okstra 0.108.0 → 0.110.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (648) hide show
  1. package/README.kr.md +1 -1
  2. package/README.md +1 -1
  3. package/docs/kr/architecture.md +3 -3
  4. package/docs/kr/cli.md +2 -2
  5. package/docs/project-structure-overview.md +3 -3
  6. package/package.json +1 -1
  7. package/runtime/BUILD.json +2 -2
  8. package/runtime/prompts/profiles/_common-contract.md +1 -1
  9. package/runtime/python/okstra_ctl/graphify_cmd.py +225 -0
  10. package/runtime/python/okstra_ctl/resolve_task_key.py +15 -9
  11. package/runtime/python/okstra_ctl/worktree.py +14 -13
  12. package/runtime/python/okstra_project/__init__.py +2 -0
  13. package/runtime/python/okstra_project/state.py +36 -0
  14. package/runtime/python/okstra_vendor/__init__.py +41 -0
  15. package/runtime/python/okstra_vendor/graphify/.vendored-version +1 -0
  16. package/runtime/python/okstra_vendor/graphify/__init__.py +28 -0
  17. package/runtime/python/okstra_vendor/graphify/__main__.py +1371 -0
  18. package/runtime/python/okstra_vendor/graphify/analyze.py +540 -0
  19. package/runtime/python/okstra_vendor/graphify/benchmark.py +129 -0
  20. package/runtime/python/okstra_vendor/graphify/build.py +107 -0
  21. package/runtime/python/okstra_vendor/graphify/cache.py +169 -0
  22. package/runtime/python/okstra_vendor/graphify/cluster.py +137 -0
  23. package/runtime/python/okstra_vendor/graphify/detect.py +510 -0
  24. package/runtime/python/okstra_vendor/graphify/export.py +1014 -0
  25. package/runtime/python/okstra_vendor/graphify/extract.py +3277 -0
  26. package/runtime/python/okstra_vendor/graphify/hooks.py +220 -0
  27. package/runtime/python/okstra_vendor/graphify/ingest.py +297 -0
  28. package/runtime/python/okstra_vendor/graphify/manifest.py +4 -0
  29. package/runtime/python/okstra_vendor/graphify/report.py +175 -0
  30. package/runtime/python/okstra_vendor/graphify/security.py +203 -0
  31. package/runtime/python/okstra_vendor/graphify/serve.py +373 -0
  32. package/runtime/python/okstra_vendor/graphify/skill-aider.md +1184 -0
  33. package/runtime/python/okstra_vendor/graphify/skill-claw.md +1184 -0
  34. package/runtime/python/okstra_vendor/graphify/skill-codex.md +1242 -0
  35. package/runtime/python/okstra_vendor/graphify/skill-copilot.md +1268 -0
  36. package/runtime/python/okstra_vendor/graphify/skill-droid.md +1239 -0
  37. package/runtime/python/okstra_vendor/graphify/skill-kiro.md +1183 -0
  38. package/runtime/python/okstra_vendor/graphify/skill-opencode.md +1238 -0
  39. package/runtime/python/okstra_vendor/graphify/skill-trae.md +1208 -0
  40. package/runtime/python/okstra_vendor/graphify/skill-vscode.md +253 -0
  41. package/runtime/python/okstra_vendor/graphify/skill-windows.md +1245 -0
  42. package/runtime/python/okstra_vendor/graphify/skill.md +1319 -0
  43. package/runtime/python/okstra_vendor/graphify/transcribe.py +182 -0
  44. package/runtime/python/okstra_vendor/graphify/validate.py +72 -0
  45. package/runtime/python/okstra_vendor/graphify/watch.py +188 -0
  46. package/runtime/python/okstra_vendor/graphify/wiki.py +214 -0
  47. package/runtime/python/okstra_vendor/networkx/__init__.py +62 -0
  48. package/runtime/python/okstra_vendor/networkx/algorithms/__init__.py +134 -0
  49. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/__init__.py +26 -0
  50. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/clique.py +259 -0
  51. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/clustering_coefficient.py +71 -0
  52. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/connectivity.py +412 -0
  53. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/density.py +396 -0
  54. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/distance_measures.py +150 -0
  55. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/dominating_set.py +149 -0
  56. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/kcomponents.py +369 -0
  57. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/matching.py +44 -0
  58. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/maxcut.py +143 -0
  59. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/ramsey.py +53 -0
  60. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/steinertree.py +265 -0
  61. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/__init__.py +0 -0
  62. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_approx_clust_coeff.py +41 -0
  63. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_clique.py +112 -0
  64. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_connectivity.py +199 -0
  65. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_density.py +146 -0
  66. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_distance_measures.py +59 -0
  67. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_dominating_set.py +78 -0
  68. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_kcomponents.py +303 -0
  69. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_matching.py +8 -0
  70. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_maxcut.py +94 -0
  71. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_ramsey.py +31 -0
  72. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_steinertree.py +306 -0
  73. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_traveling_salesman.py +1014 -0
  74. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_treewidth.py +274 -0
  75. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_vertex_cover.py +68 -0
  76. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/traveling_salesman.py +1508 -0
  77. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/treewidth.py +255 -0
  78. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/vertex_cover.py +83 -0
  79. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/__init__.py +5 -0
  80. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/connectivity.py +122 -0
  81. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/correlation.py +302 -0
  82. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/mixing.py +255 -0
  83. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/neighbor_degree.py +160 -0
  84. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/pairs.py +127 -0
  85. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/__init__.py +0 -0
  86. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/base_test.py +81 -0
  87. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_connectivity.py +143 -0
  88. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_correlation.py +122 -0
  89. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_mixing.py +174 -0
  90. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_neighbor_degree.py +107 -0
  91. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_pairs.py +87 -0
  92. package/runtime/python/okstra_vendor/networkx/algorithms/asteroidal.py +164 -0
  93. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/__init__.py +88 -0
  94. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/basic.py +322 -0
  95. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/centrality.py +290 -0
  96. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/cluster.py +289 -0
  97. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/covering.py +57 -0
  98. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/edgelist.py +360 -0
  99. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/extendability.py +105 -0
  100. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/generators.py +603 -0
