@synsci/cli-darwin-x64-baseline 1.1.77 → 1.1.78

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (830) hide show
  1. package/bin/skills/adaptyv/SKILL.md +114 -0
  2. package/bin/skills/adaptyv/reference/api_reference.md +308 -0
  3. package/bin/skills/adaptyv/reference/examples.md +913 -0
  4. package/bin/skills/adaptyv/reference/experiments.md +360 -0
  5. package/bin/skills/adaptyv/reference/protein_optimization.md +637 -0
  6. package/bin/skills/aeon/SKILL.md +374 -0
  7. package/bin/skills/aeon/references/anomaly_detection.md +154 -0
  8. package/bin/skills/aeon/references/classification.md +144 -0
  9. package/bin/skills/aeon/references/clustering.md +123 -0
  10. package/bin/skills/aeon/references/datasets_benchmarking.md +387 -0
  11. package/bin/skills/aeon/references/distances.md +256 -0
  12. package/bin/skills/aeon/references/forecasting.md +140 -0
  13. package/bin/skills/aeon/references/networks.md +289 -0
  14. package/bin/skills/aeon/references/regression.md +118 -0
  15. package/bin/skills/aeon/references/segmentation.md +163 -0
  16. package/bin/skills/aeon/references/similarity_search.md +187 -0
  17. package/bin/skills/aeon/references/transformations.md +246 -0
  18. package/bin/skills/alphafold-database/SKILL.md +513 -0
  19. package/bin/skills/alphafold-database/references/api_reference.md +423 -0
  20. package/bin/skills/anndata/SKILL.md +400 -0
  21. package/bin/skills/anndata/references/best_practices.md +525 -0
  22. package/bin/skills/anndata/references/concatenation.md +396 -0
  23. package/bin/skills/anndata/references/data_structure.md +314 -0
  24. package/bin/skills/anndata/references/io_operations.md +404 -0
  25. package/bin/skills/anndata/references/manipulation.md +516 -0
  26. package/bin/skills/arboreto/SKILL.md +243 -0
  27. package/bin/skills/arboreto/references/algorithms.md +138 -0
  28. package/bin/skills/arboreto/references/basic_inference.md +151 -0
  29. package/bin/skills/arboreto/references/distributed_computing.md +242 -0
  30. package/bin/skills/arboreto/scripts/basic_grn_inference.py +97 -0
  31. package/bin/skills/astropy/SKILL.md +331 -0
  32. package/bin/skills/astropy/references/coordinates.md +273 -0
  33. package/bin/skills/astropy/references/cosmology.md +307 -0
  34. package/bin/skills/astropy/references/fits.md +396 -0
  35. package/bin/skills/astropy/references/tables.md +489 -0
  36. package/bin/skills/astropy/references/time.md +404 -0
  37. package/bin/skills/astropy/references/units.md +178 -0
  38. package/bin/skills/astropy/references/wcs_and_other_modules.md +373 -0
  39. package/bin/skills/benchling-integration/SKILL.md +480 -0
  40. package/bin/skills/benchling-integration/references/api_endpoints.md +883 -0
  41. package/bin/skills/benchling-integration/references/authentication.md +379 -0
  42. package/bin/skills/benchling-integration/references/sdk_reference.md +774 -0
  43. package/bin/skills/biopython/SKILL.md +443 -0
  44. package/bin/skills/biopython/references/advanced.md +577 -0
  45. package/bin/skills/biopython/references/alignment.md +362 -0
  46. package/bin/skills/biopython/references/blast.md +455 -0
  47. package/bin/skills/biopython/references/databases.md +484 -0
  48. package/bin/skills/biopython/references/phylogenetics.md +566 -0
  49. package/bin/skills/biopython/references/sequence_io.md +285 -0
  50. package/bin/skills/biopython/references/structure.md +564 -0
  51. package/bin/skills/biorxiv-database/SKILL.md +483 -0
  52. package/bin/skills/biorxiv-database/references/api_reference.md +280 -0
  53. package/bin/skills/biorxiv-database/scripts/biorxiv_search.py +445 -0
  54. package/bin/skills/bioservices/SKILL.md +361 -0
  55. package/bin/skills/bioservices/references/identifier_mapping.md +685 -0
  56. package/bin/skills/bioservices/references/services_reference.md +636 -0
