okstra 0.108.0 → 0.110.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (648) hide show
  1. package/README.kr.md +1 -1
  2. package/README.md +1 -1
  3. package/docs/kr/architecture.md +3 -3
  4. package/docs/kr/cli.md +2 -2
  5. package/docs/project-structure-overview.md +3 -3
  6. package/package.json +1 -1
  7. package/runtime/BUILD.json +2 -2
  8. package/runtime/prompts/profiles/_common-contract.md +1 -1
  9. package/runtime/python/okstra_ctl/graphify_cmd.py +225 -0
  10. package/runtime/python/okstra_ctl/resolve_task_key.py +15 -9
  11. package/runtime/python/okstra_ctl/worktree.py +14 -13
  12. package/runtime/python/okstra_project/__init__.py +2 -0
  13. package/runtime/python/okstra_project/state.py +36 -0
  14. package/runtime/python/okstra_vendor/__init__.py +41 -0
  15. package/runtime/python/okstra_vendor/graphify/.vendored-version +1 -0
  16. package/runtime/python/okstra_vendor/graphify/__init__.py +28 -0
  17. package/runtime/python/okstra_vendor/graphify/__main__.py +1371 -0
  18. package/runtime/python/okstra_vendor/graphify/analyze.py +540 -0
  19. package/runtime/python/okstra_vendor/graphify/benchmark.py +129 -0
  20. package/runtime/python/okstra_vendor/graphify/build.py +107 -0
  21. package/runtime/python/okstra_vendor/graphify/cache.py +169 -0
  22. package/runtime/python/okstra_vendor/graphify/cluster.py +137 -0
  23. package/runtime/python/okstra_vendor/graphify/detect.py +510 -0
  24. package/runtime/python/okstra_vendor/graphify/export.py +1014 -0
  25. package/runtime/python/okstra_vendor/graphify/extract.py +3277 -0
  26. package/runtime/python/okstra_vendor/graphify/hooks.py +220 -0
  27. package/runtime/python/okstra_vendor/graphify/ingest.py +297 -0
  28. package/runtime/python/okstra_vendor/graphify/manifest.py +4 -0
  29. package/runtime/python/okstra_vendor/graphify/report.py +175 -0
  30. package/runtime/python/okstra_vendor/graphify/security.py +203 -0
  31. package/runtime/python/okstra_vendor/graphify/serve.py +373 -0
  32. package/runtime/python/okstra_vendor/graphify/skill-aider.md +1184 -0
  33. package/runtime/python/okstra_vendor/graphify/skill-claw.md +1184 -0
  34. package/runtime/python/okstra_vendor/graphify/skill-codex.md +1242 -0
  35. package/runtime/python/okstra_vendor/graphify/skill-copilot.md +1268 -0
  36. package/runtime/python/okstra_vendor/graphify/skill-droid.md +1239 -0
  37. package/runtime/python/okstra_vendor/graphify/skill-kiro.md +1183 -0
  38. package/runtime/python/okstra_vendor/graphify/skill-opencode.md +1238 -0
  39. package/runtime/python/okstra_vendor/graphify/skill-trae.md +1208 -0
  40. package/runtime/python/okstra_vendor/graphify/skill-vscode.md +253 -0
  41. package/runtime/python/okstra_vendor/graphify/skill-windows.md +1245 -0
  42. package/runtime/python/okstra_vendor/graphify/skill.md +1319 -0
  43. package/runtime/python/okstra_vendor/graphify/transcribe.py +182 -0
  44. package/runtime/python/okstra_vendor/graphify/validate.py +72 -0
  45. package/runtime/python/okstra_vendor/graphify/watch.py +188 -0
  46. package/runtime/python/okstra_vendor/graphify/wiki.py +214 -0
  47. package/runtime/python/okstra_vendor/networkx/__init__.py +62 -0
  48. package/runtime/python/okstra_vendor/networkx/algorithms/__init__.py +134 -0
  49. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/__init__.py +26 -0
  50. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/clique.py +259 -0
  51. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/clustering_coefficient.py +71 -0
  52. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/connectivity.py +412 -0
  53. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/density.py +396 -0
  54. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/distance_measures.py +150 -0
  55. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/dominating_set.py +149 -0
  56. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/kcomponents.py +369 -0
  57. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/matching.py +44 -0
  58. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/maxcut.py +143 -0
  59. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/ramsey.py +53 -0
  60. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/steinertree.py +265 -0
  61. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/__init__.py +0 -0
  62. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_approx_clust_coeff.py +41 -0
  63. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_clique.py +112 -0
  64. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_connectivity.py +199 -0
  65. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_density.py +146 -0
  66. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_distance_measures.py +59 -0
  67. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_dominating_set.py +78 -0
  68. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_kcomponents.py +303 -0
  69. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_matching.py +8 -0
  70. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_maxcut.py +94 -0
  71. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_ramsey.py +31 -0
  72. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_steinertree.py +306 -0
  73. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_traveling_salesman.py +1014 -0
  74. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_treewidth.py +274 -0
  75. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_vertex_cover.py +68 -0
  76. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/traveling_salesman.py +1508 -0
  77. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/treewidth.py +255 -0
  78. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/vertex_cover.py +83 -0
  79. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/__init__.py +5 -0
  80. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/connectivity.py +122 -0
  81. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/correlation.py +302 -0
  82. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/mixing.py +255 -0
  83. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/neighbor_degree.py +160 -0
  84. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/pairs.py +127 -0
  85. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/__init__.py +0 -0
  86. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/base_test.py +81 -0
  87. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_connectivity.py +143 -0
  88. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_correlation.py +122 -0
  89. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_mixing.py +174 -0
  90. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_neighbor_degree.py +107 -0
  91. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_pairs.py +87 -0
  92. package/runtime/python/okstra_vendor/networkx/algorithms/asteroidal.py +164 -0
  93. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/__init__.py +88 -0
  94. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/basic.py +322 -0
  95. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/centrality.py +290 -0
  96. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/cluster.py +289 -0
  97. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/covering.py +57 -0
  98. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/edgelist.py +360 -0
  99. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/extendability.py +105 -0
  100. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/generators.py +603 -0
  101. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/link_analysis.py +316 -0
  102. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/matching.py +590 -0
  103. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/matrix.py +232 -0
  104. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/projection.py +526 -0
  105. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/redundancy.py +112 -0
  106. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/spectral.py +69 -0
  107. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/__init__.py +0 -0
  108. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_basic.py +125 -0
  109. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_centrality.py +192 -0
  110. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_cluster.py +84 -0
  111. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_covering.py +33 -0
  112. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_edgelist.py +240 -0
  113. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_extendability.py +334 -0
  114. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_generators.py +407 -0
  115. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_link_analysis.py +218 -0
  116. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matching.py +327 -0
  117. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matrix.py +138 -0
  118. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_project.py +409 -0
  119. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_redundancy.py +35 -0
  120. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_spectral_bipartivity.py +80 -0
  121. package/runtime/python/okstra_vendor/networkx/algorithms/boundary.py +168 -0
  122. package/runtime/python/okstra_vendor/networkx/algorithms/bridges.py +205 -0
  123. package/runtime/python/okstra_vendor/networkx/algorithms/broadcasting.py +164 -0
  124. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/__init__.py +20 -0
  125. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/betweenness.py +591 -0
  126. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/betweenness_subset.py +236 -0
  127. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/closeness.py +282 -0
  128. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_betweenness.py +364 -0
  129. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_betweenness_subset.py +227 -0
  130. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_closeness.py +96 -0
  131. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/degree_alg.py +150 -0
  132. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/dispersion.py +107 -0
  133. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/eigenvector.py +357 -0
  134. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/flow_matrix.py +130 -0
  135. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/group.py +787 -0
  136. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/harmonic.py +88 -0
  137. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/katz.py +331 -0
  138. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/laplacian.py +150 -0
  139. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/load.py +200 -0
  140. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/percolation.py +128 -0
  141. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/reaching.py +209 -0
  142. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/second_order.py +141 -0
  143. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/subgraph_alg.py +361 -0
  144. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/__init__.py +0 -0
  145. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality.py +923 -0
  146. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality_subset.py +354 -0
  147. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_closeness_centrality.py +274 -0
  148. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality.py +259 -0
  149. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality_subset.py +147 -0
  150. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_closeness.py +43 -0
  151. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_degree_centrality.py +144 -0
  152. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_dispersion.py +73 -0
  153. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_eigenvector_centrality.py +186 -0
  154. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_group.py +277 -0
  155. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_harmonic_centrality.py +122 -0
  156. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_katz_centrality.py +345 -0
  157. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_laplacian_centrality.py +220 -0
  158. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_load_centrality.py +344 -0
  159. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_percolation_centrality.py +87 -0
  160. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_reaching.py +140 -0
  161. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_second_order_centrality.py +82 -0
  162. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_subgraph.py +110 -0
  163. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_trophic.py +302 -0
  164. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_voterank.py +64 -0
  165. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/trophic.py +181 -0
  166. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/voterank_alg.py +95 -0
  167. package/runtime/python/okstra_vendor/networkx/algorithms/chains.py +172 -0
  168. package/runtime/python/okstra_vendor/networkx/algorithms/chordal.py +443 -0
  169. package/runtime/python/okstra_vendor/networkx/algorithms/clique.py +818 -0
  170. package/runtime/python/okstra_vendor/networkx/algorithms/cluster.py +732 -0
  171. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/__init__.py +4 -0
  172. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/equitable_coloring.py +505 -0
  173. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/greedy_coloring.py +565 -0
  174. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/__init__.py +0 -0
  175. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/test_coloring.py +863 -0
  176. package/runtime/python/okstra_vendor/networkx/algorithms/communicability_alg.py +163 -0
  177. package/runtime/python/okstra_vendor/networkx/algorithms/community/__init__.py +28 -0
  178. package/runtime/python/okstra_vendor/networkx/algorithms/community/asyn_fluid.py +153 -0
  179. package/runtime/python/okstra_vendor/networkx/algorithms/community/bipartitions.py +354 -0
  180. package/runtime/python/okstra_vendor/networkx/algorithms/community/centrality.py +171 -0
  181. package/runtime/python/okstra_vendor/networkx/algorithms/community/community_utils.py +30 -0
  182. package/runtime/python/okstra_vendor/networkx/algorithms/community/divisive.py +216 -0
  183. package/runtime/python/okstra_vendor/networkx/algorithms/community/kclique.py +79 -0
  184. package/runtime/python/okstra_vendor/networkx/algorithms/community/label_propagation.py +338 -0