  101. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/link_analysis.py +316 -0
  102. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/matching.py +590 -0
  103. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/matrix.py +232 -0
  104. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/projection.py +526 -0
  105. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/redundancy.py +112 -0
  106. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/spectral.py +69 -0
  107. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/__init__.py +0 -0
  108. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_basic.py +125 -0
  109. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_centrality.py +192 -0
  110. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_cluster.py +84 -0
  111. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_covering.py +33 -0
  112. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_edgelist.py +240 -0
  113. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_extendability.py +334 -0
  114. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_generators.py +407 -0
  115. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_link_analysis.py +218 -0
  116. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matching.py +327 -0
  117. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matrix.py +138 -0
  118. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_project.py +409 -0
  119. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_redundancy.py +35 -0
  120. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_spectral_bipartivity.py +80 -0
  121. package/runtime/python/okstra_vendor/networkx/algorithms/boundary.py +168 -0
  122. package/runtime/python/okstra_vendor/networkx/algorithms/bridges.py +205 -0
  123. package/runtime/python/okstra_vendor/networkx/algorithms/broadcasting.py +164 -0
  124. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/__init__.py +20 -0
  125. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/betweenness.py +591 -0
  126. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/betweenness_subset.py +236 -0
  127. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/closeness.py +282 -0
  128. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_betweenness.py +364 -0
  129. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_betweenness_subset.py +227 -0
  130. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_closeness.py +96 -0
  131. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/degree_alg.py +150 -0
  132. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/dispersion.py +107 -0
  133. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/eigenvector.py +357 -0
  134. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/flow_matrix.py +130 -0
  135. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/group.py +787 -0
  136. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/harmonic.py +88 -0
  137. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/katz.py +331 -0
  138. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/laplacian.py +150 -0
  139. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/load.py +200 -0
  140. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/percolation.py +128 -0
  141. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/reaching.py +209 -0
  142. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/second_order.py +141 -0
  143. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/subgraph_alg.py +361 -0
  144. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/__init__.py +0 -0
  145. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality.py +923 -0
  146. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality_subset.py +354 -0
  147. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_closeness_centrality.py +274 -0
  148. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality.py +259 -0
  149. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality_subset.py +147 -0
  150. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_closeness.py +43 -0
  151. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_degree_centrality.py +144 -0
  152. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_dispersion.py +73 -0
  153. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_eigenvector_centrality.py +186 -0
  154. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_group.py +277 -0
  155. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_harmonic_centrality.py +122 -0
  156. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_katz_centrality.py +345 -0
  157. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_laplacian_centrality.py +220 -0
  158. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_load_centrality.py +344 -0
  159. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_percolation_centrality.py +87 -0
  160. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_reaching.py +140 -0
  161. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_second_order_centrality.py +82 -0
  162. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_subgraph.py +110 -0
  163. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_trophic.py +302 -0
  164. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_voterank.py +64 -0
  165. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/trophic.py +181 -0
  166. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/voterank_alg.py +95 -0
  167. package/runtime/python/okstra_vendor/networkx/algorithms/chains.py +172 -0
  168. package/runtime/python/okstra_vendor/networkx/algorithms/chordal.py +443 -0
  169. package/runtime/python/okstra_vendor/networkx/algorithms/clique.py +818 -0
  170. package/runtime/python/okstra_vendor/networkx/algorithms/cluster.py +732 -0
  171. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/__init__.py +4 -0
  172. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/equitable_coloring.py +505 -0
  173. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/greedy_coloring.py +565 -0
  174. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/__init__.py +0 -0
  175. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/test_coloring.py +863 -0
  176. package/runtime/python/okstra_vendor/networkx/algorithms/communicability_alg.py +163 -0
  177. package/runtime/python/okstra_vendor/networkx/algorithms/community/__init__.py +28 -0
  178. package/runtime/python/okstra_vendor/networkx/algorithms/community/asyn_fluid.py +153 -0
  179. package/runtime/python/okstra_vendor/networkx/algorithms/community/bipartitions.py +354 -0
  180. package/runtime/python/okstra_vendor/networkx/algorithms/community/centrality.py +171 -0
  181. package/runtime/python/okstra_vendor/networkx/algorithms/community/community_utils.py +30 -0
  182. package/runtime/python/okstra_vendor/networkx/algorithms/community/divisive.py +216 -0
  183. package/runtime/python/okstra_vendor/networkx/algorithms/community/kclique.py +79 -0
  184. package/runtime/python/okstra_vendor/networkx/algorithms/community/label_propagation.py +338 -0
  185. package/runtime/python/okstra_vendor/networkx/algorithms/community/leiden.py +162 -0
  186. package/runtime/python/okstra_vendor/networkx/algorithms/community/local.py +220 -0
  187. package/runtime/python/okstra_vendor/networkx/algorithms/community/louvain.py +384 -0
  188. package/runtime/python/okstra_vendor/networkx/algorithms/community/lukes.py +227 -0
  189. package/runtime/python/okstra_vendor/networkx/algorithms/community/modularity_max.py +452 -0