  57. package/bin/skills/bioservices/references/workflow_patterns.md +811 -0
  58. package/bin/skills/bioservices/scripts/batch_id_converter.py +347 -0
  59. package/bin/skills/bioservices/scripts/compound_cross_reference.py +378 -0
  60. package/bin/skills/bioservices/scripts/pathway_analysis.py +309 -0
  61. package/bin/skills/bioservices/scripts/protein_analysis_workflow.py +408 -0
  62. package/bin/skills/brenda-database/SKILL.md +719 -0
  63. package/bin/skills/brenda-database/references/api_reference.md +537 -0
  64. package/bin/skills/brenda-database/scripts/brenda_queries.py +844 -0
  65. package/bin/skills/brenda-database/scripts/brenda_visualization.py +772 -0
  66. package/bin/skills/brenda-database/scripts/enzyme_pathway_builder.py +1053 -0
  67. package/bin/skills/cellxgene-census/SKILL.md +511 -0
  68. package/bin/skills/cellxgene-census/references/census_schema.md +182 -0
  69. package/bin/skills/cellxgene-census/references/common_patterns.md +351 -0
  70. package/bin/skills/chembl-database/SKILL.md +389 -0
  71. package/bin/skills/chembl-database/references/api_reference.md +272 -0
  72. package/bin/skills/chembl-database/scripts/example_queries.py +278 -0
  73. package/bin/skills/cirq/SKILL.md +346 -0
  74. package/bin/skills/cirq/references/building.md +307 -0
  75. package/bin/skills/cirq/references/experiments.md +572 -0
  76. package/bin/skills/cirq/references/hardware.md +515 -0
  77. package/bin/skills/cirq/references/noise.md +515 -0
  78. package/bin/skills/cirq/references/simulation.md +350 -0
  79. package/bin/skills/cirq/references/transformation.md +416 -0
  80. package/bin/skills/clinicaltrials-database/SKILL.md +507 -0
  81. package/bin/skills/clinicaltrials-database/references/api_reference.md +358 -0
  82. package/bin/skills/clinicaltrials-database/scripts/query_clinicaltrials.py +215 -0
  83. package/bin/skills/clinpgx-database/SKILL.md +638 -0
  84. package/bin/skills/clinpgx-database/references/api_reference.md +757 -0
  85. package/bin/skills/clinpgx-database/scripts/query_clinpgx.py +518 -0
  86. package/bin/skills/clinvar-database/SKILL.md +362 -0
  87. package/bin/skills/clinvar-database/references/api_reference.md +227 -0
  88. package/bin/skills/clinvar-database/references/clinical_significance.md +218 -0
  89. package/bin/skills/clinvar-database/references/data_formats.md +358 -0
  90. package/bin/skills/cobrapy/SKILL.md +463 -0
  91. package/bin/skills/cobrapy/references/api_quick_reference.md +655 -0
  92. package/bin/skills/cobrapy/references/workflows.md +593 -0
  93. package/bin/skills/cosmic-database/SKILL.md +336 -0
  94. package/bin/skills/cosmic-database/references/cosmic_data_reference.md +220 -0
  95. package/bin/skills/cosmic-database/scripts/download_cosmic.py +231 -0
  96. package/bin/skills/dask/SKILL.md +456 -0
  97. package/bin/skills/dask/references/arrays.md +497 -0
  98. package/bin/skills/dask/references/bags.md +468 -0
  99. package/bin/skills/dask/references/best-practices.md +277 -0
  100. package/bin/skills/dask/references/dataframes.md +368 -0
  101. package/bin/skills/dask/references/futures.md +541 -0
  102. package/bin/skills/dask/references/schedulers.md +504 -0
  103. package/bin/skills/datacommons-client/SKILL.md +255 -0
  104. package/bin/skills/datacommons-client/references/getting_started.md +417 -0
  105. package/bin/skills/datacommons-client/references/node.md +250 -0
  106. package/bin/skills/datacommons-client/references/observation.md +185 -0
  107. package/bin/skills/datacommons-client/references/resolve.md +246 -0
  108. package/bin/skills/datamol/SKILL.md +706 -0
  109. package/bin/skills/datamol/references/conformers_module.md +131 -0
  110. package/bin/skills/datamol/references/core_api.md +130 -0
  111. package/bin/skills/datamol/references/descriptors_viz.md +195 -0
