.db import migrations, models
4
-
5
-
6
- class Migration(migrations.Migration):
7
-
8
- dependencies = [
9
- ('endoreg_db', '0034_alter_rawpdffile_file'),
10
- ]
11
-
12
- operations = [
13
- migrations.AlterField(
14
- model_name='medicationindication',
15
- name='sources',
16
- field=models.ManyToManyField(blank=True, null=True, to='endoreg_db.informationsource'),
17
- ),
18
- ]
1
+ # Generated by Django 4.2.13 on 2024-05-30 04:26
2
+
3
+ from django.db import migrations, models
4
+
5
+
6
+ class Migration(migrations.Migration):
7
+
8
+ dependencies = [
9
+ ('endoreg_db', '0034_alter_rawpdffile_file'),
10
+ ]
11
+
12
+ operations = [
13
+ migrations.AlterField(
14
+ model_name='medicationindication',
15
+ name='sources',
16
+ field=models.ManyToManyField(blank=True, null=True, to='endoreg_db.informationsource'),
17
+ ),
18
+ ]
@@ -1,20 +1,20 @@
1
- # Generated by Django 4.2.11 on 2024-06-06 12:42
2
-
3
- import django.core.files.storage
4
- import django.core.validators
5
- from django.db import migrations, models
6
-
7
-
8
- class Migration(migrations.Migration):
9
-
10
- dependencies = [
11
- ('endoreg_db', '0035_alter_medicationindication_sources'),
12
- ]
13
-
14
- operations = [
15
- migrations.AlterField(
16
- model_name='rawpdffile',
17
- name='file',
18
- field=models.FileField(storage=django.core.files.storage.FileSystemStorage(location='/home/agl-admin/case-generator/agl_case_generator/erc_data/raw_pdf'), upload_to='raw_pdf/', validators=[django.core.validators.FileExtensionValidator(allowed_extensions=['pdf'])]),
19
- ),
20
- ]
1
+ # Generated by Django 4.2.11 on 2024-06-06 12:42
2
+
3
+ import django.core.files.storage
4
+ import django.core.validators
5
+ from django.db import migrations, models
6
+
7
+
8
+ class Migration(migrations.Migration):
9
+
10
+ dependencies = [
11
+ ('endoreg_db', '0035_alter_medicationindication_sources'),
12
+ ]
13
+
14
+ operations = [
15
+ migrations.AlterField(
16
+ model_name='rawpdffile',
17
+ name='file',
18
+ field=models.FileField(storage=django.core.files.storage.FileSystemStorage(location='/home/agl-admin/case-generator/agl_case_generator/erc_data/raw_pdf'), upload_to='raw_pdf/', validators=[django.core.validators.FileExtensionValidator(allowed_extensions=['pdf'])]),
19
+ ),
20
+ ]
@@ -1,18 +1,18 @@
1
- # Generated by Django 4.2.11 on 2024-06-06 12:51
2
-
3
- from django.db import migrations, models
4
-
5
-
6
- class Migration(migrations.Migration):
7
-
8
- dependencies = [
9
- ('endoreg_db', '0036_alter_rawpdffile_file'),
10
- ]
11
-
12
- operations = [
13
- migrations.AlterField(
14
- model_name='medicationindication',
15
- name='sources',
16
- field=models.ManyToManyField(to='endoreg_db.informationsource'),
17
- ),
18
- ]
1
+ # Generated by Django 4.2.11 on 2024-06-06 12:51
2
+
3
+ from django.db import migrations, models
4
+
5
+
6
+ class Migration(migrations.Migration):
7
+
8
+ dependencies = [
9
+ ('endoreg_db', '0036_alter_rawpdffile_file'),
10
+ ]
11
+
12
+ operations = [
13
+ migrations.AlterField(
14
+ model_name='medicationindication',
15
+ name='sources',
16
+ field=models.ManyToManyField(to='endoreg_db.informationsource'),
17
+ ),
18
+ ]