molstar 2.3.9 → 2.4.0

package/lib/extensions/rcsb/graphql/types.d.ts

@@ -1,4 +1,5 @@
 export declare type Maybe<T> = T | null;
+export declare type InputMaybe<T> = Maybe<T>;
 export declare type Exact<T extends {
     [key: string]: unknown;
 }> = {
@@ -6653,7 +6654,7 @@ export declare type Query = {
 };
 /** Query root */
 export declare type QueryAssembliesArgs = {
-    assembly_ids: ReadonlyArray<Maybe<Scalars['String']>>;
+    assembly_ids: ReadonlyArray<InputMaybe<Scalars['String']>>;
 };
 /** Query root */
 export declare type QueryAssemblyArgs = {
@@ -6676,7 +6677,7 @@ export declare type QueryBranched_Entity_InstanceArgs = {
 };
 /** Query root */
 export declare type QueryBranched_Entity_InstancesArgs = {
-    instance_ids: ReadonlyArray<Maybe<Scalars['String']>>;
+    instance_ids: ReadonlyArray<InputMaybe<Scalars['String']>>;
 };
 /** Query root */
 export declare type QueryChem_CompArgs = {
@@ -6684,7 +6685,7 @@ export declare type QueryChem_CompArgs = {
 };
 /** Query root */
 export declare type QueryChem_CompsArgs = {
-    comp_ids: ReadonlyArray<Maybe<Scalars['String']>>;
+    comp_ids: ReadonlyArray<InputMaybe<Scalars['String']>>;
 };
 /** Query root */
 export declare type QueryEntriesArgs = {
@@ -6710,7 +6711,7 @@ export declare type QueryNonpolymer_Entity_InstanceArgs = {
 };
 /** Query root */
 export declare type QueryNonpolymer_Entity_InstancesArgs = {
-    instance_ids: ReadonlyArray<Maybe<Scalars['String']>>;
+    instance_ids: ReadonlyArray<InputMaybe<Scalars['String']>>;
 };
 /** Query root */
 export declare type QueryPolymer_EntitiesArgs = {
@@ -6728,7 +6729,7 @@ export declare type QueryPolymer_Entity_InstanceArgs = {
 };
 /** Query root */
 export declare type QueryPolymer_Entity_InstancesArgs = {
-    instance_ids: ReadonlyArray<Maybe<Scalars['String']>>;
+    instance_ids: ReadonlyArray<InputMaybe<Scalars['String']>>;
 };
 /** Query root */
 export declare type QueryPubmedArgs = {
@@ -12849,25 +12850,25 @@ export declare type AssemblySymmetryQueryVariables = Exact<{
     entry_id: Scalars['String'];
 }>;
 export declare type AssemblySymmetryQuery = {
-    readonly assembly?: Maybe<{
-        readonly rcsb_struct_symmetry?: Maybe<ReadonlyArray<Maybe<{
+    readonly assembly?: {
+        readonly rcsb_struct_symmetry?: ReadonlyArray<{
             readonly kind: string;
             readonly oligomeric_state: string;
-            readonly stoichiometry: ReadonlyArray<Maybe<string>>;
+            readonly stoichiometry: ReadonlyArray<string | null | undefined>;
             readonly symbol: string;
             readonly type: string;
-            readonly clusters: ReadonlyArray<Maybe<{
-                readonly avg_rmsd?: Maybe<number>;
-                readonly members: ReadonlyArray<Maybe<{
+            readonly clusters: ReadonlyArray<{
+                readonly avg_rmsd?: number | null | undefined;
+                readonly members: ReadonlyArray<{
                     readonly asym_id: string;
-                    readonly pdbx_struct_oper_list_ids?: Maybe<ReadonlyArray<Maybe<string>>>;
-                }>>;
-            }>>;
-            readonly rotation_axes?: Maybe<ReadonlyArray<Maybe<{
-                readonly order?: Maybe<number>;
-                readonly start: ReadonlyArray<Maybe<number>>;
-                readonly end: ReadonlyArray<Maybe<number>>;
-            }>>>;
-        }>>>;
-    }>;
+                    readonly pdbx_struct_oper_list_ids?: ReadonlyArray<string | null | undefined> | null | undefined;
+                } | null | undefined>;
+            } | null | undefined>;
+            readonly rotation_axes?: ReadonlyArray<{
+                readonly order?: number | null | undefined;
+                readonly start: ReadonlyArray<number | null | undefined>;
+                readonly end: ReadonlyArray<number | null | undefined>;
+            } | null | undefined> | null | undefined;
+        } | null | undefined> | null | undefined;
+    } | null | undefined;
 };

