@synsci/cli-darwin-x64-baseline 1.1.76 → 1.1.78
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/bin/skills/adaptyv/SKILL.md +114 -0
- package/bin/skills/adaptyv/reference/api_reference.md +308 -0
- package/bin/skills/adaptyv/reference/examples.md +913 -0
- package/bin/skills/adaptyv/reference/experiments.md +360 -0
- package/bin/skills/adaptyv/reference/protein_optimization.md +637 -0
- package/bin/skills/aeon/SKILL.md +374 -0
- package/bin/skills/aeon/references/anomaly_detection.md +154 -0
- package/bin/skills/aeon/references/classification.md +144 -0
- package/bin/skills/aeon/references/clustering.md +123 -0
- package/bin/skills/aeon/references/datasets_benchmarking.md +387 -0
- package/bin/skills/aeon/references/distances.md +256 -0
- package/bin/skills/aeon/references/forecasting.md +140 -0
- package/bin/skills/aeon/references/networks.md +289 -0
- package/bin/skills/aeon/references/regression.md +118 -0
- package/bin/skills/aeon/references/segmentation.md +163 -0
- package/bin/skills/aeon/references/similarity_search.md +187 -0
- package/bin/skills/aeon/references/transformations.md +246 -0
- package/bin/skills/alphafold-database/SKILL.md +513 -0
- package/bin/skills/alphafold-database/references/api_reference.md +423 -0
- package/bin/skills/anndata/SKILL.md +400 -0
- package/bin/skills/anndata/references/best_practices.md +525 -0
- package/bin/skills/anndata/references/concatenation.md +396 -0
- package/bin/skills/anndata/references/data_structure.md +314 -0
- package/bin/skills/anndata/references/io_operations.md +404 -0
- package/bin/skills/anndata/references/manipulation.md +516 -0
- package/bin/skills/arboreto/SKILL.md +243 -0
- package/bin/skills/arboreto/references/algorithms.md +138 -0
- package/bin/skills/arboreto/references/basic_inference.md +151 -0
- package/bin/skills/arboreto/references/distributed_computing.md +242 -0
- package/bin/skills/arboreto/scripts/basic_grn_inference.py +97 -0
- package/bin/skills/astropy/SKILL.md +331 -0
- package/bin/skills/astropy/references/coordinates.md +273 -0
- package/bin/skills/astropy/references/cosmology.md +307 -0
- package/bin/skills/astropy/references/fits.md +396 -0
- package/bin/skills/astropy/references/tables.md +489 -0
- package/bin/skills/astropy/references/time.md +404 -0
- package/bin/skills/astropy/references/units.md +178 -0
- package/bin/skills/astropy/references/wcs_and_other_modules.md +373 -0
- package/bin/skills/benchling-integration/SKILL.md +480 -0
- package/bin/skills/benchling-integration/references/api_endpoints.md +883 -0
- package/bin/skills/benchling-integration/references/authentication.md +379 -0
- package/bin/skills/benchling-integration/references/sdk_reference.md +774 -0
- package/bin/skills/biopython/SKILL.md +443 -0
- package/bin/skills/biopython/references/advanced.md +577 -0
- package/bin/skills/biopython/references/alignment.md +362 -0
- package/bin/skills/biopython/references/blast.md +455 -0
- package/bin/skills/biopython/references/databases.md +484 -0
- package/bin/skills/biopython/references/phylogenetics.md +566 -0
- package/bin/skills/biopython/references/sequence_io.md +285 -0
- package/bin/skills/biopython/references/structure.md +564 -0
- package/bin/skills/biorxiv-database/SKILL.md +483 -0
- package/bin/skills/biorxiv-database/references/api_reference.md +280 -0
- package/bin/skills/biorxiv-database/scripts/biorxiv_search.py +445 -0
- package/bin/skills/bioservices/SKILL.md +361 -0
- package/bin/skills/bioservices/references/identifier_mapping.md +685 -0
- package/bin/skills/bioservices/references/services_reference.md +636 -0
- package/bin/skills/bioservices/references/workflow_patterns.md +811 -0
- package/bin/skills/bioservices/scripts/batch_id_converter.py +347 -0
- package/bin/skills/bioservices/scripts/compound_cross_reference.py +378 -0
- package/bin/skills/bioservices/scripts/pathway_analysis.py +309 -0
- package/bin/skills/bioservices/scripts/protein_analysis_workflow.py +408 -0
- package/bin/skills/brenda-database/SKILL.md +719 -0
- package/bin/skills/brenda-database/references/api_reference.md +537 -0
- package/bin/skills/brenda-database/scripts/brenda_queries.py +844 -0
- package/bin/skills/brenda-database/scripts/brenda_visualization.py +772 -0
- package/bin/skills/brenda-database/scripts/enzyme_pathway_builder.py +1053 -0
- package/bin/skills/cellxgene-census/SKILL.md +511 -0
- package/bin/skills/cellxgene-census/references/census_schema.md +182 -0
- package/bin/skills/cellxgene-census/references/common_patterns.md +351 -0
- package/bin/skills/chembl-database/SKILL.md +389 -0
- package/bin/skills/chembl-database/references/api_reference.md +272 -0
- package/bin/skills/chembl-database/scripts/example_queries.py +278 -0
- package/bin/skills/cirq/SKILL.md +346 -0
- package/bin/skills/cirq/references/building.md +307 -0
- package/bin/skills/cirq/references/experiments.md +572 -0
- package/bin/skills/cirq/references/hardware.md +515 -0
- package/bin/skills/cirq/references/noise.md +515 -0
- package/bin/skills/cirq/references/simulation.md +350 -0
- package/bin/skills/cirq/references/transformation.md +416 -0
- package/bin/skills/clinicaltrials-database/SKILL.md +507 -0
