oncoprintjs 5.0.3 → 6.0.1

package/dist/js/oncoprintruleset.d.ts

@@ -1,177 +1,176 @@
-import { ComputedShapeParams, ShapeParams } from "./oncoprintshape";
-import { Omit } from "./utils";
-import { ActiveRules, ColumnProp, Datum, RuleSetId } from "./oncoprintmodel";
-export declare type RuleSetParams = ILinearInterpRuleSetParams | ICategoricalRuleSetParams | IGradientRuleSetParams | IBarRuleSetParams | IStackedBarRuleSetParams | IGradientAndCategoricalRuleSetParams | IGeneticAlterationRuleSetParams;
-interface IGeneralRuleSetParams {
-    type?: RuleSetType;
-    legend_label?: string;
-    legend_base_color?: RGBAColor;
-    exclude_from_legend?: boolean;
-    na_z?: number;
-    na_legend_label?: string;
-    na_shapes?: ShapeParams[];
-}
-interface ILinearInterpRuleSetParams extends IGeneralRuleSetParams {
-    log_scale?: boolean;
-    value_key: string;
-    value_range: [number, number];
-}
-export interface ICategoricalRuleSetParams extends IGeneralRuleSetParams {
-    type: RuleSetType.CATEGORICAL;
-    category_key: string;
-    category_to_color?: {
-        [category: string]: RGBAColor;
-    };
-    universal_rule_categories?: {
-        [category: string]: any;
-    };
-}
-export interface IGradientRuleSetParams extends ILinearInterpRuleSetParams {
-    type: RuleSetType.GRADIENT;
-    colors?: RGBAColor[];
-    colormap_name?: string;
-    value_stop_points: number[];
-    null_color?: RGBAColor;
-    null_legend_label?: string;
-}
-export interface IGradientAndCategoricalRuleSetParams extends IGeneralRuleSetParams {
-    type: RuleSetType.GRADIENT_AND_CATEGORICAL;
-    colors?: RGBAColor[];
-    colormap_name?: string;
-    value_stop_points: number[];
-    null_color?: RGBAColor;
-    log_scale?: boolean;
-    value_key: string;
-    value_range: [number, number];
-    category_key: string;
-    category_to_color?: {
-        [category: string]: RGBAColor;
-    };
-}
-export interface IBarRuleSetParams extends ILinearInterpRuleSetParams {
-    type: RuleSetType.BAR;
-    fill?: RGBAColor;
-    negative_fill?: RGBAColor;
-}
-export interface IStackedBarRuleSetParams extends IGeneralRuleSetParams {
-    type: RuleSetType.STACKED_BAR;
-    value_key: string;
-    categories: string[];
-    fills?: RGBAColor[];
-}
-export interface IGeneticAlterationRuleSetParams extends IGeneralRuleSetParams {
-    type: RuleSetType.GENE;
-    rule_params: GeneticAlterationRuleParams;
-}
-declare type GeneticAlterationSingleRuleParams = {
-    shapes: ShapeParams[];
-    legend_label: string;
-    exclude_from_legend?: boolean;
-    legend_order?: number;
-};
-export declare type GeneticAlterationRuleParams = {
-    always?: GeneticAlterationSingleRuleParams;
-    conditional: {
-        [datumKey: string]: {
-            [commaSeparatedDatumValues: string]: GeneticAlterationSingleRuleParams;
-        };
-    };
-};
-export declare type RGBAColor = [number, number, number, number];
-declare type RuleParams = {
-    shapes: ShapeParams[];
-    legend_label?: string;
-    exclude_from_legend?: boolean;
-    legend_config?: RuleLegendConfig;
-    legend_order?: number;
-    legend_base_color?: RGBAColor;
-};
-declare type RuleLegendConfig = {
-    type: "rule";
-    target: any;
-} | {
-    type: "number";
-    range: [number, number];
-    range_type: LinearInterpRangeType;
-    positive_color: RGBAColor;
-    negative_color: RGBAColor;
-    interpFn: (val: number) => number;
-} | // range: [lower, upper]
-{
-    type: "gradient";
-    range: [number, number];
-    colorFn: (val: number) => RGBAColor;
-};
-export declare enum RuleSetType {
-    CATEGORICAL = "categorical",
-    GRADIENT = "gradient",
-    GRADIENT_AND_CATEGORICAL = "gradient+categorical",
-    BAR = "bar",