package/lib/extensions/rcsb/validation-report/representation.d.ts

@@ -24,7 +24,7 @@ export declare const IntraUnitClashParams: {
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
-    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -49,7 +49,7 @@ export declare const InterUnitClashParams: {
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
-    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -62,7 +62,7 @@ export declare const InterUnitClashParams: {
 export declare type InterUnitClashParams = typeof InterUnitClashParams;
 export declare function InterUnitClashVisual(materialId: number): ComplexVisual<InterUnitClashParams>;
 export declare const ClashesParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     visuals: PD.MultiSelect<"intra-clash" | "inter-clash">;
     linkCap: PD.BooleanParam;
     sizeFactor: PD.Numeric;
@@ -87,7 +87,7 @@ export declare const ClashesParams: {
 };
 export declare type ClashesParams = typeof ClashesParams;
 export declare function getClashesParams(ctx: ThemeRegistryContext, structure: Structure): {
-    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     visuals: PD.MultiSelect<"intra-clash" | "inter-clash">;
     linkCap: PD.BooleanParam;
     sizeFactor: PD.Numeric;
@@ -113,7 +113,7 @@ export declare function getClashesParams(ctx: ThemeRegistryContext, structure: S
 export declare type ClashesRepresentation = StructureRepresentation<ClashesParams>;
 export declare function ClashesRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, ClashesParams>): ClashesRepresentation;
 export declare const ClashesRepresentationProvider: StructureRepresentationProvider<{
-    unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     visuals: PD.MultiSelect<"intra-clash" | "inter-clash">;
     linkCap: PD.BooleanParam;
     sizeFactor: PD.Numeric;

package/lib/mol-canvas3d/canvas3d.d.ts

@@ -98,13 +98,13 @@ export declare const Canvas3DParams: {
         selectStrength: number;
         markerPriority: number;
         xrayEdgeFalloff: number;
-        style: PD.NamedParams<PD.Normalize<{
+        style: PD.NamedParams<PD.Normalize<unknown>, "metallic"> | PD.NamedParams<PD.Normalize<{
             lightIntensity: any;
             ambientIntensity: any;
             metalness: any;
             roughness: any;
             reflectivity: any;
-        }>, "custom"> | PD.NamedParams<PD.Normalize<unknown>, "matte"> | PD.NamedParams<PD.Normalize<unknown>, "flat"> | PD.NamedParams<PD.Normalize<unknown>, "glossy"> | PD.NamedParams<PD.Normalize<unknown>, "metallic"> | PD.NamedParams<PD.Normalize<unknown>, "plastic">;
+        }>, "custom"> | PD.NamedParams<PD.Normalize<unknown>, "matte"> | PD.NamedParams<PD.Normalize<unknown>, "flat"> | PD.NamedParams<PD.Normalize<unknown>, "glossy"> | PD.NamedParams<PD.Normalize<unknown>, "plastic">;
         clip: PD.Normalize<{
             variant: any;
             objects: any;
@@ -244,13 +244,13 @@ export declare const DefaultCanvas3DParams: PD.Values<{
         selectStrength: number;
         markerPriority: number;
         xrayEdgeFalloff: number;
-        style: PD.NamedParams<PD.Normalize<{
+        style: PD.NamedParams<PD.Normalize<unknown>, "metallic"> | PD.NamedParams<PD.Normalize<{
             lightIntensity: any;
             ambientIntensity: any;
             metalness: any;
             roughness: any;
             reflectivity: any;
-        }>, "custom"> | PD.NamedParams<PD.Normalize<unknown>, "matte"> | PD.NamedParams<PD.Normalize<unknown>, "flat"> | PD.NamedParams<PD.Normalize<unknown>, "glossy"> | PD.NamedParams<PD.Normalize<unknown>, "metallic"> | PD.NamedParams<PD.Normalize<unknown>, "plastic">;
+        }>, "custom"> | PD.NamedParams<PD.Normalize<unknown>, "matte"> | PD.NamedParams<PD.Normalize<unknown>, "flat"> | PD.NamedParams<PD.Normalize<unknown>, "glossy"> | PD.NamedParams<PD.Normalize<unknown>, "plastic">;
         clip: PD.Normalize<{
             variant: any;
             objects: any;