- package/bin/skills/clinicaltrials-database/references/api_reference.md +358 -0
- package/bin/skills/clinicaltrials-database/scripts/query_clinicaltrials.py +215 -0
- package/bin/skills/clinpgx-database/SKILL.md +638 -0
- package/bin/skills/clinpgx-database/references/api_reference.md +757 -0
- package/bin/skills/clinpgx-database/scripts/query_clinpgx.py +518 -0
- package/bin/skills/clinvar-database/SKILL.md +362 -0
- package/bin/skills/clinvar-database/references/api_reference.md +227 -0
- package/bin/skills/clinvar-database/references/clinical_significance.md +218 -0
- package/bin/skills/clinvar-database/references/data_formats.md +358 -0
- package/bin/skills/cobrapy/SKILL.md +463 -0
- package/bin/skills/cobrapy/references/api_quick_reference.md +655 -0
- package/bin/skills/cobrapy/references/workflows.md +593 -0
- package/bin/skills/cosmic-database/SKILL.md +336 -0
- package/bin/skills/cosmic-database/references/cosmic_data_reference.md +220 -0
- package/bin/skills/cosmic-database/scripts/download_cosmic.py +231 -0
- package/bin/skills/dask/SKILL.md +456 -0
- package/bin/skills/dask/references/arrays.md +497 -0
- package/bin/skills/dask/references/bags.md +468 -0
- package/bin/skills/dask/references/best-practices.md +277 -0
- package/bin/skills/dask/references/dataframes.md +368 -0
- package/bin/skills/dask/references/futures.md +541 -0
- package/bin/skills/dask/references/schedulers.md +504 -0
- package/bin/skills/datacommons-client/SKILL.md +255 -0
- package/bin/skills/datacommons-client/references/getting_started.md +417 -0
- package/bin/skills/datacommons-client/references/node.md +250 -0
- package/bin/skills/datacommons-client/references/observation.md +185 -0
- package/bin/skills/datacommons-client/references/resolve.md +246 -0
- package/bin/skills/datamol/SKILL.md +706 -0
- package/bin/skills/datamol/references/conformers_module.md +131 -0
- package/bin/skills/datamol/references/core_api.md +130 -0
- package/bin/skills/datamol/references/descriptors_viz.md +195 -0
- package/bin/skills/datamol/references/fragments_scaffolds.md +174 -0
- package/bin/skills/datamol/references/io_module.md +109 -0
- package/bin/skills/datamol/references/reactions_data.md +218 -0
- package/bin/skills/deepchem/SKILL.md +597 -0
- package/bin/skills/deepchem/references/api_reference.md +303 -0
- package/bin/skills/deepchem/references/workflows.md +491 -0
- package/bin/skills/deepchem/scripts/graph_neural_network.py +338 -0
- package/bin/skills/deepchem/scripts/predict_solubility.py +224 -0
- package/bin/skills/deepchem/scripts/transfer_learning.py +375 -0
- package/bin/skills/deeptools/SKILL.md +531 -0
- package/bin/skills/deeptools/assets/quick_reference.md +58 -0
- package/bin/skills/deeptools/references/effective_genome_sizes.md +116 -0
- package/bin/skills/deeptools/references/normalization_methods.md +410 -0
- package/bin/skills/deeptools/references/tools_reference.md +533 -0
- package/bin/skills/deeptools/references/workflows.md +474 -0
- package/bin/skills/deeptools/scripts/validate_files.py +195 -0
- package/bin/skills/deeptools/scripts/workflow_generator.py +454 -0
- package/bin/skills/denario/SKILL.md +215 -0
- package/bin/skills/denario/references/examples.md +494 -0
- package/bin/skills/denario/references/installation.md +213 -0
- package/bin/skills/denario/references/llm_configuration.md +265 -0
- package/bin/skills/denario/references/research_pipeline.md +471 -0
- package/bin/skills/diffdock/SKILL.md +483 -0
- package/bin/skills/diffdock/assets/batch_template.csv +4 -0
- package/bin/skills/diffdock/assets/custom_inference_config.yaml +90 -0
- package/bin/skills/diffdock/references/confidence_and_limitations.md +182 -0
- package/bin/skills/diffdock/references/parameters_reference.md +163 -0
- package/bin/skills/diffdock/references/workflows_examples.md +392 -0
- package/bin/skills/diffdock/scripts/analyze_results.py +334 -0
- package/bin/skills/diffdock/scripts/prepare_batch_csv.py +254 -0
- package/bin/skills/diffdock/scripts/setup_check.py +278 -0
- package/bin/skills/dnanexus-integration/SKILL.md +383 -0
- package/bin/skills/dnanexus-integration/references/app-development.md +247 -0
- package/bin/skills/dnanexus-integration/references/configuration.md +646 -0
- package/bin/skills/dnanexus-integration/references/data-operations.md +400 -0
- package/bin/skills/dnanexus-integration/references/job-execution.md +412 -0
- package/bin/skills/dnanexus-integration/references/python-sdk.md +523 -0
- package/bin/skills/document-skills/docx/LICENSE.txt +30 -0
- package/bin/skills/document-skills/docx/SKILL.md +233 -0