  112. package/bin/skills/datamol/references/fragments_scaffolds.md +174 -0
  113. package/bin/skills/datamol/references/io_module.md +109 -0
  114. package/bin/skills/datamol/references/reactions_data.md +218 -0
  115. package/bin/skills/deepchem/SKILL.md +597 -0
  116. package/bin/skills/deepchem/references/api_reference.md +303 -0
  117. package/bin/skills/deepchem/references/workflows.md +491 -0
  118. package/bin/skills/deepchem/scripts/graph_neural_network.py +338 -0
  119. package/bin/skills/deepchem/scripts/predict_solubility.py +224 -0
  120. package/bin/skills/deepchem/scripts/transfer_learning.py +375 -0
  121. package/bin/skills/deeptools/SKILL.md +531 -0
  122. package/bin/skills/deeptools/assets/quick_reference.md +58 -0
  123. package/bin/skills/deeptools/references/effective_genome_sizes.md +116 -0
  124. package/bin/skills/deeptools/references/normalization_methods.md +410 -0
  125. package/bin/skills/deeptools/references/tools_reference.md +533 -0
  126. package/bin/skills/deeptools/references/workflows.md +474 -0
  127. package/bin/skills/deeptools/scripts/validate_files.py +195 -0
  128. package/bin/skills/deeptools/scripts/workflow_generator.py +454 -0
  129. package/bin/skills/denario/SKILL.md +215 -0
  130. package/bin/skills/denario/references/examples.md +494 -0
  131. package/bin/skills/denario/references/installation.md +213 -0
  132. package/bin/skills/denario/references/llm_configuration.md +265 -0
  133. package/bin/skills/denario/references/research_pipeline.md +471 -0
  134. package/bin/skills/diffdock/SKILL.md +483 -0
  135. package/bin/skills/diffdock/assets/batch_template.csv +4 -0
  136. package/bin/skills/diffdock/assets/custom_inference_config.yaml +90 -0
  137. package/bin/skills/diffdock/references/confidence_and_limitations.md +182 -0
  138. package/bin/skills/diffdock/references/parameters_reference.md +163 -0
  139. package/bin/skills/diffdock/references/workflows_examples.md +392 -0
  140. package/bin/skills/diffdock/scripts/analyze_results.py +334 -0
  141. package/bin/skills/diffdock/scripts/prepare_batch_csv.py +254 -0
  142. package/bin/skills/diffdock/scripts/setup_check.py +278 -0
  143. package/bin/skills/dnanexus-integration/SKILL.md +383 -0
  144. package/bin/skills/dnanexus-integration/references/app-development.md +247 -0
  145. package/bin/skills/dnanexus-integration/references/configuration.md +646 -0
  146. package/bin/skills/dnanexus-integration/references/data-operations.md +400 -0
  147. package/bin/skills/dnanexus-integration/references/job-execution.md +412 -0
  148. package/bin/skills/dnanexus-integration/references/python-sdk.md +523 -0
  149. package/bin/skills/document-skills/docx/LICENSE.txt +30 -0
  150. package/bin/skills/document-skills/docx/SKILL.md +233 -0
  151. package/bin/skills/document-skills/docx/docx-js.md +350 -0
  152. package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chart.xsd +1499 -0
  153. package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chartDrawing.xsd +146 -0
  154. package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-diagram.xsd +1085 -0
  155. package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-lockedCanvas.xsd +11 -0
  156. package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-main.xsd +3081 -0
  157. package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-picture.xsd +23 -0
  158. package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-spreadsheetDrawing.xsd +185 -0
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  160. package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/pml.xsd +1676 -0
  161. package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-additionalCharacteristics.xsd +28 -0
  162. package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-bibliography.xsd +144 -0