package/lib/mol-canvas3d/helper/camera-helper.d.ts

@@ -11,7 +11,7 @@ import { MarkerAction } from '../../mol-util/marker-action';
 import { ParamDefinition as PD } from '../../mol-util/param-definition';
 import { Camera, ICamera } from '../camera';
 export declare const CameraHelperParams: {
-    axes: PD.Mapped<PD.NamedParams<PD.Normalize<{
+    axes: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
         alpha: number;
         ignoreLight: boolean;
         colorX: import("../../mol-util/color").Color;
@@ -23,7 +23,7 @@ export declare const CameraHelperParams: {
         flatShaded: boolean;
         xrayShaded: boolean;
         quality: "custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest";
-    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
+    }>, "on">>;
 };
 export declare type CameraHelperParams = typeof CameraHelperParams;
 export declare type CameraHelperProps = PD.Values<CameraHelperParams>;

package/lib/mol-canvas3d/passes/draw.js

@@ -15,11 +15,11 @@ import { ValueCell } from '../../mol-util';
 import { Vec2 } from '../../mol-math/linear-algebra';
 import { quad_vert } from '../../mol-gl/shader/quad.vert';
 import { depthMerge_frag } from '../../mol-gl/shader/depth-merge.frag';
-import { copy_frag } from '../../mol-gl/shader/copy.frag';
 import { StereoCamera } from '../camera/stereo';
 import { WboitPass } from './wboit';
 import { AntialiasingPass, PostprocessingPass } from './postprocessing';
 import { MarkingPass } from './marking';
+import { createCopyRenderable } from '../../mol-gl/compute/util';
 var DepthMergeSchema = __assign(__assign({}, QuadSchema), { tDepthPrimitives: TextureSpec('texture', 'depth', 'ushort', 'nearest'), tDepthVolumes: TextureSpec('texture', 'depth', 'ushort', 'nearest'), uTexSize: UniformSpec('v2'), dPackedDepth: DefineSpec('boolean') });
 var DepthMergeShaderCode = ShaderCode('depth-merge', quad_vert, depthMerge_frag);
 function getDepthMergeRenderable(ctx, depthTexturePrimitives, depthTextureVolumes, packedDepth) {
@@ -28,14 +28,6 @@ function getDepthMergeRenderable(ctx, depthTexturePrimitives, depthTextureVolume
     var renderItem = createComputeRenderItem(ctx, 'triangles', DepthMergeShaderCode, schema, values);
     return createComputeRenderable(renderItem, values);
 }
-var CopySchema = __assign(__assign({}, QuadSchema), { tColor: TextureSpec('texture', 'rgba', 'ubyte', 'nearest'), uTexSize: UniformSpec('v2') });
-var CopyShaderCode = ShaderCode('copy', quad_vert, copy_frag);
-function getCopyRenderable(ctx, colorTexture) {
-    var values = __assign(__assign({}, QuadValues), { tColor: ValueCell.create(colorTexture), uTexSize: ValueCell.create(Vec2.create(colorTexture.getWidth(), colorTexture.getHeight())) });
-    var schema = __assign({}, CopySchema);
-    var renderItem = createComputeRenderItem(ctx, 'triangles', CopyShaderCode, schema, values);
-    return createComputeRenderable(renderItem, values);
-}
 var DrawPass = /** @class */ (function () {
     function DrawPass(webgl, width, height, enableWboit) {
         this.webgl = webgl;
@@ -58,8 +50,8 @@ var DrawPass = /** @class */ (function () {
         this.marking = new MarkingPass(webgl, width, height);
         this.postprocessing = new PostprocessingPass(webgl, this);
         this.antialiasing = new AntialiasingPass(webgl, this);
-        this.copyFboTarget = getCopyRenderable(webgl, this.colorTarget.texture);
-        this.copyFboPostprocessing = getCopyRenderable(webgl, this.postprocessing.target.texture);
+        this.copyFboTarget = createCopyRenderable(webgl, this.colorTarget.texture);
+        this.copyFboPostprocessing = createCopyRenderable(webgl, this.postprocessing.target.texture);
     }
     Object.defineProperty(DrawPass.prototype, "wboitEnabled", {
         get: function () {

