endoreg-db 0.3.4__py3-none-any.whl → 0.3.6__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- endoreg_db/admin.py +3 -3
- endoreg_db/apps.py +6 -6
- endoreg_db/data/__init__.py +65 -16
- endoreg_db/data/active_model/data.yaml +2 -2
- endoreg_db/data/case_template/rule/00_patient_lab_sample_add_default_value.yaml +167 -0
- endoreg_db/data/case_template/rule/01_patient-set-age.yaml +8 -0
- endoreg_db/data/case_template/rule/01_patient-set-gender.yaml +9 -0
- endoreg_db/data/case_template/rule/11_create_patient_lab_sample.yaml +23 -0
- endoreg_db/data/case_template/rule/12_create-patient_medication-anticoagulation.yaml +19 -0
- endoreg_db/data/case_template/rule/13_create-patient_medication_schedule-anticoagulation.yaml +19 -0
- endoreg_db/data/case_template/rule/19_create_patient.yaml +17 -0
- endoreg_db/data/case_template/rule_type/base_types.yaml +35 -0
- endoreg_db/data/case_template/rule_value_type/base_types.yaml +59 -0
- endoreg_db/data/case_template/template/base.yaml +8 -0
- endoreg_db/data/case_template/template_type/pre_endoscopy.yaml +3 -0
- endoreg_db/data/case_template/tmp/_rule_value +13 -0
- endoreg_db/data/case_template/tmp/rule/01_atrial_fibrillation.yaml +21 -0
- endoreg_db/data/case_template/tmp/rule/02_create_object.yaml +10 -0
- endoreg_db/data/case_template/tmp/template/atrial_fibrillation_low_risk.yaml +7 -0
- endoreg_db/data/center/data.yaml +60 -52
- endoreg_db/data/center_resource/green_endoscopy_dashboard_CenterResource.yaml +144 -0
- endoreg_db/data/center_waste/green_endoscopy_dashboard_CenterWaste.yaml +48 -0
- endoreg_db/data/disease/cardiovascular.yaml +37 -0
- endoreg_db/data/disease/hepatology.yaml +5 -0
- endoreg_db/data/disease/misc.yaml +6 -0
- endoreg_db/data/disease/renal.yaml +5 -0
- endoreg_db/data/disease_classification/chronic_kidney_disease.yaml +6 -0
- endoreg_db/data/disease_classification/coronary_vessel_disease.yaml +6 -0
- endoreg_db/data/disease_classification_choice/chronic_kidney_disease.yaml +41 -0
- endoreg_db/data/disease_classification_choice/coronary_vessel_disease.yaml +20 -0
- endoreg_db/data/distribution/date/patient.yaml +7 -0
- endoreg_db/data/distribution/single_categorical/patient.yaml +7 -0
- endoreg_db/data/emission_factor/green_endoscopy_dashboard_EmissionFactor.yaml +132 -0
- endoreg_db/data/endoscope_type/data.yaml +10 -10
- endoreg_db/data/endoscopy_processor/data.yaml +45 -45
- endoreg_db/data/event/cardiology.yaml +28 -0
- endoreg_db/data/event/neurology.yaml +14 -0
- endoreg_db/data/event/surgery.yaml +13 -0
- endoreg_db/data/event/thrombembolism.yaml +20 -0
- endoreg_db/data/examination/examinations/data.yaml +65 -16
- endoreg_db/data/examination/time/data.yaml +47 -47
- endoreg_db/data/examination/time-type/data.yaml +7 -7
- endoreg_db/data/examination/type/data.yaml +5 -5
- endoreg_db/data/gender/data.yaml +18 -0
- endoreg_db/data/information_source/data.yaml +30 -30
- endoreg_db/data/information_source/medication.yaml +6 -0
- endoreg_db/data/lab_value/cardiac_enzymes.yaml +31 -0
- endoreg_db/data/lab_value/coagulation.yaml +49 -0
- endoreg_db/data/lab_value/electrolytes.yaml +190 -0
- endoreg_db/data/lab_value/gastrointestinal_function.yaml +121 -0
- endoreg_db/data/lab_value/hematology.yaml +169 -0
- endoreg_db/data/lab_value/hormones.yaml +53 -0
- endoreg_db/data/lab_value/lipids.yaml +44 -0
- endoreg_db/data/lab_value/misc.yaml +30 -0
- endoreg_db/data/lab_value/renal_function.yaml +11 -0
- endoreg_db/data/label/label/data.yaml +62 -62
- endoreg_db/data/label/label-set/data.yaml +17 -17
- endoreg_db/data/label/label-type/data.yaml +6 -6
- endoreg_db/data/material/material.yaml +91 -0
- endoreg_db/data/medication/anticoagulation.yaml +65 -0
- endoreg_db/data/medication/tah.yaml +70 -0
- endoreg_db/data/medication_indication/anticoagulation.yaml +120 -0
- endoreg_db/data/medication_indication_type/data.yaml +11 -0
- endoreg_db/data/medication_indication_type/thrombembolism.yaml +41 -0
- endoreg_db/data/medication_intake_time/base.yaml +31 -0
- endoreg_db/data/medication_schedule/apixaban.yaml +95 -0
- endoreg_db/data/medication_schedule/ass.yaml +12 -0
- endoreg_db/data/medication_schedule/enoxaparin.yaml +26 -0
- endoreg_db/data/model_type/data.yaml +6 -6
- endoreg_db/data/patient_lab_sample_type/generic.yaml +6 -0
- endoreg_db/data/pdf_type/data.yaml +28 -28
- endoreg_db/data/product/green_endoscopy_dashboard_Product.yaml +66 -0
- endoreg_db/data/product_group/green_endoscopy_dashboard_ProductGroup.yaml +33 -0