-    STACKED_BAR = "stacked_bar",
-    GENE = "gene"
-}
-export declare type RuleId = number;
-export declare type RuleWithId = {
-    id: RuleId;
-    rule: Rule;
-};
-export declare class RuleSet {
-    static getRuleSetId: () => number;
-    static getRuleId: () => number;
-    rule_set_id: RuleSetId;
-    legend_label?: string;
-    protected legend_base_color?: RGBAColor;
-    exclude_from_legend?: boolean;
-    protected active_rule_ids: ActiveRules;
-    protected rules_with_id: RuleWithId[];
-    protected universal_rule?: RuleWithId;
-    constructor(params: Omit<RuleSetParams, "type">);
-    getLegendLabel(): string;
-    getRuleSetId(): number;
-    addRules(list_of_params: RuleParams[]): number[];
-    _addRule(params: RuleParams, rule_id?: RuleId): number;
-    setUniversalRule(r: RuleWithId): void;
-    removeRule(rule_id: RuleId): void;
-    getRuleWithId(rule_id: RuleId): RuleWithId;
-    isExcludedFromLegend(): boolean;
-    getRule(rule_id: RuleId): Rule;
-    getRecentlyUsedRules(): Rule[];
-    applyRulesToDatum(rules_with_id: RuleWithId[], datum: Datum, cell_width: number, cell_height: number): ComputedShapeParams[];
-    getSpecificRulesForDatum(datum?: Datum): RuleWithId[];
-    getUniversalRule(): RuleWithId;
-    getUniversalShapes(cell_width: number, cell_height: number): ComputedShapeParams[];
-    getSpecificShapesForDatum(data: Datum[], cell_width: number, cell_height: number, out_active_rules?: ActiveRules | undefined, data_id_key?: string & keyof Datum, important_ids?: ColumnProp<boolean>): ComputedShapeParams[][];
-}
-declare class LookupRuleSet extends RuleSet {
-    private lookup_map_by_key_and_value;
-    private lookup_map_by_key;
-    private rule_id_to_conditions;
-    getSpecificRulesForDatum(datum?: Datum): RuleWithId[];
-    private indexRuleForLookup;
-    addRule(condition_key: string, condition_value: any, params: RuleParams): number;
-    linkExistingRule(condition_key: string, condition_value: string, existing_rule_id: RuleId): void;
-    removeRule(rule_id: RuleId): void;
-}
-export declare enum LinearInterpRangeType {
-    ALL = "ALL",
-    NON_NEGATIVE = "NON_NEGATIVE",
-    NON_POSITIVE = "NON_POSITIVE"
-}
-export declare class GeneticAlterationRuleSet extends LookupRuleSet {
-    constructor(params: IGeneticAlterationRuleSetParams);
-    private addRulesFromParams;
-}
-export declare class Rule {
-    private shapes;
-    legend_label: string;
-    legend_base_color?: RGBAColor;
-    exclude_from_legend?: boolean;
-    private legend_config?;
-    legend_order?: number;
-    constructor(params: RuleParams);
-    getLegendConfig(): RuleLegendConfig;
-    apply(d: Datum, cell_width: number, cell_height: number): ComputedShapeParams[];
-    isExcludedFromLegend(): boolean;
-}
-export default function (params: RuleSetParams): RuleSet;
-export {};
+import { ComputedShapeParams, ShapeParams } from './oncoprintshape';
+import { Omit } from './utils';
+import { ActiveRules, ColumnProp, Datum, RuleSetId } from './oncoprintmodel';
+export declare type RuleSetParams = ILinearInterpRuleSetParams | ICategoricalRuleSetParams | IGradientRuleSetParams | IBarRuleSetParams | IStackedBarRuleSetParams | IGradientAndCategoricalRuleSetParams | IGeneticAlterationRuleSetParams;
+interface IGeneralRuleSetParams {
+    type?: RuleSetType;
+    legend_label?: string;
+    legend_base_color?: RGBAColor;
+    exclude_from_legend?: boolean;
+    na_z?: number;
+    na_legend_label?: string;
+    na_shapes?: ShapeParams[];
+}
+interface ILinearInterpRuleSetParams extends IGeneralRuleSetParams {
+    log_scale?: boolean;
+    value_key: string;
+    value_range: [number, number];
+}
+export interface ICategoricalRuleSetParams extends IGeneralRuleSetParams {
+    type: RuleSetType.CATEGORICAL;