  185. package/runtime/python/okstra_vendor/networkx/algorithms/community/leiden.py +162 -0
  186. package/runtime/python/okstra_vendor/networkx/algorithms/community/local.py +220 -0
  187. package/runtime/python/okstra_vendor/networkx/algorithms/community/louvain.py +384 -0
  188. package/runtime/python/okstra_vendor/networkx/algorithms/community/lukes.py +227 -0
  189. package/runtime/python/okstra_vendor/networkx/algorithms/community/modularity_max.py +452 -0
  190. package/runtime/python/okstra_vendor/networkx/algorithms/community/quality.py +347 -0
  191. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/__init__.py +0 -0
  192. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_asyn_fluid.py +147 -0
  193. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_bipartitions.py +157 -0
  194. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_centrality.py +85 -0
  195. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_divisive.py +106 -0
  196. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_kclique.py +91 -0
  197. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_label_propagation.py +241 -0
  198. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_leiden.py +138 -0
  199. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_local.py +76 -0
  200. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_louvain.py +264 -0
  201. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_lukes.py +152 -0
  202. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_modularity_max.py +340 -0
  203. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_quality.py +139 -0
  204. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_utils.py +26 -0
  205. package/runtime/python/okstra_vendor/networkx/algorithms/components/__init__.py +6 -0
  206. package/runtime/python/okstra_vendor/networkx/algorithms/components/attracting.py +115 -0
  207. package/runtime/python/okstra_vendor/networkx/algorithms/components/biconnected.py +394 -0
  208. package/runtime/python/okstra_vendor/networkx/algorithms/components/connected.py +282 -0
  209. package/runtime/python/okstra_vendor/networkx/algorithms/components/semiconnected.py +71 -0
  210. package/runtime/python/okstra_vendor/networkx/algorithms/components/strongly_connected.py +359 -0
  211. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/__init__.py +0 -0
  212. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_attracting.py +70 -0
  213. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_biconnected.py +248 -0
  214. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_connected.py +138 -0
  215. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_semiconnected.py +55 -0
  216. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_strongly_connected.py +193 -0
  217. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_weakly_connected.py +96 -0
  218. package/runtime/python/okstra_vendor/networkx/algorithms/components/weakly_connected.py +196 -0
  219. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/__init__.py +11 -0
  220. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/connectivity.py +811 -0
  221. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/cuts.py +616 -0
  222. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/disjoint_paths.py +408 -0
  223. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/edge_augmentation.py +1270 -0
  224. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/edge_kcomponents.py +592 -0
  225. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/kcomponents.py +220 -0
  226. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/kcutsets.py +235 -0
  227. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/stoerwagner.py +152 -0
  228. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/__init__.py +0 -0
  229. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_connectivity.py +421 -0
  230. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_cuts.py +309 -0
  231. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_disjoint_paths.py +249 -0
  232. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_augmentation.py +502 -0
  233. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_kcomponents.py +488 -0
  234. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcomponents.py +323 -0
  235. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcutsets.py +280 -0
  236. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_stoer_wagner.py +102 -0
  237. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/utils.py +88 -0
  238. package/runtime/python/okstra_vendor/networkx/algorithms/core.py +588 -0
  239. package/runtime/python/okstra_vendor/networkx/algorithms/covering.py +142 -0
  240. package/runtime/python/okstra_vendor/networkx/algorithms/cuts.py +416 -0
  241. package/runtime/python/okstra_vendor/networkx/algorithms/cycles.py +1234 -0
  242. package/runtime/python/okstra_vendor/networkx/algorithms/d_separation.py +677 -0
  243. package/runtime/python/okstra_vendor/networkx/algorithms/dag.py +1392 -0
  244. package/runtime/python/okstra_vendor/networkx/algorithms/distance_measures.py +1095 -0
  245. package/runtime/python/okstra_vendor/networkx/algorithms/distance_regular.py +272 -0
  246. package/runtime/python/okstra_vendor/networkx/algorithms/dominance.py +142 -0
  247. package/runtime/python/okstra_vendor/networkx/algorithms/dominating.py +268 -0
  248. package/runtime/python/okstra_vendor/networkx/algorithms/efficiency_measures.py +167 -0
  249. package/runtime/python/okstra_vendor/networkx/algorithms/euler.py +470 -0
  250. package/runtime/python/okstra_vendor/networkx/algorithms/flow/__init__.py +11 -0
  251. package/runtime/python/okstra_vendor/networkx/algorithms/flow/boykovkolmogorov.py +370 -0
  252. package/runtime/python/okstra_vendor/networkx/algorithms/flow/capacityscaling.py +407 -0
  253. package/runtime/python/okstra_vendor/networkx/algorithms/flow/dinitz_alg.py +238 -0
  254. package/runtime/python/okstra_vendor/networkx/algorithms/flow/edmondskarp.py +241 -0
  255. package/runtime/python/okstra_vendor/networkx/algorithms/flow/gomory_hu.py +178 -0
  256. package/runtime/python/okstra_vendor/networkx/algorithms/flow/maxflow.py +611 -0
  257. package/runtime/python/okstra_vendor/networkx/algorithms/flow/mincost.py +356 -0
  258. package/runtime/python/okstra_vendor/networkx/algorithms/flow/networksimplex.py +662 -0
  259. package/runtime/python/okstra_vendor/networkx/algorithms/flow/preflowpush.py +425 -0
  260. package/runtime/python/okstra_vendor/networkx/algorithms/flow/shortestaugmentingpath.py +300 -0
  261. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/__init__.py +0 -0
  262. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/gl1.gpickle.bz2 +0 -0
  263. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/gw1.gpickle.bz2 +0 -0
  264. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/netgen-2.gpickle.bz2 +0 -0
  265. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_gomory_hu.py +128 -0
  266. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_maxflow.py +573 -0
  267. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_maxflow_large_graph.py +155 -0
  268. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_mincost.py +475 -0
  269. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_networksimplex.py +481 -0
  270. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/wlm3.gpickle.bz2 +0 -0
  271. package/runtime/python/okstra_vendor/networkx/algorithms/flow/utils.py +194 -0
  272. package/runtime/python/okstra_vendor/networkx/algorithms/graph_hashing.py +435 -0
  273. package/runtime/python/okstra_vendor/networkx/algorithms/graphical.py +483 -0
  274. package/runtime/python/okstra_vendor/networkx/algorithms/hierarchy.py +57 -0
  275. package/runtime/python/okstra_vendor/networkx/algorithms/hybrid.py +196 -0
  276. package/runtime/python/okstra_vendor/networkx/algorithms/isolate.py +107 -0
  277. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/__init__.py +7 -0
  278. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/ismags.py +1306 -0
  279. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/isomorph.py +336 -0
  280. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/isomorphvf2.py +1262 -0
  281. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/matchhelpers.py +352 -0
  282. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/temporalisomorphvf2.py +308 -0
  283. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/__init__.py +0 -0
  284. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/iso_r01_s80.A99 +0 -0
  285. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/iso_r01_s80.B99 +0 -0
  286. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/si2_b06_m200.A99 +0 -0
  287. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/si2_b06_m200.B99 +0 -0
  288. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_ismags.py +719 -0
  289. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_isomorphism.py +103 -0
  290. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_isomorphvf2.py +490 -0
  291. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_match_helpers.py +64 -0
  292. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_temporalisomorphvf2.py +212 -0
  293. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_tree_isomorphism.py +202 -0
  294. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_vf2pp.py +1655 -0
  295. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_vf2pp_helpers.py +3118 -0
  296. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_vf2userfunc.py +196 -0
  297. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tree_isomorphism.py +264 -0
  298. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/vf2pp.py +1102 -0
  299. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/vf2userfunc.py +192 -0
  300. package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/__init__.py +2 -0
  301. package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/hits_alg.py +337 -0
  302. package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/pagerank_alg.py +498 -0
  303. package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/tests/__init__.py +0 -0
  304. package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/tests/test_hits.py +77 -0
  305. package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/tests/test_pagerank.py +213 -0
  306. package/runtime/python/okstra_vendor/networkx/algorithms/link_prediction.py +687 -0
  307. package/runtime/python/okstra_vendor/networkx/algorithms/lowest_common_ancestors.py +280 -0
  308. package/runtime/python/okstra_vendor/networkx/algorithms/matching.py +1148 -0
  309. package/runtime/python/okstra_vendor/networkx/algorithms/minors/__init__.py +27 -0
  310. package/runtime/python/okstra_vendor/networkx/algorithms/minors/contraction.py +738 -0
  311. package/runtime/python/okstra_vendor/networkx/algorithms/minors/tests/test_contraction.py +544 -0
  312. package/runtime/python/okstra_vendor/networkx/algorithms/mis.py +78 -0
  313. package/runtime/python/okstra_vendor/networkx/algorithms/moral.py +59 -0
  314. package/runtime/python/okstra_vendor/networkx/algorithms/node_classification.py +219 -0
  315. package/runtime/python/okstra_vendor/networkx/algorithms/non_randomness.py +155 -0
  316. package/runtime/python/okstra_vendor/networkx/algorithms/operators/__init__.py +4 -0
  317. package/runtime/python/okstra_vendor/networkx/algorithms/operators/all.py +324 -0
  318. package/runtime/python/okstra_vendor/networkx/algorithms/operators/binary.py +468 -0
  319. package/runtime/python/okstra_vendor/networkx/algorithms/operators/product.py +633 -0
  320. package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/__init__.py +0 -0
  321. package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_all.py +328 -0
  322. package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_binary.py +451 -0
  323. package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_product.py +491 -0
  324. package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_unary.py +55 -0
  325. package/runtime/python/okstra_vendor/networkx/algorithms/operators/unary.py +77 -0
  326. package/runtime/python/okstra_vendor/networkx/algorithms/perfect_graph.py +73 -0
  327. package/runtime/python/okstra_vendor/networkx/algorithms/planar_drawing.py +464 -0
  328. package/runtime/python/okstra_vendor/networkx/algorithms/planarity.py +1463 -0
  329. package/runtime/python/okstra_vendor/networkx/algorithms/polynomials.py +306 -0
  330. package/runtime/python/okstra_vendor/networkx/algorithms/reciprocity.py +98 -0
  331. package/runtime/python/okstra_vendor/networkx/algorithms/regular.py +167 -0
  332. package/runtime/python/okstra_vendor/networkx/algorithms/richclub.py +138 -0
  333. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/__init__.py +5 -0
  334. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/astar.py +239 -0
  335. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/dense.py +264 -0
  336. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/generic.py +716 -0
  337. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/__init__.py +0 -0
  338. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_astar.py +254 -0
  339. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_dense.py +212 -0
  340. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_dense_numpy.py +88 -0
  341. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_generic.py +511 -0
  342. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_unweighted.py +149 -0
  343. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_weighted.py +983 -0
  344. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/unweighted.py +625 -0
  345. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/weighted.py +2542 -0
  346. package/runtime/python/okstra_vendor/networkx/algorithms/similarity.py +2107 -0
  347. package/runtime/python/okstra_vendor/networkx/algorithms/simple_paths.py +966 -0
  348. package/runtime/python/okstra_vendor/networkx/algorithms/smallworld.py +404 -0
  349. package/runtime/python/okstra_vendor/networkx/algorithms/smetric.py +30 -0
  350. package/runtime/python/okstra_vendor/networkx/algorithms/sparsifiers.py +296 -0
  351. package/runtime/python/okstra_vendor/networkx/algorithms/structuralholes.py +374 -0
  352. package/runtime/python/okstra_vendor/networkx/algorithms/summarization.py +564 -0
  353. package/runtime/python/okstra_vendor/networkx/algorithms/swap.py +406 -0
  354. package/runtime/python/okstra_vendor/networkx/algorithms/tests/__init__.py +0 -0