package/lib/mol-canvas3d/passes/draw.js.map

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package/lib/mol-canvas3d/passes/image.d.ts

@@ -47,7 +47,7 @@ export declare const ImageParams: {
         innerEdgeFactor: number;
     }>>;
     cameraHelper: PD.Group<PD.Normalize<{
-        axes: PD.NamedParams<PD.Normalize<{
+        axes: PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<{
             alpha: any;
             ignoreLight: any;
             colorX: any;
@@ -59,7 +59,7 @@ export declare const ImageParams: {
             flatShaded: any;
             xrayShaded: any;
             quality: any;
-        }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">;
+        }>, "on">;
     }>>;
 };
 export declare type ImageProps = PD.Values<typeof ImageParams>;

package/lib/mol-data/int/impl/ordered-set.d.ts

@@ -31,9 +31,9 @@ export declare function findPredecessorIndex(set: OrderedSetImpl, x: number): nu
 export declare function findPredecessorIndexInInterval(set: OrderedSetImpl, x: number, bounds: I): number;
 export declare function findRange(set: OrderedSetImpl, min: number, max: number): I<number>;
 export declare function intersectionSize(a: OrderedSetImpl, b: OrderedSetImpl): number;
-export declare function union(a: OrderedSetImpl, b: OrderedSetImpl): I<number> | S<number>;
-export declare function intersect(a: OrderedSetImpl, b: OrderedSetImpl): I<number> | S<number>;
-export declare function subtract(a: OrderedSetImpl, b: OrderedSetImpl): I<number> | S<number>;
+export declare function union(a: OrderedSetImpl, b: OrderedSetImpl): S<number> | I<number>;
+export declare function intersect(a: OrderedSetImpl, b: OrderedSetImpl): S<number> | I<number>;
+export declare function subtract(a: OrderedSetImpl, b: OrderedSetImpl): S<number> | I<number>;
 export declare function forEach(set: OrderedSetImpl, f: (value: number, i: number, ctx: any) => void, ctx: any): any;
 export declare function forEachSegment(set: OrderedSetImpl, segment: (v: number) => number, f: (value: number, segIndex: number, ctx: any) => void, ctx: any): any;
 export declare function indexedIntersect(idxA: OrderedSetImpl, a: S, b: S): OrderedSetImpl;

package/lib/mol-data/int/impl/sorted-array.d.ts

@@ -9,7 +9,7 @@ export declare const Empty: Nums;
 export declare function ofSingleton(v: number): number[];
 export declare function ofSortedArray(xs: Nums): Nums;
 export declare function ofUnsortedArray(xs: Nums): Nums;
-export declare function ofRange(min: number, max: number): Int32Array | never[];
+export declare function ofRange(min: number, max: number): never[] | Int32Array;
 export declare function is(xs: any): xs is Nums;
 export declare function isRange(xs: Nums): boolean;
 export declare function start(xs: Nums): number;