+    category_key: string;
+    category_to_color?: {
+        [category: string]: RGBAColor;
+    };
+    universal_rule_categories?: {
+        [category: string]: any;
+    };
+}
+export interface IGradientRuleSetParams extends ILinearInterpRuleSetParams {
+    type: RuleSetType.GRADIENT;
+    colors?: RGBAColor[];
+    colormap_name?: string;
+    value_stop_points: number[];
+    null_color?: RGBAColor;
+    null_legend_label?: string;
+}
+export interface IGradientAndCategoricalRuleSetParams extends IGeneralRuleSetParams {
+    type: RuleSetType.GRADIENT_AND_CATEGORICAL;
+    colors?: RGBAColor[];
+    colormap_name?: string;
+    value_stop_points: number[];
+    null_color?: RGBAColor;
+    log_scale?: boolean;
+    value_key: string;
+    value_range: [number, number];
+    category_key: string;
+    category_to_color?: {
+        [category: string]: RGBAColor;
+    };
+}
+export interface IBarRuleSetParams extends ILinearInterpRuleSetParams {
+    type: RuleSetType.BAR;
+    fill?: RGBAColor;
+    negative_fill?: RGBAColor;
+}
+export interface IStackedBarRuleSetParams extends IGeneralRuleSetParams {
+    type: RuleSetType.STACKED_BAR;
+    value_key: string;
+    categories: string[];
+    fills?: RGBAColor[];
+}
+export interface IGeneticAlterationRuleSetParams extends IGeneralRuleSetParams {
+    type: RuleSetType.GENE;
+    rule_params: GeneticAlterationRuleParams;
+}
+declare type GeneticAlterationSingleRuleParams = {
+    shapes: ShapeParams[];
+    legend_label: string;
+    exclude_from_legend?: boolean;
+    legend_order?: number;
+};
+export declare type GeneticAlterationRuleParams = {
+    always?: GeneticAlterationSingleRuleParams;
+    conditional: {
+        [datumKey: string]: {
+            [commaSeparatedDatumValues: string]: GeneticAlterationSingleRuleParams;
+        };
+    };
+};
+export declare type RGBAColor = [number, number, number, number];
+declare type RuleParams = {
+    shapes: ShapeParams[];
+    legend_label?: string;
+    exclude_from_legend?: boolean;
+    legend_config?: RuleLegendConfig;
+    legend_order?: number;
+    legend_base_color?: RGBAColor;
+};
+declare type RuleLegendConfig = {
+    type: 'rule';
+    target: any;
+} | {
+    type: 'number';
+    range: [number, number];
+    range_type: LinearInterpRangeType;
+    positive_color: RGBAColor;
+    negative_color: RGBAColor;
+    interpFn: (val: number) => number;
+} | {
+    type: 'gradient';
+    range: [number, number];
+    colorFn: (val: number) => RGBAColor;
+};
+export declare enum RuleSetType {
+    CATEGORICAL = "categorical",
+    GRADIENT = "gradient",
+    GRADIENT_AND_CATEGORICAL = "gradient+categorical",
+    BAR = "bar",
+    STACKED_BAR = "stacked_bar",
+    GENE = "gene"
+}
+export declare type RuleId = number;
+export declare type RuleWithId = {
+    id: RuleId;
+    rule: Rule;
+};
+export declare class RuleSet {
+    static getRuleSetId: () => number;
+    static getRuleId: () => number;
+    rule_set_id: RuleSetId;
+    legend_label?: string;
+    protected legend_base_color?: RGBAColor;
+    exclude_from_legend?: boolean;
+    protected active_rule_ids: ActiveRules;
+    protected rules_with_id: RuleWithId[];
+    protected universal_rule?: RuleWithId;
+    constructor(params: Omit<RuleSetParams, 'type'>);
+    getLegendLabel(): string;
+    getRuleSetId(): number;
+    addRules(list_of_params: RuleParams[]): number[];
+    _addRule(params: RuleParams, rule_id?: RuleId): number;
+    setUniversalRule(r: RuleWithId): void;
+    removeRule(rule_id: RuleId): void;
+    getRuleWithId(rule_id: RuleId): RuleWithId;
+    isExcludedFromLegend(): boolean;
+    getRule(rule_id: RuleId): Rule;
+    getRecentlyUsedRules(): Rule[];