  355. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_asteroidal.py +23 -0
  356. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_boundary.py +154 -0
  357. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_bridges.py +144 -0
  358. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_broadcasting.py +109 -0
  359. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_chains.py +136 -0
  360. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_chordal.py +129 -0
  361. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_clique.py +300 -0
  362. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_cluster.py +678 -0
  363. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_communicability.py +80 -0
  364. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_core.py +266 -0
  365. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_covering.py +85 -0
  366. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_cuts.py +171 -0
  367. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_cycles.py +984 -0
  368. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_d_separation.py +340 -0
  369. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_dag.py +835 -0
  370. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_distance_measures.py +831 -0
  371. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_distance_regular.py +85 -0
  372. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_dominance.py +299 -0
  373. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_dominating.py +115 -0
  374. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_efficiency.py +58 -0
  375. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_euler.py +314 -0
  376. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_graph_hashing.py +872 -0
  377. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_graphical.py +163 -0
  378. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_hierarchy.py +46 -0
  379. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_hybrid.py +24 -0
  380. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_isolate.py +26 -0
  381. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_link_prediction.py +615 -0
  382. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_lowest_common_ancestors.py +459 -0
  383. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_matching.py +556 -0
  384. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_max_weight_clique.py +179 -0
  385. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_mis.py +62 -0
  386. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_moral.py +15 -0
  387. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_node_classification.py +140 -0
  388. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_non_randomness.py +60 -0
  389. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_perfect_graph.py +27 -0
  390. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_planar_drawing.py +274 -0
  391. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_planarity.py +556 -0
  392. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_polynomials.py +57 -0
  393. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_reciprocity.py +37 -0
  394. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_regular.py +88 -0
  395. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_richclub.py +149 -0
  396. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_similarity.py +1158 -0
  397. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_simple_paths.py +803 -0
  398. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_smallworld.py +76 -0
  399. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_smetric.py +8 -0
  400. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_sparsifiers.py +138 -0
  401. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_structuralholes.py +191 -0
  402. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_summarization.py +642 -0
  403. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_swap.py +179 -0
  404. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_threshold.py +270 -0
  405. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_time_dependent.py +431 -0
  406. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_tournament.py +161 -0
  407. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_triads.py +248 -0
  408. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_vitality.py +41 -0
  409. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_voronoi.py +103 -0
  410. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_walks.py +54 -0
  411. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_wiener.py +157 -0
  412. package/runtime/python/okstra_vendor/networkx/algorithms/threshold.py +981 -0
  413. package/runtime/python/okstra_vendor/networkx/algorithms/time_dependent.py +142 -0
  414. package/runtime/python/okstra_vendor/networkx/algorithms/tournament.py +406 -0
  415. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/__init__.py +5 -0
  416. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/beamsearch.py +90 -0
  417. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/breadth_first_search.py +576 -0
  418. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/depth_first_search.py +529 -0
  419. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/edgebfs.py +185 -0
  420. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/edgedfs.py +182 -0
  421. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/__init__.py +0 -0
  422. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_beamsearch.py +25 -0
  423. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_bfs.py +203 -0
  424. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_dfs.py +307 -0
  425. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_edgebfs.py +147 -0
  426. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_edgedfs.py +131 -0
  427. package/runtime/python/okstra_vendor/networkx/algorithms/tree/__init__.py +7 -0
  428. package/runtime/python/okstra_vendor/networkx/algorithms/tree/branchings.py +1042 -0
  429. package/runtime/python/okstra_vendor/networkx/algorithms/tree/coding.py +413 -0
  430. package/runtime/python/okstra_vendor/networkx/algorithms/tree/decomposition.py +88 -0
  431. package/runtime/python/okstra_vendor/networkx/algorithms/tree/distance_measures.py +219 -0
  432. package/runtime/python/okstra_vendor/networkx/algorithms/tree/mst.py +1281 -0
  433. package/runtime/python/okstra_vendor/networkx/algorithms/tree/operations.py +106 -0
  434. package/runtime/python/okstra_vendor/networkx/algorithms/tree/recognition.py +273 -0
  435. package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/__init__.py +0 -0
  436. package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_branchings.py +624 -0
  437. package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_coding.py +114 -0
  438. package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_decomposition.py +79 -0
  439. package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_distance_measures.py +99 -0
  440. package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_mst.py +934 -0
  441. package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_operations.py +53 -0
  442. package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_recognition.py +174 -0
  443. package/runtime/python/okstra_vendor/networkx/algorithms/triads.py +500 -0
  444. package/runtime/python/okstra_vendor/networkx/algorithms/vitality.py +76 -0
  445. package/runtime/python/okstra_vendor/networkx/algorithms/voronoi.py +86 -0
  446. package/runtime/python/okstra_vendor/networkx/algorithms/walks.py +77 -0
  447. package/runtime/python/okstra_vendor/networkx/algorithms/wiener.py +278 -0
  448. package/runtime/python/okstra_vendor/networkx/classes/__init__.py +13 -0
  449. package/runtime/python/okstra_vendor/networkx/classes/coreviews.py +435 -0
  450. package/runtime/python/okstra_vendor/networkx/classes/digraph.py +1363 -0
  451. package/runtime/python/okstra_vendor/networkx/classes/filters.py +95 -0
  452. package/runtime/python/okstra_vendor/networkx/classes/function.py +1549 -0
  453. package/runtime/python/okstra_vendor/networkx/classes/graph.py +2082 -0
  454. package/runtime/python/okstra_vendor/networkx/classes/graphviews.py +269 -0
  455. package/runtime/python/okstra_vendor/networkx/classes/multidigraph.py +977 -0
  456. package/runtime/python/okstra_vendor/networkx/classes/multigraph.py +1294 -0
  457. package/runtime/python/okstra_vendor/networkx/classes/reportviews.py +1447 -0
  458. package/runtime/python/okstra_vendor/networkx/classes/tests/__init__.py +0 -0
  459. package/runtime/python/okstra_vendor/networkx/classes/tests/dispatch_interface.py +192 -0
  460. package/runtime/python/okstra_vendor/networkx/classes/tests/historical_tests.py +476 -0
  461. package/runtime/python/okstra_vendor/networkx/classes/tests/test_coreviews.py +362 -0
  462. package/runtime/python/okstra_vendor/networkx/classes/tests/test_digraph.py +331 -0
  463. package/runtime/python/okstra_vendor/networkx/classes/tests/test_digraph_historical.py +110 -0
  464. package/runtime/python/okstra_vendor/networkx/classes/tests/test_filters.py +177 -0
  465. package/runtime/python/okstra_vendor/networkx/classes/tests/test_function.py +1045 -0
  466. package/runtime/python/okstra_vendor/networkx/classes/tests/test_graph.py +950 -0
  467. package/runtime/python/okstra_vendor/networkx/classes/tests/test_graph_historical.py +12 -0
  468. package/runtime/python/okstra_vendor/networkx/classes/tests/test_graphviews.py +349 -0
  469. package/runtime/python/okstra_vendor/networkx/classes/tests/test_multidigraph.py +459 -0
  470. package/runtime/python/okstra_vendor/networkx/classes/tests/test_multigraph.py +528 -0
  471. package/runtime/python/okstra_vendor/networkx/classes/tests/test_reportviews.py +1421 -0
  472. package/runtime/python/okstra_vendor/networkx/classes/tests/test_special.py +131 -0
  473. package/runtime/python/okstra_vendor/networkx/classes/tests/test_subgraphviews.py +371 -0
  474. package/runtime/python/okstra_vendor/networkx/conftest.py +261 -0
  475. package/runtime/python/okstra_vendor/networkx/convert.py +502 -0
  476. package/runtime/python/okstra_vendor/networkx/convert_matrix.py +1314 -0
  477. package/runtime/python/okstra_vendor/networkx/drawing/__init__.py +7 -0
  478. package/runtime/python/okstra_vendor/networkx/drawing/layout.py +2036 -0
  479. package/runtime/python/okstra_vendor/networkx/drawing/nx_agraph.py +470 -0
  480. package/runtime/python/okstra_vendor/networkx/drawing/nx_latex.py +570 -0
  481. package/runtime/python/okstra_vendor/networkx/drawing/nx_pydot.py +361 -0
  482. package/runtime/python/okstra_vendor/networkx/drawing/nx_pylab.py +2978 -0
  483. package/runtime/python/okstra_vendor/networkx/drawing/tests/__init__.py +0 -0
  484. package/runtime/python/okstra_vendor/networkx/drawing/tests/baseline/test_display_complex.png +0 -0
  485. package/runtime/python/okstra_vendor/networkx/drawing/tests/baseline/test_display_empty_graph.png +0 -0
  486. package/runtime/python/okstra_vendor/networkx/drawing/tests/baseline/test_display_house_with_colors.png +0 -0
  487. package/runtime/python/okstra_vendor/networkx/drawing/tests/baseline/test_display_labels_and_colors.png +0 -0
  488. package/runtime/python/okstra_vendor/networkx/drawing/tests/baseline/test_display_shortest_path.png +0 -0
  489. package/runtime/python/okstra_vendor/networkx/drawing/tests/baseline/test_house_with_colors.png +0 -0
  490. package/runtime/python/okstra_vendor/networkx/drawing/tests/test_agraph.py +237 -0
  491. package/runtime/python/okstra_vendor/networkx/drawing/tests/test_image_comparison_pylab_mpl.py +229 -0
  492. package/runtime/python/okstra_vendor/networkx/drawing/tests/test_latex.py +285 -0
  493. package/runtime/python/okstra_vendor/networkx/drawing/tests/test_layout.py +631 -0
  494. package/runtime/python/okstra_vendor/networkx/drawing/tests/test_pydot.py +146 -0
  495. package/runtime/python/okstra_vendor/networkx/drawing/tests/test_pylab.py +1582 -0
  496. package/runtime/python/okstra_vendor/networkx/exception.py +131 -0
  497. package/runtime/python/okstra_vendor/networkx/generators/__init__.py +34 -0
  498. package/runtime/python/okstra_vendor/networkx/generators/atlas.dat.gz +0 -0
  499. package/runtime/python/okstra_vendor/networkx/generators/atlas.py +227 -0
  500. package/runtime/python/okstra_vendor/networkx/generators/classic.py +1091 -0
  501. package/runtime/python/okstra_vendor/networkx/generators/cographs.py +68 -0
  502. package/runtime/python/okstra_vendor/networkx/generators/community.py +1070 -0
  503. package/runtime/python/okstra_vendor/networkx/generators/degree_seq.py +886 -0
  504. package/runtime/python/okstra_vendor/networkx/generators/directed.py +572 -0
  505. package/runtime/python/okstra_vendor/networkx/generators/duplication.py +174 -0
  506. package/runtime/python/okstra_vendor/networkx/generators/ego.py +66 -0
  507. package/runtime/python/okstra_vendor/networkx/generators/expanders.py +499 -0
  508. package/runtime/python/okstra_vendor/networkx/generators/geometric.py +1037 -0
  509. package/runtime/python/okstra_vendor/networkx/generators/harary_graph.py +163 -0
  510. package/runtime/python/okstra_vendor/networkx/generators/internet_as_graphs.py +443 -0
  511. package/runtime/python/okstra_vendor/networkx/generators/intersection.py +125 -0
  512. package/runtime/python/okstra_vendor/networkx/generators/interval_graph.py +70 -0
  513. package/runtime/python/okstra_vendor/networkx/generators/joint_degree_seq.py +664 -0
  514. package/runtime/python/okstra_vendor/networkx/generators/lattice.py +405 -0
  515. package/runtime/python/okstra_vendor/networkx/generators/line.py +501 -0
  516. package/runtime/python/okstra_vendor/networkx/generators/mycielski.py +110 -0
  517. package/runtime/python/okstra_vendor/networkx/generators/nonisomorphic_trees.py +259 -0
  518. package/runtime/python/okstra_vendor/networkx/generators/random_clustered.py +117 -0
  519. package/runtime/python/okstra_vendor/networkx/generators/random_graphs.py +1416 -0
  520. package/runtime/python/okstra_vendor/networkx/generators/small.py +1070 -0
  521. package/runtime/python/okstra_vendor/networkx/generators/social.py +554 -0
  522. package/runtime/python/okstra_vendor/networkx/generators/spectral_graph_forge.py +120 -0
  523. package/runtime/python/okstra_vendor/networkx/generators/stochastic.py +54 -0