  190. package/runtime/python/okstra_vendor/networkx/algorithms/community/quality.py +347 -0
  191. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/__init__.py +0 -0
  192. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_asyn_fluid.py +147 -0
  193. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_bipartitions.py +157 -0
  194. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_centrality.py +85 -0
  195. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_divisive.py +106 -0
  196. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_kclique.py +91 -0
  197. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_label_propagation.py +241 -0
  198. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_leiden.py +138 -0
  199. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_local.py +76 -0
  200. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_louvain.py +264 -0
  201. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_lukes.py +152 -0
  202. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_modularity_max.py +340 -0
  203. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_quality.py +139 -0
  204. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_utils.py +26 -0
  205. package/runtime/python/okstra_vendor/networkx/algorithms/components/__init__.py +6 -0
  206. package/runtime/python/okstra_vendor/networkx/algorithms/components/attracting.py +115 -0
  207. package/runtime/python/okstra_vendor/networkx/algorithms/components/biconnected.py +394 -0
  208. package/runtime/python/okstra_vendor/networkx/algorithms/components/connected.py +282 -0
  209. package/runtime/python/okstra_vendor/networkx/algorithms/components/semiconnected.py +71 -0
  210. package/runtime/python/okstra_vendor/networkx/algorithms/components/strongly_connected.py +359 -0
  211. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/__init__.py +0 -0
  212. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_attracting.py +70 -0
  213. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_biconnected.py +248 -0
  214. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_connected.py +138 -0
  215. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_semiconnected.py +55 -0
  216. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_strongly_connected.py +193 -0
  217. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_weakly_connected.py +96 -0
  218. package/runtime/python/okstra_vendor/networkx/algorithms/components/weakly_connected.py +196 -0
  219. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/__init__.py +11 -0
  220. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/connectivity.py +811 -0
  221. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/cuts.py +616 -0
  222. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/disjoint_paths.py +408 -0
  223. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/edge_augmentation.py +1270 -0
  224. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/edge_kcomponents.py +592 -0
  225. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/kcomponents.py +220 -0
  226. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/kcutsets.py +235 -0
  227. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/stoerwagner.py +152 -0
  228. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/__init__.py +0 -0
  229. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_connectivity.py +421 -0
  230. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_cuts.py +309 -0
  231. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_disjoint_paths.py +249 -0
  232. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_augmentation.py +502 -0
  233. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_kcomponents.py +488 -0
  234. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcomponents.py +323 -0
  235. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcutsets.py +280 -0
  236. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_stoer_wagner.py +102 -0
  237. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/utils.py +88 -0
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@@ -0,0 +1,1045 @@
1
+ import random
2
+
3
+ import pytest
4
+
5
+ import networkx as nx
6
+ from networkx.utils import edges_equal, nodes_equal
7
+
8
+
9
+ def test_degree_histogram_empty():
10
+ G = nx.Graph()
11
+ assert nx.degree_histogram(G) == []
12
+
13
+
14
+ class TestFunction:
15
+ def setup_method(self):
16
+ self.G = nx.Graph({0: [1, 2, 3], 1: [1, 2, 0], 4: []}, name="Test")
17
+ self.Gdegree = {0: 3, 1: 2, 2: 2, 3: 1, 4: 0}
18
+ self.Gnodes = list(range(5))
19
+ self.Gedges = [(0, 1), (0, 2), (0, 3), (1, 0), (1, 1), (1, 2)]
20
+ self.DG = nx.DiGraph({0: [1, 2, 3], 1: [1, 2, 0], 4: []})
21
+ self.DGin_degree = {0: 1, 1: 2, 2: 2, 3: 1, 4: 0}
22
+ self.DGout_degree = {0: 3, 1: 3, 2: 0, 3: 0, 4: 0}
23
+ self.DGnodes = list(range(5))
24
+ self.DGedges = [(0, 1), (0, 2), (0, 3), (1, 0), (1, 1), (1, 2)]
25
+
26
+ def test_describe_info_dict(self):
27
+ info_dict = nx.classes.function._create_describe_info_dict(self.G)
28
+ assert info_dict["Name of Graph"] == "Test"
29
+ assert not info_dict["Directed"]
30
+ assert not info_dict["Multigraph"]
31
+ assert info_dict["Number of nodes"] == 5
32
+ assert info_dict["Number of edges"] == 5
33
+ assert info_dict["Average degree (min, max)"] == "2.00 (0, 4)"
34
+ assert info_dict["Number of connected components"] == 2
35
+
36
+ def test_nodes(self):
37
+ assert nodes_equal(self.G.nodes(), list(nx.nodes(self.G)))
38
+ assert nodes_equal(self.DG.nodes(), list(nx.nodes(self.DG)))
39
+
40
+ def test_edges(self):
41
+ assert edges_equal(self.G.edges(), list(nx.edges(self.G)))
42
+ assert sorted(self.DG.edges()) == sorted(nx.edges(self.DG))
43
+ assert edges_equal(
44
+ self.G.edges(nbunch=[0, 1, 3]), list(nx.edges(self.G, nbunch=[0, 1, 3]))
45
+ )
46
+ assert sorted(self.DG.edges(nbunch=[0, 1, 3])) == sorted(
47
+ nx.edges(self.DG, nbunch=[0, 1, 3])
48
+ )
49
+
50
+ def test_degree(self):
51
+ assert edges_equal(self.G.degree(), list(nx.degree(self.G)))
52
+ assert sorted(self.DG.degree()) == sorted(nx.degree(self.DG))
53
+ assert edges_equal(
54
+ self.G.degree(nbunch=[0, 1]), list(nx.degree(self.G, nbunch=[0, 1]))
55
+ )
56
+ assert sorted(self.DG.degree(nbunch=[0, 1])) == sorted(
57
+ nx.degree(self.DG, nbunch=[0, 1])
58
+ )
59
+ assert edges_equal(
60
+ self.G.degree(weight="weight"), list(nx.degree(self.G, weight="weight"))
61
+ )
62
+ assert sorted(self.DG.degree(weight="weight")) == sorted(
63
+ nx.degree(self.DG, weight="weight")
64
+ )
65
+
66
+ def test_neighbors(self):
67
+ assert list(self.G.neighbors(1)) == list(nx.neighbors(self.G, 1))
68
+ assert list(self.DG.neighbors(1)) == list(nx.neighbors(self.DG, 1))
69
+
70
+ def test_number_of_nodes(self):
71
+ assert self.G.number_of_nodes() == nx.number_of_nodes(self.G)
72
+ assert self.DG.number_of_nodes() == nx.number_of_nodes(self.DG)
73
+
74
+ def test_number_of_edges(self):
75
+ assert self.G.number_of_edges() == nx.number_of_edges(self.G)
76
+ assert self.DG.number_of_edges() == nx.number_of_edges(self.DG)
77
+
78
+ def test_is_directed(self):
79
+ assert self.G.is_directed() == nx.is_directed(self.G)
80
+ assert self.DG.is_directed() == nx.is_directed(self.DG)
81
+
82
+ def test_add_star(self):
83
+ G = self.G.copy()
84
+ nlist = [12, 13, 14, 15]
85
+ nx.add_star(G, nlist)
86
+ assert edges_equal(G.edges(nlist), [(12, 13), (12, 14), (12, 15)])
87
+
88
+ G = self.G.copy()
89
+ nx.add_star(G, nlist, weight=2.0)
90
+ assert edges_equal(
91