+    applyRulesToDatum(rules_with_id: RuleWithId[], datum: Datum, cell_width: number, cell_height: number): ComputedShapeParams[];
+    getSpecificRulesForDatum(datum?: Datum): RuleWithId[];
+    getUniversalRule(): RuleWithId;
+    getUniversalShapes(cell_width: number, cell_height: number): ComputedShapeParams[];
+    getSpecificShapesForDatum(data: Datum[], cell_width: number, cell_height: number, out_active_rules?: ActiveRules | undefined, data_id_key?: string & keyof Datum, important_ids?: ColumnProp<boolean>): ComputedShapeParams[][];
+}
+declare class LookupRuleSet extends RuleSet {
+    private lookup_map_by_key_and_value;
+    private lookup_map_by_key;
+    private rule_id_to_conditions;
+    getSpecificRulesForDatum(datum?: Datum): RuleWithId[];
+    private indexRuleForLookup;
+    addRule(condition_key: string, condition_value: any, params: RuleParams): number;
+    linkExistingRule(condition_key: string, condition_value: string, existing_rule_id: RuleId): void;
+    removeRule(rule_id: RuleId): void;
+}
+export declare enum LinearInterpRangeType {
+    ALL = "ALL",
+    NON_NEGATIVE = "NON_NEGATIVE",
+    NON_POSITIVE = "NON_POSITIVE"
+}
+export declare class GeneticAlterationRuleSet extends LookupRuleSet {
+    constructor(params: IGeneticAlterationRuleSetParams);
+    private addRulesFromParams;
+}
+export declare class Rule {
+    private shapes;
+    legend_label: string;
+    legend_base_color?: RGBAColor;
+    exclude_from_legend?: boolean;
+    private legend_config?;
+    legend_order?: number;
+    constructor(params: RuleParams);
+    getLegendConfig(): RuleLegendConfig;
+    apply(d: Datum, cell_width: number, cell_height: number): ComputedShapeParams[];
+    isExcludedFromLegend(): boolean;
+}
+export default function (params: RuleSetParams): RuleSet;
+export {};

package/dist/js/oncoprintshape.d.ts

@@ -1,67 +1,67 @@
-import { Datum } from "./oncoprintmodel";
-import { RGBAColor } from "./oncoprintruleset";
-declare type StringParameter = "type";
-declare type PercentNumberParameter = "width" | "height" | "x" | "y" | "x1" | "x2" | "x3" | "y1" | "y2" | "y3";
-declare type PlainNumberParameter = "z" | "stroke-width" | "stroke-opacity";
-declare type RGBAParameter = "stroke" | "fill";
-declare type NumberParameter = PercentNumberParameter | PlainNumberParameter;
-declare type Parameter = StringParameter | NumberParameter | RGBAParameter;
-declare type StringParamFunction = (d: Datum) => string;
-declare type NumberParamFunction = (d: Datum) => number;
-declare type RGBAParamFunction = (d: Datum) => RGBAColor;
-export declare type ShapeParams = {
-    [x in StringParameter]?: string | StringParamFunction;
-} & {
-    [x in NumberParameter]?: number | NumberParamFunction;
-} & {
-    [x in RGBAParameter]?: RGBAColor | RGBAParamFunction;
-};
-export declare type ComputedShapeParams = {
-    [x in StringParameter]?: string;
-} & {
-    [x in NumberParameter]?: number;
-} & {
-    [x in RGBAParameter]?: RGBAColor;
-};
-export declare class Shape {
-    private params;
-    private static cache;
-    private params_with_type;
-    private onlyDependsOnWidthAndHeight;
-    private instanceCache;
-    constructor(params: ShapeParams);
-    static hashComputedShape(computed_params: ComputedShapeParams, z_index?: number | string): string;
-    private static getCachedShape;
-    getRequiredParameters(): Parameter[];
-    completeWithDefaults(): void;
-    markParameterTypes(): void;
-    getComputedParams(d: Datum, base_width: number, base_height: number): ComputedShapeParams;
-}
-declare type SpecificComputedShapeParams<ShapeParamType> = {
-    [x in ShapeParamType & StringParameter]: string;
-} & {
-    [x in ShapeParamType & NumberParameter]: number;
-} & {
-    [x in ShapeParamType & RGBAParameter]: RGBAColor;