  524. package/runtime/python/okstra_vendor/networkx/generators/sudoku.py +131 -0
  525. package/runtime/python/okstra_vendor/networkx/generators/tests/__init__.py +0 -0
  526. package/runtime/python/okstra_vendor/networkx/generators/tests/test_atlas.py +75 -0
  527. package/runtime/python/okstra_vendor/networkx/generators/tests/test_classic.py +642 -0
  528. package/runtime/python/okstra_vendor/networkx/generators/tests/test_cographs.py +20 -0
  529. package/runtime/python/okstra_vendor/networkx/generators/tests/test_community.py +362 -0
  530. package/runtime/python/okstra_vendor/networkx/generators/tests/test_degree_seq.py +224 -0
  531. package/runtime/python/okstra_vendor/networkx/generators/tests/test_directed.py +189 -0
  532. package/runtime/python/okstra_vendor/networkx/generators/tests/test_duplication.py +103 -0
  533. package/runtime/python/okstra_vendor/networkx/generators/tests/test_ego.py +39 -0
  534. package/runtime/python/okstra_vendor/networkx/generators/tests/test_expanders.py +182 -0
  535. package/runtime/python/okstra_vendor/networkx/generators/tests/test_geometric.py +488 -0
  536. package/runtime/python/okstra_vendor/networkx/generators/tests/test_harary_graph.py +133 -0
  537. package/runtime/python/okstra_vendor/networkx/generators/tests/test_internet_as_graphs.py +221 -0
  538. package/runtime/python/okstra_vendor/networkx/generators/tests/test_intersection.py +28 -0
  539. package/runtime/python/okstra_vendor/networkx/generators/tests/test_interval_graph.py +144 -0
  540. package/runtime/python/okstra_vendor/networkx/generators/tests/test_joint_degree_seq.py +125 -0
  541. package/runtime/python/okstra_vendor/networkx/generators/tests/test_lattice.py +264 -0
  542. package/runtime/python/okstra_vendor/networkx/generators/tests/test_line.py +316 -0
  543. package/runtime/python/okstra_vendor/networkx/generators/tests/test_mycielski.py +30 -0
  544. package/runtime/python/okstra_vendor/networkx/generators/tests/test_nonisomorphic_trees.py +82 -0
  545. package/runtime/python/okstra_vendor/networkx/generators/tests/test_random_clustered.py +33 -0
  546. package/runtime/python/okstra_vendor/networkx/generators/tests/test_random_graphs.py +495 -0
  547. package/runtime/python/okstra_vendor/networkx/generators/tests/test_small.py +220 -0
  548. package/runtime/python/okstra_vendor/networkx/generators/tests/test_spectral_graph_forge.py +49 -0
  549. package/runtime/python/okstra_vendor/networkx/generators/tests/test_stochastic.py +72 -0
  550. package/runtime/python/okstra_vendor/networkx/generators/tests/test_sudoku.py +92 -0
  551. package/runtime/python/okstra_vendor/networkx/generators/tests/test_time_series.py +64 -0
  552. package/runtime/python/okstra_vendor/networkx/generators/tests/test_trees.py +195 -0
  553. package/runtime/python/okstra_vendor/networkx/generators/tests/test_triads.py +15 -0
  554. package/runtime/python/okstra_vendor/networkx/generators/time_series.py +74 -0
  555. package/runtime/python/okstra_vendor/networkx/generators/trees.py +1070 -0
  556. package/runtime/python/okstra_vendor/networkx/generators/triads.py +94 -0
  557. package/runtime/python/okstra_vendor/networkx/lazy_imports.py +188 -0
  558. package/runtime/python/okstra_vendor/networkx/linalg/__init__.py +13 -0
  559. package/runtime/python/okstra_vendor/networkx/linalg/algebraicconnectivity.py +650 -0
  560. package/runtime/python/okstra_vendor/networkx/linalg/attrmatrix.py +466 -0
  561. package/runtime/python/okstra_vendor/networkx/linalg/bethehessianmatrix.py +77 -0
  562. package/runtime/python/okstra_vendor/networkx/linalg/graphmatrix.py +168 -0
  563. package/runtime/python/okstra_vendor/networkx/linalg/laplacianmatrix.py +512 -0
  564. package/runtime/python/okstra_vendor/networkx/linalg/modularitymatrix.py +166 -0
  565. package/runtime/python/okstra_vendor/networkx/linalg/spectrum.py +186 -0
  566. package/runtime/python/okstra_vendor/networkx/linalg/tests/__init__.py +0 -0
  567. package/runtime/python/okstra_vendor/networkx/linalg/tests/test_algebraic_connectivity.py +400 -0
  568. package/runtime/python/okstra_vendor/networkx/linalg/tests/test_attrmatrix.py +108 -0
  569. package/runtime/python/okstra_vendor/networkx/linalg/tests/test_bethehessian.py +40 -0
  570. package/runtime/python/okstra_vendor/networkx/linalg/tests/test_graphmatrix.py +275 -0
  571. package/runtime/python/okstra_vendor/networkx/linalg/tests/test_laplacian.py +334 -0
  572. package/runtime/python/okstra_vendor/networkx/linalg/tests/test_modularity.py +86 -0
  573. package/runtime/python/okstra_vendor/networkx/linalg/tests/test_spectrum.py +70 -0
  574. package/runtime/python/okstra_vendor/networkx/readwrite/__init__.py +17 -0
  575. package/runtime/python/okstra_vendor/networkx/readwrite/adjlist.py +330 -0
  576. package/runtime/python/okstra_vendor/networkx/readwrite/edgelist.py +489 -0
  577. package/runtime/python/okstra_vendor/networkx/readwrite/gexf.py +1084 -0
  578. package/runtime/python/okstra_vendor/networkx/readwrite/gml.py +879 -0
  579. package/runtime/python/okstra_vendor/networkx/readwrite/graph6.py +427 -0
  580. package/runtime/python/okstra_vendor/networkx/readwrite/graphml.py +1053 -0
  581. package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/__init__.py +19 -0
  582. package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/adjacency.py +156 -0
  583. package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/cytoscape.py +190 -0
  584. package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/node_link.py +261 -0
  585. package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/__init__.py +0 -0
  586. package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_adjacency.py +78 -0
  587. package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_cytoscape.py +78 -0
  588. package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_node_link.py +109 -0
  589. package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_tree.py +48 -0
  590. package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tree.py +137 -0
  591. package/runtime/python/okstra_vendor/networkx/readwrite/leda.py +108 -0
  592. package/runtime/python/okstra_vendor/networkx/readwrite/multiline_adjlist.py +393 -0
  593. package/runtime/python/okstra_vendor/networkx/readwrite/p2g.py +113 -0
  594. package/runtime/python/okstra_vendor/networkx/readwrite/pajek.py +286 -0
  595. package/runtime/python/okstra_vendor/networkx/readwrite/sparse6.py +379 -0
  596. package/runtime/python/okstra_vendor/networkx/readwrite/tests/__init__.py +0 -0
  597. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_adjlist.py +354 -0
  598. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_edgelist.py +318 -0
  599. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_gexf.py +612 -0
  600. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_gml.py +744 -0
  601. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_graph6.py +181 -0
  602. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_graphml.py +1531 -0
  603. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_leda.py +30 -0
  604. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_p2g.py +63 -0
  605. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_pajek.py +128 -0
  606. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_sparse6.py +166 -0
  607. package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_text.py +1742 -0
  608. package/runtime/python/okstra_vendor/networkx/readwrite/text.py +851 -0
  609. package/runtime/python/okstra_vendor/networkx/relabel.py +285 -0
  610. package/runtime/python/okstra_vendor/networkx/tests/__init__.py +0 -0
  611. package/runtime/python/okstra_vendor/networkx/tests/test_all_random_functions.py +248 -0
  612. package/runtime/python/okstra_vendor/networkx/tests/test_convert.py +321 -0
  613. package/runtime/python/okstra_vendor/networkx/tests/test_convert_numpy.py +531 -0
  614. package/runtime/python/okstra_vendor/networkx/tests/test_convert_pandas.py +349 -0
  615. package/runtime/python/okstra_vendor/networkx/tests/test_convert_scipy.py +281 -0
  616. package/runtime/python/okstra_vendor/networkx/tests/test_exceptions.py +40 -0
  617. package/runtime/python/okstra_vendor/networkx/tests/test_import.py +11 -0
  618. package/runtime/python/okstra_vendor/networkx/tests/test_lazy_imports.py +96 -0
  619. package/runtime/python/okstra_vendor/networkx/tests/test_relabel.py +349 -0
  620. package/runtime/python/okstra_vendor/networkx/tests/test_removed_functions_exception_messages.py +8 -0
  621. package/runtime/python/okstra_vendor/networkx/utils/__init__.py +8 -0
  622. package/runtime/python/okstra_vendor/networkx/utils/backends.py +2171 -0
  623. package/runtime/python/okstra_vendor/networkx/utils/configs.py +396 -0
  624. package/runtime/python/okstra_vendor/networkx/utils/decorators.py +1233 -0
  625. package/runtime/python/okstra_vendor/networkx/utils/heaps.py +338 -0
  626. package/runtime/python/okstra_vendor/networkx/utils/mapped_queue.py +297 -0
  627. package/runtime/python/okstra_vendor/networkx/utils/misc.py +703 -0
  628. package/runtime/python/okstra_vendor/networkx/utils/random_sequence.py +198 -0
  629. package/runtime/python/okstra_vendor/networkx/utils/rcm.py +159 -0
  630. package/runtime/python/okstra_vendor/networkx/utils/tests/__init__.py +0 -0
  631. package/runtime/python/okstra_vendor/networkx/utils/tests/test__init.py +11 -0
  632. package/runtime/python/okstra_vendor/networkx/utils/tests/test_backends.py +225 -0
  633. package/runtime/python/okstra_vendor/networkx/utils/tests/test_config.py +263 -0
  634. package/runtime/python/okstra_vendor/networkx/utils/tests/test_decorators.py +510 -0
  635. package/runtime/python/okstra_vendor/networkx/utils/tests/test_heaps.py +131 -0
  636. package/runtime/python/okstra_vendor/networkx/utils/tests/test_mapped_queue.py +268 -0
  637. package/runtime/python/okstra_vendor/networkx/utils/tests/test_misc.py +393 -0
  638. package/runtime/python/okstra_vendor/networkx/utils/tests/test_random_sequence.py +53 -0
  639. package/runtime/python/okstra_vendor/networkx/utils/tests/test_rcm.py +63 -0
  640. package/runtime/python/okstra_vendor/networkx/utils/tests/test_unionfind.py +55 -0
  641. package/runtime/python/okstra_vendor/networkx/utils/union_find.py +106 -0
  642. package/runtime/skills/okstra-graphify/SKILL.md +161 -0
  643. package/runtime/skills/okstra-inspect/SKILL.md +17 -9
  644. package/runtime/templates/reports/settings.template.json +4 -0
  645. package/src/cli-registry.mjs +7 -0
  646. package/src/commands/graphify.mjs +32 -0
  647. package/src/commands/lifecycle/doctor.mjs +9 -0
  648. package/src/lib/skill-catalog.mjs +1 -0
@@ -0,0 +1,1549 @@
1
+ """Functional interface to graph methods and assorted utilities."""
2
+
3
+ from collections import Counter
4
+ from itertools import chain
5
+
6
+ import networkx as nx
7
+ from networkx.utils import not_implemented_for, pairwise
8
+
9
+ __all__ = [
10
+ "nodes",
11
+ "edges",
12
+ "degree",
13
+ "degree_histogram",
14
+ "neighbors",
15
+ "number_of_nodes",
16
+ "number_of_edges",
17
+ "density",
18
+ "is_directed",
19
+ "freeze",
20
+ "is_frozen",
21
+ "subgraph",
22
+ "induced_subgraph",
23
+ "edge_subgraph",
24
+ "restricted_view",
25
+ "to_directed",
26
+ "to_undirected",
27
+ "add_star",
28
+ "add_path",
29
+ "add_cycle",
30
+ "create_empty_copy",
31
+ "set_node_attributes",
32
+ "get_node_attributes",
33
+ "remove_node_attributes",
34
+ "set_edge_attributes",
35
+ "get_edge_attributes",
36
+ "remove_edge_attributes",
37
+ "all_neighbors",
38
+ "non_neighbors",
39
+ "non_edges",
40
+ "common_neighbors",
41
+ "is_weighted",
42
+ "is_negatively_weighted",
43
+ "is_empty",
44
+ "selfloop_edges",
45
+ "nodes_with_selfloops",
46
+ "number_of_selfloops",
47
+ "path_weight",
48
+ "is_path",
49
+ "describe",
50
+ ]
51
+
52
+
53
+ def nodes(G):
54
+ """Returns a NodeView over the graph nodes.
55
+
56
+ This function wraps the :func:`G.nodes <networkx.Graph.nodes>` property.
57
+ """
58
+ return G.nodes()
59
+
60
+
61
+ def edges(G, nbunch=None):
62
+ """Returns an edge view of edges incident to nodes in nbunch.
63
+
64
+ Return all edges if nbunch is unspecified or nbunch=None.
65
+
66
+ For digraphs, edges=out_edges
67
+
68
+ This function wraps the :func:`G.edges <networkx.Graph.edges>` property.
69
+ """
70
+ return G.edges(nbunch)
71
+
72
+
73
+ def degree(G, nbunch=None, weight=None):
74
+ """Returns a degree view of single node or of nbunch of nodes.
75
+ If nbunch is omitted, then return degrees of *all* nodes.
76
+
77
+ This function wraps the :func:`G.degree <networkx.Graph.degree>` property.
78
+ """
79
+ return G.degree(nbunch, weight)
80
+
81
+
82
+ def neighbors(G, n):
83
+ """Returns an iterator over all neighbors of node n.
84
+
85
+ This function wraps the :func:`G.neighbors <networkx.Graph.neighbors>` function.
86
+ """
87
+ return G.neighbors(n)
88
+
89
+
90
+ def number_of_nodes(G):
91
+ """Returns the number of nodes in the graph.
92
+
93
+ This function wraps the :func:`G.number_of_nodes <networkx.Graph.number_of_nodes>` function.
94
+ """
95
+ return G.number_of_nodes()
96
+
97
+
98
+ def number_of_edges(G):
99
+ """Returns the number of edges in the graph.
100
+
101
+ This function wraps the :func:`G.number_of_edges <networkx.Graph.number_of_edges>` function.
102
+ """
103
+ return G.number_of_edges()
104
+
105
+
106
+ def density(G):
107
+ r"""Returns the density of a graph.
108
+
109
+ The density for undirected graphs is
110
+
111
+ .. math::
112
+
113
+ d = \frac{2m}{n(n-1)},
114
+
115
+ and for directed graphs is
116
+
117
+ .. math::
118
+
119
+ d = \frac{m}{n(n-1)},
120
+
121
+ where `n` is the number of nodes and `m` is the number of edges in `G`.
122
+
123
+ Notes
124
+ -----
125
+ The density is 0 for a graph without edges and 1 for a complete graph.
126
+ The density of multigraphs can be higher than 1.
127
+
128
+ Self loops are counted in the total number of edges so graphs with self
129
+ loops can have density higher than 1.
130
+ """
131
+ n = number_of_nodes(G)
132
+ m = number_of_edges(G)
133
+ if m == 0 or n <= 1:
134
+ return 0
135
+ d = m / (n * (n - 1))
136
+ if not G.is_directed():
137
+ d *= 2
138
+ return d
139
+
140
+
141
+ def degree_histogram(G):
142
+ """Returns a list of the frequency of each degree value.
143
+
144
+ Parameters
145
+ ----------
146
+ G : Networkx graph
147
+ A graph
148
+
149
+ Returns
150
+ -------
151
+ hist : list
152
+ A list of frequencies of degrees.
153
+ The degree values are the index in the list.