- package/bin/skills/document-skills/docx/docx-js.md +350 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chart.xsd +1499 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chartDrawing.xsd +146 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-diagram.xsd +1085 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-lockedCanvas.xsd +11 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-main.xsd +3081 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-picture.xsd +23 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-spreadsheetDrawing.xsd +185 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-wordprocessingDrawing.xsd +287 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/pml.xsd +1676 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-additionalCharacteristics.xsd +28 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-bibliography.xsd +144 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-commonSimpleTypes.xsd +174 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-customXmlDataProperties.xsd +25 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-customXmlSchemaProperties.xsd +18 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesCustom.xsd +59 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesExtended.xsd +56 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesVariantTypes.xsd +195 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-math.xsd +582 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-relationshipReference.xsd +25 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/sml.xsd +4439 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-main.xsd +570 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-officeDrawing.xsd +509 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-presentationDrawing.xsd +12 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-spreadsheetDrawing.xsd +108 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-wordprocessingDrawing.xsd +96 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/wml.xsd +3646 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/xml.xsd +116 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-contentTypes.xsd +42 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-coreProperties.xsd +50 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-digSig.xsd +49 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-relationships.xsd +33 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/mce/mc.xsd +75 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/microsoft/wml-2010.xsd +560 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/microsoft/wml-2012.xsd +67 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/microsoft/wml-2018.xsd +14 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/microsoft/wml-cex-2018.xsd +20 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/microsoft/wml-cid-2016.xsd +13 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/microsoft/wml-sdtdatahash-2020.xsd +4 -0
- package/bin/skills/document-skills/docx/ooxml/schemas/microsoft/wml-symex-2015.xsd +8 -0
- package/bin/skills/document-skills/docx/ooxml/scripts/pack.py +159 -0
- package/bin/skills/document-skills/docx/ooxml/scripts/unpack.py +29 -0
- package/bin/skills/document-skills/docx/ooxml/scripts/validate.py +69 -0
- package/bin/skills/document-skills/docx/ooxml/scripts/validation/__init__.py +15 -0
- package/bin/skills/document-skills/docx/ooxml/scripts/validation/base.py +951 -0
- package/bin/skills/document-skills/docx/ooxml/scripts/validation/docx.py +274 -0
- package/bin/skills/document-skills/docx/ooxml/scripts/validation/pptx.py +315 -0
- package/bin/skills/document-skills/docx/ooxml/scripts/validation/redlining.py +279 -0
- package/bin/skills/document-skills/docx/ooxml.md +610 -0
- package/bin/skills/document-skills/docx/scripts/__init__.py +1 -0
- package/bin/skills/document-skills/docx/scripts/document.py +1276 -0
- package/bin/skills/document-skills/docx/scripts/templates/comments.xml +3 -0
- package/bin/skills/document-skills/docx/scripts/templates/commentsExtended.xml +3 -0
- package/bin/skills/document-skills/docx/scripts/templates/commentsExtensible.xml +3 -0
- package/bin/skills/document-skills/docx/scripts/templates/commentsIds.xml +3 -0
- package/bin/skills/document-skills/docx/scripts/templates/people.xml +3 -0
- package/bin/skills/document-skills/docx/scripts/utilities.py +374 -0
- package/bin/skills/document-skills/pdf/LICENSE.txt +30 -0
- package/bin/skills/document-skills/pdf/SKILL.md +330 -0
- package/bin/skills/document-skills/pdf/forms.md +205 -0
- package/bin/skills/document-skills/pdf/reference.md +612 -0
- package/bin/skills/document-skills/pdf/scripts/check_bounding_boxes.py +70 -0
- package/bin/skills/document-skills/pdf/scripts/check_bounding_boxes_test.py +226 -0
- package/bin/skills/document-skills/pdf/scripts/check_fillable_fields.py +12 -0
- package/bin/skills/document-skills/pdf/scripts/convert_pdf_to_images.py +35 -0
- package/bin/skills/document-skills/pdf/scripts/create_validation_image.py +41 -0
- package/bin/skills/document-skills/pdf/scripts/extract_form_field_info.py +152 -0
- package/bin/skills/document-skills/pdf/scripts/fill_fillable_fields.py +114 -0
- package/bin/skills/document-skills/pdf/scripts/fill_pdf_form_with_annotations.py +108 -0
- package/bin/skills/document-skills/pptx/LICENSE.txt +30 -0
- package/bin/skills/document-skills/pptx/SKILL.md +520 -0
- package/bin/skills/document-skills/pptx/html2pptx.md +625 -0
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## Overview
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The Patent Examination Data System (PEDS) provides access to USPTO patent application and filing status records. It contains bibliographic data, published document information, and patent term extension data.