- endoreg_db/data/product_material/green_endoscopy_dashboard_ProductMaterial.yaml +308 -0
- endoreg_db/data/product_weight/green_endoscopy_dashboard_ProductWeight.yaml +88 -0
- endoreg_db/data/profession/data.yaml +70 -70
- endoreg_db/data/reference_product/green_endoscopy_dashboard_ReferenceProduct.yaml +55 -0
- endoreg_db/data/report_reader_flag/ukw-examination-generic.yaml +26 -26
- endoreg_db/data/report_reader_flag/ukw-histology-generic.yaml +19 -19
- endoreg_db/data/resource/green_endoscopy_dashboard_Resource.yaml +15 -0
- endoreg_db/data/tmp/chronic_kidney_disease.yaml +0 -0
- endoreg_db/data/tmp/congestive_heart_failure.yaml +0 -0
- endoreg_db/data/transport_route/green_endoscopy_dashboard_TransportRoute.yaml +12 -0
- endoreg_db/data/unit/concentration.yaml +92 -0
- endoreg_db/data/unit/data.yaml +17 -17
- endoreg_db/data/unit/length.yaml +30 -30
- endoreg_db/data/unit/misc.yaml +20 -0
- endoreg_db/data/unit/rate.yaml +6 -0
- endoreg_db/data/unit/time.yaml +13 -0
- endoreg_db/data/unit/volume.yaml +35 -26
- endoreg_db/data/unit/weight.yaml +37 -30
- endoreg_db/data/waste/data.yaml +12 -0
- endoreg_db/forms/__init__.py +2 -2
- endoreg_db/forms/questionnaires/tto_questionnaire.py +23 -23
- endoreg_db/forms/settings/__init__.py +8 -8
- endoreg_db/forms/unit.py +5 -5
- endoreg_db/management/commands/_load_model_template.py +40 -40
- endoreg_db/management/commands/delete_all.py +18 -18
- endoreg_db/management/commands/delete_legacy_images.py +19 -19
- endoreg_db/management/commands/delete_legacy_videos.py +16 -16
- endoreg_db/management/commands/extract_legacy_video_frames.py +18 -18
- endoreg_db/management/commands/fetch_legacy_image_dataset.py +32 -32
- endoreg_db/management/commands/fix_auth_permission.py +20 -20
- endoreg_db/management/commands/import_legacy_images.py +94 -94
- endoreg_db/management/commands/import_legacy_videos.py +76 -76
- endoreg_db/management/commands/load_active_model_data.py +44 -44
- endoreg_db/management/commands/load_ai_model_data.py +44 -44
- endoreg_db/management/commands/load_base_db_data.py +128 -71
- endoreg_db/management/commands/load_center_data.py +42 -42
- endoreg_db/management/commands/load_disease_classification_choices_data.py +41 -0
- endoreg_db/management/commands/load_disease_classification_data.py +41 -0
- endoreg_db/management/commands/load_disease_data.py +40 -0
- endoreg_db/management/commands/load_distribution_data.py +66 -0
- endoreg_db/management/commands/load_endoscope_type_data.py +44 -44
- endoreg_db/management/commands/load_endoscopy_processor_data.py +44 -44
- endoreg_db/management/commands/load_event_data.py +41 -0
- endoreg_db/management/commands/load_examination_data.py +74 -74
- endoreg_db/management/commands/load_g_play_data.py +113 -0
- endoreg_db/management/commands/load_gender_data.py +44 -0
- endoreg_db/management/commands/load_green_endoscopy_wuerzburg_data.py +133 -0
- endoreg_db/management/commands/load_information_source.py +44 -44
- endoreg_db/management/commands/load_lab_value_data.py +50 -0
- endoreg_db/management/commands/load_label_data.py +66 -66
- endoreg_db/management/commands/load_medication_data.py +41 -0
- endoreg_db/management/commands/load_medication_indication_data.py +63 -0
- endoreg_db/management/commands/load_medication_indication_type_data.py +41 -0
- endoreg_db/management/commands/load_medication_intake_time_data.py +41 -0
- endoreg_db/management/commands/load_medication_schedule_data.py +55 -0
- endoreg_db/management/commands/load_pdf_type_data.py +60 -60
- endoreg_db/management/commands/load_profession_data.py +43 -43
- endoreg_db/management/commands/load_report_reader_flag.py +45 -45
- endoreg_db/management/commands/load_unit_data.py +45 -45
- endoreg_db/management/commands/load_user_groups.py +28 -28
- endoreg_db/management/commands/register_ai_model.py +65 -65
- endoreg_db/management/commands/reset_celery_schedule.py +9 -9
- endoreg_db/migrations/0001_initial.py +582 -582
- endoreg_db/migrations/0002_rawvideofile.py +26 -26
- endoreg_db/migrations/0003_rawvideofile_frames_required.py +18 -18
- endoreg_db/migrations/0004_rename_hash_rawvideofile_video_hash.py +18 -18
- endoreg_db/migrations/0005_ffmpegmeta_remove_videoimportmeta_center_and_more.py +56 -56
- endoreg_db/migrations/0006_rawvideofile_center_alter_videometa_processor.py +25 -25
- endoreg_db/migrations/0007_rawvideofile_processor.py +19 -19