154
+
155
+ Notes
156
+ -----
157
+ Note: the bins are width one, hence len(list) can be large
158
+ (Order(number_of_edges))
159
+ """
160
+ counts = Counter(d for n, d in G.degree())
161
+ return [counts.get(i, 0) for i in range(max(counts) + 1 if counts else 0)]
162
+
163
+
164
+ def is_directed(G):
165
+ """Return True if graph is directed."""
166
+ return G.is_directed()
167
+
168
+
169
+ def frozen(*args, **kwargs):
170
+ """Dummy method for raising errors when trying to modify frozen graphs"""
171
+ raise nx.NetworkXError("Frozen graph can't be modified")
172
+
173
+
174
+ def freeze(G):
175
+ """Modify graph to prevent further change by adding or removing
176
+ nodes or edges.
177
+
178
+ Node and edge data can still be modified.
179
+
180
+ Parameters
181
+ ----------
182
+ G : graph
183
+ A NetworkX graph
184
+
185
+ Examples
186
+ --------
187
+ >>> G = nx.path_graph(4)
188
+ >>> G = nx.freeze(G)
189
+ >>> try:
190
+ ... G.add_edge(4, 5)
191
+ ... except nx.NetworkXError as err:
192
+ ... print(str(err))
193
+ Frozen graph can't be modified
194
+
195
+ Notes
196
+ -----
197
+ To "unfreeze" a graph you must make a copy by creating a new graph object:
198
+
199
+ >>> graph = nx.path_graph(4)
200
+ >>> frozen_graph = nx.freeze(graph)
201
+ >>> unfrozen_graph = nx.Graph(frozen_graph)
202
+ >>> nx.is_frozen(unfrozen_graph)
203
+ False
204
+
205
+ See Also
206
+ --------
207
+ is_frozen
208
+ """
209
+ G.add_node = frozen
210
+ G.add_nodes_from = frozen
211
+ G.remove_node = frozen
212
+ G.remove_nodes_from = frozen
213
+ G.add_edge = frozen
214
+ G.add_edges_from = frozen
215
+ G.add_weighted_edges_from = frozen
216
+ G.remove_edge = frozen
217
+ G.remove_edges_from = frozen
218
+ G.clear = frozen
219
+ G.clear_edges = frozen
220
+ G.frozen = True
221
+ return G
222
+
223
+
224
+ def is_frozen(G):
225
+ """Returns True if graph is frozen.
226
+
227
+ Parameters
228
+ ----------
229
+ G : graph
230
+ A NetworkX graph
231
+
232
+ See Also
233
+ --------
234
+ freeze
235
+ """
236
+ try:
237
+ return G.frozen
238
+ except AttributeError:
239
+ return False
240
+
241
+
242
+ def add_star(G_to_add_to, nodes_for_star, **attr):
243
+ """Add a star to Graph G_to_add_to.
244
+
245
+ The first node in `nodes_for_star` is the middle of the star.
246
+ It is connected to all other nodes.
247
+
248
+ Parameters
249
+ ----------
250
+ G_to_add_to : graph
251
+ A NetworkX graph
252
+ nodes_for_star : iterable container
253
+ A container of nodes.
254
+ attr : keyword arguments, optional (default= no attributes)
255
+ Attributes to add to every edge in star.
256
+
257
+ See Also
258
+ --------
259
+ add_path, add_cycle
260
+
261
+ Examples
262
+ --------
263
+ >>> G = nx.Graph()
264
+ >>> nx.add_star(G, [0, 1, 2, 3])
265
+ >>> nx.add_star(G, [10, 11, 12], weight=2)
266
+ """
267
+ nlist = iter(nodes_for_star)
268
+ try:
269
+ v = next(nlist)
270
+ except StopIteration:
271
+ return
272
+ G_to_add_to.add_node(v)
273
+ edges = ((v, n) for n in nlist)
274
+ G_to_add_to.add_edges_from(edges, **attr)
275
+
276
+
277
+ def add_path(G_to_add_to, nodes_for_path, **attr):
278
+ """Add a path to the Graph G_to_add_to.
279
+
280
+ Parameters
281
+ ----------
282
+ G_to_add_to : graph
283
+ A NetworkX graph
284
+ nodes_for_path : iterable container
285
+ A container of nodes. A path will be constructed from
286
+ the nodes (in order) and added to the graph.
287
+ attr : keyword arguments, optional (default= no attributes)
288
+ Attributes to add to every edge in path.
289
+
290
+ See Also
291
+ --------
292
+ add_star, add_cycle
293
+
294
+ Examples
295
+ --------
296
+ >>> G = nx.Graph()
297
+ >>> nx.add_path(G, [0, 1, 2, 3])
298
+ >>> nx.add_path(G, [10, 11, 12], weight=7)
299
+ """
300
+ nlist = iter(nodes_for_path)
301
+ try:
302
+ first_node = next(nlist)
303
+ except StopIteration:
304
+ return
305
+ G_to_add_to.add_node(first_node)
306
+ G_to_add_to.add_edges_from(pairwise(chain((first_node,), nlist)), **attr)
307
+
308
+
309
+ def add_cycle(G_to_add_to, nodes_for_cycle, **attr):
310
+ """Add a cycle to the Graph G_to_add_to.
311
+
312
+ Parameters
313
+ ----------
314
+ G_to_add_to : graph
315
+ A NetworkX graph
316
+ nodes_for_cycle: iterable container
317
+ A container of nodes. A cycle will be constructed from
318
+ the nodes (in order) and added to the graph.
319
+ attr : keyword arguments, optional (default= no attributes)
320
+ Attributes to add to every edge in cycle.
321
+
322
+ See Also
323
+ --------
324
+ add_path, add_star
325
+
326
+ Examples
327
+ --------
328
+ >>> G = nx.Graph() # or DiGraph, MultiGraph, MultiDiGraph, etc
329
+ >>> nx.add_cycle(G, [0, 1, 2, 3])
330
+ >>> nx.add_cycle(G, [10, 11, 12], weight=7)
331
+ """
332
+ nlist = iter(nodes_for_cycle)
333
+ try:
334
+ first_node = next(nlist)
335
+ except StopIteration:
336
+ return
337
+ G_to_add_to.add_node(first_node)
338
+ G_to_add_to.add_edges_from(
339
+ pairwise(chain((first_node,), nlist), cyclic=True), **attr
340
+ )
341
+
342
+
343
+ def subgraph(G, nbunch):
344
+ """Returns the subgraph induced on nodes in nbunch.
345
+
346
+ Parameters
347
+ ----------
348
+ G : graph
349
+ A NetworkX graph
350
+
351
+ nbunch : list, iterable
352
+ A container of nodes that will be iterated through once (thus
353
+ it should be an iterator or be iterable). Each element of the
354
+ container should be a valid node type: any hashable type except
355
+ None. If nbunch is None, return all edges data in the graph.
356
+ Nodes in nbunch that are not in the graph will be (quietly)
357
+ ignored.
358
+
359
+ Notes
360
+ -----
361
+ subgraph(G) calls G.subgraph()
362
+ """
363
+ return G.subgraph(nbunch)
364
+
365
+
366
+ def induced_subgraph(G, nbunch):
367
+ """Returns a SubGraph view of `G` showing only nodes in nbunch.
368
+
369
+ The induced subgraph of a graph on a set of nodes N is the
370
+ graph with nodes N and edges from G which have both ends in N.
371
+
372
+ Parameters
373
+ ----------
374
+ G : NetworkX Graph
375
+ nbunch : node, container of nodes or None (for all nodes)
376
+
377
+ Returns
378
+ -------
379
+ subgraph : SubGraph View
380
+ A read-only view of the subgraph in `G` induced by the nodes.
381
+ Changes to the graph `G` will be reflected in the view.
382
+
383
+ Notes
384
+ -----
385
+ To create a mutable subgraph with its own copies of nodes
386
+ edges and attributes use `subgraph.copy()` or `Graph(subgraph)`
387
+
388
+ For an inplace reduction of a graph to a subgraph you can remove nodes:
389
+ `G.remove_nodes_from(n in G if n not in set(nbunch))`
390
+
391
+ If you are going to compute subgraphs of your subgraphs you could
392
+ end up with a chain of views that can be very slow once the chain
393
+ has about 15 views in it. If they are all induced subgraphs, you
394
+ can short-cut the chain by making them all subgraphs of the original
395
+ graph. The graph class method `G.subgraph` does this when `G` is
396
+ a subgraph. In contrast, this function allows you to choose to build
397
+ chains or not, as you wish. The returned subgraph is a view on `G`.
398
+
399
+ Examples
400
+ --------
401
+ >>> G = nx.path_graph(4) # or DiGraph, MultiGraph, MultiDiGraph, etc
402
+ >>> H = nx.induced_subgraph(G, [0, 1, 3])
403
+ >>> list(H.edges)
404
+ [(0, 1)]
405
+ >>> list(H.nodes)
406
+ [0, 1, 3]
407
+ """
408
+ induced_nodes = nx.filters.show_nodes(G.nbunch_iter(nbunch))
409
+ return nx.subgraph_view(G, filter_node=induced_nodes)
410
+
411
+
412
+ def edge_subgraph(G, edges):
413
+ """Returns a view of the subgraph induced by the specified edges.
414
+
415
+ The induced subgraph contains each edge in `edges` and each
416
+ node incident to any of those edges.
417
+
418
+ Parameters
419
+ ----------
420
+ G : NetworkX Graph
421
+ edges : iterable
422
+ An iterable of edges. Edges not present in `G` are ignored.
423
+
424
+ Returns
425
+ -------
426
+ subgraph : SubGraph View
427
+ A read-only edge-induced subgraph of `G`.
428
+ Changes to `G` are reflected in the view.
429
+
430
+ Notes
431
+ -----
432
+ To create a mutable subgraph with its own copies of nodes
433
+ edges and attributes use `subgraph.copy()` or `Graph(subgraph)`
434
+
435
+ If you create a subgraph of a subgraph recursively you can end up
436
+ with a chain of subgraphs that becomes very slow with about 15
437
+ nested subgraph views. Luckily the edge_subgraph filter nests
438
+ nicely so you can use the original graph as G in this function
439
+ to avoid chains. We do not rule out chains programmatically so
440
+ that odd cases like an `edge_subgraph` of a `restricted_view`
441
+ can be created.
442
+
443
+ Examples
444
+ --------
445
+ >>> G = nx.path_graph(5)
446
+ >>> H = G.edge_subgraph([(0, 1), (3, 4)])
447
+ >>> list(H.nodes)
448
+ [0, 1, 3, 4]
449
+ >>> list(H.edges)
450
+ [(0, 1), (3, 4)]
451
+ """
452
+ nxf = nx.filters
453
+ edges = set(edges)
454
+ nodes = set()
455
+ for e in edges:
456
+ nodes.update(e[:2])
457
+ induced_nodes = nxf.show_nodes(nodes)
458
+ if G.is_multigraph():
459
+ if G.is_directed():
460
+ induced_edges = nxf.show_multidiedges(edges)
461
+ else:
462
+ induced_edges = nxf.show_multiedges(edges)
463
+ else:
464
+ if G.is_directed():
465
+ induced_edges = nxf.show_diedges(edges)
466
+ else:
467
+ induced_edges = nxf.show_edges(edges)
468
+ return nx.subgraph_view(G, filter_node=induced_nodes, filter_edge=induced_edges)
469
+
470
+
471
+ def restricted_view(G, nodes, edges):
472
+ """Returns a view of `G` with hidden nodes and edges.
473
+
474
+ The resulting subgraph filters out node `nodes` and edges `edges`.
475
+ Filtered out nodes also filter out any of their edges.
476
+
477
+ Parameters
478
+ ----------
479
+ G : NetworkX Graph
480
+ nodes : iterable
481
+ An iterable of nodes. Nodes not present in `G` are ignored.
482
+ edges : iterable
483
+ An iterable of edges. Edges not present in `G` are ignored.
484
+
485
+ Returns
486
+ -------
487
+ subgraph : SubGraph View
488
+ A read-only restricted view of `G` filtering out nodes and edges.
489
+ Changes to `G` are reflected in the view.
490
+
491
+ Notes
492
+ -----
493
+ To create a mutable subgraph with its own copies of nodes
494
+ edges and attributes use `subgraph.copy()` or `Graph(subgraph)`
495
+
496
+ If you create a subgraph of a subgraph recursively you may end up
497
+ with a chain of subgraph views. Such chains can get quite slow
498
+ for lengths near 15. To avoid long chains, try to make your subgraph
499
+ based on the original graph. We do not rule out chains programmatically
500
+ so that odd cases like an `edge_subgraph` of a `restricted_view`
501
+ can be created.