package/lib/mol-geo/geometry/base.d.ts

@@ -1,5 +1,5 @@
 /**
- * Copyright (c) 2018 mol* contributors, licensed under MIT, See LICENSE file for more info.
+ * Copyright (c) 2018-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
@@ -24,6 +24,18 @@ export declare const VisualQualityInfo: {
 export declare type VisualQuality = keyof typeof VisualQualityInfo;
 export declare const VisualQualityNames: ("custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest")[];
 export declare const VisualQualityOptions: ["custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest", string][];
+export declare const ColorSmoothingParams: {
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+        resolutionFactor: number;
+        sampleStride: number;
+    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
+};
+export declare type ColorSmoothingParams = typeof ColorSmoothingParams;
+export declare function hasColorSmoothingProp(props: PD.Values<any>): props is PD.Values<ColorSmoothingParams>;
+export declare function getColorSmoothingProps(smoothColors: PD.Values<ColorSmoothingParams>['smoothColors'], preferSmoothing?: boolean, resolution?: number): {
+    resolution: number;
+    stride: number;
+} | undefined;
 export declare namespace BaseGeometry {
     const Params: {
         alpha: PD.Numeric;

package/lib/mol-geo/geometry/base.js

@@ -1,5 +1,5 @@
 /**
- * Copyright (c) 2018 mol* contributors, licensed under MIT, See LICENSE file for more info.
+ * Copyright (c) 2018-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
@@ -11,6 +11,7 @@ import { ColorNames } from '../../mol-util/color/names';
 import { NullLocation } from '../../mol-model/location';
 import { UniformColorTheme } from '../../mol-theme/color/uniform';
 import { UniformSizeTheme } from '../../mol-theme/size/uniform';
+import { smoothstep } from '../../mol-math/interpolate';
 export var VisualQualityInfo = {
     'custom': {},
     'auto': {},
@@ -25,6 +26,38 @@ export var VisualQualityInfo = {
 export var VisualQualityNames = Object.keys(VisualQualityInfo);
 export var VisualQualityOptions = PD.arrayToOptions(VisualQualityNames);
 //
+export var ColorSmoothingParams = {
+    smoothColors: PD.MappedStatic('auto', {
+        auto: PD.Group({}),
+        on: PD.Group({
+            resolutionFactor: PD.Numeric(2, { min: 0.5, max: 6, step: 0.1 }),
+            sampleStride: PD.Numeric(3, { min: 1, max: 12, step: 1 }),
+        }),
+        off: PD.Group({})
+    }),
+};
+export function hasColorSmoothingProp(props) {
+    return !!props.smoothColors;
+}
+export function getColorSmoothingProps(smoothColors, preferSmoothing, resolution) {
+    if ((smoothColors.name === 'on' || (smoothColors.name === 'auto' && preferSmoothing)) && resolution && resolution < 3) {
+        var stride = 3;
+        if (smoothColors.name === 'on') {
+            resolution *= smoothColors.params.resolutionFactor;
+            stride = smoothColors.params.sampleStride;
+        }
+        else {
+            // https://graphtoy.com/?f1(x,t)=(2-smoothstep(0,1.1,x))*x&coords=0.7,0.6,1.8
+            resolution *= 2 - smoothstep(0, 1.1, resolution);
+            resolution = Math.max(0.5, resolution);
+            if (resolution > 1.2)
+                stride = 2;
+        }
+        return { resolution: resolution, stride: stride };
+    }
+    ;
+}
+//
 export var BaseGeometry;
 (function (BaseGeometry) {
     BaseGeometry.Params = {