- endoreg_db/migrations/0008_rename_frames_required_rawvideofile_state_frames_required.py +18 -18
- endoreg_db/migrations/0009_sensitivemeta_rawvideofile_sensitive_meta.py +31 -31
- endoreg_db/migrations/0010_rename_endoscope_serial_number_sensitivemeta_endoscope_sn.py +18 -18
- endoreg_db/migrations/0011_rawvideofile_state_sensitive_data_retrieved.py +18 -18
- endoreg_db/migrations/0012_rawvideofile_prediction_dir_and_more.py +109 -109
- endoreg_db/migrations/0013_rawpdffile.py +31 -31
- endoreg_db/migrations/0014_pdftype_alter_rawpdffile_file_pdfmeta.py +38 -38
- endoreg_db/migrations/0015_rename_report_processed_rawpdffile_state_report_processed_and_more.py +31 -31
- endoreg_db/migrations/0016_rawpdffile_state_report_processing_required.py +18 -18
- endoreg_db/migrations/0017_firstname_lastname_center_first_names_and_more.py +37 -37
- endoreg_db/migrations/0018_reportreaderflag_reportreaderconfig.py +37 -37
- endoreg_db/migrations/0019_pdftype_cut_off_above_lines_and_more.py +42 -42
- endoreg_db/migrations/0020_rename_endoscopy_info_line_pdftype_endoscope_info_line.py +18 -18
- endoreg_db/migrations/0021_alter_pdftype_endoscope_info_line.py +19 -19
- endoreg_db/migrations/0022_alter_pdftype_endoscope_info_line.py +19 -19
- endoreg_db/migrations/0023_ttoquestionnaire_alter_pdftype_endoscope_info_line.py +59 -59
- endoreg_db/migrations/0024_remove_ttoquestionnaire_infections_and_more.py +27 -27
- endoreg_db/migrations/0025_event_alter_rawpdffile_file_patientevent.py +42 -0
- endoreg_db/migrations/0026_disease_diseaseclassification_and_more.py +166 -0
- endoreg_db/migrations/0027_labvalue_abbreviation_labvalue_default_normal_range_and_more.py +38 -0
- endoreg_db/migrations/0028_alter_unit_abbreviation.py +18 -0
- endoreg_db/migrations/0029_medicationintaketime_and_more.py +75 -0
- endoreg_db/migrations/0030_medicationindicationtype_and_more.py +101 -0
- endoreg_db/migrations/0031_rename_adapt_to_liver_function_medication_adapt_to_age_and_more.py +38 -0
- endoreg_db/migrations/0032_alter_medicationschedule_therapy_duration_d.py +18 -0
- endoreg_db/migrations/0033_medicationindication_sources.py +18 -0
- endoreg_db/migrations/0034_alter_rawpdffile_file.py +20 -0
- endoreg_db/migrations/0035_alter_medicationindication_sources.py +18 -0
- endoreg_db/migrations/0036_alter_rawpdffile_file.py +20 -0
- endoreg_db/migrations/0037_alter_medicationindication_sources.py +18 -0
- endoreg_db/migrations/0038_emissionfactor_material_product_productgroup_and_more.py +164 -0
- endoreg_db/migrations/0039_referenceproduct_name.py +19 -0
- endoreg_db/migrations/0040_quizanswertype_quizquestiontype_quizquestion_and_more.py +50 -0
- endoreg_db/migrations/0041_gender_patientmedication_medication_indication_and_more.py +40 -0
- endoreg_db/migrations/0042_casetemplateruletype_casetemplaterulevalue_and_more.py +74 -0
- endoreg_db/migrations/0043_casetemplatetype_name_de_casetemplatetype_name_en.py +23 -0
- endoreg_db/migrations/0044_casetemplateruletype_name_de_and_more.py +23 -0
- endoreg_db/migrations/0045_casetemplaterulevalue_value_type.py +19 -0
- endoreg_db/migrations/0046_casetemplaterulevalue_target_field.py +18 -0
- endoreg_db/migrations/0047_casetemplaterule_target_model.py +18 -0
- endoreg_db/migrations/0048_remove_casetemplaterule_chained_rules_and_more.py +22 -0
- endoreg_db/migrations/0049_remove_casetemplaterule_rule_values.py +17 -0
- endoreg_db/migrations/0050_casetemplaterule_rule_values.py +18 -0
- endoreg_db/migrations/0051_remove_casetemplaterule_calling_rules_and_more.py +27 -0
- endoreg_db/migrations/0052_rename_case_template_type_casetemplate_template_type.py +18 -0
- endoreg_db/migrations/0053_patientlabsampletype_patientlabsample_and_more.py +38 -0
- endoreg_db/migrations/0054_multiplecategoricalvaluedistribution_and_more.py +69 -0
- endoreg_db/migrations/0055_remove_casetemplaterule_rule_values_and_more.py +59 -0
- endoreg_db/migrations/0056_datevaluedistribution_and_more.py +32 -0
- endoreg_db/migrations/0057_remove_datevaluedistribution_max_date_and_more.py +72 -0
- endoreg_db/migrations/0058_datevaluedistribution_description_and_more.py +28 -0
- endoreg_db/migrations/0059_casetemplaterule_rule_values.py +18 -0
- endoreg_db/migrations/0060_labvalue__default_date_value_distribution_and_more.py +44 -0
- endoreg_db/migrations/0061_remove_patientlabvalue_date_patientlabvalue_datetime.py +24 -0
- endoreg_db/migrations/0062_labvalue_numeric_precision.py +18 -0
- endoreg_db/migrations/0063_alter_labvalue_numeric_precision.py +18 -0