502
+
503
+ Examples
504
+ --------
505
+ >>> G = nx.path_graph(5)
506
+ >>> H = nx.restricted_view(G, [0], [(1, 2), (3, 4)])
507
+ >>> list(H.nodes)
508
+ [1, 2, 3, 4]
509
+ >>> list(H.edges)
510
+ [(2, 3)]
511
+ """
512
+ nxf = nx.filters
513
+ hide_nodes = nxf.hide_nodes(nodes)
514
+ if G.is_multigraph():
515
+ if G.is_directed():
516
+ hide_edges = nxf.hide_multidiedges(edges)
517
+ else:
518
+ hide_edges = nxf.hide_multiedges(edges)
519
+ else:
520
+ if G.is_directed():
521
+ hide_edges = nxf.hide_diedges(edges)
522
+ else:
523
+ hide_edges = nxf.hide_edges(edges)
524
+ return nx.subgraph_view(G, filter_node=hide_nodes, filter_edge=hide_edges)
525
+
526
+
527
+ def to_directed(graph):
528
+ """Returns a directed view of the graph `graph`.
529
+
530
+ Identical to graph.to_directed(as_view=True)
531
+ Note that graph.to_directed defaults to `as_view=False`
532
+ while this function always provides a view.
533
+ """
534
+ return graph.to_directed(as_view=True)
535
+
536
+
537
+ def to_undirected(graph):
538
+ """Returns an undirected view of the graph `graph`.
539
+
540
+ Identical to graph.to_undirected(as_view=True)
541
+ Note that graph.to_undirected defaults to `as_view=False`
542
+ while this function always provides a view.
543
+ """
544
+ return graph.to_undirected(as_view=True)
545
+
546
+
547
+ def create_empty_copy(G, with_data=True):
548
+ """Returns a copy of the graph G with all of the edges removed.
549
+
550
+ Parameters
551
+ ----------
552
+ G : graph
553
+ A NetworkX graph
554
+
555
+ with_data : bool (default=True)
556
+ Propagate Graph and Nodes data to the new graph.
557
+
558
+ See Also
559
+ --------
560
+ empty_graph
561
+
562
+ """
563
+ H = G.__class__()
564
+ H.add_nodes_from(G.nodes(data=with_data))
565
+ if with_data:
566
+ H.graph.update(G.graph)
567
+ return H
568
+
569
+
570
+ @nx._dispatchable(preserve_node_attrs=True, mutates_input=True)
571
+ def set_node_attributes(G, values, name=None):
572
+ """Sets node attributes from a given value or dictionary of values.
573
+
574
+ .. Warning:: The call order of arguments `values` and `name`
575
+ switched between v1.x & v2.x.
576
+
577
+ Parameters
578
+ ----------
579
+ G : NetworkX Graph
580
+
581
+ values : scalar value, dict-like
582
+ What the node attribute should be set to. If `values` is
583
+ not a dictionary, then it is treated as a single attribute value
584
+ that is then applied to every node in `G`. This means that if
585
+ you provide a mutable object, like a list, updates to that object
586
+ will be reflected in the node attribute for every node.
587
+ The attribute name will be `name`.
588
+
589
+ If `values` is a dict or a dict of dict, it should be keyed
590
+ by node to either an attribute value or a dict of attribute key/value
591
+ pairs used to update the node's attributes.
592
+
593
+ name : string (optional, default=None)
594
+ Name of the node attribute to set if values is a scalar.
595
+
596
+ Examples
597
+ --------
598
+ After computing some property of the nodes of a graph, you may want
599
+ to assign a node attribute to store the value of that property for
600
+ each node::
601
+
602
+ >>> G = nx.path_graph(3)
603
+ >>> bb = nx.betweenness_centrality(G)
604
+ >>> isinstance(bb, dict)
605
+ True
606
+ >>> nx.set_node_attributes(G, bb, "betweenness")
607
+ >>> G.nodes[1]["betweenness"]
608
+ 1.0
609
+
610
+ If you provide a list as the second argument, updates to the list
611
+ will be reflected in the node attribute for each node::
612
+
613
+ >>> G = nx.path_graph(3)
614
+ >>> labels = []
615
+ >>> nx.set_node_attributes(G, labels, "labels")
616
+ >>> labels.append("foo")
617
+ >>> G.nodes[0]["labels"]
618
+ ['foo']
619
+ >>> G.nodes[1]["labels"]
620
+ ['foo']
621
+ >>> G.nodes[2]["labels"]
622
+ ['foo']
623
+
624
+ If you provide a dictionary of dictionaries as the second argument,
625
+ the outer dictionary is assumed to be keyed by node to an inner
626
+ dictionary of node attributes for that node::
627
+
628
+ >>> G = nx.path_graph(3)
629
+ >>> attrs = {0: {"attr1": 20, "attr2": "nothing"}, 1: {"attr2": 3}}
630
+ >>> nx.set_node_attributes(G, attrs)
631
+ >>> G.nodes[0]["attr1"]
632
+ 20
633
+ >>> G.nodes[0]["attr2"]
634
+ 'nothing'
635
+ >>> G.nodes[1]["attr2"]
636
+ 3
637
+ >>> G.nodes[2]
638
+ {}
639
+
640
+ Note that if the dictionary contains nodes that are not in `G`, the
641
+ values are silently ignored::
642
+
643
+ >>> G = nx.Graph()
644
+ >>> G.add_node(0)
645
+ >>> nx.set_node_attributes(G, {0: "red", 1: "blue"}, name="color")
646
+ >>> G.nodes[0]["color"]
647
+ 'red'
648
+ >>> 1 in G.nodes
649
+ False
650
+
651
+ """
652
+ # Set node attributes based on type of `values`
653
+ if name is not None: # `values` must not be a dict of dict
654
+ try: # `values` is a dict
655
+ for n, v in values.items():
656
+ try:
657
+ G.nodes[n][name] = values[n]
658
+ except KeyError:
659
+ pass
660
+ except AttributeError: # `values` is a constant
661
+ for n in G:
662
+ G.nodes[n][name] = values
663
+ else: # `values` must be dict of dict
664
+ for n, d in values.items():
665
+ try:
666
+ G.nodes[n].update(d)
667
+ except KeyError:
668
+ pass
669
+ nx._clear_cache(G)
670
+
671
+
672
+ @nx._dispatchable(node_attrs={"name": "default"})
673
+ def get_node_attributes(G, name, default=None):
674
+ """Get node attributes from graph
675
+
676
+ Parameters
677
+ ----------
678
+ G : NetworkX Graph
679
+
680
+ name : string
681
+ Attribute name
682
+
683
+ default: object (default=None)
684
+ Default value of the node attribute if there is no value set for that
685
+ node in graph. If `None` then nodes without this attribute are not
686
+ included in the returned dict.
687
+
688
+ Returns
689
+ -------
690
+ Dictionary of attributes keyed by node.
691
+
692
+ Examples
693
+ --------
694
+ >>> G = nx.Graph()
695
+ >>> G.add_nodes_from([1, 2, 3], color="red")
696
+ >>> color = nx.get_node_attributes(G, "color")
697
+ >>> color[1]
698
+ 'red'
699
+ >>> G.add_node(4)
700
+ >>> color = nx.get_node_attributes(G, "color", default="yellow")
701
+ >>> color[4]
702
+ 'yellow'
703
+ """
704
+ if default is not None:
705
+ return {n: d.get(name, default) for n, d in G.nodes.items()}
706
+ return {n: d[name] for n, d in G.nodes.items() if name in d}
707
+
708
+
709
+ @nx._dispatchable(preserve_node_attrs=True, mutates_input=True)
710
+ def remove_node_attributes(G, *attr_names, nbunch=None):
711
+ """Remove node attributes from all nodes in the graph.
712
+
713
+ Parameters
714
+ ----------
715
+ G : NetworkX Graph
716
+
717
+ *attr_names : List of Strings
718
+ The attribute names to remove from the graph.
719
+
720
+ nbunch : List of Nodes
721
+ Remove the node attributes only from the nodes in this list.
722
+
723
+ Examples
724
+ --------
725
+ >>> G = nx.Graph()
726
+ >>> G.add_nodes_from([1, 2, 3], color="blue")
727
+ >>> nx.get_node_attributes(G, "color")
728
+ {1: 'blue', 2: 'blue', 3: 'blue'}
729
+ >>> nx.remove_node_attributes(G, "color")
730
+ >>> nx.get_node_attributes(G, "color")
731
+ {}
732
+ """
733
+
734
+ if nbunch is None:
735
+ nbunch = G.nodes()
736
+
737
+ for attr in attr_names:
738
+ for n, d in G.nodes(data=True):
739
+ if n in nbunch:
740
+ try:
741
+ del d[attr]
742
+ except KeyError:
743
+ pass
744
+
745
+
746
+ @nx._dispatchable(preserve_edge_attrs=True, mutates_input=True)
747
+ def set_edge_attributes(G, values, name=None):
748
+ """Sets edge attributes from a given value or dictionary of values.
749
+
750
+ .. Warning:: The call order of arguments `values` and `name`
751
+ switched between v1.x & v2.x.
752
+
753
+ Parameters
754
+ ----------
755
+ G : NetworkX Graph
756
+
757
+ values : scalar value, dict-like
758
+ What the edge attribute should be set to. If `values` is
759
+ not a dictionary, then it is treated as a single attribute value
760
+ that is then applied to every edge in `G`. This means that if
761
+ you provide a mutable object, like a list, updates to that object
762
+ will be reflected in the edge attribute for each edge. The attribute
763
+ name will be `name`.
764
+
765
+ If `values` is a dict or a dict of dict, it should be keyed
766
+ by edge tuple to either an attribute value or a dict of attribute
767
+ key/value pairs used to update the edge's attributes.
768
+ For multigraphs, the edge tuples must be of the form ``(u, v, key)``,
769
+ where `u` and `v` are nodes and `key` is the edge key.
770
+ For non-multigraphs, the keys must be tuples of the form ``(u, v)``.
771
+
772
+ name : string (optional, default=None)
773
+ Name of the edge attribute to set if values is a scalar.
774
+
775
+ Examples
776
+ --------
777
+ After computing some property of the edges of a graph, you may want
778
+ to assign a edge attribute to store the value of that property for
779
+ each edge::
780
+
781
+ >>> G = nx.path_graph(3)
782
+ >>> bb = nx.edge_betweenness_centrality(G, normalized=False)
783
+ >>> nx.set_edge_attributes(G, bb, "betweenness")
784
+ >>> G.edges[1, 2]["betweenness"]
785
+ 2.0
786
+
787
+ If you provide a list as the second argument, updates to the list
788
+ will be reflected in the edge attribute for each edge::
789
+
790
+ >>> labels = []
791
+ >>> nx.set_edge_attributes(G, labels, "labels")
792
+ >>> labels.append("foo")
793
+ >>> G.edges[0, 1]["labels"]
794
+ ['foo']
795
+ >>> G.edges[1, 2]["labels"]
796
+ ['foo']
797
+
798
+ If you provide a dictionary of dictionaries as the second argument,
799
+ the entire dictionary will be used to update edge attributes::
800
+
801
+ >>> G = nx.path_graph(3)
802
+ >>> attrs = {(0, 1): {"attr1": 20, "attr2": "nothing"}, (1, 2): {"attr2": 3}}
803
+ >>> nx.set_edge_attributes(G, attrs)
804
+ >>> G[0][1]["attr1"]
805
+ 20
806
+ >>> G[0][1]["attr2"]
807
+ 'nothing'
808
+ >>> G[1][2]["attr2"]
809
+ 3
810
+
811
+ The attributes of one Graph can be used to set those of another.