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  806. package/bin/skills/uniprot-database/references/api_fields.md +275 -0
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  808. package/bin/skills/uniprot-database/references/query_syntax.md +256 -0
  809. package/bin/skills/uniprot-database/scripts/uniprot_client.py +341 -0
  810. package/bin/skills/uspto-database/SKILL.md +607 -0
  811. package/bin/skills/uspto-database/references/additional_apis.md +394 -0
  812. package/bin/skills/uspto-database/references/patentsearch_api.md +266 -0
  813. package/bin/skills/uspto-database/references/peds_api.md +212 -0
  814. package/bin/skills/uspto-database/references/trademark_api.md +358 -0
  815. package/bin/skills/uspto-database/scripts/patent_search.py +290 -0
  816. package/bin/skills/uspto-database/scripts/peds_client.py +285 -0
  817. package/bin/skills/uspto-database/scripts/trademark_client.py +311 -0
  818. package/bin/skills/vaex/SKILL.md +182 -0
  819. package/bin/skills/vaex/references/core_dataframes.md +367 -0
  820. package/bin/skills/vaex/references/data_processing.md +555 -0
  821. package/bin/skills/vaex/references/io_operations.md +703 -0
  822. package/bin/skills/vaex/references/machine_learning.md +728 -0
  823. package/bin/skills/vaex/references/performance.md +571 -0
  824. package/bin/skills/vaex/references/visualization.md +613 -0
  825. package/bin/skills/zarr-python/SKILL.md +779 -0
  826. package/bin/skills/zarr-python/references/api_reference.md +515 -0
  827. package/bin/skills/zinc-database/SKILL.md +404 -0
  828. package/bin/skills/zinc-database/references/api_reference.md +692 -0
  829. package/bin/synsc +0 -0
  830. package/package.json +1 -1
@@ -0,0 +1,602 @@
1
+ # Polars Operations Reference
2
+
3
+ This reference covers all common Polars operations with comprehensive examples.
4
+
5
+ ## Selection Operations
6
+
7
+ ### Select Columns
8
+
9
+ **Basic selection:**
10
+ ```python
11
+ # Select specific columns
12
+ df.select("name", "age", "city")
13
+
14
+ # Using expressions
15
+ df.select(pl.col("name"), pl.col("age"))
16
+ ```
17
+
18
+ **Pattern-based selection:**
19
+ ```python
20
+ # All columns starting with "sales_"
21
+ df.select(pl.col("^sales_.*$"))
22
+
23
+ # All numeric columns
24
+ df.select(pl.col(pl.NUMERIC_DTYPES))
25
+
26
+ # All columns except specific ones
27
+ df.select(pl.all().exclude("id", "timestamp"))
28
+ ```
29
+
30
+ **Computed columns:**
31
+ ```python
32
+ df.select(
33
+ "name",
34
+ (pl.col("age") * 12).alias("age_in_months"),
35
+ (pl.col("salary") * 1.1).alias("salary_after_raise")
36
+ )
37
+ ```
38
+
39
+ ### With Columns (Add/Modify)
40
+
41
+ Add new columns or modify existing ones while preserving all other columns:
42
+
43
+ ```python
44
+ # Add new columns
45
+ df.with_columns(
46
+ age_doubled=pl.col("age") * 2,
47
+ full_name=pl.col("first_name") + " " + pl.col("last_name")
48
+ )
49
+
50
+ # Modify existing columns
51
+ df.with_columns(
52
+ pl.col("name").str.to_uppercase().alias("name"),
53
+ pl.col("salary").cast(pl.Float64).alias("salary")
54
+ )
55
+
56
+ # Multiple operations in parallel
57
+ df.with_columns(
58
+ pl.col("value") * 10,
59
+ pl.col("value") * 100,
60
+ pl.col("value") * 1000,
61
+ )
62
+ ```
63
+
64
+ ## Filtering Operations
65
+
66
+ ### Basic Filtering
67
+
68
+ ```python
69
+ # Single condition
70
+ df.filter(pl.col("age") > 25)
71
+
72
+ # Multiple conditions (AND)
73
+ df.filter(
74
+ pl.col("age") > 25,
75
+ pl.col("city") == "NY"
76
+ )
77
+
78
+ # OR conditions
79
+ df.filter(
80
+ (pl.col("age") > 30) | (pl.col("salary") > 100000)
81
+ )
82
+
83
+ # NOT condition
84
+ df.filter(~pl.col("active"))
85
+ df.filter(pl.col("city") != "NY")
86
+ ```
87
+
88
+ ### Advanced Filtering
89
+
90
+ **String operations:**
91
+ ```python
92
+ # Contains substring
93
+ df.filter(pl.col("name").str.contains("John"))
94
+
95