- endoreg_db/migrations/0064_casetemplaterule_extra_parameters_and_more.py +23 -0
- endoreg_db/migrations/0065_rename__date_value_distribution_casetemplaterule_date_value_distribution_and_more.py +58 -0
- endoreg_db/migrations/0066_alter_patientlabvalue_patient_and_more.py +29 -0
- endoreg_db/migrations/0067_alter_medicationindication_indication_type.py +19 -0
- endoreg_db/models/__init__.py +74 -57
- endoreg_db/models/ai_model/__init__.py +3 -3
- endoreg_db/models/ai_model/active_model.py +9 -9
- endoreg_db/models/ai_model/model_meta.py +24 -24
- endoreg_db/models/ai_model/model_type.py +25 -25
- endoreg_db/models/ai_model/utils.py +8 -8
- endoreg_db/models/annotation/__init__.py +1 -1
- endoreg_db/models/annotation/binary_classification_annotation_task.py +80 -80
- endoreg_db/models/annotation/image_classification.py +26 -26
- endoreg_db/models/case_template/__init__.py +6 -0
- endoreg_db/models/case_template/case_template.py +81 -0
- endoreg_db/models/case_template/case_template_rule.py +276 -0
- endoreg_db/models/case_template/case_template_rule_value.py +73 -0
- endoreg_db/models/case_template/case_template_type.py +28 -0
- endoreg_db/models/center/__init__.py +4 -0
- endoreg_db/models/{center.py → center/center.py} +24 -24
- endoreg_db/models/center/center_product.py +34 -0
- endoreg_db/models/center/center_resource.py +19 -0
- endoreg_db/models/center/center_waste.py +11 -0
- endoreg_db/models/data_file/__init__.py +5 -5
- endoreg_db/models/data_file/base_classes/__init__.py +2 -2
- endoreg_db/models/data_file/base_classes/abstract_frame.py +50 -50
- endoreg_db/models/data_file/base_classes/abstract_video.py +200 -200
- endoreg_db/models/data_file/frame.py +45 -45
- endoreg_db/models/data_file/import_classes/__init__.py +31 -31
- endoreg_db/models/data_file/import_classes/processing_functions/__init__.py +34 -34
- endoreg_db/models/data_file/import_classes/processing_functions/pdf.py +28 -28
- endoreg_db/models/data_file/import_classes/processing_functions/video.py +260 -260
- endoreg_db/models/data_file/import_classes/raw_pdf.py +188 -185
- endoreg_db/models/data_file/import_classes/raw_video.py +343 -343
- endoreg_db/models/data_file/metadata/__init__.py +3 -3
- endoreg_db/models/data_file/metadata/pdf_meta.py +70 -70
- endoreg_db/models/data_file/metadata/sensitive_meta.py +31 -31
- endoreg_db/models/data_file/metadata/video_meta.py +132 -131
- endoreg_db/models/data_file/report_file.py +89 -89
- endoreg_db/models/data_file/video/__init__.py +6 -6
- endoreg_db/models/data_file/video/import_meta.py +25 -25
- endoreg_db/models/data_file/video/video.py +25 -25
- endoreg_db/models/data_file/video_segment.py +107 -107
- endoreg_db/models/disease.py +56 -0
- endoreg_db/models/emission/__init__.py +1 -0
- endoreg_db/models/emission/emission_factor.py +20 -0
- endoreg_db/models/event.py +22 -0
- endoreg_db/models/examination/__init__.py +3 -3
- endoreg_db/models/examination/examination.py +26 -26
- endoreg_db/models/examination/examination_time.py +27 -27
- endoreg_db/models/examination/examination_time_type.py +24 -24
- endoreg_db/models/examination/examination_type.py +18 -18
- endoreg_db/models/hardware/__init__.py +1 -1
- endoreg_db/models/hardware/endoscope.py +44 -44
- endoreg_db/models/hardware/endoscopy_processor.py +143 -143
- endoreg_db/models/information_source.py +29 -22
- endoreg_db/models/label/label.py +84 -84
- endoreg_db/models/laboratory/__init__.py +1 -0
- endoreg_db/models/laboratory/lab_value.py +102 -0
- endoreg_db/models/legacy_data/__init__.py +3 -3
- endoreg_db/models/legacy_data/image.py +34 -34
- endoreg_db/models/medication/__init__.py +1 -0
- endoreg_db/models/medication/medication.py +148 -0
- endoreg_db/models/other/__init__.py +5 -0
- endoreg_db/models/other/distribution.py +215 -0
- endoreg_db/models/other/material.py +16 -0
- endoreg_db/models/other/resource.py +18 -0
- endoreg_db/models/other/transport_route.py +21 -0
- endoreg_db/models/other/waste.py +20 -0
- endoreg_db/models/patient_examination/__init__.py +35 -35
- endoreg_db/models/permissions/__init__.py +44 -44
- endoreg_db/models/persons/__init__.py +7 -6
- endoreg_db/models/persons/examiner/__init__.py +1 -1
- endoreg_db/models/persons/examiner/examiner.py +15 -15
- endoreg_db/models/persons/examiner/examiner_type.py +1 -1
- endoreg_db/models/persons/first_name.py +17 -17
- endoreg_db/models/persons/gender.py +22 -0
- endoreg_db/models/persons/last_name.py +19 -19