812
+
813
+ >>> H = nx.path_graph(3)
814
+ >>> nx.set_edge_attributes(H, G.edges)
815
+
816
+ Note that if the dict contains edges that are not in `G`, they are
817
+ silently ignored::
818
+
819
+ >>> G = nx.Graph([(0, 1)])
820
+ >>> nx.set_edge_attributes(G, {(1, 2): {"weight": 2.0}})
821
+ >>> (1, 2) in G.edges()
822
+ False
823
+
824
+ For multigraphs, the `values` dict is expected to be keyed by 3-tuples
825
+ including the edge key::
826
+
827
+ >>> MG = nx.MultiGraph()
828
+ >>> edges = [(0, 1), (0, 1)]
829
+ >>> MG.add_edges_from(edges) # Returns list of edge keys
830
+ [0, 1]
831
+ >>> attributes = {(0, 1, 0): {"cost": 21}, (0, 1, 1): {"cost": 7}}
832
+ >>> nx.set_edge_attributes(MG, attributes)
833
+ >>> MG[0][1][0]["cost"]
834
+ 21
835
+ >>> MG[0][1][1]["cost"]
836
+ 7
837
+
838
+ If MultiGraph attributes are desired for a Graph, you must convert the 3-tuple
839
+ multiedge to a 2-tuple edge and the last multiedge's attribute value will
840
+ overwrite the previous values. Continuing from the previous case we get::
841
+
842
+ >>> H = nx.path_graph([0, 1, 2])
843
+ >>> nx.set_edge_attributes(H, {(u, v): ed for u, v, ed in MG.edges.data()})
844
+ >>> nx.get_edge_attributes(H, "cost")
845
+ {(0, 1): 7}
846
+
847
+ """
848
+ if name is not None:
849
+ # `values` does not contain attribute names
850
+ try:
851
+ # if `values` is a dict using `.items()` => {edge: value}
852
+ if G.is_multigraph():
853
+ for (u, v, key), value in values.items():
854
+ try:
855
+ G._adj[u][v][key][name] = value
856
+ except KeyError:
857
+ pass
858
+ else:
859
+ for (u, v), value in values.items():
860
+ try:
861
+ G._adj[u][v][name] = value
862
+ except KeyError:
863
+ pass
864
+ except AttributeError:
865
+ # treat `values` as a constant
866
+ for u, v, data in G.edges(data=True):
867
+ data[name] = values
868
+ else:
869
+ # `values` consists of doct-of-dict {edge: {attr: value}} shape
870
+ if G.is_multigraph():
871
+ for (u, v, key), d in values.items():
872
+ try:
873
+ G._adj[u][v][key].update(d)
874
+ except KeyError:
875
+ pass
876
+ else:
877
+ for (u, v), d in values.items():
878
+ try:
879
+ G._adj[u][v].update(d)
880
+ except KeyError:
881
+ pass
882
+ nx._clear_cache(G)
883
+
884
+
885
+ @nx._dispatchable(edge_attrs={"name": "default"})
886
+ def get_edge_attributes(G, name, default=None):
887
+ """Get edge attributes from graph
888
+
889
+ Parameters
890
+ ----------
891
+ G : NetworkX Graph
892
+
893
+ name : string
894
+ Attribute name
895
+
896
+ default: object (default=None)
897
+ Default value of the edge attribute if there is no value set for that
898
+ edge in graph. If `None` then edges without this attribute are not
899
+ included in the returned dict.
900
+
901
+ Returns
902
+ -------
903
+ Dictionary of attributes keyed by edge. For (di)graphs, the keys are
904
+ 2-tuples of the form: (u, v). For multi(di)graphs, the keys are 3-tuples of
905
+ the form: (u, v, key).
906
+
907
+ Examples
908
+ --------
909
+ >>> G = nx.Graph()
910
+ >>> nx.add_path(G, [1, 2, 3], color="red")
911
+ >>> color = nx.get_edge_attributes(G, "color")
912
+ >>> color[(1, 2)]
913
+ 'red'
914
+ >>> G.add_edge(3, 4)
915
+ >>> color = nx.get_edge_attributes(G, "color", default="yellow")
916
+ >>> color[(3, 4)]
917
+ 'yellow'
918
+ """
919
+ if G.is_multigraph():
920
+ edges = G.edges(keys=True, data=True)
921
+ else:
922
+ edges = G.edges(data=True)
923
+ if default is not None:
924
+ return {x[:-1]: x[-1].get(name, default) for x in edges}
925
+ return {x[:-1]: x[-1][name] for x in edges if name in x[-1]}
926
+
927
+
928
+ @nx._dispatchable(preserve_edge_attrs=True, mutates_input=True)
929
+ def remove_edge_attributes(G, *attr_names, ebunch=None):
930
+ """Remove edge attributes from all edges in the graph.
931
+
932
+ Parameters
933
+ ----------
934
+ G : NetworkX Graph
935
+
936
+ *attr_names : List of Strings
937
+ The attribute names to remove from the graph.
938
+
939
+ Examples
940
+ --------
941
+ >>> G = nx.path_graph(3)
942
+ >>> nx.set_edge_attributes(G, {(u, v): u + v for u, v in G.edges()}, name="weight")
943
+ >>> nx.get_edge_attributes(G, "weight")
944
+ {(0, 1): 1, (1, 2): 3}
945
+ >>> remove_edge_attributes(G, "weight")
946
+ >>> nx.get_edge_attributes(G, "weight")
947
+ {}
948
+ """
949
+ if ebunch is None:
950
+ ebunch = G.edges(keys=True) if G.is_multigraph() else G.edges()
951
+
952
+ for attr in attr_names:
953
+ edges = (
954
+ G.edges(keys=True, data=True) if G.is_multigraph() else G.edges(data=True)
955
+ )
956
+ for *e, d in edges:
957
+ if tuple(e) in ebunch:
958
+ try:
959
+ del d[attr]
960
+ except KeyError:
961
+ pass
962
+
963
+
964
+ def all_neighbors(graph, node):
965
+ """Returns all of the neighbors of a node in the graph.
966
+
967
+ If the graph is directed returns predecessors as well as successors.
968
+
969
+ Parameters
970
+ ----------
971
+ graph : NetworkX graph
972
+ Graph to find neighbors.
973
+ node : node
974
+ The node whose neighbors will be returned.
975
+
976
+ Returns
977
+ -------
978
+ neighbors : iterator
979
+ Iterator of neighbors
980
+
981
+ Raises
982
+ ------
983
+ NetworkXError
984
+ If `node` is not in the graph.
985
+
986
+ Examples
987
+ --------
988
+ For undirected graphs, this function is equivalent to ``G.neighbors(node)``.
989
+
990
+ >>> G = nx.path_graph(4) # or DiGraph, MultiGraph, MultiDiGraph, etc
991
+ >>> list(nx.all_neighbors(G, 1))
992
+ [0, 2]
993
+
994
+ For directed graphs, this function returns both predecessors and successors,
995
+ which may include duplicates if a node is both a predecessor and successor
996
+ (e.g., in bidirectional edges or self-loops).
997
+
998
+ >>> DG = nx.DiGraph([(0, 1), (1, 2), (2, 1)])
999
+ >>> list(nx.all_neighbors(DG, 1))
1000
+ [0, 2, 2]
1001
+
1002
+ Notes
1003
+ -----
1004
+ This function iterates over all neighbors (both predecessors and successors).
1005
+
1006
+ See Also
1007
+ --------
1008
+ Graph.neighbors : Returns successors for both Graph and DiGraph
1009
+ DiGraph.predecessors : Returns predecessors for directed graphs only
1010
+ DiGraph.successors : Returns successors for directed graphs only
1011
+ """
1012
+ if graph.is_directed():
1013
+ values = chain(graph.predecessors(node), graph.successors(node))
1014
+ else:
1015
+ values = graph.neighbors(node)
1016
+ return values
1017
+
1018
+
1019
+ def non_neighbors(graph, node):
1020
+ """Returns the non-neighbors of the node in the graph.
1021
+
1022
+ Parameters
1023
+ ----------
1024
+ graph : NetworkX graph
1025
+ Graph to find neighbors.
1026
+
1027
+ node : node
1028
+ The node whose neighbors will be returned.
1029
+
1030
+ Returns
1031
+ -------
1032
+ non_neighbors : set
1033
+ Set of nodes in the graph that are not neighbors of the node.
1034
+ """
1035
+ return graph._adj.keys() - graph._adj[node].keys() - {node}
1036
+
1037
+
1038
+ def non_edges(graph):
1039
+ """Returns the nonexistent edges in the graph.
1040
+
1041
+ Parameters
1042
+ ----------
1043
+ graph : NetworkX graph.
1044
+ Graph to find nonexistent edges.
1045
+
1046
+ Returns
1047
+ -------
1048
+ non_edges : iterator
1049
+ Iterator of edges that are not in the graph.
1050
+ """
1051
+ if graph.is_directed():
1052
+ for u in graph:
1053
+ for v in non_neighbors(graph, u):
1054
+ yield (u, v)
1055
+ else:
1056
+ nodes = set(graph)
1057
+ while nodes:
1058
+ u = nodes.pop()
1059
+ for v in nodes - set(graph[u]):
1060
+ yield (u, v)
1061
+
1062
+
1063
+ @not_implemented_for("directed")
1064
+ def common_neighbors(G, u, v):
1065
+ """Returns the common neighbors of two nodes in a graph.
1066
+
1067
+ Parameters
1068
+ ----------
1069
+ G : graph
1070
+ A NetworkX undirected graph.
1071
+
1072
+ u, v : nodes
1073
+ Nodes in the graph.
1074
+
1075
+ Returns
1076
+ -------
1077
+ cnbors : set
1078
+ Set of common neighbors of u and v in the graph.
1079
+
1080
+ Raises
1081
+ ------
1082
+ NetworkXError
1083
+ If u or v is not a node in the graph.
1084
+
1085
+ Examples
1086
+ --------
1087
+ >>> G = nx.complete_graph(5)
1088
+ >>> sorted(nx.common_neighbors(G, 0, 1))
1089
+ [2, 3, 4]
1090
+ """
1091
+ if u not in G:
1092
+ raise nx.NetworkXError("u is not in the graph.")
1093
+ if v not in G:
1094
+ raise nx.NetworkXError("v is not in the graph.")
1095
+
1096
+ return G._adj[u].keys() & G._adj[v].keys() - {u, v}
1097
+
1098
+
1099
+ @nx._dispatchable(preserve_edge_attrs=True)
1100
+ def is_weighted(G, edge=None, weight="weight"):
1101
+ """Returns True if `G` has weighted edges.
1102
+
1103
+ Parameters
1104
+ ----------
1105
+ G : graph
1106
+ A NetworkX graph.
1107
+
1108
+ edge : tuple, optional
1109
+ A 2-tuple specifying the only edge in `G` that will be tested. If
1110
+ None, then every edge in `G` is tested.
1111
+
1112
+ weight: string, optional
1113
+ The attribute name used to query for edge weights.
1114
+
1115
+ Returns
1116
+ -------
1117
+ bool
1118
+ A boolean signifying if `G`, or the specified edge, is weighted.
1119
+
1120
+ Raises
1121
+ ------
1122
+ NetworkXError
1123
+ If the specified edge does not exist.
1124
+
1125
+ Examples
1126
+ --------
1127
+ >>> G = nx.path_graph(4)
1128
+ >>> nx.is_weighted(G)
1129
+ False
1130
+ >>> nx.is_weighted(G, (2, 3))
1131
+ False
1132
+
1133
+ >>> G = nx.DiGraph()
1134
+ >>> G.add_edge(1, 2, weight=1)
1135
+ >>> nx.is_weighted(G)
1136
+ True
1137
+
1138
+ """
1139
+ if edge is not None:
1140
+ data = G.get_edge_data(*edge)
1141
+ if data is None:
1142
+ msg = f"Edge {edge!r} does not exist."
1143
+ raise nx.NetworkXError(msg)
1144
+ return weight in data
1145
+
1146
+ if is_empty(G):
1147
+ # Special handling required since: all([]) == True
1148
+ return False
1149
+
1150
+ return all(weight in data for u, v, data in G.edges(data=True))
1151
+
1152
+
1153
+ @nx._dispatchable(edge_attrs="weight")
1154
+ def is_negatively_weighted(G, edge=None, weight="weight"):
1155
+ """Returns True if `G` has negatively weighted edges.
1156
+
1157
+ Parameters
1158
+ ----------
1159
+ G : graph
1160
+ A NetworkX graph.
1161
+
1162
+ edge : tuple, optional
1163
+ A 2-tuple specifying the only edge in `G` that will be tested. If
1164
+ None, then every edge in `G` is tested.
1165
+
1166
+ weight: string, optional
1167
+ The attribute name used to query for edge weights.
1168
+
1169
+ Returns
1170
+ -------
1171
+ bool
1172
+ A boolean signifying if `G`, or the specified edge, is negatively
1173
+ weighted.
1174
+
1175
+ Raises
1176
+ ------
1177
+ NetworkXError
1178
+ If the specified edge does not exist.
1179
+
1180
+ Examples
1181
+ --------
1182
+ >>> G = nx.Graph()
1183
+ >>> G.add_edges_from([(1, 3), (2, 4), (2, 6)])
1184
+ >>> G.add_edge(1, 2, weight=4)
1185
+ >>> nx.is_negatively_weighted(G, (1, 2))
1186
+ False
1187
+ >>> G[2][4]["weight"] = -2
1188
+ >>> nx.is_negatively_weighted(G)
1189
+ True
1190
+ >>> G = nx.DiGraph()
1191
+ >>> edges = [("0", "3", 3), ("0", "1", -5), ("1", "0", -2)]
1192
+ >>> G.add_weighted_edges_from(edges)
1193
+ >>> nx.is_negatively_weighted(G)
1194
+ True
1195
+
1196
+ """
1197
+ if edge is not None:
1198
+ data = G.get_edge_data(*edge)
1199
+ if data is None:
1200
+ msg = f"Edge {edge!r} does not exist."