-};
-declare type RectangleParameter = "width" | "height" | "x" | "y" | "z" | "stroke" | "stroke-width" | "fill";
-export declare type ComputedRectangleParams = SpecificComputedShapeParams<RectangleParameter>;
-export declare class Rectangle extends Shape {
-    getRequiredParameters(): RectangleParameter[];
-}
-declare type TriangleParameter = "x1" | "x2" | "x3" | "y1" | "y2" | "y3" | "z" | "stroke" | "stroke-width" | "fill";
-export declare type ComputedTriangleParams = SpecificComputedShapeParams<TriangleParameter>;
-export declare class Triangle extends Shape {
-    getRequiredParameters(): TriangleParameter[];
-}
-export declare type EllipseParameter = "width" | "height" | "x" | "y" | "z" | "stroke" | "stroke-width" | "fill";
-export declare type ComputedEllipseParams = SpecificComputedShapeParams<EllipseParameter>;
-export declare class Ellipse extends Shape {
-    getRequiredParameters(): EllipseParameter[];
-}
-export declare type LineParameter = "x1" | "y1" | "x2" | "y2" | "z" | "stroke" | "stroke-width";
-export declare type ComputedLineParams = SpecificComputedShapeParams<LineParameter>;
-export declare class Line extends Shape {
-    getRequiredParameters(): LineParameter[];
-}
-export {};
+import { Datum } from './oncoprintmodel';
+import { RGBAColor } from './oncoprintruleset';
+declare type StringParameter = 'type';
+declare type PercentNumberParameter = 'width' | 'height' | 'x' | 'y' | 'x1' | 'x2' | 'x3' | 'y1' | 'y2' | 'y3';
+declare type PlainNumberParameter = 'z' | 'stroke-width' | 'stroke-opacity';
+declare type RGBAParameter = 'stroke' | 'fill';
+declare type NumberParameter = PercentNumberParameter | PlainNumberParameter;
+declare type Parameter = StringParameter | NumberParameter | RGBAParameter;
+declare type StringParamFunction = (d: Datum) => string;
+declare type NumberParamFunction = (d: Datum) => number;
+declare type RGBAParamFunction = (d: Datum) => RGBAColor;
+export declare type ShapeParams = {
+    [x in StringParameter]?: string | StringParamFunction;
+} & {
+    [x in NumberParameter]?: number | NumberParamFunction;
+} & {
+    [x in RGBAParameter]?: RGBAColor | RGBAParamFunction;
+};
+export declare type ComputedShapeParams = {
+    [x in StringParameter]?: string;
+} & {
+    [x in NumberParameter]?: number;
+} & {
+    [x in RGBAParameter]?: RGBAColor;
+};
+export declare class Shape {
+    private params;
+    private static cache;
+    private params_with_type;
+    private onlyDependsOnWidthAndHeight;
+    private instanceCache;
+    constructor(params: ShapeParams);
+    static hashComputedShape(computed_params: ComputedShapeParams, z_index?: number | string): string;
+    private static getCachedShape;
+    getRequiredParameters(): Parameter[];
+    completeWithDefaults(): void;
+    markParameterTypes(): void;
+    getComputedParams(d: Datum, base_width: number, base_height: number): ComputedShapeParams;
+}
+declare type SpecificComputedShapeParams<ShapeParamType> = {
+    [x in ShapeParamType & StringParameter]: string;
+} & {
+    [x in ShapeParamType & NumberParameter]: number;
+} & {
+    [x in ShapeParamType & RGBAParameter]: RGBAColor;
+};
+declare type RectangleParameter = 'width' | 'height' | 'x' | 'y' | 'z' | 'stroke' | 'stroke-width' | 'fill';
+export declare type ComputedRectangleParams = SpecificComputedShapeParams<RectangleParameter>;
+export declare class Rectangle extends Shape {
+    getRequiredParameters(): RectangleParameter[];
+}
+declare type TriangleParameter = 'x1' | 'x2' | 'x3' | 'y1' | 'y2' | 'y3' | 'z' | 'stroke' | 'stroke-width' | 'fill';
+export declare type ComputedTriangleParams = SpecificComputedShapeParams<TriangleParameter>;
+export declare class Triangle extends Shape {
