@synsci/cli-darwin-x64-baseline 1.1.76 → 1.1.78

package/bin/skills/sympy/references/code-generation-printing.md

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+# SymPy Code Generation and Printing
+
+This document covers SymPy's capabilities for generating executable code in various languages, converting expressions to different output formats, and customizing printing behavior.
+
+## Code Generation
+
+### Converting to NumPy Functions
+
+```python
+from sympy import symbols, sin, cos, lambdify
+import numpy as np
+
+x, y = symbols('x y')
+expr = sin(x) + cos(y)
+
+# Create NumPy function
+f = lambdify((x, y), expr, 'numpy')
+
+# Use with NumPy arrays
+x_vals = np.linspace(0, 2*np.pi, 100)
+y_vals = np.linspace(0, 2*np.pi, 100)
+result = f(x_vals, y_vals)
+```
+
+### Lambdify Options
+
+```python
+from sympy import lambdify, exp, sqrt
+
+# Different backends
+f_numpy = lambdify(x, expr, 'numpy')      # NumPy
+f_scipy = lambdify(x, expr, 'scipy')      # SciPy
+f_mpmath = lambdify(x, expr, 'mpmath')    # mpmath (arbitrary precision)
+f_math = lambdify(x, expr, 'math')        # Python math module
+
+# Custom function mapping
+custom_funcs = {'sin': lambda x: x}  # Replace sin with identity
+f = lambdify(x, sin(x), modules=[custom_funcs, 'numpy'])
+
+# Multiple expressions
+exprs = [x**2, x**3, x**4]
+f = lambdify(x, exprs, 'numpy')
+# Returns tuple of results
+```
+
+### Generating C/C++ Code
+
+```python
+from sympy.utilities.codegen import codegen
+from sympy import symbols
+
+x, y = symbols('x y')
+expr = x**2 + y**2
+
+# Generate C code
+[(c_name, c_code), (h_name, h_header)] = codegen(
+    ('distance_squared', expr),
+    'C',
+    header=False,
+    empty=False
+)
+
+print(c_code)
+# Outputs valid C function
+```
+
+### Generating Fortran Code
+
+```python
+from sympy.utilities.codegen import codegen
+
+[(f_name, f_code), (h_name, h_interface)] = codegen(
+    ('my_function', expr),
+    'F95',  # Fortran 95
+    header=False
+)
+
+print(f_code)
+```
+
+### Advanced Code Generation
+
+```python
+from sympy.utilities.codegen import CCodeGen, make_routine
+from sympy import MatrixSymbol, Matrix
+
+# Matrix operations
+A = MatrixSymbol('A', 3, 3)
+expr = A + A.T
+
+# Create routine
+routine = make_routine('matrix_sum', expr)
+
+# Generate code
+gen = CCodeGen()
+code = gen.write([routine], prefix='my_module')
+```
+
+### Code Printers
+
+```python
+from sympy.printing.c import C99CodePrinter, C89CodePrinter
+from sympy.printing.fortran import FCodePrinter
+from sympy.printing.cxx import CXX11CodePrinter
+
+# C code
+c_printer = C99CodePrinter()
+c_code = c_printer.doprint(expr)
+
+# Fortran code
+f_printer = FCodePrinter()
+f_code = f_printer.doprint(expr)
+
+# C++ code
+cxx_printer = CXX11CodePrinter()
+cxx_code = cxx_printer.doprint(expr)
+```
+
+## Printing and Output Formats
+
+### Pretty Printing
+
+```python
+from sympy import init_printing, pprint, pretty, symbols
+from sympy import Integral, sqrt, pi
+
+# Initialize pretty printing (for Jupyter notebooks and terminal)
+init_printing()
+
+x = symbols('x')
+expr = Integral(sqrt(1/x), (x, 0, pi))
+