+ G.edges(nlist, data=True),
92
+ [
93
+ (12, 13, {"weight": 2.0}),
94
+ (12, 14, {"weight": 2.0}),
95
+ (12, 15, {"weight": 2.0}),
96
+ ],
97
+ )
98
+
99
+ G = self.G.copy()
100
+ nlist = [12]
101
+ nx.add_star(G, nlist)
102
+ assert nodes_equal(G, list(self.G) + nlist)
103
+
104
+ G = self.G.copy()
105
+ nlist = []
106
+ nx.add_star(G, nlist)
107
+ assert nodes_equal(G.nodes, self.Gnodes)
108
+ assert edges_equal(G.edges, self.G.edges)
109
+
110
+ def test_add_path(self):
111
+ G = self.G.copy()
112
+ nlist = [12, 13, 14, 15]
113
+ nx.add_path(G, nlist)
114
+ assert edges_equal(G.edges(nlist), [(12, 13), (13, 14), (14, 15)])
115
+ G = self.G.copy()
116
+ nx.add_path(G, nlist, weight=2.0)
117
+ assert edges_equal(
118
+ G.edges(nlist, data=True),
119
+ [
120
+ (12, 13, {"weight": 2.0}),
121
+ (13, 14, {"weight": 2.0}),
122
+ (14, 15, {"weight": 2.0}),
123
+ ],
124
+ )
125
+
126
+ G = self.G.copy()
127
+ nlist = ["node"]
128
+ nx.add_path(G, nlist)
129
+ assert edges_equal(G.edges(nlist), [])
130
+ assert nodes_equal(G, list(self.G) + ["node"])
131
+
132
+ G = self.G.copy()
133
+ nlist = iter(["node"])
134
+ nx.add_path(G, nlist)
135
+ assert edges_equal(G.edges(["node"]), [])
136
+ assert nodes_equal(G, list(self.G) + ["node"])
137
+
138
+ G = self.G.copy()
139
+ nlist = [12]
140
+ nx.add_path(G, nlist)
141
+ assert edges_equal(G.edges(nlist), [])
142
+ assert nodes_equal(G, list(self.G) + [12])
143
+
144
+ G = self.G.copy()
145
+ nlist = iter([12])
146
+ nx.add_path(G, nlist)
147
+ assert edges_equal(G.edges([12]), [])
148
+ assert nodes_equal(G, list(self.G) + [12])
149
+
150
+ G = self.G.copy()
151
+ nlist = []
152
+ nx.add_path(G, nlist)
153
+ assert edges_equal(G.edges, self.G.edges)
154
+ assert nodes_equal(G, list(self.G))
155
+
156
+ G = self.G.copy()
157
+ nlist = iter([])
158
+ nx.add_path(G, nlist)
159
+ assert edges_equal(G.edges, self.G.edges)
160
+ assert nodes_equal(G, list(self.G))
161
+
162
+ def test_add_cycle(self):
163
+ G = self.G.copy()
164
+ nlist = [12, 13, 14, 15]
165
+ oklists = [
166
+ [(12, 13), (12, 15), (13, 14), (14, 15)],
167
+ [(12, 13), (13, 14), (14, 15), (15, 12)],
168
+ ]
169
+ nx.add_cycle(G, nlist)
170
+ assert sorted(G.edges(nlist)) in oklists
171
+ G = self.G.copy()
172
+ oklists = [
173
+ [
174
+ (12, 13, {"weight": 1.0}),
175
+ (12, 15, {"weight": 1.0}),
176
+ (13, 14, {"weight": 1.0}),
177
+ (14, 15, {"weight": 1.0}),
178
+ ],
179
+ [
180
+ (12, 13, {"weight": 1.0}),
181
+ (13, 14, {"weight": 1.0}),
182
+ (14, 15, {"weight": 1.0}),
183
+ (15, 12, {"weight": 1.0}),
184
+ ],
185
+ ]
186
+ nx.add_cycle(G, nlist, weight=1.0)
187
+ assert sorted(G.edges(nlist, data=True)) in oklists
188
+
189
+ G = self.G.copy()
190
+ nlist = [12]
191
+ nx.add_cycle(G, nlist)
192
+ assert nodes_equal(G, list(self.G) + nlist)
193
+
194
+ G = self.G.copy()
195
+ nlist = []
196
+ nx.add_cycle(G, nlist)
197
+ assert nodes_equal(G.nodes, self.Gnodes)
198
+ assert edges_equal(G.edges, self.G.edges)
199
+
200
+ def test_subgraph(self):
201
+ assert (
202
+ self.G.subgraph([0, 1, 2, 4]).adj == nx.subgraph(self.G, [0, 1, 2, 4]).adj
203
+ )
204
+ assert (
205
+ self.DG.subgraph([0, 1, 2, 4]).adj == nx.subgraph(self.DG, [0, 1, 2, 4]).adj
206
+ )
207
+ assert (
208
+ self.G.subgraph([0, 1, 2, 4]).adj
209
+ == nx.induced_subgraph(self.G, [0, 1, 2, 4]).adj
210
+ )
211
+ assert (
212
+ self.DG.subgraph([0, 1, 2, 4]).adj
213
+ == nx.induced_subgraph(self.DG, [0, 1, 2, 4]).adj
214
+ )
215
+ # subgraph-subgraph chain is allowed in function interface
216
+ H = nx.induced_subgraph(self.G.subgraph([0, 1, 2, 4]), [0, 1, 4])
217
+ assert H._graph is not self.G
218
+ assert H.adj == self.G.subgraph([0, 1, 4]).adj
219
+
220
+ def test_edge_subgraph(self):
221
+ assert (
222
+ self.G.edge_subgraph([(1, 2), (0, 3)]).adj
223
+ == nx.edge_subgraph(self.G, [(1, 2), (0, 3)]).adj
224
+ )
225
+ assert (
226
+ self.DG.edge_subgraph([(1, 2), (0, 3)]).adj
227
+ == nx.edge_subgraph(self.DG, [(1, 2), (0, 3)]).adj
228
+ )
229
+
230
+ def test_create_empty_copy(self):
231
+ G = nx.create_empty_copy(self.G, with_data=False)
232
+ assert nodes_equal(G, list(self.G))
233
+ assert G.graph == {}
234
+ assert G._node == {}.fromkeys(self.G.nodes(), {})
235
+ assert G._adj == {}.fromkeys(self.G.nodes(), {})
236
+ G = nx.create_empty_copy(self.G)
237
+ assert nodes_equal(G, list(self.G))
238
+ assert G.graph == self.G.graph
239
+ assert G._node == self.G._node
240
+ assert G._adj == {}.fromkeys(self.G.nodes(), {})
241
+
242
+ def test_degree_histogram(self):
243
+ assert nx.degree_histogram(self.G) == [1, 1, 1, 1, 1]
244
+
245
+ def test_density(self):
246
+ assert nx.density(self.G) == 0.5
247
+ assert nx.density(self.DG) == 0.3
248
+ G = nx.Graph()
249
+ G.add_node(1)
250
+ assert nx.density(G) == 0.0
251
+
252
+ def test_density_selfloop(self):
253
+ G = nx.Graph()
254
+ G.add_edge(1, 1)
255
+ assert nx.density(G) == 0.0
256
+ G.add_edge(1, 2)
257
+ assert nx.density(G) == 2.0
258
+
259
+ def test_freeze(self):
260
+ G = nx.freeze(self.G)
261
+ assert G.frozen
262
+ pytest.raises(nx.NetworkXError, G.add_node, 1)
263
+ pytest.raises(nx.NetworkXError, G.add_nodes_from, [1])
264
+ pytest.raises(nx.NetworkXError, G.remove_node, 1)
265
+ pytest.raises(nx.NetworkXError, G.remove_nodes_from, [1])
266
+ pytest.raises(nx.NetworkXError, G.add_edge, 1, 2)
267
+ pytest.raises(nx.NetworkXError, G.add_edges_from, [(1, 2)])
268
+ pytest.raises(nx.NetworkXError, G.remove_edge, 1, 2)
269
+ pytest.raises(nx.NetworkXError, G.remove_edges_from, [(1, 2)])
270
+ pytest.raises(nx.NetworkXError, G.clear_edges)
271
+ pytest.raises(nx.NetworkXError, G.clear)
272
+
273
+ def test_is_frozen(self):
274
+ assert not nx.is_frozen(self.G)
275
+ G = nx.freeze(self.G)
276
+ assert G.frozen == nx.is_frozen(self.G)
277
+ assert G.frozen
278
+
279
+ def test_node_attributes_are_still_mutable_on_frozen_graph(self):
280
+ G = nx.freeze(nx.path_graph(3))
281
+ node = G.nodes[0]
282
+ node["node_attribute"] = True
283
+ assert node["node_attribute"] is True
284
+
285
+ def test_edge_attributes_are_still_mutable_on_frozen_graph(self):
286
+ G = nx.freeze(nx.path_graph(3))
287
+ edge = G.edges[(0, 1)]
288
+ edge["edge_attribute"] = True
289
+ assert edge["edge_attribute"] is True
290
+
291
+ def test_neighbors_complete_graph(self):
292
+ graph = nx.complete_graph(100)
293
+ pop = random.sample(list(graph), 1)
294
+ nbors = list(nx.neighbors(graph, pop[0]))
295
+ # should be all the other vertices in the graph
296
+ assert len(nbors) == len(graph) - 1
297
+
298
+ graph = nx.path_graph(100)
299
+ node = random.sample(list(graph), 1)[0]
300
+ nbors = list(nx.neighbors(graph, node))
301
+ # should be all the other vertices in the graph
302
+ if node != 0 and node != 99:
303
+ assert len(nbors) == 2
304
+ else:
305
+ assert len(nbors) == 1
306
+
307
+ # create a star graph with 99 outer nodes
308
+ graph = nx.star_graph(99)
309
+ nbors = list(nx.neighbors(graph, 0))
310
+ assert len(nbors) == 99
311
+
312
+ def test_non_neighbors(self):
313
+ graph = nx.complete_graph(100)
314
+ pop = random.sample(list(graph), 1)
315
+ nbors = nx.non_neighbors(graph, pop[0])
316
+ # should be all the other vertices in the graph
317
+ assert len(nbors) == 0
318
+
319
+ graph = nx.path_graph(100)
320
+ node = random.sample(list(graph), 1)[0]
321
+ nbors = nx.non_neighbors(graph, node)
322
+ # should be all the other vertices in the graph
323
+ if node != 0 and node != 99:
324
+ assert len(nbors) == 97
325
+ else:
326
+ assert len(nbors) == 98
327
+