+ # Starts with
96
+ df.filter(pl.col("email").str.starts_with("admin"))
97
+
98
+ # Regex match
99
+ df.filter(pl.col("phone").str.contains(r"^\d{3}-\d{3}-\d{4}$"))
100
+ ```
101
+
102
+ **Membership checks:**
103
+ ```python
104
+ # In list
105
+ df.filter(pl.col("city").is_in(["NY", "LA", "SF"]))
106
+
107
+ # Not in list
108
+ df.filter(~pl.col("status").is_in(["inactive", "deleted"]))
109
+ ```
110
+
111
+ **Range filters:**
112
+ ```python
113
+ # Between values
114
+ df.filter(pl.col("age").is_between(25, 35))
115
+
116
+ # Date range
117
+ df.filter(
118
+ pl.col("date") >= pl.date(2023, 1, 1),
119
+ pl.col("date") <= pl.date(2023, 12, 31)
120
+ )
121
+ ```
122
+
123
+ **Null filtering:**
124
+ ```python
125
+ # Filter out nulls
126
+ df.filter(pl.col("value").is_not_null())
127
+
128
+ # Keep only nulls
129
+ df.filter(pl.col("value").is_null())
130
+ ```
131
+
132
+ ## Grouping and Aggregation
133
+
134
+ ### Basic Group By
135
+
136
+ ```python
137
+ # Group by single column
138
+ df.group_by("department").agg(
139
+ pl.col("salary").mean().alias("avg_salary"),
140
+ pl.len().alias("employee_count")
141
+ )
142
+
143
+ # Group by multiple columns
144
+ df.group_by("department", "location").agg(
145
+ pl.col("salary").sum()
146
+ )
147
+
148
+ # Maintain order
149
+ df.group_by("category", maintain_order=True).agg(
150
+ pl.col("value").sum()
151
+ )
152
+ ```
153
+
154
+ ### Aggregation Functions
155
+
156
+ **Count and length:**
157
+ ```python
158
+ df.group_by("category").agg(
159
+ pl.len().alias("count"),
160
+ pl.col("id").count().alias("non_null_count"),
161
+ pl.col("id").n_unique().alias("unique_count")
162
+ )
163
+ ```
164
+
165
+ **Statistical aggregations:**
166
+ ```python
167
+ df.group_by("group").agg(
168
+ pl.col("value").sum().alias("total"),
169
+ pl.col("value").mean().alias("average"),
170
+ pl.col("value").median().alias("median"),
171
+ pl.col("value").std().alias("std_dev"),
172
+ pl.col("value").var().alias("variance"),
173
+ pl.col("value").min().alias("minimum"),
174
+ pl.col("value").max().alias("maximum"),
175
+ pl.col("value").quantile(0.95).alias("p95")
176
+ )
177
+ ```
178
+
179
+ **First and last:**
180
+ ```python
181
+ df.group_by("user_id").agg(
182
+ pl.col("timestamp").first().alias("first_seen"),
183
+ pl.col("timestamp").last().alias("last_seen"),
184
+ pl.col("event").first().alias("first_event")
185
+ )
186
+ ```
187
+
188
+ **List aggregation:**
189
+ ```python
190
+ # Collect values into lists
191
+ df.group_by("category").agg(
192
+ pl.col("item").alias("all_items") # Creates list column
193
+ )
194
+ ```
195
+
196
+ ### Conditional Aggregations
197
+
198
+ Filter within aggregations:
199
+
200
+ ```python
201
+ df.group_by("department").agg(
202
+ # Count high earners
203
+ (pl.col("salary") > 100000).sum().alias("high_earners"),
204
+
205
+ # Average of filtered values
206
+ pl.col("salary").filter(pl.col("bonus") > 0).mean().alias("avg_with_bonus"),
207
+
208
+ # Conditional sum
209
+ pl.when(pl.col("active"))
210
+ .then(pl.col("sales"))
211
+ .otherwise(0)
212
+ .sum()
213
+ .alias("active_sales")
214
+ )
215
+ ```
216
+
217
+ ### Multiple Aggregations
218
+
219
+ Combine multiple aggregations efficiently:
220
+
221
+ ```python
222
+ df.group_by("store_id").agg(
223
+ pl.col("transaction_id").count().alias("num_transactions"),
224
+ pl.col("amount").sum().alias("total_sales"),
225
+ pl.col("amount").mean().alias("avg_transaction"),
226
+ pl.col("customer_id").n_unique().alias("unique_customers"),
227
+ pl.col("amount").max().alias("largest_transaction"),
228
+ pl.col("timestamp").min().alias("first_transaction_date"),
229
+ pl.col("timestamp").max().alias("last_transaction_date")
230
+ )
231
+ ```
232
+
233
+ ## Window Functions
234
+
235
+ Window functions apply aggregations while preserving the original row count.