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**Data Coverage:** 1981 to present (some data back to 1935)
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**Base URL:** Access through USPTO Open Data Portal
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## What PEDS Provides
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- **Bibliographic data** - Application numbers, filing dates, titles, inventors, assignees
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- **Transaction history** - All examination events with dates, codes, and descriptions
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## Python Library: uspto-opendata-python
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+
# Initialize client
|
|
46
|
+
client = PEDSClient()
|
|
47
|
+
|
|
48
|
+
# Search by application number
|
|
49
|
+
app_number = "16123456"
|
|
50
|
+
result = client.get_application(app_number)
|
|
51
|
+
|
|
52
|
+
# Access application data
|
|
53
|
+
print(f"Title: {result['title']}")
|
|
54
|
+
print(f"Filing Date: {result['filing_date']}")
|
|
55
|
+
print(f"Status: {result['status']}")
|
|
56
|
+
|
|
57
|
+
# Get transaction history
|
|
58
|
+
transactions = result['transactions']
|
|
59
|
+
for trans in transactions:
|
|
60
|
+
print(f"{trans['date']}: {trans['code']} - {trans['description']}")
|
|
61
|
+
```
|
|
62
|
+
|
|
63
|
+
### Search Methods
|
|
64
|
+
|
|
65
|
+
```python
|
|
66
|
+
# By application number
|
|
67
|
+
client.get_application("16123456")
|
|
68
|
+
|
|
69
|
+
# By patent number
|
|
70
|
+
client.get_patent("11234567")
|
|
71
|
+
|
|
72
|
+
# By customer number (assignee)
|
|
73
|
+
client.search_by_customer_number("12345")
|
|
74
|
+
|
|
75
|
+
# Bulk retrieval
|
|
76
|
+
app_numbers = ["16123456", "16123457", "16123458"]
|
|
77
|
+
results = client.bulk_retrieve(app_numbers)
|
|
78
|
+
```
|
|
79
|
+
|
|
80
|
+
## Data Fields
|
|
81
|
+
|
|
82
|
+
### Bibliographic Fields
|
|
83
|
+
|
|
84
|
+
- `application_number` - Application number
|
|
85
|
+
- `filing_date` - Filing date
|
|
86
|
+
- `patent_number` - Patent number (if granted)
|
|
87
|
+
- `patent_issue_date` - Issue date (if granted)
|
|
88
|
+
- `title` - Application/patent title
|
|
89
|
+
- `inventors` - List of inventors
|
|
90
|
+
- `assignees` - List of assignees
|
|
91
|
+
- `app_type` - Application type (utility, design, plant, reissue)
|
|
92
|
+
- `app_status` - Current application status
|
|
93
|
+
- `app_status_date` - Status date
|
|
94
|
+
|
|
95
|
+
### Transaction Fields
|
|
96
|
+
|
|
97
|
+
- `transaction_date` - Date of transaction
|
|
98
|
+
- `transaction_code` - USPTO event code
|
|
99
|
+
- `transaction_description` - Description of event
|
|
100
|
+
- `mail_date` - Mail room date (for office actions)
|
|
101
|
+
|
|
102
|
+
### Patent Term Data
|
|
103
|
+
|
|
104
|
+
- `pta_pte_summary` - Patent term adjustment/extension summary
|
|
105
|
+
- `pta_pte_history` - History of term calculations
|
|
106
|
+
|
|
107
|
+
## Status Codes
|
|
108
|
+
|
|
109
|
+
Common application status codes:
|
|
110
|
+
|
|
111
|
+
- **Patented Case** - Patent has been granted
|
|
112
|
+
- **Abandoned** - Application is abandoned
|
|
113
|
+
- **Pending** - Application is under examination
|
|
114
|
+
- **Allowed** - Application has been allowed, awaiting issue
|
|
115
|
+
- **Final Rejection** - Final rejection issued
|
|
116
|
+
- **Non-Final Rejection** - Non-final rejection issued
|
|
117
|
+
- **Response Filed** - Applicant response filed
|
|
118
|
+
|
|
119
|
+
## Transaction Codes
|
|
120
|
+
|
|
121
|
+
Common transaction codes include:
|
|
122
|
+
|
|
123
|
+
- **CTNF** - Non-final rejection mailed
|
|
124
|
+
- **CTFR** - Final rejection mailed
|
|
125
|
+
- **AOPF** - Office action mailed
|
|
126
|
+
- **WRIT** - Response filed
|
|
127
|
+
- **NOA** - Notice of allowance mailed
|
|
128
|
+
- **ISS.FEE** - Issue fee payment
|
|
129
|
+
- **ABND** - Application abandoned
|
|
130
|
+
|
|
131
|
+
Full code list available in OCE Patent Examination Status/Event Codes API.
|
|
132
|
+
|
|
133
|
+
## Use Cases
|
|
134
|
+
|
|
135
|
+
### 1. Track Application Progress
|
|
136
|
+
|
|
137
|
+
Monitor pending applications for office actions and status changes.
|
|
138
|
+
|
|
139
|
+
```python
|
|
140
|
+
# Get current status
|
|
141
|
+
app = client.get_application("16123456")
|
|
142
|
+
print(f"Current status: {app['app_status']}")
|
|
143
|
+
print(f"Status date: {app['app_status_date']}")
|
|
144
|
+
|
|
145
|
+
# Check for recent office actions
|
|
146
|
+
recent_oas = [t for t in app['transactions']
|
|
147
|
+
if t['code'] in ['CTNF', 'CTFR', 'AOPF']
|
|
148
|
+
and t['date'] > '2024-01-01']
|
|
149
|
+
```
|
|
150
|
+
|
|
151
|
+
### 2. Portfolio Analysis
|
|
152
|
+
|
|
153
|
+
Analyze prosecution history across a portfolio.