+# Pretty print to terminal
+pprint(expr)
+#   π
+#   ⌠
+#   ⎮   1
+#   ⎮  ───  dx
+#   ⎮  √x
+#   ⌡
+#   0
+
+# Get pretty string
+s = pretty(expr)
+print(s)
+```
+
+### LaTeX Output
+
+```python
+from sympy import latex, symbols, Integral, sin, sqrt
+
+x, y = symbols('x y')
+expr = Integral(sin(x)**2, (x, 0, pi))
+
+# Convert to LaTeX
+latex_str = latex(expr)
+print(latex_str)
+# \int\limits_{0}^{\pi} \sin^{2}{\left(x \right)}\, dx
+
+# Custom LaTeX formatting
+latex_str = latex(expr, mode='equation')  # Wrapped in equation environment
+latex_str = latex(expr, mode='inline')    # Inline math
+
+# For matrices
+from sympy import Matrix
+M = Matrix([[1, 2], [3, 4]])
+latex(M)  # \left[\begin{matrix}1 & 2\\3 & 4\end{matrix}\right]
+```
+
+### MathML Output
+
+```python
+from sympy.printing.mathml import mathml, print_mathml
+from sympy import sin, pi
+
+expr = sin(pi/4)
+
+# Content MathML
+mathml_str = mathml(expr)
+
+# Presentation MathML
+mathml_str = mathml(expr, printer='presentation')
+
+# Print to console
+print_mathml(expr)
+```
+
+### String Representations
+
+```python
+from sympy import symbols, sin, pi, srepr, sstr
+
+x = symbols('x')
+expr = sin(x)**2
+
+# Standard string (what you see in Python)
+str(expr)  # 'sin(x)**2'
+
+# String representation (prettier)
+sstr(expr)  # 'sin(x)**2'
+
+# Reproducible representation
+srepr(expr)  # "Pow(sin(Symbol('x')), Integer(2))"
+# This can be eval()'ed to recreate the expression
+```
+
+### Custom Printing
+
+```python
+from sympy.printing.str import StrPrinter
+
+class MyPrinter(StrPrinter):
+    def _print_Symbol(self, expr):
+        return f"<{expr.name}>"
+
+    def _print_Add(self, expr):
+        return " PLUS ".join(self._print(arg) for arg in expr.args)
+
+printer = MyPrinter()
+x, y = symbols('x y')
+print(printer.doprint(x + y))  # "<x> PLUS <y>"
+```
+
+## Python Code Generation
+
+### autowrap - Compile and Import
+
+```python
+from sympy.utilities.autowrap import autowrap
+from sympy import symbols
+
+x, y = symbols('x y')
+expr = x**2 + y**2
+
+# Automatically compile C code and create Python wrapper
+f = autowrap(expr, backend='cython')
+# or backend='f2py' for Fortran
+
+# Use like a regular function
+result = f(3, 4)  # 25
+```
+
+### ufuncify - Create NumPy ufuncs
+
+```python
+from sympy.utilities.autowrap import ufuncify
+import numpy as np
+
+x, y = symbols('x y')
+expr = x**2 + y**2
+
+# Create universal function
+f = ufuncify((x, y), expr)
+
+# Works with NumPy broadcasting
+x_arr = np.array([1, 2, 3])
+y_arr = np.array([4, 5, 6])
+result = f(x_arr, y_arr)  # [17, 29, 45]
+```
+
+## Expression Tree Manipulation
+
+### Walking Expression Trees
+
+```python
+from sympy import symbols, sin, cos, preorder_traversal, postorder_traversal
+
+x, y = symbols('x y')
+expr = sin(x) + cos(y)
+
+# Preorder traversal (parent before children)
+for arg in preorder_traversal(expr):
+    print(arg)
+
+# Postorder traversal (children before parent)
+for arg in postorder_traversal(expr):
+    print(arg)
+
+# Get all subexpressions
+subexprs = list(preorder_traversal(expr))
+```
+
+### Expression Substitution in Trees