236
+
237
+ ### Basic Window Operations
238
+
239
+ **Group statistics:**
240
+ ```python
241
+ # Add group mean to each row
242
+ df.with_columns(
243
+ avg_age_by_dept=pl.col("age").mean().over("department")
244
+ )
245
+
246
+ # Multiple group columns
247
+ df.with_columns(
248
+ group_avg=pl.col("value").mean().over("category", "region")
249
+ )
250
+ ```
251
+
252
+ **Ranking:**
253
+ ```python
254
+ df.with_columns(
255
+ # Rank within groups
256
+ rank=pl.col("score").rank().over("team"),
257
+
258
+ # Dense rank (no gaps)
259
+ dense_rank=pl.col("score").rank(method="dense").over("team"),
260
+
261
+ # Row number
262
+ row_num=pl.col("timestamp").sort().rank(method="ordinal").over("user_id")
263
+ )
264
+ ```
265
+
266
+ ### Window Mapping Strategies
267
+
268
+ **group_to_rows (default):**
269
+ Preserves original row order:
270
+ ```python
271
+ df.with_columns(
272
+ group_mean=pl.col("value").mean().over("category", mapping_strategy="group_to_rows")
273
+ )
274
+ ```
275
+
276
+ **explode:**
277
+ Faster, groups rows together:
278
+ ```python
279
+ df.with_columns(
280
+ group_mean=pl.col("value").mean().over("category", mapping_strategy="explode")
281
+ )
282
+ ```
283
+
284
+ **join:**
285
+ Creates list columns:
286
+ ```python
287
+ df.with_columns(
288
+ group_values=pl.col("value").over("category", mapping_strategy="join")
289
+ )
290
+ ```
291
+
292
+ ### Rolling Windows
293
+
294
+ **Time-based rolling:**
295
+ ```python
296
+ df.with_columns(
297
+ rolling_avg=pl.col("value").rolling_mean(
298
+ window_size="7d",
299
+ by="date"
300
+ )
301
+ )
302
+ ```
303
+
304
+ **Row-based rolling:**
305
+ ```python
306
+ df.with_columns(
307
+ rolling_sum=pl.col("value").rolling_sum(window_size=3),
308
+ rolling_max=pl.col("value").rolling_max(window_size=5)
309
+ )
310
+ ```
311
+
312
+ ### Cumulative Operations
313
+
314
+ ```python
315
+ df.with_columns(
316
+ cumsum=pl.col("value").cum_sum().over("group"),
317
+ cummax=pl.col("value").cum_max().over("group"),
318
+ cummin=pl.col("value").cum_min().over("group"),
319
+ cumprod=pl.col("value").cum_prod().over("group")
320
+ )
321
+ ```
322
+
323
+ ### Shift and Lag/Lead
324
+
325
+ ```python
326
+ df.with_columns(
327
+ # Previous value (lag)
328
+ prev_value=pl.col("value").shift(1).over("user_id"),
329
+
330
+ # Next value (lead)
331
+ next_value=pl.col("value").shift(-1).over("user_id"),
332
+
333
+ # Calculate difference from previous
334
+ diff=pl.col("value") - pl.col("value").shift(1).over("user_id")
335
+ )
336
+ ```
337
+
338
+ ## Sorting
339
+
340
+ ### Basic Sorting
341
+
342
+ ```python
343
+ # Sort by single column
344
+ df.sort("age")
345
+
346
+ # Sort descending
347
+ df.sort("age", descending=True)
348
+
349
+ # Sort by multiple columns
350
+ df.sort("department", "age")
351
+
352
+ # Mixed sorting order
353
+ df.sort(["department", "salary"], descending=[False, True])
354
+ ```
355
+
356
+ ### Advanced Sorting
357
+