+    getRequiredParameters(): TriangleParameter[];
+}
+export declare type EllipseParameter = 'width' | 'height' | 'x' | 'y' | 'z' | 'stroke' | 'stroke-width' | 'fill';
+export declare type ComputedEllipseParams = SpecificComputedShapeParams<EllipseParameter>;
+export declare class Ellipse extends Shape {
+    getRequiredParameters(): EllipseParameter[];
+}
+export declare type LineParameter = 'x1' | 'y1' | 'x2' | 'y2' | 'z' | 'stroke' | 'stroke-width';
+export declare type ComputedLineParams = SpecificComputedShapeParams<LineParameter>;
+export declare class Line extends Shape {
+    getRequiredParameters(): LineParameter[];
+}
+export {};

package/dist/js/oncoprintshapetosvg.d.ts

@@ -1,2 +1,2 @@
-import { ComputedShapeParams } from "./oncoprintshape";
-export default function shapeToSVG(oncoprint_shape_computed_params: ComputedShapeParams, offset_x: number, offset_y: number): SVGElement;
+import { ComputedShapeParams } from './oncoprintshape';
+export default function shapeToSVG(oncoprint_shape_computed_params: ComputedShapeParams, offset_x: number, offset_y: number): SVGElement;

package/dist/js/oncoprintshapetovertexes.d.ts

@@ -1,5 +1,5 @@
-import { ComputedShapeParams } from "./oncoprintshape";
-declare type AddVertexCallback = (vertex: [number, number, number], color: [number, number, number, number]) => void;
-export default function (oncoprint_shape_computed_params: ComputedShapeParams, z_index: number, addVertex: AddVertexCallback): void;
-export declare function getNumWebGLVertexes(shape: ComputedShapeParams): number;
-export {};
+import { ComputedShapeParams } from './oncoprintshape';
+declare type AddVertexCallback = (vertex: [number, number, number], color: [number, number, number, number]) => void;
+export default function (oncoprint_shape_computed_params: ComputedShapeParams, z_index: number, addVertex: AddVertexCallback): void;
+export declare function getNumWebGLVertexes(shape: ComputedShapeParams): number;
+export {};

package/dist/js/oncoprinttooltip.d.ts

@@ -1,22 +1,23 @@
-/// <reference types="jquery" />
-export declare type OncoprintTooltipParams = {
-    noselect?: boolean;
-};
-export default class OncoprintToolTip {
-    private $container;
-    private $div;
-    private hide_timeout_id;
-    private show_timeout_id;
-    center: boolean;
-    private shown;
-    constructor($container: JQuery, params?: OncoprintTooltipParams);
-    show(wait: number | undefined, viewport_x: number, viewport_y: number, $contents: JQuery, fade?: boolean): void;
-    private doShow;
-    private doHide;
-    private cancelScheduledShow;
-    private cancelScheduledHide;
-    showIfNotAlreadyGoingTo(wait: number | undefined, viewport_x: number, viewport_y: number, $contents: JQuery): void;
-    hideIfNotAlreadyGoingTo(wait?: number): void;
-    hide(wait?: number): void;
-    fadeIn(wait: number | undefined, viewport_x: number, viewport_y: number, $contents: JQuery): void;
-}
+/// <reference types="jquery" />
+/// <reference types="jstree" />
+export declare type OncoprintTooltipParams = {
+    noselect?: boolean;
+};
+export default class OncoprintToolTip {
+    private $container;
+    private $div;
+    private hide_timeout_id;
+    private show_timeout_id;
+    center: boolean;
+    private shown;
+    constructor($container: JQuery, params?: OncoprintTooltipParams);
+    show(wait: number | undefined, viewport_x: number, viewport_y: number, $contents: JQuery, fade?: boolean): void;
+    private doShow;
+    private doHide;
+    private cancelScheduledShow;
+    private cancelScheduledHide;
+    showIfNotAlreadyGoingTo(wait: number | undefined, viewport_x: number, viewport_y: number, $contents: JQuery): void;
+    hideIfNotAlreadyGoingTo(wait?: number): void;
+    hide(wait?: number): void;