|
|
154
|
+
|
|
155
|
+
```python
|
|
156
|
+
# Get all applications for an assignee
|
|
157
|
+
apps = client.search_by_customer_number("12345")
|
|
158
|
+
|
|
159
|
+
# Calculate average pendency
|
|
160
|
+
pendencies = []
|
|
161
|
+
for app in apps:
|
|
162
|
+
if app['patent_issue_date']:
|
|
163
|
+
filing = datetime.strptime(app['filing_date'], '%Y-%m-%d')
|
|
164
|
+
issue = datetime.strptime(app['patent_issue_date'], '%Y-%m-%d')
|
|
165
|
+
pendencies.append((issue - filing).days)
|
|
166
|
+
|
|
167
|
+
avg_pendency = sum(pendencies) / len(pendencies)
|
|
168
|
+
print(f"Average pendency: {avg_pendency} days")
|
|
169
|
+
```
|
|
170
|
+
|
|
171
|
+
### 3. Examine Rejection Patterns
|
|
172
|
+
|
|
173
|
+
Analyze types of rejections received.
|
|
174
|
+
|
|
175
|
+
```python
|
|
176
|
+
# Count rejection types
|
|
177
|
+
rejections = {}
|
|
178
|
+
for trans in app['transactions']:
|
|
179
|
+
if 'rejection' in trans['description'].lower():
|
|
180
|
+
code = trans['code']
|
|
181
|
+
rejections[code] = rejections.get(code, 0) + 1
|
|
182
|
+
```
|
|
183
|
+
|
|
184
|
+
## Integration with Other APIs
|
|
185
|
+
|
|
186
|
+
PEDS data can be combined with other USPTO APIs:
|
|
187
|
+
|
|
188
|
+
- **Office Action Text API** - Retrieve full text of office actions using application number
|
|
189
|
+
- **Patent Assignment Search** - Find ownership changes
|
|
190
|
+
- **PTAB API** - Check for appeal proceedings
|
|
191
|
+
|
|
192
|
+
## Important Notes
|
|
193
|
+
|
|
194
|
+
1. **PAIR Bulk Data (PBD) is decommissioned** - Use PEDS instead
|
|
195
|
+
2. **Data updates** - PEDS is updated regularly but may have 1-2 day lag
|
|
196
|
+
3. **Application numbers** - Use standardized format (no slashes or spaces)
|
|
197
|
+
4. **Continuity data** - Parent/child applications tracked in transaction history
|
|
198
|
+
|
|
199
|
+
## Best Practices
|
|
200
|
+
|
|
201
|
+
1. **Batch requests** - Use bulk retrieval for multiple applications
|
|
202
|
+
2. **Cache data** - Avoid redundant API calls for same application
|
|
203
|
+
3. **Monitor updates** - Check for transaction updates regularly
|
|
204
|
+
4. **Handle missing data** - Not all fields populated for all applications
|
|
205
|
+
5. **Parse transaction codes** - Use code descriptions for user-friendly display
|
|
206
|
+
|
|
207
|
+
## Resources
|
|
208
|
+
|
|
209
|
+
- **Library Documentation**: https://docs.ip-tools.org/uspto-opendata-python/
|
|
210
|
+
- **PyPI Package**: https://pypi.org/project/uspto-opendata-python/
|
|
211
|
+
- **GitHub Repository**: https://github.com/ip-tools/uspto-opendata-python
|
|
212
|
+
- **USPTO PEDS Portal**: https://ped.uspto.gov/
|
|
@@ -0,0 +1,358 @@
|
|
|
1
|
+
# USPTO Trademark APIs Reference
|
|
2
|
+
|
|
3
|
+
## Overview
|
|
4
|
+
|
|
5
|
+
USPTO provides two main APIs for trademark data:
|
|
6
|
+
|
|
7
|
+
1. **Trademark Status & Document Retrieval (TSDR)** - Retrieve trademark case status and documents
|
|
8
|
+
2. **Trademark Assignment Search** - Search trademark assignment records
|
|
9
|
+
|
|
10
|
+
## 1. Trademark Status & Document Retrieval (TSDR) API
|
|
11
|
+
|
|
12
|
+
### Overview
|
|
13
|
+
|
|
14
|
+
TSDR enables programmatic retrieval of trademark case status documents and information.
|
|
15
|
+
|
|
16
|
+
**API Version:** v1.0
|
|
17
|
+
|
|
18
|
+
**Base URL:** `https://tsdrapi.uspto.gov/ts/cd/`
|
|
19
|
+
|
|
20
|
+
### Authentication
|
|
21
|
+
|
|
22
|
+
Requires API key registration at: https://account.uspto.gov/api-manager/
|
|
23
|
+
|
|
24
|
+
Include API key in request header:
|
|
25
|
+
```
|
|
26
|
+
X-Api-Key: YOUR_API_KEY
|
|
27
|
+
```
|
|
28
|
+
|
|
29
|
+
### Endpoints
|
|
30
|
+
|
|
31
|
+
#### Get Trademark Status by Serial Number
|
|
32
|
+
|
|
33
|
+
```
|
|
34
|
+
GET /ts/cd/casedocs/sn{serial_number}/info.json
|
|
35
|
+
```
|
|
36
|
+
|
|
37
|
+
**Example:**
|
|
38
|
+
```bash
|
|
39
|
+
curl -H "X-Api-Key: YOUR_KEY" \
|
|
40
|
+
"https://tsdrapi.uspto.gov/ts/cd/casedocs/sn87654321/info.json"
|
|
41
|
+
```
|
|
42
|
+
|
|
43
|
+
#### Get Trademark Status by Registration Number
|
|
44
|
+
|
|
45
|
+
```
|
|
46
|
+
GET /ts/cd/casedocs/rn{registration_number}/info.json
|
|
47
|
+
```
|
|
48
|
+
|
|
49
|
+
### Response Format
|
|
50
|
+
|
|
51
|
+
Returns JSON with comprehensive trademark information:
|
|
52
|
+
|
|
53
|
+
```json
|
|
54
|
+
{
|
|
55
|
+
"TradeMarkAppln": {
|
|
56
|
+
"ApplicationNumber": "87654321",
|
|
57
|
+
"ApplicationDate": "2017-10-15",
|
|
58
|
+
"RegistrationNumber": "5678901",
|
|
59
|
+
"RegistrationDate": "2019-03-12",
|
|
60
|
+
"MarkVerbalElementText": "EXAMPLE MARK",
|
|
61
|
+
"MarkCurrentStatusExternalDescriptionText": "REGISTERED",
|
|
62
|
+
"MarkCurrentStatusDate": "2019-03-12",
|
|
63
|
+
"GoodsAndServices": [...],
|
|
64
|
+
"Owners": [...],
|
|
65
|
+
"Correspondents": [...]