- endoreg_db/models/persons/patient/__init__.py +8 -0
- endoreg_db/models/persons/patient/case/__init__.py +0 -0
- endoreg_db/models/persons/patient/case/case.py +30 -0
- endoreg_db/models/persons/patient/patient.py +216 -0
- endoreg_db/models/persons/patient/patient_disease.py +16 -0
- endoreg_db/models/persons/patient/patient_event.py +22 -0
- endoreg_db/models/persons/patient/patient_lab_sample.py +106 -0
- endoreg_db/models/persons/patient/patient_lab_value.py +176 -0
- endoreg_db/models/persons/patient/patient_medication.py +44 -0
- endoreg_db/models/persons/patient/patient_medication_schedule.py +28 -0
- endoreg_db/models/persons/person.py +31 -34
- endoreg_db/models/persons/portal_user_information.py +27 -29
- endoreg_db/models/prediction/__init__.py +1 -1
- endoreg_db/models/prediction/image_classification.py +37 -37
- endoreg_db/models/prediction/video_prediction_meta.py +244 -244
- endoreg_db/models/product/__init__.py +5 -0
- endoreg_db/models/product/product.py +97 -0
- endoreg_db/models/product/product_group.py +19 -0
- endoreg_db/models/product/product_material.py +24 -0
- endoreg_db/models/product/product_weight.py +26 -0
- endoreg_db/models/product/reference_product.py +99 -0
- endoreg_db/models/questionnaires/__init__.py +114 -114
- endoreg_db/models/quiz/__init__.py +2 -0
- endoreg_db/models/quiz/quiz_answer.py +41 -0
- endoreg_db/models/quiz/quiz_question.py +54 -0
- endoreg_db/models/report_reader/__init__.py +1 -1
- endoreg_db/models/report_reader/report_reader_config.py +53 -53
- endoreg_db/models/report_reader/report_reader_flag.py +19 -19
- endoreg_db/models/rules/__init__.py +5 -0
- endoreg_db/models/rules/rule.py +24 -0
- endoreg_db/models/rules/rule_applicator.py +224 -0
- endoreg_db/models/rules/rule_attribute_dtype.py +19 -0
- endoreg_db/models/rules/rule_type.py +22 -0
- endoreg_db/models/rules/ruleset.py +19 -0
- endoreg_db/models/unit.py +21 -19
- endoreg_db/queries/__init__.py +4 -4
- endoreg_db/queries/annotations/__init__.py +2 -2
- endoreg_db/queries/annotations/legacy.py +159 -159
- endoreg_db/queries/get/__init__.py +5 -5
- endoreg_db/queries/get/center.py +42 -42
- endoreg_db/queries/get/model.py +13 -13
- endoreg_db/queries/get/patient.py +14 -14
- endoreg_db/queries/get/patient_examination.py +20 -20
- endoreg_db/queries/get/report_file.py +33 -33
- endoreg_db/queries/get/video.py +31 -31
- endoreg_db/serializers/__init__.py +9 -9
- endoreg_db/serializers/ai_model.py +18 -18
- endoreg_db/serializers/annotation.py +17 -17
- endoreg_db/serializers/center.py +11 -11
- endoreg_db/serializers/examination.py +32 -32
- endoreg_db/serializers/frame.py +13 -13
- endoreg_db/serializers/hardware.py +20 -20
- endoreg_db/serializers/label.py +22 -22
- endoreg_db/serializers/patient.py +10 -10
- endoreg_db/serializers/prediction.py +15 -15
- endoreg_db/serializers/report_file.py +7 -7
- endoreg_db/serializers/video.py +27 -27
- endoreg_db/tests.py +3 -3
- endoreg_db/utils/cropping.py +28 -28
- endoreg_db/utils/dataloader.py +92 -185
- endoreg_db/utils/file_operations.py +30 -30
- endoreg_db/utils/hashs.py +33 -33
- endoreg_db/utils/legacy_ocr.py +201 -201
- endoreg_db/utils/ocr.py +197 -197
- endoreg_db/utils/uuid.py +4 -4
- endoreg_db/utils/video_metadata.py +87 -87
- endoreg_db/views.py +3 -3
- {endoreg_db-0.3.4.dist-info → endoreg_db-0.3.6.dist-info}/LICENSE +674 -674
- {endoreg_db-0.3.4.dist-info → endoreg_db-0.3.6.dist-info}/METADATA +2 -2
- endoreg_db-0.3.6.dist-info/RECORD +357 -0
- {endoreg_db-0.3.4.dist-info → endoreg_db-0.3.6.dist-info}/WHEEL +1 -1
- endoreg_db/models/persons/patient.py +0 -58
- endoreg_db/models.py +0 -3
- endoreg_db-0.3.4.dist-info/RECORD +0 -185
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unit: kilogram
|
|
7
|
+
verified: 0.074
|
|
8
|
+
model: endoreg_db.ProductWeight
|
|
9
|
+
- fields:
|
|
10
|
+
manufacturer: .nan
|
|
11
|
+
measured: .nan
|
|
12
|
+
name: weight_esophageal_dilator
|
|
13
|
+
product: esophageal_dilator
|
|
14
|
+
unit: kilogram
|
|
15
|
+
verified: 0.134
|
|
16
|
+
model: endoreg_db.ProductWeight
|
|
17
|
+
- fields:
|
|
18
|
+
manufacturer: 0.27
|
|
19
|
+
measured: 0.19
|
|
20
|
+
name: weight_visiglide_2
|
|
21
|
+
product: visiglide_2
|
|
22
|
+
unit: kilogram
|
|
23
|
+
verified: 0.194
|
|
24
|
+
model: endoreg_db.ProductWeight
|
|
25
|
+
- fields:
|
|
26
|
+
manufacturer: 0.037
|
|
27
|
+
measured: 0.234
|
|
28
|
+
name: weight_peg_freka_15_ch
|
|
29
|
+