328
+ # create a star graph with 99 outer nodes
329
+ graph = nx.star_graph(99)
330
+ nbors = nx.non_neighbors(graph, 0)
331
+ assert len(nbors) == 0
332
+
333
+ # disconnected graph
334
+ graph = nx.Graph()
335
+ graph.add_nodes_from(range(10))
336
+ nbors = nx.non_neighbors(graph, 0)
337
+ assert len(nbors) == 9
338
+
339
+ def test_non_edges(self):
340
+ # All possible edges exist
341
+ graph = nx.complete_graph(5)
342
+ nedges = list(nx.non_edges(graph))
343
+ assert len(nedges) == 0
344
+
345
+ graph = nx.path_graph(4)
346
+ expected = [(0, 2), (0, 3), (1, 3)]
347
+ nedges = list(nx.non_edges(graph))
348
+ for u, v in expected:
349
+ assert (u, v) in nedges or (v, u) in nedges
350
+
351
+ graph = nx.star_graph(4)
352
+ expected = [(1, 2), (1, 3), (1, 4), (2, 3), (2, 4), (3, 4)]
353
+ nedges = list(nx.non_edges(graph))
354
+ for u, v in expected:
355
+ assert (u, v) in nedges or (v, u) in nedges
356
+
357
+ # Directed graphs
358
+ graph = nx.DiGraph()
359
+ graph.add_edges_from([(0, 2), (2, 0), (2, 1)])
360
+ expected = [(0, 1), (1, 0), (1, 2)]
361
+ nedges = list(nx.non_edges(graph))
362
+ for e in expected:
363
+ assert e in nedges
364
+
365
+ def test_is_weighted(self):
366
+ G = nx.Graph()
367
+ assert not nx.is_weighted(G)
368
+
369
+ G = nx.path_graph(4)
370
+ assert not nx.is_weighted(G)
371
+ assert not nx.is_weighted(G, (2, 3))
372
+
373
+ G.add_node(4)
374
+ G.add_edge(3, 4, weight=4)
375
+ assert not nx.is_weighted(G)
376
+ assert nx.is_weighted(G, (3, 4))
377
+
378
+ G = nx.DiGraph()
379
+ G.add_weighted_edges_from(
380
+ [
381
+ ("0", "3", 3),
382
+ ("0", "1", -5),
383
+ ("1", "0", -5),
384
+ ("0", "2", 2),
385
+ ("1", "2", 4),
386
+ ("2", "3", 1),
387
+ ]
388
+ )
389
+ assert nx.is_weighted(G)
390
+ assert nx.is_weighted(G, ("1", "0"))
391
+
392
+ G = G.to_undirected()
393
+ assert nx.is_weighted(G)
394
+ assert nx.is_weighted(G, ("1", "0"))
395
+
396
+ pytest.raises(nx.NetworkXError, nx.is_weighted, G, (1, 2))
397
+
398
+ def test_is_negatively_weighted(self):
399
+ G = nx.Graph()
400
+ assert not nx.is_negatively_weighted(G)
401
+
402
+ G.add_node(1)
403
+ G.add_nodes_from([2, 3, 4, 5])
404
+ assert not nx.is_negatively_weighted(G)
405
+
406
+ G.add_edge(1, 2, weight=4)
407
+ assert not nx.is_negatively_weighted(G, (1, 2))
408
+
409
+ G.add_edges_from([(1, 3), (2, 4), (2, 6)])
410
+ G[1][3]["color"] = "blue"
411
+ assert not nx.is_negatively_weighted(G)
412
+ assert not nx.is_negatively_weighted(G, (1, 3))
413
+
414
+ G[2][4]["weight"] = -2
415
+ assert nx.is_negatively_weighted(G, (2, 4))
416
+ assert nx.is_negatively_weighted(G)
417
+
418
+ G = nx.DiGraph()
419
+ G.add_weighted_edges_from(
420
+ [
421
+ ("0", "3", 3),
422
+ ("0", "1", -5),
423
+ ("1", "0", -2),
424
+ ("0", "2", 2),
425
+ ("1", "2", -3),
426
+ ("2", "3", 1),
427
+ ]
428
+ )
429
+ assert nx.is_negatively_weighted(G)
430
+ assert not nx.is_negatively_weighted(G, ("0", "3"))
431
+ assert nx.is_negatively_weighted(G, ("1", "0"))
432
+
433
+ pytest.raises(nx.NetworkXError, nx.is_negatively_weighted, G, (1, 4))
434
+
435
+
436
+ class TestCommonNeighbors:
437
+ @classmethod
438
+ def setup_class(cls):
439
+ cls.func = staticmethod(nx.common_neighbors)
440
+
441
+ def test_func(G, u, v, expected):
442
+ result = sorted(cls.func(G, u, v))
443
+ assert result == expected
444
+
445
+ cls.test = staticmethod(test_func)
446
+
447
+ def test_K5(self):
448
+ G = nx.complete_graph(5)
449
+ self.test(G, 0, 1, [2, 3, 4])
450
+
451
+ def test_P3(self):
452
+ G = nx.path_graph(3)
453
+ self.test(G, 0, 2, [1])
454
+
455
+ def test_S4(self):
456
+ G = nx.star_graph(4)
457
+ self.test(G, 1, 2, [0])
458
+
459
+ def test_digraph(self):
460
+ with pytest.raises(nx.NetworkXNotImplemented):
461
+ G = nx.DiGraph()
462
+ G.add_edges_from([(0, 1), (1, 2)])
463
+ self.func(G, 0, 2)
464
+
465
+ def test_nonexistent_nodes(self):
466
+ G = nx.complete_graph(5)
467
+ pytest.raises(nx.NetworkXError, nx.common_neighbors, G, 5, 4)
468
+ pytest.raises(nx.NetworkXError, nx.common_neighbors, G, 4, 5)
469
+ pytest.raises(nx.NetworkXError, nx.common_neighbors, G, 5, 6)
470
+
471
+ def test_custom1(self):
472
+ """Case of no common neighbors."""
473
+ G = nx.Graph()
474
+ G.add_nodes_from([0, 1])
475
+ self.test(G, 0, 1, [])
476
+
477
+ def test_custom2(self):
478
+ """Case of equal nodes."""
479
+ G = nx.complete_graph(4)
480
+ self.test(G, 0, 0, [1, 2, 3])
481
+
482
+
483
+ @pytest.mark.parametrize(
484
+ "graph_type", (nx.Graph, nx.DiGraph, nx.MultiGraph, nx.MultiDiGraph)
485
+ )
486
+ def test_set_node_attributes(graph_type):
487
+ # Test single value
488
+ G = nx.path_graph(3, create_using=graph_type)
489
+ vals = 100
490
+ attr = "hello"
491
+ nx.set_node_attributes(G, vals, attr)
492
+ assert G.nodes[0][attr] == vals
493
+ assert G.nodes[1][attr] == vals
494
+ assert G.nodes[2][attr] == vals
495
+
496
+ # Test dictionary
497
+ G = nx.path_graph(3, create_using=graph_type)
498
+ vals = dict(zip(sorted(G.nodes()), range(len(G))))
499
+ attr = "hi"
500
+ nx.set_node_attributes(G, vals, attr)
501
+ assert G.nodes[0][attr] == 0
502
+ assert G.nodes[1][attr] == 1
503
+ assert G.nodes[2][attr] == 2
504
+
505
+ # Test dictionary of dictionaries
506
+ G = nx.path_graph(3, create_using=graph_type)
507
+ d = {"hi": 0, "hello": 200}
508
+ vals = dict.fromkeys(G.nodes(), d)
509
+ vals.pop(0)
510
+ nx.set_node_attributes(G, vals)
511
+ assert G.nodes[0] == {}
512
+ assert G.nodes[1]["hi"] == 0
513
+ assert G.nodes[2]["hello"] == 200
514
+
515
+
516
+ @pytest.mark.parametrize(
517
+ ("values", "name"),
518
+ (
519
+ ({0: "red", 1: "blue"}, "color"), # values dictionary
520
+ ({0: {"color": "red"}, 1: {"color": "blue"}}, None), # dict-of-dict
521
+ ),
522
+ )
523
+ def test_set_node_attributes_ignores_extra_nodes(values, name):
524
+ """
525
+ When `values` is a dict or dict-of-dict keyed by nodes, ensure that keys
526
+ that correspond to nodes not in G are ignored.
527
+ """
528
+ G = nx.Graph()
529
+ G.add_node(0)
530
+ nx.set_node_attributes(G, values, name)
531
+ assert G.nodes[0]["color"] == "red"
532
+ assert 1 not in G.nodes
533
+
534
+
535
+ @pytest.mark.parametrize("graph_type", (nx.Graph, nx.DiGraph))
536
+ def test_set_edge_attributes(graph_type):
537
+ # Test single value
538
+ G = nx.path_graph(3, create_using=graph_type)
539
+ attr = "hello"
540
+ vals = 3
541
+ nx.set_edge_attributes(G, vals, attr)
542
+ assert G[0][1][attr] == vals
543
+ assert G[1][2][attr] == vals
544
+
545
+ # Test multiple values
546
+ G = nx.path_graph(3, create_using=graph_type)
547
+ attr = "hi"
548
+ edges = [(0, 1), (1, 2)]
549
+ vals = dict(zip(edges, range(len(edges))))
550
+ nx.set_edge_attributes(G, vals, attr)
551
+ assert G[0][1][attr] == 0
552
+ assert G[1][2][attr] == 1
553
+
554
+ # Test dictionary of dictionaries
555
+ G = nx.path_graph(3, create_using=graph_type)
556
+ d = {"hi": 0, "hello": 200}
557
+ edges = [(0, 1)]
558
+ vals = dict.fromkeys(edges, d)
559
+ nx.set_edge_attributes(G, vals)
560
+ assert G[0][1]["hi"] == 0
561
+ assert G[0][1]["hello"] == 200
562
+ assert G[1][2] == {}
563
+
564
+
565
+ @pytest.mark.parametrize(
566
+ ("values", "name"),
567
+ (
568
+ ({(0, 1): 1.0, (0, 2): 2.0}, "weight"), # values dict
569
+ ({(0, 1): {"weight": 1.0}, (0, 2): {"weight": 2.0}}, None), # values dod
570
+ ),
571
+ )
572
+ def test_set_edge_attributes_ignores_extra_edges(values, name):
573
+ """If `values` is a dict or dict-of-dicts containing edges that are not in
574
+ G, data associate with these edges should be ignored.