1201
+ raise nx.NetworkXError(msg)
1202
+ return weight in data and data[weight] < 0
1203
+
1204
+ return any(weight in data and data[weight] < 0 for u, v, data in G.edges(data=True))
1205
+
1206
+
1207
+ @nx._dispatchable
1208
+ def is_empty(G):
1209
+ """Returns True if `G` has no edges.
1210
+
1211
+ Parameters
1212
+ ----------
1213
+ G : graph
1214
+ A NetworkX graph.
1215
+
1216
+ Returns
1217
+ -------
1218
+ bool
1219
+ True if `G` has no edges, and False otherwise.
1220
+
1221
+ Notes
1222
+ -----
1223
+ An empty graph can have nodes but not edges. The empty graph with zero
1224
+ nodes is known as the null graph. This is an $O(n)$ operation where n
1225
+ is the number of nodes in the graph.
1226
+
1227
+ """
1228
+ return not any(G._adj.values())
1229
+
1230
+
1231
+ def nodes_with_selfloops(G):
1232
+ """Returns an iterator over nodes with self loops.
1233
+
1234
+ A node with a self loop has an edge with both ends adjacent
1235
+ to that node.
1236
+
1237
+ Returns
1238
+ -------
1239
+ nodelist : iterator
1240
+ A iterator over nodes with self loops.
1241
+
1242
+ See Also
1243
+ --------
1244
+ selfloop_edges, number_of_selfloops
1245
+
1246
+ Examples
1247
+ --------
1248
+ >>> G = nx.Graph() # or DiGraph, MultiGraph, MultiDiGraph, etc
1249
+ >>> G.add_edge(1, 1)
1250
+ >>> G.add_edge(1, 2)
1251
+ >>> list(nx.nodes_with_selfloops(G))
1252
+ [1]
1253
+
1254
+ """
1255
+ return (n for n, nbrs in G._adj.items() if n in nbrs)
1256
+
1257
+
1258
+ def selfloop_edges(G, data=False, keys=False, default=None):
1259
+ """Returns an iterator over selfloop edges.
1260
+
1261
+ A selfloop edge has the same node at both ends.
1262
+
1263
+ Parameters
1264
+ ----------
1265
+ G : graph
1266
+ A NetworkX graph.
1267
+ data : string or bool, optional (default=False)
1268
+ Return selfloop edges as two tuples (u, v) (data=False)
1269
+ or three-tuples (u, v, datadict) (data=True)
1270
+ or three-tuples (u, v, datavalue) (data='attrname')
1271
+ keys : bool, optional (default=False)
1272
+ If True, return edge keys with each edge.
1273
+ default : value, optional (default=None)
1274
+ Value used for edges that don't have the requested attribute.
1275
+ Only relevant if data is not True or False.
1276
+
1277
+ Returns
1278
+ -------
1279
+ edgeiter : iterator over edge tuples
1280
+ An iterator over all selfloop edges.
1281
+
1282
+ See Also
1283
+ --------
1284
+ nodes_with_selfloops, number_of_selfloops
1285
+
1286
+ Examples
1287
+ --------
1288
+ >>> G = nx.MultiGraph() # or Graph, DiGraph, MultiDiGraph, etc
1289
+ >>> ekey = G.add_edge(1, 1)
1290
+ >>> ekey = G.add_edge(1, 2)
1291
+ >>> list(nx.selfloop_edges(G))
1292
+ [(1, 1)]
1293
+ >>> list(nx.selfloop_edges(G, data=True))
1294
+ [(1, 1, {})]
1295
+ >>> list(nx.selfloop_edges(G, keys=True))
1296
+ [(1, 1, 0)]
1297
+ >>> list(nx.selfloop_edges(G, keys=True, data=True))
1298
+ [(1, 1, 0, {})]
1299
+ """
1300
+ if data is True:
1301
+ if G.is_multigraph():
1302
+ if keys is True:
1303
+ return (
1304
+ (n, n, k, d)
1305
+ for n, nbrs in G._adj.items()
1306
+ if n in nbrs
1307
+ for k, d in nbrs[n].items()
1308
+ )
1309
+ else:
1310
+ return (
1311
+ (n, n, d)
1312
+ for n, nbrs in G._adj.items()
1313
+ if n in nbrs
1314
+ for d in nbrs[n].values()
1315
+ )
1316
+ else:
1317
+ return ((n, n, nbrs[n]) for n, nbrs in G._adj.items() if n in nbrs)
1318
+ elif data is not False:
1319
+ if G.is_multigraph():
1320
+ if keys is True:
1321
+ return (
1322
+ (n, n, k, d.get(data, default))
1323
+ for n, nbrs in G._adj.items()
1324
+ if n in nbrs
1325
+ for k, d in nbrs[n].items()
1326
+ )
1327
+ else:
1328
+ return (
1329
+ (n, n, d.get(data, default))
1330
+ for n, nbrs in G._adj.items()
1331
+ if n in nbrs
1332
+ for d in nbrs[n].values()
1333
+ )
1334
+ else:
1335
+ return (
1336
+ (n, n, nbrs[n].get(data, default))
1337
+ for n, nbrs in G._adj.items()
1338
+ if n in nbrs
1339
+ )
1340
+ else:
1341
+ if G.is_multigraph():
1342
+ if keys is True:
1343
+ return (
1344
+ (n, n, k)
1345
+ for n, nbrs in G._adj.items()
1346
+ if n in nbrs
1347
+ for k in nbrs[n]
1348
+ )
1349
+ else:
1350
+ return (
1351
+ (n, n)
1352
+ for n, nbrs in G._adj.items()
1353
+ if n in nbrs
1354
+ for i in range(len(nbrs[n])) # for easy edge removal (#4068)
1355
+ )
1356
+ else:
1357
+ return ((n, n) for n, nbrs in G._adj.items() if n in nbrs)
1358
+
1359
+
1360
+ @nx._dispatchable
1361
+ def number_of_selfloops(G):
1362
+ """Returns the number of selfloop edges.
1363
+
1364
+ A selfloop edge has the same node at both ends.
1365
+
1366
+ Returns
1367
+ -------
1368
+ nloops : int
1369
+ The number of selfloops.
1370
+
1371
+ See Also
1372
+ --------
1373
+ nodes_with_selfloops, selfloop_edges
1374
+
1375
+ Examples
1376
+ --------
1377
+ >>> G = nx.Graph() # or DiGraph, MultiGraph, MultiDiGraph, etc
1378
+ >>> G.add_edge(1, 1)
1379
+ >>> G.add_edge(1, 2)
1380
+ >>> nx.number_of_selfloops(G)
1381
+ 1
1382
+ """
1383
+ return sum(1 for _ in nx.selfloop_edges(G))
1384
+
1385
+
1386
+ def is_path(G, path):
1387
+ """Returns whether or not the specified path exists.
1388
+
1389
+ For it to return True, every node on the path must exist and
1390
+ each consecutive pair must be connected via one or more edges.
1391
+
1392
+ Parameters
1393
+ ----------
1394
+ G : graph
1395
+ A NetworkX graph.
1396
+
1397
+ path : list
1398
+ A list of nodes which defines the path to traverse
1399
+
1400
+ Returns
1401
+ -------
1402
+ bool
1403
+ True if `path` is a valid path in `G`
1404
+
1405
+ """
1406
+ try:
1407
+ return all(nbr in G._adj[node] for node, nbr in nx.utils.pairwise(path))
1408
+ except (KeyError, TypeError):
1409
+ return False
1410
+
1411
+
1412
+ def path_weight(G, path, weight):
1413
+ """Returns total cost associated with specified path and weight
1414
+
1415
+ Parameters
1416
+ ----------
1417
+ G : graph
1418
+ A NetworkX graph.
1419
+
1420
+ path: list
1421
+ A list of node labels which defines the path to traverse
1422
+
1423
+ weight: string
1424
+ A string indicating which edge attribute to use for path cost
1425
+
1426
+ Returns
1427
+ -------
1428
+ cost: int or float
1429
+ An integer or a float representing the total cost with respect to the
1430
+ specified weight of the specified path
1431
+
1432
+ Raises
1433
+ ------
1434
+ NetworkXNoPath
1435
+ If the specified edge does not exist.
1436
+ """
1437
+ multigraph = G.is_multigraph()
1438
+ cost = 0
1439
+
1440
+ if not nx.is_path(G, path):
1441
+ raise nx.NetworkXNoPath("path does not exist")
1442
+ for node, nbr in nx.utils.pairwise(path):
1443
+ if multigraph:
1444
+ cost += min(v[weight] for v in G._adj[node][nbr].values())
1445
+ else:
1446
+ cost += G._adj[node][nbr][weight]
1447
+ return cost
1448
+
1449
+
1450
+ def describe(G, describe_hook=None):
1451
+ """Prints a description of the graph G.
1452
+
1453
+ By default, the description includes some basic properties of the graph.
1454
+ You can also provide additional functions to compute and include
1455
+ more properties in the description.
1456
+
1457
+ Parameters
1458
+ ----------
1459
+ G : graph
1460
+ A NetworkX graph.
1461
+
1462
+ describe_hook: callable, optional (default=None)
1463
+ A function that takes a graph as input and returns a
1464
+ dictionary of additional properties to include in the description.
1465
+ The keys of the dictionary are the property names, and the values
1466
+ are the corresponding property values.
1467
+
1468
+ Examples
1469
+ --------
1470
+ >>> G = nx.path_graph(5)
1471
+ >>> nx.describe(G)
1472
+ Number of nodes : 5
1473
+ Number of edges : 4
1474
+ Directed : False
1475
+ Multigraph : False
1476
+ Tree : True
1477
+ Bipartite : True
1478
+ Average degree (min, max) : 1.60 (1, 2)
1479
+ Number of connected components : 1
1480
+
1481
+ >>> def augment_description(G):
1482
+ ... return {"Average Shortest Path Length": nx.average_shortest_path_length(G)}
1483
+ >>> nx.describe(G, describe_hook=augment_description)
1484
+ Number of nodes : 5
1485
+ Number of edges : 4
1486
+ Directed : False
1487
+ Multigraph : False
1488
+ Tree : True
1489
+ Bipartite : True
1490
+ Average degree (min, max) : 1.60 (1, 2)
1491
+ Number of connected components : 1
1492
+ Average Shortest Path Length : 2.0
1493
+
1494
+ >>> G.name = "Path Graph of 5 nodes"
1495
+ >>> nx.describe(G)
1496
+ Name of Graph : Path Graph of 5 nodes
1497
+ Number of nodes : 5
1498
+ Number of edges : 4
1499
+ Directed : False
1500
+ Multigraph : False
1501
+ Tree : True
1502
+ Bipartite : True
1503
+ Average degree (min, max) : 1.60 (1, 2)
1504
+ Number of connected components : 1
1505
+
1506
+ """
1507
+ info_dict = _create_describe_info_dict(G)
1508
+
1509
+ if describe_hook is not None:
1510
+ additional_info = describe_hook(G)
1511
+ info_dict.update(additional_info)
1512
+
1513
+ max_key_len = max(len(k) for k in info_dict)
1514
+ for key, val in info_dict.items():
1515
+ print(f"{key:<{max_key_len}} : {val}")
1516
+
1517
+
1518
+ def _create_describe_info_dict(G):
1519
+ info = {}
1520
+ if G.name != "":
1521
+ info["Name of Graph"] = G.name
1522
+ info.update(
1523
+ {
1524
+ "Number of nodes": len(G),
1525
+ "Number of edges": G.number_of_edges(),
1526
+ "Directed": G.is_directed(),
1527
+ "Multigraph": G.is_multigraph(),
1528
+ "Tree": nx.is_tree(G),
1529
+ "Bipartite": nx.is_bipartite(G),
1530
+ }
1531
+ )
1532
+ if len(G) == 0:
1533
+ return info
1534
+
1535
+ degree_values = dict(nx.degree(G)).values()
1536
+ avg_degree = sum(degree_values) / len(G)
1537
+ max_degree, min_degree = max(degree_values), min(degree_values)
1538
+ info["Average degree (min, max)"] = f"{avg_degree:.2f} ({min_degree}, {max_degree})"
1539
+
1540
+ if G.is_directed():
1541
+ info["Number of strongly connected components"] = (
1542
+ nx.number_strongly_connected_components(G)
1543
+ )
1544
+ info["Number of weakly connected components"] = (
1545
+ nx.number_weakly_connected_components(G)
1546
+ )
1547
+ else:
1548
+ info["Number of connected components"] = nx.number_connected_components(G)
1549
+ return info