product: peg_freka_15_ch
|
|
30
|
+
unit: kilogram
|
|
31
|
+
verified: 0.228
|
|
32
|
+
model: endoreg_db.ProductWeight
|
|
33
|
+
- fields:
|
|
34
|
+
manufacturer: 0.15
|
|
35
|
+
measured: 0.067
|
|
36
|
+
name: weight_biopsy_grasper_hot_radial_jaw_4
|
|
37
|
+
product: biopsy_grasper_hot_radial_jaw_4
|
|
38
|
+
unit: kilogram
|
|
39
|
+
verified: 0.076
|
|
40
|
+
model: endoreg_db.ProductWeight
|
|
41
|
+
- fields:
|
|
42
|
+
manufacturer: .nan
|
|
43
|
+
measured: .nan
|
|
44
|
+
name: weight_nitinol_stent_aix_oel
|
|
45
|
+
product: nitinol_stent_aix_oel
|
|
46
|
+
unit: kilogram
|
|
47
|
+
verified: 0.413
|
|
48
|
+
model: endoreg_db.ProductWeight
|
|
49
|
+
- fields:
|
|
50
|
+
manufacturer: .nan
|
|
51
|
+
measured: 0.061
|
|
52
|
+
name: weight_biliary_stent_cotton_leung_sof_flex
|
|
53
|
+
product: biliary_stent_cotton_leung_sof_flex
|
|
54
|
+
unit: kilogram
|
|
55
|
+
verified: 0.058
|
|
56
|
+
model: endoreg_db.ProductWeight
|
|
57
|
+
- fields:
|
|
58
|
+
manufacturer: .nan
|
|
59
|
+
measured: 0.014
|
|
60
|
+
name: weight_bite_protector
|
|
61
|
+
product: bite_protector
|
|
62
|
+
unit: kilogram
|
|
63
|
+
verified: 0.013
|
|
64
|
+
model: endoreg_db.ProductWeight
|
|
65
|
+
- fields:
|
|
66
|
+
manufacturer: 0.25
|
|
67
|
+
measured: 0.146
|
|
68
|
+
name: weight_pressure_syringe_60_ml
|
|
69
|
+
product: pressure_syringe_60_ml
|
|
70
|
+
unit: kilogram
|
|
71
|
+
verified: 0.143
|
|
72
|
+
model: endoreg_db.ProductWeight
|
|
73
|
+
- fields:
|
|
74
|
+
manufacturer: .nan
|
|
75
|
+
measured: 0.094
|
|
76
|
+
name: weight_foliodress_gown_standard
|
|
77
|
+
product: foliodress_gown_standard
|
|
78
|
+
unit: kilogram
|
|
79
|
+
verified: 0.036
|
|
80
|
+
model: endoreg_db.ProductWeight
|
|
81
|
+
- fields:
|
|
82
|
+
manufacturer: .nan
|
|
83
|
+
measured: 0.092
|
|
84
|
+
name: weight_absorbant_pad
|
|
85
|
+
product: absorbant_pad
|
|
86
|
+
unit: kilogram
|
|
87
|
+
verified: 0.057
|
|
88
|
+
model: endoreg_db.ProductWeight
|
|
@@ -1,70 +1,70 @@
|
|
|
1
|
-
- model: endoreg_db.Profession
|
|
2
|
-
fields:
|
|
3
|
-
name: "nurse"
|
|
4
|
-
name_de: "Pflegekraft"
|
|
5
|
-
name_en: "Nurse"
|
|
6
|
-
description: "Not further specified nurse"
|
|
7
|
-
|
|
8
|
-
# endoscopy nurse
|
|
9
|
-
- model: endoreg_db.Profession
|
|
10
|
-
fields:
|
|
11
|
-
name: "endoscopy-nurse"
|
|
12
|
-
name_de: "Pflegekraft (Endoskopie)"
|
|
13
|
-
name_en: "Endoscopy nurse"
|
|
14
|
-
description: "Endoscopy nurse"
|
|
15
|
-
|
|
16
|
-
- model: endoreg_db.Profession
|
|
17
|
-
fields:
|
|
18
|
-
name: "physician"
|
|
19
|
-
name_de: "Arzt"
|
|
20
|
-
name_en: "Physician"
|
|
21
|
-
description: "Not further specified doctor"
|
|
22
|
-
|
|
23
|
-
# Physician in training (gastroenterology)
|
|
24
|
-
- model: endoreg_db.Profession
|
|
25
|
-
fields:
|
|
26
|
-
name: "physician-in-training-gastroenterology"
|
|
27
|
-
name_de: "Arzt in Weiterbildung Gastroenterologie"
|
|
28
|
-
name_en: "Physician in training (gastroenterology)"
|
|
29
|
-
description: "Physician in training (gastroenterology)"
|
|
30
|
-
|
|
31
|
-
# Physician in training (internal medicine)
|
|
32
|
-
- model: endoreg_db.Profession
|
|
33
|
-
fields:
|
|
34
|
-
name: "physician-in-training-internal-medicine"
|
|
35
|
-
name_de: "Arzt in Weiterbildung Innere Medizin"
|
|
36
|
-
name_en: "Physician in training (internal medicine)"
|
|
37
|
-
description: "Physician in training (internal medicine)"
|
|
38
|
-
|
|
39
|
-
# Physician in training (general surgery)
|
|
40
|
-
- model: endoreg_db.Profession
|
|
41
|
-
fields:
|
|
42
|
-
name: "physician-in-training-general-surgery"
|
|
43
|
-
name_de: "Arzt in Weiterbildung Allgemeinchirurgie"
|
|
44
|
-
name_en: "Physician in training (general surgery)"
|
|
45
|
-
description: "Physician in training (general surgery)"
|
|
46
|
-
|
|
47
|
-
# Physician (Internal Medicine)
|
|
48
|
-
- model: endoreg_db.Profession
|
|
49
|
-
fields:
|
|
50
|
-
name: "physician-internal-medicine"
|
|
51
|
-
name_de: "Arzt Innere Medizin"
|
|
52
|
-
name_en: "Physician (Internal Medicine)"
|
|
53
|
-
description: "Physician (Internal Medicine)"
|
|
54
|
-
|
|
55
|
-
# Physician (Gastroenterology)
|
|
56
|
-
- model: endoreg_db.Profession
|
|
57
|
-
fields:
|
|
58
|
-
name: "physician-gastroenterology"
|
|
59
|
-
name_de: "Arzt Gastroenterologie"
|
|
60
|
-
name_en: "Physician (Gastroenterology)"
|
|
61
|
-
description: "Physician (Gastroenterology)"
|
|
62
|
-
|
|
63
|
-