|
|
66
|
+
}
|
|
67
|
+
}
|
|
68
|
+
```
|
|
69
|
+
|
|
70
|
+
### Key Data Fields
|
|
71
|
+
|
|
72
|
+
- **Application Information:**
|
|
73
|
+
- `ApplicationNumber` - Serial number
|
|
74
|
+
- `ApplicationDate` - Filing date
|
|
75
|
+
- `ApplicationType` - Type (TEAS Plus, TEAS Standard, etc.)
|
|
76
|
+
|
|
77
|
+
- **Registration Information:**
|
|
78
|
+
- `RegistrationNumber` - Registration number (if registered)
|
|
79
|
+
- `RegistrationDate` - Registration date
|
|
80
|
+
|
|
81
|
+
- **Mark Information:**
|
|
82
|
+
- `MarkVerbalElementText` - Text of the mark
|
|
83
|
+
- `MarkCurrentStatusExternalDescriptionText` - Current status
|
|
84
|
+
- `MarkCurrentStatusDate` - Status date
|
|
85
|
+
- `MarkDrawingCode` - Type of mark (words, design, etc.)
|
|
86
|
+
|
|
87
|
+
- **Classification:**
|
|
88
|
+
- `GoodsAndServices` - Array of goods/services with classes
|
|
89
|
+
|
|
90
|
+
- **Owner Information:**
|
|
91
|
+
- `Owners` - Array of trademark owners/applicants
|
|
92
|
+
|
|
93
|
+
- **Prosecution History:**
|
|
94
|
+
- `ProsecutionHistoryEntry` - Array of events in prosecution
|
|
95
|
+
|
|
96
|
+
### Common Status Values
|
|
97
|
+
|
|
98
|
+
- **REGISTERED** - Mark is registered and active
|
|
99
|
+
- **PENDING** - Application under examination
|
|
100
|
+
- **ABANDONED** - Application/registration abandoned
|
|
101
|
+
- **CANCELLED** - Registration cancelled
|
|
102
|
+
- **SUSPENDED** - Examination suspended
|
|
103
|
+
- **PUBLISHED FOR OPPOSITION** - Published, in opposition period
|
|
104
|
+
- **REGISTERED AND RENEWED** - Registration renewed
|
|
105
|
+
|
|
106
|
+
### Python Example
|
|
107
|
+
|
|
108
|
+
```python
|
|
109
|
+
import requests
|
|
110
|
+
|
|
111
|
+
def get_trademark_status(serial_number, api_key):
|
|
112
|
+
"""Retrieve trademark status by serial number."""
|
|
113
|
+
url = f"https://tsdrapi.uspto.gov/ts/cd/casedocs/sn{serial_number}/info.json"
|
|
114
|
+
headers = {"X-Api-Key": api_key}
|
|
115
|
+
|
|
116
|
+
response = requests.get(url, headers=headers)
|
|
117
|
+
if response.status_code == 200:
|
|
118
|
+
return response.json()
|
|
119
|
+
else:
|
|
120
|
+
raise Exception(f"API error: {response.status_code}")
|
|
121
|
+
|
|
122
|
+
# Usage
|
|
123
|
+
data = get_trademark_status("87654321", "YOUR_API_KEY")
|
|
124
|
+
trademark = data['TradeMarkAppln']
|
|
125
|
+
|
|
126
|
+
print(f"Mark: {trademark['MarkVerbalElementText']}")
|
|
127
|
+
print(f"Status: {trademark['MarkCurrentStatusExternalDescriptionText']}")
|
|
128
|
+
print(f"Application Date: {trademark['ApplicationDate']}")
|
|
129
|
+
if 'RegistrationNumber' in trademark:
|
|
130
|
+
print(f"Registration #: {trademark['RegistrationNumber']}")
|
|
131
|
+
```
|
|
132
|
+
|
|
133
|
+
## 2. Trademark Assignment Search API
|
|
134
|
+
|
|
135
|
+
### Overview
|
|
136
|
+
|
|
137
|
+
Retrieves trademark assignment records from the USPTO assignment database. Shows ownership transfers and security interests.