358
+ **Null handling:**
359
+ ```python
360
+ # Nulls first
361
+ df.sort("value", nulls_last=False)
362
+
363
+ # Nulls last
364
+ df.sort("value", nulls_last=True)
365
+ ```
366
+
367
+ **Sort by expression:**
368
+ ```python
369
+ # Sort by computed value
370
+ df.sort(pl.col("first_name").str.len())
371
+
372
+ # Sort by multiple expressions
373
+ df.sort(
374
+ pl.col("last_name").str.to_lowercase(),
375
+ pl.col("age").abs()
376
+ )
377
+ ```
378
+
379
+ ## Conditional Operations
380
+
381
+ ### When/Then/Otherwise
382
+
383
+ ```python
384
+ # Basic conditional
385
+ df.with_columns(
386
+ status=pl.when(pl.col("age") >= 18)
387
+ .then("adult")
388
+ .otherwise("minor")
389
+ )
390
+
391
+ # Multiple conditions
392
+ df.with_columns(
393
+ category=pl.when(pl.col("score") >= 90)
394
+ .then("A")
395
+ .when(pl.col("score") >= 80)
396
+ .then("B")
397
+ .when(pl.col("score") >= 70)
398
+ .then("C")
399
+ .otherwise("F")
400
+ )
401
+
402
+ # Conditional computation
403
+ df.with_columns(
404
+ adjusted_price=pl.when(pl.col("is_member"))
405
+ .then(pl.col("price") * 0.9)
406
+ .otherwise(pl.col("price"))
407
+ )
408
+ ```
409
+
410
+ ## String Operations
411
+
412
+ ### Common String Methods
413
+
414
+ ```python
415
+ df.with_columns(
416
+ # Case conversion
417
+ upper=pl.col("name").str.to_uppercase(),
418
+ lower=pl.col("name").str.to_lowercase(),
419
+ title=pl.col("name").str.to_titlecase(),
420
+
421
+ # Trimming
422
+ trimmed=pl.col("text").str.strip_chars(),
423
+
424
+ # Substring
425
+ first_3=pl.col("name").str.slice(0, 3),
426
+
427
+ # Replace
428
+ cleaned=pl.col("text").str.replace("old", "new"),
429
+ cleaned_all=pl.col("text").str.replace_all("old", "new"),
430
+
431
+ # Split
432
+ parts=pl.col("full_name").str.split(" "),
433
+
434
+ # Length
435
+ name_length=pl.col("name").str.len_chars()
436
+ )
437
+ ```
438
+
439
+ ### String Filtering
440
+
441
+ ```python
442
+ # Contains
443
+ df.filter(pl.col("email").str.contains("@gmail.com"))
444
+
445
+ # Starts/ends with
446
+ df.filter(pl.col("name").str.starts_with("A"))
447
+ df.filter(pl.col("file").str.ends_with(".csv"))
448
+
449
+ # Regex matching
450
+ df.filter(pl.col("phone").str.contains(r"^\d{3}-\d{4}$"))
451
+ ```
452
+
453
+ ## Date and Time Operations
454
+
455
+ ### Date Parsing
456
+
457
+ ```python
458
+ # Parse strings to dates
459
+ df.with_columns(
460
+ date=pl.col("date_str").str.strptime(pl.Date, "%Y-%m-%d"),
461
+ datetime=pl.col("dt_str").str.strptime(pl.Datetime, "%Y-%m-%d %H:%M:%S")
462
+ )
463
+ ```
464
+
465
+ ### Date Components
466
+
467
+ ```python
468
+ df.with_columns(
469
+ year=pl.col("date").dt.year(),
470
+ month=pl.col("date").dt.month(),
471
+ day=pl.col("date").dt.day(),
472
+ weekday=pl.col("date").dt.weekday(),
473
+ hour=pl.col("datetime").dt.hour(),
474
+ minute=pl.col("datetime").dt.minute()
475
+ )
476
+ ```
477
+
478
+ ### Date Arithmetic
479
+
480
+ ```python
481
+ # Add duration