# Physician (General Surgery)
|
|
64
|
-
- model: endoreg_db.Profession
|
|
65
|
-
fields:
|
|
66
|
-
name: "physician-general-surgery"
|
|
67
|
-
name_de: "Arzt Allgemeinchirurgie"
|
|
68
|
-
name_en: "Physician (General Surgery)"
|
|
69
|
-
description: "Physician (General Surgery)"
|
|
70
|
-
|
|
1
|
+
- model: endoreg_db.Profession
|
|
2
|
+
fields:
|
|
3
|
+
name: "nurse"
|
|
4
|
+
name_de: "Pflegekraft"
|
|
5
|
+
name_en: "Nurse"
|
|
6
|
+
description: "Not further specified nurse"
|
|
7
|
+
|
|
8
|
+
# endoscopy nurse
|
|
9
|
+
- model: endoreg_db.Profession
|
|
10
|
+
fields:
|
|
11
|
+
name: "endoscopy-nurse"
|
|
12
|
+
name_de: "Pflegekraft (Endoskopie)"
|
|
13
|
+
name_en: "Endoscopy nurse"
|
|
14
|
+
description: "Endoscopy nurse"
|
|
15
|
+
|
|
16
|
+
- model: endoreg_db.Profession
|
|
17
|
+
fields:
|
|
18
|
+
name: "physician"
|
|
19
|
+
name_de: "Arzt"
|
|
20
|
+
name_en: "Physician"
|
|
21
|
+
description: "Not further specified doctor"
|
|
22
|
+
|
|
23
|
+
# Physician in training (gastroenterology)
|
|
24
|
+
- model: endoreg_db.Profession
|
|
25
|
+
fields:
|
|
26
|
+
name: "physician-in-training-gastroenterology"
|
|
27
|
+
name_de: "Arzt in Weiterbildung Gastroenterologie"
|
|
28
|
+
name_en: "Physician in training (gastroenterology)"
|
|
29
|
+
description: "Physician in training (gastroenterology)"
|
|
30
|
+
|
|
31
|
+
# Physician in training (internal medicine)
|
|
32
|
+
- model: endoreg_db.Profession
|
|
33
|
+
fields:
|
|
34
|
+
name: "physician-in-training-internal-medicine"
|
|
35
|
+
name_de: "Arzt in Weiterbildung Innere Medizin"
|
|
36
|
+
name_en: "Physician in training (internal medicine)"
|
|
37
|
+
description: "Physician in training (internal medicine)"
|
|
38
|
+
|
|
39
|
+
# Physician in training (general surgery)
|
|
40
|
+
- model: endoreg_db.Profession
|
|
41
|
+
fields:
|
|
42
|
+
name: "physician-in-training-general-surgery"
|
|
43
|
+
name_de: "Arzt in Weiterbildung Allgemeinchirurgie"
|
|
44
|
+
name_en: "Physician in training (general surgery)"
|
|
45
|
+
description: "Physician in training (general surgery)"
|
|
46
|
+
|
|
47
|
+
# Physician (Internal Medicine)
|
|
48
|
+
- model: endoreg_db.Profession
|
|
49
|
+
fields:
|
|
50
|
+
name: "physician-internal-medicine"
|
|
51
|
+
name_de: "Arzt Innere Medizin"
|
|
52
|
+
name_en: "Physician (Internal Medicine)"
|
|
53
|
+
description: "Physician (Internal Medicine)"
|
|
54
|
+
|
|
55
|
+
# Physician (Gastroenterology)
|
|
56
|
+
- model: endoreg_db.Profession
|
|
57
|
+
fields:
|
|
58
|
+
name: "physician-gastroenterology"
|
|
59
|
+
name_de: "Arzt Gastroenterologie"
|
|
60
|
+
name_en: "Physician (Gastroenterology)"
|
|
61
|
+
description: "Physician (Gastroenterology)"
|
|
62
|
+
|
|
63
|
+
# Physician (General Surgery)
|
|
64
|
+
- model: endoreg_db.Profession
|
|
65
|
+
fields:
|
|
66
|
+
name: "physician-general-surgery"
|
|
67
|
+
name_de: "Arzt Allgemeinchirurgie"
|
|
68
|
+
name_en: "Physician (General Surgery)"
|
|
69
|
+
description: "Physician (General Surgery)"
|
|
70
|
+
|
|
@@ -0,0 +1,55 @@
|
|
|
1
|
+
- fields:
|
|
2
|
+
name: reference_balloon_wuerzburg
|
|
3
|
+
product: extraction_balloon_escort_2
|
|
4
|
+
product_group: Balloon
|
|
5
|
+
model: endoreg_db.ReferenceProduct
|
|
6
|
+
- fields:
|
|
7
|
+
name: reference_bougie_wuerzburg
|
|
8
|
+
product: esophageal_dilator
|
|
9
|
+
product_group: Bougie
|
|
10
|
+
model: endoreg_db.ReferenceProduct
|
|
11
|
+
- fields:
|
|
12
|
+
name: reference_wire_wuerzburg
|
|
13
|
+
product: visiglide_2
|
|
14
|
+
product_group: Wire
|
|
15
|
+
model: endoreg_db.ReferenceProduct
|
|
16
|
+
- fields:
|
|
17
|
+
name: reference_peg_wuerzburg
|
|
18
|
+
product: peg_freka_15_ch
|
|
19
|
+
product_group: PEG
|
|
20
|
+
model: endoreg_db.ReferenceProduct
|
|
21
|
+
- fields:
|
|
22
|
+
name: reference_instrument_wuerzburg
|
|
23
|
+
product: biopsy_grasper_hot_radial_jaw_4
|
|
24
|
+
product_group: Instrument
|
|
25
|
+
model: endoreg_db.ReferenceProduct
|
|
26
|
+
- fields:
|
|
27
|
+
name: reference_metalstent_wuerzburg
|
|
28
|
+
product: nitinol_stent_aix_oel
|
|
29
|
+
product_group: Metal-Stent
|
|
30
|
+
model: endoreg_db.ReferenceProduct
|
|
31
|
+
- fields:
|
|
32
|
+
name: reference_plasticstent_wuerzburg
|
|
33
|
+
product: biliary_stent_cotton_leung_sof_flex
|
|
34
|
+
product_group: Plastic-Stent
|
|
35
|
+
model: endoreg_db.ReferenceProduct
|
|
36
|
+
- fields:
|
|
37
|
+
name: reference_plastic_wuerzburg
|
|
38
|
+