575
+ """
576
+ G = nx.Graph([(0, 1)])
577
+ nx.set_edge_attributes(G, values, name)
578
+ assert G[0][1]["weight"] == 1.0
579
+ assert (0, 2) not in G.edges
580
+
581
+
582
+ @pytest.mark.parametrize("graph_type", (nx.MultiGraph, nx.MultiDiGraph))
583
+ def test_set_edge_attributes_multi(graph_type):
584
+ # Test single value
585
+ G = nx.path_graph(3, create_using=graph_type)
586
+ attr = "hello"
587
+ vals = 3
588
+ nx.set_edge_attributes(G, vals, attr)
589
+ assert G[0][1][0][attr] == vals
590
+ assert G[1][2][0][attr] == vals
591
+
592
+ # Test multiple values
593
+ G = nx.path_graph(3, create_using=graph_type)
594
+ attr = "hi"
595
+ edges = [(0, 1, 0), (1, 2, 0)]
596
+ vals = dict(zip(edges, range(len(edges))))
597
+ nx.set_edge_attributes(G, vals, attr)
598
+ assert G[0][1][0][attr] == 0
599
+ assert G[1][2][0][attr] == 1
600
+
601
+ # Test dictionary of dictionaries
602
+ G = nx.path_graph(3, create_using=graph_type)
603
+ d = {"hi": 0, "hello": 200}
604
+ edges = [(0, 1, 0)]
605
+ vals = dict.fromkeys(edges, d)
606
+ nx.set_edge_attributes(G, vals)
607
+ assert G[0][1][0]["hi"] == 0
608
+ assert G[0][1][0]["hello"] == 200
609
+ assert G[1][2][0] == {}
610
+
611
+
612
+ @pytest.mark.parametrize(
613
+ ("values", "name"),
614
+ (
615
+ ({(0, 1, 0): 1.0, (0, 2, 0): 2.0}, "weight"), # values dict
616
+ ({(0, 1, 0): {"weight": 1.0}, (0, 2, 0): {"weight": 2.0}}, None), # values dod
617
+ ),
618
+ )
619
+ def test_set_edge_attributes_multi_ignores_extra_edges(values, name):
620
+ """If `values` is a dict or dict-of-dicts containing edges that are not in
621
+ G, data associate with these edges should be ignored.
622
+ """
623
+ G = nx.MultiGraph([(0, 1, 0), (0, 1, 1)])
624
+ nx.set_edge_attributes(G, values, name)
625
+ assert G[0][1][0]["weight"] == 1.0
626
+ assert G[0][1][1] == {}
627
+ assert (0, 2) not in G.edges()
628
+
629
+
630
+ def test_get_node_attributes():
631
+ graphs = [nx.Graph(), nx.DiGraph(), nx.MultiGraph(), nx.MultiDiGraph()]
632
+ for G in graphs:
633
+ G = nx.path_graph(3, create_using=G)
634
+ attr = "hello"
635
+ vals = 100
636
+ nx.set_node_attributes(G, vals, attr)
637
+ attrs = nx.get_node_attributes(G, attr)
638
+ assert attrs[0] == vals
639
+ assert attrs[1] == vals
640
+ assert attrs[2] == vals
641
+ default_val = 1
642
+ G.add_node(4)
643
+ attrs = nx.get_node_attributes(G, attr, default=default_val)
644
+ assert attrs[4] == default_val
645
+
646
+
647
+ def test_get_edge_attributes():
648
+ graphs = [nx.Graph(), nx.DiGraph(), nx.MultiGraph(), nx.MultiDiGraph()]
649
+ for G in graphs:
650
+ G = nx.path_graph(3, create_using=G)
651
+ attr = "hello"
652
+ vals = 100
653
+ nx.set_edge_attributes(G, vals, attr)
654
+ attrs = nx.get_edge_attributes(G, attr)
655
+ assert len(attrs) == 2
656
+
657
+ for edge in G.edges:
658
+ assert attrs[edge] == vals
659
+
660
+ default_val = vals
661
+ G.add_edge(4, 5)
662
+ deafult_attrs = nx.get_edge_attributes(G, attr, default=default_val)
663
+ assert len(deafult_attrs) == 3
664
+
665
+ for edge in G.edges:
666
+ assert deafult_attrs[edge] == vals
667
+
668
+
669
+ @pytest.mark.parametrize(
670
+ "graph_type", (nx.Graph, nx.DiGraph, nx.MultiGraph, nx.MultiDiGraph)
671
+ )
672
+ def test_remove_node_attributes(graph_type):
673
+ # Test removing single attribute
674
+ G = nx.path_graph(3, create_using=graph_type)
675
+ vals = 100
676
+ attr = "hello"
677
+ nx.set_node_attributes(G, vals, attr)
678
+ nx.remove_node_attributes(G, attr)
679
+ assert attr not in G.nodes[0]
680
+ assert attr not in G.nodes[1]
681
+ assert attr not in G.nodes[2]
682
+
683
+ # Test removing single attribute when multiple present
684
+ G = nx.path_graph(3, create_using=graph_type)
685
+ other_vals = 200
686
+ other_attr = "other"
687
+ nx.set_node_attributes(G, vals, attr)
688
+ nx.set_node_attributes(G, other_vals, other_attr)
689
+ nx.remove_node_attributes(G, attr)
690
+ assert attr not in G.nodes[0]
691
+ assert G.nodes[0][other_attr] == other_vals
692
+ assert attr not in G.nodes[1]
693
+ assert G.nodes[1][other_attr] == other_vals
694
+ assert attr not in G.nodes[2]
695
+ assert G.nodes[2][other_attr] == other_vals
696
+
697
+ # Test removing multiple attributes
698
+ G = nx.path_graph(3, create_using=graph_type)
699
+ nx.set_node_attributes(G, vals, attr)
700
+ nx.set_node_attributes(G, other_vals, other_attr)
701
+ nx.remove_node_attributes(G, attr, other_attr)
702
+ assert attr not in G.nodes[0] and other_attr not in G.nodes[0]
703
+ assert attr not in G.nodes[1] and other_attr not in G.nodes[1]
704
+ assert attr not in G.nodes[2] and other_attr not in G.nodes[2]
705
+
706
+ # Test removing multiple (but not all) attributes
707
+ G = nx.path_graph(3, create_using=graph_type)
708
+ third_vals = 300
709
+ third_attr = "three"
710
+ nx.set_node_attributes(
711
+ G,
712
+ {
713
+ n: {attr: vals, other_attr: other_vals, third_attr: third_vals}
714
+ for n in G.nodes()
715
+ },
716
+ )
717
+ nx.remove_node_attributes(G, other_attr, third_attr)
718
+ assert other_attr not in G.nodes[0] and third_attr not in G.nodes[0]
719
+ assert other_attr not in G.nodes[1] and third_attr not in G.nodes[1]
720
+ assert other_attr not in G.nodes[2] and third_attr not in G.nodes[2]
721
+ assert G.nodes[0][attr] == vals
722
+ assert G.nodes[1][attr] == vals
723
+ assert G.nodes[2][attr] == vals
724
+
725
+ # Test incomplete node attributes
726
+ G = nx.path_graph(3, create_using=graph_type)
727
+ nx.set_node_attributes(
728
+ G,
729
+ {
730
+ 1: {attr: vals, other_attr: other_vals},
731
+ 2: {attr: vals, other_attr: other_vals},
732
+ },
733
+ )
734
+ nx.remove_node_attributes(G, attr)
735
+ assert attr not in G.nodes[0]
736
+ assert attr not in G.nodes[1]
737
+ assert attr not in G.nodes[2]
738
+ assert G.nodes[1][other_attr] == other_vals
739
+ assert G.nodes[2][other_attr] == other_vals