package/lib/mol-geo/geometry/base.js.map

@@ -1 +1 @@
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+{"version":3,"file":"base.js","sourceRoot":"","sources":["../../../src/mol-geo/geometry/base.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAGH,OAAO,EAAE,SAAS,EAAE,MAAM,gBAAgB,CAAC;AAE3C,OAAO,EAAE,gBAAgB,EAAE,MAAM,2BAA2B,CAAC;AAC7D,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,iCAAiC,CAAC;AACxE,OAAO,EAAiB,uBAAuB,EAAE,MAAM,kBAAkB,CAAC;AAE1E,OAAO,EAAE,UAAU,EAAE,MAAM,4BAA4B,CAAC;AACxD,OAAO,EAAE,YAAY,EAAE,MAAM,0BAA0B,CAAC;AACxD,OAAO,EAAE,iBAAiB,EAAE,MAAM,+BAA+B,CAAC;AAClE,OAAO,EAAE,gBAAgB,EAAE,MAAM,8BAA8B,CAAC;AAChE,OAAO,EAAE,UAAU,EAAE,MAAM,4BAA4B,CAAC;AAExD,MAAM,CAAC,IAAM,iBAAiB,GAAG;IAC7B,QAAQ,EAAE,EAAE;IACZ,MAAM,EAAE,EAAE;IACV,SAAS,EAAE,EAAE;IACb,QAAQ,EAAE,EAAE;IACZ,MAAM,EAAE,EAAE;IACV,QAAQ,EAAE,EAAE;IACZ,KAAK,EAAE,EAAE;IACT,OAAO,EAAE,EAAE;IACX,QAAQ,EAAE,EAAE;CACf,CAAC;AAEF,MAAM,CAAC,IAAM,kBAAkB,GAAG,MAAM,CAAC,IAAI,CAAC,iBAAiB,CAAoB,CAAC;AACpF,MAAM,CAAC,IAAM,oBAAoB,GAAG,EAAE,CAAC,cAAc,CAAC,kBAAkB,CAAC,CAAC;AAE1E,EAAE;AAEF,MAAM,CAAC,IAAM,oBAAoB,GAAG;IAChC,YAAY,EAAE,EAAE,CAAC,YAAY,CAAC,MAAM,EAAE;QAClC,IAAI,EAAE,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC;QAClB,EAAE,EAAE,EAAE,CAAC,KAAK,CAAC;YACT,gBAAgB,EAAE,EAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,CAAC,EAAE,IAAI,EAAE,GAAG,EAAE,CAAC;YAChE,YAAY,EAAE,EAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,EAAE,EAAE,IAAI,EAAE,CAAC,EAAE,CAAC;SAC5D,CAAC;QACF,GAAG,EAAE,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC;KACpB,CAAC;CACL,CAAC;AAGF,MAAM,UAAU,qBAAqB,CAAC,KAAqB;IACvD,OAAO,CAAC,CAAC,KAAK,CAAC,YAAY,CAAC;AAChC,CAAC;AAED,MAAM,UAAU,sBAAsB,CAAC,YAA6D,EAAE,eAAyB,EAAE,UAAmB;IAChJ,IAAI,CAAC,YAAY,CAAC,IAAI,KAAK,IAAI,IAAI,CAAC,YAAY,CAAC,IAAI,KAAK,MAAM,IAAI,eAAe,CAAC,CAAC,IAAI,UAAU,IAAI,UAAU,GAAG,CAAC,EAAE;QACnH,IAAI,MAAM,GAAG,CAAC,CAAC;QACf,IAAI,YAAY,CAAC,IAAI,KAAK,IAAI,EAAE;YAC5B,UAAU,IAAI,YAAY,CAAC,MAAM,CAAC,gBAAgB,CAAC;YACnD,MAAM,GAAG,YAAY,CAAC,MAAM,CAAC,YAAY,CAAC;SAC7C;aAAM;YACH,6EAA6E;YAC7E,UAAU,IAAI,CAAC,GAAG,UAAU,CAAC,CAAC,EAAE,GAAG,EAAE,UAAU,CAAC,CAAC;YACjD,UAAU,GAAG,IAAI,CAAC,GAAG,CAAC,GAAG,EAAE,UAAU,CAAC,CAAC;YACvC,IAAI,UAAU,GAAG,GAAG;gBAAE,MAAM,GAAG,CAAC,CAAC;SACpC;QACD,OAAO,EAAE,UAAU,YAAA,EAAE,MAAM,QAAA,EAAE,CAAC;KACjC;IAAA,CAAC;AACN,CAAC;AAED,EAAE;AAEF,MAAM,KAAW,YAAY,CAyD5B;AAzDD,WAAiB,YAAY;IACZ,mBAAM,GAAG;QAClB,KAAK,EAAE,EAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,CAAC,EAAE,IAAI,EAAE,IAAI,EAAE,EAAE,EAAE,KAAK,EAAE,SAAS,EAAE,WAAW,EAAE,IAAI,EAAE,WAAW,EAAE,wDAAwD,EAAE,CAAC;QACpK,OAAO,EAAE,EAAE,CAAC,MAAM,CAAgB,MAAM,EAAE,oBAAoB,EAAE,EAAE,WAAW,EAAE,IAAI,EAAE,WAAW,EAAE,iDAAiD,EAAE,CAAC;KACzJ,CAAC;IAGW,4BAAe,GAAY,EAAE,QAAQ,EAAE,SAAS,EAAE,CAAC;IACnD,mCAAsB,GAAY;QAC3C,QAAQ,EAAE,gBAAgB;QAC1B,MAAM,EAAE,UAAC,MAAyB,IAAK,OAAA,OAAO,MAAM,CAAC,OAAO,KAAK,WAAW,IAAI,MAAM,CAAC,OAAO,KAAK,QAAQ,EAApE,CAAoE;KAC9G,CAAC;IAIF,SAAgB,YAAY,CAAC,UAA4B,EAAE,SAAa,EAAE,SAAyB;QAAtE,2BAAA,EAAA,aAAa,UAAU,CAAC,IAAI;QAAE,0BAAA,EAAA,aAAa;QACpE,IAAI,CAAC,SAAS;YAAE,SAAS,GAAG,uBAAuB,EAAE,CAAC;QACtD,IAAM,gBAAgB,GAAG,gBAAgB,CAAC,CAAC,EAAE,SAAS,CAAC,aAAa,CAAC,GAAG,CAAC,KAAK,EAAE,CAAC,EAAE,cAAM,OAAA,YAAY,EAAZ,CAAY,EAAE,KAAK,EAAE,cAAM,OAAA,KAAK,EAAL,CAAK,CAAC,CAAC;QAC3H,IAAM,KAAK,GAAU;YACjB,KAAK,EAAE,iBAAiB,CAAC,EAAE,EAAE,EAAE,KAAK,EAAE,UAAU,EAAE,CAAC;YACnD,IAAI,EAAE,gBAAgB,CAAC,EAAE,EAAE,EAAE,KAAK,EAAE,SAAS,EAAE,CAAC;SACnD,CAAC;QACF,OAAO,EAAE,SAAS,WAAA,EAAE,gBAAgB,kBAAA,EAAE,KAAK,OAAA,EAAE,CAAC;IAClD,CAAC;IARe,yBAAY,eAQ3B,CAAA;IAED,SAAgB,YAAY,CAAC,KAAwB,EAAE,MAAc;QACjE,OAAO;YACH,KAAK,EAAE,SAAS,CAAC,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC;YACpC,MAAM,EAAE,SAAS,CAAC,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC;YACrC,YAAY,EAAE,SAAS,CAAC,MAAM,CAAC,MAAM,CAAC,WAAW,CAAC;YAClD,WAAW,EAAE,SAAS,CAAC,MAAM,CAAC,MAAM,CAAC,UAAU,CAAC;YAChD,SAAS,EAAE,SAAS,CAAC,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC;SAChD,CAAC;IACN,CAAC;IARe,yBAAY,eAQ3B,CAAA;IAED,SAAgB,YAAY,CAAC,MAAkB,EAAE,KAAwB;QACrE,SAAS,CAAC,eAAe,CAAC,MAAM,CAAC,KAAK,EAAE,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,uCAAuC;IACjG,CAAC;IAFe,yBAAY,eAE3B,CAAA;IAED,SAAgB,qBAAqB,CAAC,KAAsC;QAAtC,sBAAA,EAAA,UAAsC;QACxE,IAAM,MAAM,GAAG,KAAK,CAAC,KAAK,KAAK,SAAS,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,KAAK,CAAC,KAAK,KAAK,CAAC,CAAC;QACpE,OAAO;YACH,QAAQ,EAAE,KAAK;YACf,OAAO,EAAE,IAAI;YACb,WAAW,EAAE,CAAC;YACd,QAAQ,EAAE,IAAI;YACd,SAAS,EAAE,KAAK;YAChB,MAAM,QAAA;YACN,UAAU,EAAE,MAAM;YAClB,MAAM,EAAE,KAAK;SAChB,CAAC;IACN,CAAC;IAZe,kCAAqB,wBAYpC,CAAA;IAED,SAAgB,qBAAqB,CAAC,KAAsB,EAAE,KAAwB;QAClF,KAAK,CAAC,MAAM,GAAG,KAAK,CAAC,KAAK,GAAG,KAAK,CAAC,WAAW,IAAI,CAAC,CAAC;QACpD,KAAK,CAAC,UAAU,GAAG,KAAK,CAAC,MAAM,CAAC;IACpC,CAAC;IAHe,kCAAqB,wBAGpC,CAAA;AACL,CAAC,EAzDgB,YAAY,KAAZ,YAAY,QAyD5B"}