product: bite_protector
|
|
39
|
+
product_group: Plastic
|
|
40
|
+
model: endoreg_db.ReferenceProduct
|
|
41
|
+
- fields:
|
|
42
|
+
name: reference_plastic-large_wuerzburg
|
|
43
|
+
product: pressure_syringe_60_ml
|
|
44
|
+
product_group: Plastic-Large
|
|
45
|
+
model: endoreg_db.ReferenceProduct
|
|
46
|
+
- fields:
|
|
47
|
+
name: reference_coat_wuerzburg
|
|
48
|
+
product: foliodress_gown_standard
|
|
49
|
+
product_group: Coat
|
|
50
|
+
model: endoreg_db.ReferenceProduct
|
|
51
|
+
- fields:
|
|
52
|
+
name: reference_absorbant-pad_wuerzburg
|
|
53
|
+
product: absorbant_pad
|
|
54
|
+
product_group: Absorbant-Pad
|
|
55
|
+
model: endoreg_db.ReferenceProduct
|
|
@@ -1,26 +1,26 @@
|
|
|
1
|
-
# yaml definitions for report reader flag objects
|
|
2
|
-
# PATIENT_INFO_LINE_FLAG = "Patient: "
|
|
3
|
-
# ENDOSCOPE_INFO_LINE_FLAG = "Gerät: "
|
|
4
|
-
# EXAMINER_INFO_LINE_FLAG = "1. Unters.:"
|
|
5
|
-
# CUT_OFF_BELOW_LINE_FLAG = "________________"
|
|
6
|
-
|
|
7
|
-
- model: endoreg_db.report_reader_flag
|
|
8
|
-
fields:
|
|
9
|
-
name: "ukw-examination-generic-patient-info-line"
|
|
10
|
-
value: "Patient: "
|
|
11
|
-
|
|
12
|
-
- model: endoreg_db.report_reader_flag
|
|
13
|
-
fields:
|
|
14
|
-
name: "ukw-examination-generic-endoscope-info-line"
|
|
15
|
-
value: "Gerät: "
|
|
16
|
-
|
|
17
|
-
- model: endoreg_db.report_reader_flag
|
|
18
|
-
fields:
|
|
19
|
-
name: "ukw-examination-generic-examiner-info-line"
|
|
20
|
-
value: "1. Unters.:"
|
|
21
|
-
|
|
22
|
-
- model: endoreg_db.report_reader_flag
|
|
23
|
-
fields:
|
|
24
|
-
name: "ukw-examination-generic-cut-off-below-line-01"
|
|
25
|
-
value: "________________"
|
|
26
|
-
|
|
1
|
+
# yaml definitions for report reader flag objects
|
|
2
|
+
# PATIENT_INFO_LINE_FLAG = "Patient: "
|
|
3
|
+
# ENDOSCOPE_INFO_LINE_FLAG = "Gerät: "
|
|
4
|
+
# EXAMINER_INFO_LINE_FLAG = "1. Unters.:"
|
|
5
|
+
# CUT_OFF_BELOW_LINE_FLAG = "________________"
|
|
6
|
+
|
|
7
|
+
- model: endoreg_db.report_reader_flag
|
|
8
|
+
fields:
|
|
9
|
+
name: "ukw-examination-generic-patient-info-line"
|
|
10
|
+
value: "Patient: "
|
|
11
|
+
|
|
12
|
+
- model: endoreg_db.report_reader_flag
|
|
13
|
+
fields:
|
|
14
|
+
name: "ukw-examination-generic-endoscope-info-line"
|
|
15
|
+
value: "Gerät: "
|
|
16
|
+
|
|
17
|
+
- model: endoreg_db.report_reader_flag
|
|
18
|
+
fields:
|
|
19
|
+
name: "ukw-examination-generic-examiner-info-line"
|
|
20
|
+
value: "1. Unters.:"
|
|
21
|
+
|
|
22
|
+
- model: endoreg_db.report_reader_flag
|
|
23
|
+
fields:
|
|
24
|
+
name: "ukw-examination-generic-cut-off-below-line-01"
|
|
25
|
+
value: "________________"
|
|
26
|
+
|
|
@@ -1,19 +1,19 @@
|
|
|
1
|
-
- model: endoreg_db.report_reader_flag
|
|
2
|
-
fields:
|
|
3
|
-
name: "ukw-histology-generic-patient-info-line"
|
|
4
|
-
value: "Patient:"
|
|
5
|
-
|
|
6
|
-
- model: endoreg_db.report_reader_flag
|
|
7
|
-
fields:
|
|
8
|
-
name: "ukw-histology-generic-examiner-info-line"
|
|
9
|
-
value: "Eingang am:"
|
|
10
|
-
|
|
11
|
-
- model: endoreg_db.report_reader_flag
|
|
12
|
-
fields:
|
|
13
|
-
name: "ukw-histology-generic-cut-off-below-line-01"
|
|
14
|
-
value: "$$-3"
|
|
15
|
-
|
|
16
|
-
- model: endoreg_db.report_reader_flag
|
|
17
|
-
fields:
|
|
18
|
-
name: "ukw-histology-generic-endoscope-info-line"
|
|
19
|
-
value: ""
|
|
1
|
+
- model: endoreg_db.report_reader_flag
|
|
2
|
+
fields:
|
|
3
|
+
name: "ukw-histology-generic-patient-info-line"
|
|
4
|
+
value: "Patient:"
|
|
5
|
+
|
|
6
|
+
- model: endoreg_db.report_reader_flag
|
|
7
|
+
fields:
|
|
8
|
+
name: "ukw-histology-generic-examiner-info-line"
|
|
9
|
+
value: "Eingang am:"
|
|
10
|
+
|
|
11
|
+
- model: endoreg_db.report_reader_flag
|
|
12
|
+
fields:
|
|
13
|
+
name: "ukw-histology-generic-cut-off-below-line-01"
|
|
14
|
+
value: "$$-3"
|
|
15
|
+
|
|
16
|
+
- model: endoreg_db.report_reader_flag
|
|
17
|
+
fields:
|
|
18
|
+
name: "ukw-histology-generic-endoscope-info-line"
|
|
19
|
+
value: ""
|
|
@@ -0,0 +1,15 @@
|
|
|
1
|
+
- fields:
|
|
2
|
+
name: gas
|
|
3
|
+
name_de: Erdgas
|
|
4
|
+
name_en: Gas
|
|
5
|
+
model: endoreg_db.Resource
|
|
6
|
+
- fields:
|
|
7
|
+
name: oil
|
|
8
|
+
name_de: "Heizöl"
|
|
9
|
+
name_en: Oil
|
|
10
|
+
model: endoreg_db.Resource
|
|
11
|
+
- fields:
|
|
12
|
+
name: electricity
|
|
13
|
+
name_de: Strom
|
|
14
|
+
name_en: Electricity
|
|
15
|
+
model: endoreg_db.Resource
|
|
File without changes
|
|
File without changes
|