482
+ df.with_columns(
483
+ next_week=pl.col("date") + pl.duration(weeks=1),
484
+ next_month=pl.col("date") + pl.duration(months=1)
485
+ )
486
+
487
+ # Difference between dates
488
+ df.with_columns(
489
+ days_diff=(pl.col("end_date") - pl.col("start_date")).dt.total_days()
490
+ )
491
+ ```
492
+
493
+ ### Date Filtering
494
+
495
+ ```python
496
+ # Filter by date range
497
+ df.filter(
498
+ pl.col("date").is_between(pl.date(2023, 1, 1), pl.date(2023, 12, 31))
499
+ )
500
+
501
+ # Filter by year
502
+ df.filter(pl.col("date").dt.year() == 2023)
503
+
504
+ # Filter by month
505
+ df.filter(pl.col("date").dt.month().is_in([6, 7, 8])) # Summer months
506
+ ```
507
+
508
+ ## List Operations
509
+
510
+ ### Working with List Columns
511
+
512
+ ```python
513
+ # Create list column
514
+ df.with_columns(
515
+ items_list=pl.col("item1", "item2", "item3").to_list()
516
+ )
517
+
518
+ # List operations
519
+ df.with_columns(
520
+ list_len=pl.col("items").list.len(),
521
+ first_item=pl.col("items").list.first(),
522
+ last_item=pl.col("items").list.last(),
523
+ unique_items=pl.col("items").list.unique(),
524
+ sorted_items=pl.col("items").list.sort()
525
+ )
526
+
527
+ # Explode lists to rows
528
+ df.explode("items")
529
+
530
+ # Filter list elements
531
+ df.with_columns(
532
+ filtered=pl.col("items").list.eval(pl.element() > 10)
533
+ )
534
+ ```
535
+
536
+ ## Struct Operations
537
+
538
+ ### Working with Nested Structures
539
+
540
+ ```python
541
+ # Create struct column
542
+ df.with_columns(
543
+ address=pl.struct(["street", "city", "zip"])
544
+ )
545
+
546
+ # Access struct fields
547
+ df.with_columns(
548
+ city=pl.col("address").struct.field("city")
549
+ )
550
+
551
+ # Unnest struct to columns
552
+ df.unnest("address")
553
+ ```
554
+
555
+ ## Unique and Duplicate Operations
556
+
557
+ ```python
558
+ # Get unique rows
559
+ df.unique()
560
+
561
+ # Unique on specific columns
562
+ df.unique(subset=["name", "email"])
563
+
564
+ # Keep first/last duplicate
565
+ df.unique(subset=["id"], keep="first")
566
+ df.unique(subset=["id"], keep="last")
567
+
568
+ # Identify duplicates
569
+ df.with_columns(
570
+ is_duplicate=pl.col("id").is_duplicated()
571
+ )
572
+
573
+ # Count duplicates
574
+ df.group_by("email").agg(
575
+ pl.len().alias("count")
576
+ ).filter(pl.col("count") > 1)
577
+ ```
578
+
579
+ ## Sampling
580
+
581
+ ```python
582
+ # Random sample
583
+ df.sample(n=100)
584
+
585
+ # Sample fraction
586
+ df.sample(fraction=0.1)
587
+
588
+ # Sample with seed for reproducibility
589
+ df.sample(n=100, seed=42)
590
+ ```
591
+
592
+ ## Column Renaming
593
+
594
+ ```python
595
+ # Rename specific columns
596
+ df.rename({"old_name": "new_name", "age": "years"})
597
+
598
+ # Rename with expression
599
+ df.select(pl.col("*").name.suffix("_renamed"))
600
+ df.select(pl.col("*").name.prefix("data_"))
601
+ df.select(pl.col("*").name.to_uppercase())
602
+ ```