package/lib/mol-geo/geometry/image/image.d.ts

@@ -16,7 +16,7 @@ export declare const InterpolationTypes: {
     bspline: string;
 };
 export declare type InterpolationTypes = keyof typeof InterpolationTypes;
-export declare const InterpolationTypeNames: ("nearest" | "catmulrom" | "mitchell" | "bspline")[];
+export declare const InterpolationTypeNames: ("bspline" | "nearest" | "catmulrom" | "mitchell")[];
 export { Image };
 interface Image {
     readonly kind: 'image';
@@ -31,7 +31,7 @@ declare namespace Image {
     function create(imageTexture: TextureImage<Uint8Array>, corners: Float32Array, groupTexture: TextureImage<Uint8Array>, image?: Image): Image;
     function createEmpty(image?: Image): Image;
     const Params: {
-        interpolation: PD.Select<"nearest" | "catmulrom" | "mitchell" | "bspline">;
+        interpolation: PD.Select<"bspline" | "nearest" | "catmulrom" | "mitchell">;
         alpha: PD.Numeric;
         quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
     };

package/lib/mol-geo/geometry/mesh/color-smoothing.d.ts

@@ -3,6 +3,7 @@
  *
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
+import { MeshValues } from '../../../mol-gl/renderable/mesh';
 import { TextureImage } from '../../../mol-gl/renderable/util';
 import { WebGLContext } from '../../../mol-gl/webgl/context';
 import { Texture } from '../../../mol-gl/webgl/texture';
@@ -20,6 +21,7 @@ interface ColorSmoothingInput {
     colorType: 'group' | 'groupInstance';
     boundingSphere: Sphere3D;
     invariantBoundingSphere: Sphere3D;
+    itemSize: 4 | 3 | 1;
 }
 export declare function calcMeshColorSmoothing(input: ColorSmoothingInput, resolution: number, stride: number, webgl?: WebGLContext, texture?: Texture): {
     kind: "volume";
@@ -27,7 +29,7 @@ export declare function calcMeshColorSmoothing(input: ColorSmoothingInput, resol
     gridTexDim: Vec2;
     gridDim: Vec3;
     gridTransform: Vec4;
-    type: "volumeInstance" | "volume";
+    type: "volume" | "volumeInstance";
     texDim?: undefined;
 } | {
     kind: "vertex";
@@ -48,8 +50,13 @@ interface ColorInterpolationInput {
     gridTexDim: Vec2;
     gridDim: Vec3;
     gridTransform: Vec4;
-    vertexStride: number;
-    colorStride: number;
+    vertexStride: 3 | 4;
+    colorStride: 1 | 3 | 4;
+    outputStride: 1 | 3 | 4;
+    itemOffset?: 0 | 1 | 2 | 3;
 }
 export declare function getTrilinearlyInterpolated(input: ColorInterpolationInput): TextureImage<Uint8Array>;
+export declare function applyMeshColorSmoothing(values: MeshValues, resolution: number, stride: number, webgl?: WebGLContext, colorTexture?: Texture): void;
+export declare function applyMeshOverpaintSmoothing(values: MeshValues, resolution: number, stride: number, webgl?: WebGLContext, colorTexture?: Texture): void;
+export declare function applyMeshTransparencySmoothing(values: MeshValues, resolution: number, stride: number, webgl?: WebGLContext, colorTexture?: Texture): void;
 export {};