740
+
741
+ # Test removing on a subset of nodes
742
+ G = nx.path_graph(3, create_using=graph_type)
743
+ nx.set_node_attributes(
744
+ G,
745
+ {
746
+ n: {attr: vals, other_attr: other_vals, third_attr: third_vals}
747
+ for n in G.nodes()
748
+ },
749
+ )
750
+ nx.remove_node_attributes(G, attr, other_attr, nbunch=[0, 1])
751
+ assert attr not in G.nodes[0] and other_attr not in G.nodes[0]
752
+ assert attr not in G.nodes[1] and other_attr not in G.nodes[1]
753
+ assert attr in G.nodes[2] and other_attr in G.nodes[2]
754
+ assert third_attr in G.nodes[0] and G.nodes[0][third_attr] == third_vals
755
+ assert third_attr in G.nodes[1] and G.nodes[1][third_attr] == third_vals
756
+
757
+
758
+ @pytest.mark.parametrize("graph_type", (nx.Graph, nx.DiGraph))
759
+ def test_remove_edge_attributes(graph_type):
760
+ # Test removing single attribute
761
+ G = nx.path_graph(3, create_using=graph_type)
762
+ attr = "hello"
763
+ vals = 100
764
+ nx.set_edge_attributes(G, vals, attr)
765
+ nx.remove_edge_attributes(G, attr)
766
+ assert len(nx.get_edge_attributes(G, attr)) == 0
767
+
768
+ # Test removing only some attributes
769
+ G = nx.path_graph(3, create_using=graph_type)
770
+ other_attr = "other"
771
+ other_vals = 200
772
+ nx.set_edge_attributes(G, vals, attr)
773
+ nx.set_edge_attributes(G, other_vals, other_attr)
774
+ nx.remove_edge_attributes(G, attr)
775
+
776
+ assert attr not in G[0][1]
777
+ assert attr not in G[1][2]
778
+ assert G[0][1][other_attr] == 200
779
+ assert G[1][2][other_attr] == 200
780
+
781
+ # Test removing multiple attributes
782
+ G = nx.path_graph(3, create_using=graph_type)
783
+ nx.set_edge_attributes(G, vals, attr)
784
+ nx.set_edge_attributes(G, other_vals, other_attr)
785
+ nx.remove_edge_attributes(G, attr, other_attr)
786
+ assert attr not in G[0][1] and other_attr not in G[0][1]
787
+ assert attr not in G[1][2] and other_attr not in G[1][2]
788
+
789
+ # Test removing multiple (not all) attributes
790
+ G = nx.path_graph(3, create_using=graph_type)
791
+ third_attr = "third"
792
+ third_vals = 300
793
+ nx.set_edge_attributes(
794
+ G,
795
+ {
796
+ (u, v): {attr: vals, other_attr: other_vals, third_attr: third_vals}
797
+ for u, v in G.edges()
798
+ },
799
+ )
800
+ nx.remove_edge_attributes(G, other_attr, third_attr)
801
+ assert other_attr not in G[0][1] and third_attr not in G[0][1]
802
+ assert other_attr not in G[1][2] and third_attr not in G[1][2]
803
+ assert G[0][1][attr] == vals
804
+ assert G[1][2][attr] == vals
805
+
806
+ # Test removing incomplete edge attributes
807
+ G = nx.path_graph(3, create_using=graph_type)
808
+ nx.set_edge_attributes(G, {(0, 1): {attr: vals, other_attr: other_vals}})
809
+ nx.remove_edge_attributes(G, other_attr)
810
+ assert other_attr not in G[0][1] and G[0][1][attr] == vals
811
+ assert other_attr not in G[1][2]
812
+
813
+ # Test removing subset of edge attributes
814
+ G = nx.path_graph(3, create_using=graph_type)
815
+ nx.set_edge_attributes(
816
+ G,
817
+ {
818
+ (u, v): {attr: vals, other_attr: other_vals, third_attr: third_vals}
819
+ for u, v in G.edges()
820
+ },
821
+ )
822
+ nx.remove_edge_attributes(G, other_attr, third_attr, ebunch=[(0, 1)])
823
+ assert other_attr not in G[0][1] and third_attr not in G[0][1]
824
+ assert other_attr in G[1][2] and third_attr in G[1][2]
825
+
826
+
827
+ @pytest.mark.parametrize("graph_type", (nx.MultiGraph, nx.MultiDiGraph))
828
+ def test_remove_multi_edge_attributes(graph_type):
829
+ # Test removing single attribute
830
+ G = nx.path_graph(3, create_using=graph_type)
831
+ G.add_edge(1, 2)
832
+ attr = "hello"
833
+ vals = 100
834
+ nx.set_edge_attributes(G, vals, attr)
835
+ nx.remove_edge_attributes(G, attr)
836
+ assert attr not in G[0][1][0]
837
+ assert attr not in G[1][2][0]
838
+ assert attr not in G[1][2][1]
839
+
840
+ # Test removing only some attributes
841
+ G = nx.path_graph(3, create_using=graph_type)
842
+ G.add_edge(1, 2)
843
+ other_attr = "other"
844
+ other_vals = 200
845
+ nx.set_edge_attributes(G, vals, attr)
846
+ nx.set_edge_attributes(G, other_vals, other_attr)
847
+ nx.remove_edge_attributes(G, attr)
848
+ assert attr not in G[0][1][0]
849
+ assert attr not in G[1][2][0]
850
+ assert attr not in G[1][2][1]
851
+ assert G[0][1][0][other_attr] == other_vals
852
+ assert G[1][2][0][other_attr] == other_vals
853
+ assert G[1][2][1][other_attr] == other_vals
854
+
855
+ # Test removing multiple attributes
856
+ G = nx.path_graph(3, create_using=graph_type)
857
+ G.add_edge(1, 2)
858
+ nx.set_edge_attributes(G, vals, attr)
859
+ nx.set_edge_attributes(G, other_vals, other_attr)
860
+ nx.remove_edge_attributes(G, attr, other_attr)
861
+ assert attr not in G[0][1][0] and other_attr not in G[0][1][0]
862
+ assert attr not in G[1][2][0] and other_attr not in G[1][2][0]
863
+ assert attr not in G[1][2][1] and other_attr not in G[1][2][1]
864
+
865
+ # Test removing multiple (not all) attributes
866
+ G = nx.path_graph(3, create_using=graph_type)
867
+ G.add_edge(1, 2)
868
+ third_attr = "third"
869
+ third_vals = 300
870
+ nx.set_edge_attributes(
871
+ G,
872
+ {
873
+ (u, v, k): {attr: vals, other_attr: other_vals, third_attr: third_vals}
874
+ for u, v, k in G.edges(keys=True)
875
+ },
876
+ )
877
+ nx.remove_edge_attributes(G, other_attr, third_attr)
878
+ assert other_attr not in G[0][1][0] and third_attr not in G[0][1][0]
879
+ assert other_attr not in G[1][2][0] and other_attr not in G[1][2][0]
880
+ assert other_attr not in G[1][2][1] and other_attr not in G[1][2][1]
881
+ assert G[0][1][0][attr] == vals
882
+ assert G[1][2][0][attr] == vals
883
+ assert G[1][2][1][attr] == vals
884
+
885
+ # Test removing incomplete edge attributes
886
+ G = nx.path_graph(3, create_using=graph_type)
887
+ G.add_edge(1, 2)
888
+ nx.set_edge_attributes(
889
+ G,
890
+ {
891