+    fadeIn(wait: number | undefined, viewport_x: number, viewport_y: number, $contents: JQuery): void;
+}

package/dist/js/oncoprinttrackinfoview.d.ts

@@ -1,39 +1,40 @@
-/// <reference types="jquery" />
-import OncoprintToolTip from "./oncoprinttooltip";
-import OncoprintModel from "./oncoprintmodel";
-export default class OncoprintTrackInfoView {
-    private $div;
-    private tooltip;
-    private $ctr;
-    private $text_ctr;
-    private base_font_size;
-    private font_family;
-    private font_weight;
-    private width;
-    private $label_elts;
-    private rendering_suppressed;
-    private minimum_track_height;
-    constructor($div: JQuery, tooltip: OncoprintToolTip);
-    private destroyLabelElts;
-    private renderAllInfo;
-    private scroll;
-    private resize;
-    getFontSize(): number;
-    getWidth(): number;
-    addTracks(model: OncoprintModel, getCellViewHeight: () => number): void;
-    moveTrack(model: OncoprintModel, getCellViewHeight: () => number): void;
-    setTrackGroupOrder(model: OncoprintModel, getCellViewHeight: () => number): void;
-    removeTrack(model: OncoprintModel, getCellViewHeight: () => number): void;
-    setTrackInfo(model: OncoprintModel, getCellViewHeight: () => number): void;
-    setTrackGroupHeader(model: OncoprintModel, getCellViewHeight: () => number): void;
-    setScroll(model: OncoprintModel): void;
-    setHorzScroll(model: OncoprintModel): void;
-    setVertScroll(model: OncoprintModel): void;
-    setZoom(model: OncoprintModel, getCellViewHeight: () => number): void;
-    setViewport(model: OncoprintModel, getCellViewHeight: () => number): void;
-    setVertZoom(model: OncoprintModel, getCellViewHeight: () => number): void;
-    suppressRendering(): void;
-    releaseRendering(model: OncoprintModel, getCellViewHeight: () => number): void;
-    destroy(): void;
-    toSVGGroup(model: OncoprintModel, offset_x: number, offset_y: number): SVGGElement;
-}
+/// <reference types="jquery" />
+/// <reference types="jstree" />
+import OncoprintToolTip from './oncoprinttooltip';
+import OncoprintModel from './oncoprintmodel';
+export default class OncoprintTrackInfoView {
+    private $div;
+    private tooltip;
+    private $ctr;
+    private $text_ctr;
+    private base_font_size;
+    private font_family;
+    private font_weight;
+    private width;
+    private $label_elts;
+    private rendering_suppressed;
+    private minimum_track_height;
+    constructor($div: JQuery, tooltip: OncoprintToolTip);
+    private destroyLabelElts;
+    private renderAllInfo;
+    private scroll;
+    private resize;
+    getFontSize(): number;
+    getWidth(): number;
+    addTracks(model: OncoprintModel, getCellViewHeight: () => number): void;
+    moveTrack(model: OncoprintModel, getCellViewHeight: () => number): void;
+    setTrackGroupOrder(model: OncoprintModel, getCellViewHeight: () => number): void;
+    removeTrack(model: OncoprintModel, getCellViewHeight: () => number): void;
+    setTrackInfo(model: OncoprintModel, getCellViewHeight: () => number): void;
+    setTrackGroupHeader(model: OncoprintModel, getCellViewHeight: () => number): void;
+    setScroll(model: OncoprintModel): void;
+    setHorzScroll(model: OncoprintModel): void;
+    setVertScroll(model: OncoprintModel): void;
+    setZoom(model: OncoprintModel, getCellViewHeight: () => number): void;
+    setViewport(model: OncoprintModel, getCellViewHeight: () => number): void;
+    setVertZoom(model: OncoprintModel, getCellViewHeight: () => number): void;
+    suppressRendering(): void;
+    releaseRendering(model: OncoprintModel, getCellViewHeight: () => number): void;
+    destroy(): void;
+    toSVGGroup(model: OncoprintModel, offset_x: number, offset_y: number): SVGGElement;
+}