|
|
138
|
+
|
|
139
|
+
**API Version:** v1.4
|
|
140
|
+
|
|
141
|
+
**Base URL:** `https://assignment-api.uspto.gov/trademark/`
|
|
142
|
+
|
|
143
|
+
### Authentication
|
|
144
|
+
|
|
145
|
+
Requires API key in header:
|
|
146
|
+
```
|
|
147
|
+
X-Api-Key: YOUR_API_KEY
|
|
148
|
+
```
|
|
149
|
+
|
|
150
|
+
### Search Methods
|
|
151
|
+
|
|
152
|
+
#### By Registration Number
|
|
153
|
+
|
|
154
|
+
```
|
|
155
|
+
GET /v1.4/assignment/application/{registration_number}
|
|
156
|
+
```
|
|
157
|
+
|
|
158
|
+
#### By Serial Number
|
|
159
|
+
|
|
160
|
+
```
|
|
161
|
+
GET /v1.4/assignment/application/{serial_number}
|
|
162
|
+
```
|
|
163
|
+
|
|
164
|
+
#### By Assignee Name
|
|
165
|
+
|
|
166
|
+
```
|
|
167
|
+
POST /v1.4/assignment/search
|
|
168
|
+
```
|
|
169
|
+
|
|
170
|
+
**Request body:**
|
|
171
|
+
```json
|
|
172
|
+
{
|
|
173
|
+
"criteria": {
|
|
174
|
+
"assigneeName": "Company Name"
|
|
175
|
+
}
|
|
176
|
+
}
|
|
177
|
+
```
|
|
178
|
+
|
|
179
|
+
### Response Format
|
|
180
|
+
|
|
181
|
+
Returns XML containing assignment records:
|
|
182
|
+
|
|
183
|
+
```xml
|
|
184
|
+
<assignments>
|
|
185
|
+
<assignment>
|
|
186
|
+
<reelFrame>12345/0678</reelFrame>
|
|
187
|
+
<conveyanceText>ASSIGNMENT OF ASSIGNORS INTEREST</conveyanceText>
|
|
188
|
+
<recordedDate>2020-01-15</recordedDate>
|
|
189
|
+
<executionDate>2020-01-10</executionDate>
|
|
190
|
+
<assignors>
|
|
191
|
+
<assignor>
|
|
192
|
+
<name>Original Owner LLC</name>
|
|
193
|
+
</assignor>
|
|
194
|
+
</assignors>
|
|
195
|
+
<assignees>
|
|
196
|
+
<assignee>
|
|
197
|
+
<name>New Owner Corporation</name>
|
|
198
|
+
</assignee>
|
|
199
|
+
</assignees>
|
|
200
|
+
</assignment>
|
|
201
|
+
</assignments>
|
|
202
|
+
```
|
|
203
|
+
|
|
204
|
+
### Key Fields
|
|
205
|
+
|
|
206
|
+
- `reelFrame` - USPTO reel and frame number
|
|
207
|
+
- `conveyanceText` - Type of transaction
|
|
208
|
+
- `recordedDate` - Date recorded at USPTO
|
|
209
|
+
- `executionDate` - Date document was executed
|
|
210
|
+
- `assignors` - Original owners
|
|
211
|
+
- `assignees` - New owners
|
|
212
|
+
- `propertyNumbers` - Affected serial/registration numbers
|
|
213
|
+
|
|
214
|
+
### Common Conveyance Types
|
|
215
|
+
|
|
216
|
+
- **ASSIGNMENT OF ASSIGNORS INTEREST** - Ownership transfer
|
|
217
|
+
- **SECURITY AGREEMENT** - Collateral/security interest
|
|
218
|
+
- **MERGER** - Corporate merger
|
|
219
|
+
- **CHANGE OF NAME** - Name change
|
|
220
|
+
- **ASSIGNMENT OF PARTIAL INTEREST** - Partial ownership transfer
|
|
221
|
+
|
|
222
|
+
### Python Example
|
|
223
|
+
|
|
224
|
+
```python
|
|
225
|
+
import requests
|
|
226
|
+
import xml.etree.ElementTree as ET
|
|
227
|
+
|
|
228
|
+
def search_trademark_assignments(registration_number, api_key):
|
|
229
|
+
"""Search assignments for a trademark registration."""
|
|
230
|
+
url = f"https://assignment-api.uspto.gov/trademark/v1.4/assignment/application/{registration_number}"
|
|
231
|
+
headers = {"X-Api-Key": api_key}
|
|
232
|
+
|
|
233
|
+
response = requests.get(url, headers=headers)
|
|
234
|
+
if response.status_code == 200:
|
|
235
|
+
return response.text # Returns XML
|
|
236
|
+
else:
|
|
237
|
+
raise Exception(f"API error: {response.status_code}")
|
|
238
|
+
|
|
239
|
+
# Usage
|
|
240
|
+
xml_data = search_trademark_assignments("5678901", "YOUR_API_KEY")
|
|
241
|
+
root = ET.fromstring(xml_data)
|
|
242
|
+
|
|
243
|
+
for assignment in root.findall('.//assignment'):
|
|
244
|
+
reel_frame = assignment.find('reelFrame').text
|
|
245
|
+
recorded_date = assignment.find('recordedDate').text
|
|
246
|
+
conveyance = assignment.find('conveyanceText').text
|
|
247
|
+
|
|
248
|
+
assignor = assignment.find('.//assignor/name').text
|
|
249
|
+
assignee = assignment.find('.//assignee/name').text
|
|
250
|
+
|
|
251
|
+
print(f"{recorded_date}: {assignor} -> {assignee}")
|
|
252
|
+
print(f" Type: {conveyance}")
|
|
253
|
+
print(f" Reel/Frame: {reel_frame}\n")
|
|
254
|
+
```
|
|
255
|
+
|
|
256
|
+
## Use Cases
|
|
257
|
+
|
|
258
|
+
### 1. Monitor Trademark Status
|
|
259
|
+
|
|
260
|
+
Check status of pending applications or registrations:
|
|
261
|
+
|
|
262
|
+
```python
|
|
263
|
+
def check_trademark_health(serial_number, api_key):
|
|
264
|
+
"""Check if trademark needs attention."""