+ (0, 1, 0): {attr: vals, other_attr: other_vals},
892
+ (1, 2, 1): {attr: vals, other_attr: other_vals},
893
+ },
894
+ )
895
+ nx.remove_edge_attributes(G, other_attr)
896
+ assert other_attr not in G[0][1][0] and G[0][1][0][attr] == vals
897
+ assert other_attr not in G[1][2][0]
898
+ assert other_attr not in G[1][2][1]
899
+
900
+ # Test removing subset of edge attributes
901
+ G = nx.path_graph(3, create_using=graph_type)
902
+ G.add_edge(1, 2)
903
+ nx.set_edge_attributes(
904
+ G,
905
+ {
906
+ (0, 1, 0): {attr: vals, other_attr: other_vals},
907
+ (1, 2, 0): {attr: vals, other_attr: other_vals},
908
+ (1, 2, 1): {attr: vals, other_attr: other_vals},
909
+ },
910
+ )
911
+ nx.remove_edge_attributes(G, attr, ebunch=[(0, 1, 0), (1, 2, 0)])
912
+ assert attr not in G[0][1][0] and other_attr in G[0][1][0]
913
+ assert attr not in G[1][2][0] and other_attr in G[1][2][0]
914
+ assert attr in G[1][2][1] and other_attr in G[1][2][1]
915
+
916
+
917
+ def test_is_empty():
918
+ graphs = [nx.Graph(), nx.DiGraph(), nx.MultiGraph(), nx.MultiDiGraph()]
919
+ for G in graphs:
920
+ assert nx.is_empty(G)
921
+ G.add_nodes_from(range(5))
922
+ assert nx.is_empty(G)
923
+ G.add_edges_from([(1, 2), (3, 4)])
924
+ assert not nx.is_empty(G)
925
+
926
+
927
+ @pytest.mark.parametrize(
928
+ "graph_type", [nx.Graph, nx.DiGraph, nx.MultiGraph, nx.MultiDiGraph]
929
+ )
930
+ def test_selfloops(graph_type):
931
+ G = nx.complete_graph(3, create_using=graph_type)
932
+ G.add_edge(0, 0)
933
+ assert nodes_equal(nx.nodes_with_selfloops(G), [0])
934
+ assert edges_equal(nx.selfloop_edges(G), [(0, 0)])
935
+ assert edges_equal(nx.selfloop_edges(G, data=True), [(0, 0, {})])
936
+ assert nx.number_of_selfloops(G) == 1
937
+
938
+
939
+ @pytest.mark.parametrize(
940
+ "graph_type", [nx.Graph, nx.DiGraph, nx.MultiGraph, nx.MultiDiGraph]
941
+ )
942
+ def test_selfloop_edges_attr(graph_type):
943
+ G = nx.complete_graph(3, create_using=graph_type)
944
+ G.add_edge(0, 0)
945
+ G.add_edge(1, 1, weight=2)
946
+ assert edges_equal(
947
+ nx.selfloop_edges(G, data=True), [(0, 0, {}), (1, 1, {"weight": 2})]
948
+ )
949
+ assert edges_equal(nx.selfloop_edges(G, data="weight"), [(0, 0, None), (1, 1, 2)])
950
+
951
+
952
+ def test_selfloop_edges_multi_with_data_and_keys():
953
+ G = nx.complete_graph(3, create_using=nx.MultiGraph)
954
+ G.add_edge(0, 0, weight=10)
955
+ G.add_edge(0, 0, weight=100)
956
+ assert edges_equal(
957
+ nx.selfloop_edges(G, data="weight", keys=True), [(0, 0, 0, 10), (0, 0, 1, 100)]
958
+ )
959
+
960
+
961
+ @pytest.mark.parametrize("graph_type", [nx.Graph, nx.DiGraph])
962
+ def test_selfloops_removal(graph_type):
963
+ G = nx.complete_graph(3, create_using=graph_type)
964
+ G.add_edge(0, 0)
965
+ G.remove_edges_from(nx.selfloop_edges(G, keys=True))
966
+ G.add_edge(0, 0)
967
+ G.remove_edges_from(nx.selfloop_edges(G, data=True))
968
+ G.add_edge(0, 0)
969
+ G.remove_edges_from(nx.selfloop_edges(G, keys=True, data=True))
970
+
971
+
972
+ @pytest.mark.parametrize("graph_type", [nx.MultiGraph, nx.MultiDiGraph])
973
+ def test_selfloops_removal_multi(graph_type):
974
+ """test removing selfloops behavior vis-a-vis altering a dict while iterating.
975
+ cf. gh-4068"""
976
+ G = nx.complete_graph(3, create_using=graph_type)
977
+ # Defaults - see gh-4080
978
+ G.add_edge(0, 0)
979
+ G.add_edge(0, 0)
980
+ G.remove_edges_from(nx.selfloop_edges(G))
981
+ assert (0, 0) not in G.edges()
982
+ # With keys
983
+ G.add_edge(0, 0)
984
+ G.add_edge(0, 0)
985
+ with pytest.raises(RuntimeError):
986
+ G.remove_edges_from(nx.selfloop_edges(G, keys=True))
987
+ # With data
988
+ G.add_edge(0, 0)
989
+ G.add_edge(0, 0)
990
+ with pytest.raises(TypeError):
991
+ G.remove_edges_from(nx.selfloop_edges(G, data=True))
992
+ # With keys and data
993
+ G.add_edge(0, 0)
994
+ G.add_edge(0, 0)
995
+ with pytest.raises(RuntimeError):
996
+ G.remove_edges_from(nx.selfloop_edges(G, data=True, keys=True))
997
+
998
+
999
+ def test_pathweight():
1000
+ valid_path = [1, 2, 3]
1001
+ invalid_path = [1, 3, 2]
1002
+ graphs = [nx.Graph(), nx.DiGraph(), nx.MultiGraph(), nx.MultiDiGraph()]
1003
+ edges = [
1004
+ (1, 2, {"cost": 5, "dist": 6}),
1005
+ (2, 3, {"cost": 3, "dist": 4}),
1006
+ (1, 2, {"cost": 1, "dist": 2}),
1007
+ ]
1008
+ for graph in graphs:
1009
+ graph.add_edges_from(edges)
1010
+ assert nx.path_weight(graph, valid_path, "cost") == 4
1011
+ assert nx.path_weight(graph, valid_path, "dist") == 6
1012
+ pytest.raises(nx.NetworkXNoPath, nx.path_weight, graph, invalid_path, "cost")
1013
+
1014
+
1015
+ @pytest.mark.parametrize(
1016
+ "G", (nx.Graph(), nx.DiGraph(), nx.MultiGraph(), nx.MultiDiGraph())
1017
+ )
1018
+ def test_ispath(G):
1019
+ G.add_edges_from([(1, 2), (2, 3), (1, 2), (3, 4)])
1020
+ valid_path = [1, 2, 3, 4]
1021
+ invalid_path = [1, 2, 4, 3] # wrong node order
1022
+ another_invalid_path = [1, 2, 3, 4, 5] # contains node not in G
1023
+ assert nx.is_path(G, valid_path)
1024
+ assert not nx.is_path(G, invalid_path)
1025
+ assert not nx.is_path(G, another_invalid_path)
1026
+
1027
+
1028
+ @pytest.mark.parametrize("G", (nx.Graph(), nx.DiGraph()))
1029
+ def test_restricted_view(G):
1030
+ G.add_edges_from([(0, 1), (0, 2), (0, 3), (1, 0), (1, 1), (1, 2)])
1031
+ G.add_node(4)
1032
+ H = nx.restricted_view(G, [0, 2, 5], [(1, 2), (3, 4)])
1033
+ assert set(H.nodes()) == {1, 3, 4}
1034
+ assert set(H.edges()) == {(1, 1)}
1035
+
1036
+
1037
+ @pytest.mark.parametrize("G", (nx.MultiGraph(), nx.MultiDiGraph()))
1038
+ def test_restricted_view_multi(G):
1039
+ G.add_edges_from(
1040
+ [(0, 1, 0), (0, 2, 0), (0, 3, 0), (0, 1, 1), (1, 0, 0), (1, 1, 0), (1, 2, 0)]
1041
+ )
1042
+ G.add_node(4)
1043
+ H = nx.restricted_view(G, [0, 2, 5], [(1, 2, 0), (3, 4, 0)])
1044
+ assert set(H.nodes()) == {1, 3, 4}
1045
+ assert set(H.edges()) == {(1, 1)}