|
|
265
|
+
data = get_trademark_status(serial_number, api_key)
|
|
266
|
+
tm = data['TradeMarkAppln']
|
|
267
|
+
|
|
268
|
+
status = tm['MarkCurrentStatusExternalDescriptionText']
|
|
269
|
+
alerts = []
|
|
270
|
+
|
|
271
|
+
if 'ABANDON' in status:
|
|
272
|
+
alerts.append("⚠️ ABANDONED")
|
|
273
|
+
elif 'PUBLISHED' in status:
|
|
274
|
+
alerts.append("📢 In opposition period")
|
|
275
|
+
elif 'SUSPENDED' in status:
|
|
276
|
+
alerts.append("⏸️ Examination suspended")
|
|
277
|
+
elif 'REGISTERED' in status:
|
|
278
|
+
alerts.append("✅ Active")
|
|
279
|
+
|
|
280
|
+
return alerts
|
|
281
|
+
```
|
|
282
|
+
|
|
283
|
+
### 2. Track Ownership Changes
|
|
284
|
+
|
|
285
|
+
Monitor assignment records for ownership changes:
|
|
286
|
+
|
|
287
|
+
```python
|
|
288
|
+
def get_current_owner(registration_number, api_key):
|
|
289
|
+
"""Find current trademark owner from assignment records."""
|
|
290
|
+
xml_data = search_trademark_assignments(registration_number, api_key)
|
|
291
|
+
root = ET.fromstring(xml_data)
|
|
292
|
+
|
|
293
|
+
assignments = []
|
|
294
|
+
for assignment in root.findall('.//assignment'):
|
|
295
|
+
date = assignment.find('recordedDate').text
|
|
296
|
+
assignee = assignment.find('.//assignee/name').text
|
|
297
|
+
assignments.append((date, assignee))
|
|
298
|
+
|
|
299
|
+
# Most recent assignment
|
|
300
|
+
if assignments:
|
|
301
|
+
assignments.sort(reverse=True)
|
|
302
|
+
return assignments[0][1]
|
|
303
|
+
return None
|
|
304
|
+
```
|
|
305
|
+
|
|
306
|
+
### 3. Portfolio Management
|
|
307
|
+
|
|
308
|
+
Analyze trademark portfolio:
|
|
309
|
+
|
|
310
|
+
```python
|
|
311
|
+
def analyze_portfolio(serial_numbers, api_key):
|
|
312
|
+
"""Analyze status of multiple trademarks."""
|
|
313
|
+
results = {
|
|
314
|
+
'active': 0,
|
|
315
|
+
'pending': 0,
|
|
316
|
+
'abandoned': 0,
|
|
317
|
+
'expired': 0
|
|
318
|
+
}
|
|
319
|
+
|
|
320
|
+
for sn in serial_numbers:
|
|
321
|
+
data = get_trademark_status(sn, api_key)
|
|
322
|
+
status = data['TradeMarkAppln']['MarkCurrentStatusExternalDescriptionText']
|
|
323
|
+
|
|
324
|
+
if 'REGISTERED' in status:
|
|
325
|
+
results['active'] += 1
|
|
326
|
+
elif 'PENDING' in status or 'PUBLISHED' in status:
|
|
327
|
+
results['pending'] += 1
|
|
328
|
+
elif 'ABANDON' in status:
|
|
329
|
+
results['abandoned'] += 1
|
|
330
|
+
elif 'EXPIRED' in status or 'CANCELLED' in status:
|
|
331
|
+
results['expired'] += 1
|
|
332
|
+
|
|
333
|
+
return results
|
|
334
|
+
```
|
|
335
|
+
|
|
336
|
+
## Rate Limits and Best Practices
|
|
337
|
+
|
|
338
|
+
1. **Respect rate limits** - Implement retry logic with exponential backoff
|
|
339
|
+
2. **Cache responses** - Trademark data changes infrequently
|
|
340
|
+
3. **Batch processing** - Spread requests over time for large portfolios
|
|
341
|
+
4. **Error handling** - Handle missing data gracefully (not all marks have all fields)
|
|
342
|
+
5. **Data validation** - Verify serial/registration numbers before API calls
|
|
343
|
+
|
|
344
|
+
## Integration with Other Data
|
|
345
|
+
|
|
346
|
+
Combine trademark data with other sources:
|
|
347
|
+
|
|
348
|
+
- **TSDR + Assignment** - Current status + ownership history
|
|
349
|
+
- **Multiple marks** - Analyze related marks in a family
|
|
350
|
+
- **Patent data** - Cross-reference IP portfolio
|
|
351
|
+
|
|
352
|
+
## Resources
|
|
353
|
+
|
|
354
|
+
- **TSDR API**: https://developer.uspto.gov/api-catalog/tsdr-data-api
|
|
355
|
+
- **Assignment API**: https://developer.uspto.gov/api-catalog/trademark-assignment-search-data-api
|
|
356
|
+
- **API Key Registration**: https://account.uspto.gov/api-manager/
|
|
357
|
+
- **Trademark Search**: https://tmsearch.uspto.gov/
|
|
358
|
+
- **Swagger Documentation**: https://developer.uspto.gov/swagger/tsdr-api-v1
|