+
+```python
+from sympy import Wild, symbols, sin, cos
+
+x, y = symbols('x y')
+a = Wild('a')
+
+expr = sin(x) + cos(y)
+
+# Pattern matching and replacement
+new_expr = expr.replace(sin(a), a**2)  # sin(x) -> x**2
+```
+
+## Jupyter Notebook Integration
+
+### Display Math
+
+```python
+from sympy import init_printing, display
+from IPython.display import display as ipy_display
+
+# Initialize printing for Jupyter
+init_printing(use_latex='mathjax')  # or 'png', 'svg'
+
+# Display expressions beautifully
+expr = Integral(sin(x)**2, x)
+display(expr)  # Renders as LaTeX in notebook
+
+# Multiple outputs
+ipy_display(expr1, expr2, expr3)
+```
+
+### Interactive Widgets
+
+```python
+from sympy import symbols, sin
+from IPython.display import display
+from ipywidgets import interact, FloatSlider
+import matplotlib.pyplot as plt
+import numpy as np
+
+x = symbols('x')
+expr = sin(x)
+
+@interact(a=FloatSlider(min=0, max=10, step=0.1, value=1))
+def plot_expr(a):
+    f = lambdify(x, a * expr, 'numpy')
+    x_vals = np.linspace(-np.pi, np.pi, 100)
+    plt.plot(x_vals, f(x_vals))
+    plt.show()
+```
+
+## Converting Between Representations
+
+### String to SymPy
+
+```python
+from sympy.parsing.sympy_parser import parse_expr
+from sympy import symbols
+
+x, y = symbols('x y')
+
+# Parse string to expression
+expr = parse_expr('x**2 + 2*x + 1')
+expr = parse_expr('sin(x) + cos(y)')
+
+# With transformations
+from sympy.parsing.sympy_parser import (
+    standard_transformations,
+    implicit_multiplication_application
+)
+
+transformations = standard_transformations + (implicit_multiplication_application,)
+expr = parse_expr('2x', transformations=transformations)  # Treats '2x' as 2*x
+```
+
+### LaTeX to SymPy
+
+```python
+from sympy.parsing.latex import parse_latex
+
+# Parse LaTeX
+expr = parse_latex(r'\frac{x^2}{y}')
+# Returns: x**2/y
+
+expr = parse_latex(r'\int_0^\pi \sin(x) dx')
+```
+
+### Mathematica to SymPy
+
+```python
+from sympy.parsing.mathematica import parse_mathematica
+
+# Parse Mathematica code
+expr = parse_mathematica('Sin[x]^2 + Cos[y]^2')
+# Returns SymPy expression
+```
+
+## Exporting Results
+
+### Export to File
+
+```python
+from sympy import symbols, sin
+import json
+
+x = symbols('x')
+expr = sin(x)**2
+
+# Export as LaTeX to file
+with open('output.tex', 'w') as f:
+    f.write(latex(expr))
+
+# Export as string
+with open('output.txt', 'w') as f:
+    f.write(str(expr))
+
+# Export as Python code
+with open('output.py', 'w') as f:
+    f.write(f"from numpy import sin\n")
+    f.write(f"def f(x):\n")
+    f.write(f"    return {lambdify(x, expr, 'numpy')}\n")
+```
+
+### Pickle SymPy Objects
+
+```python
+import pickle
+from sympy import symbols, sin
+
+x = symbols('x')
+expr = sin(x)**2 + x
+
+# Save
+with open('expr.pkl', 'wb') as f:
+    pickle.dump(expr, f)
+
+# Load
+with open('expr.pkl', 'rb') as f:
+    loaded_expr = pickle.load(f)
+```
+
+## Numerical Evaluation and Precision
+
+### High-Precision Evaluation
+
+```python
+from sympy import symbols, pi, sqrt, E, exp, sin
+from mpmath import mp
+
+x = symbols('x')
+
+# Standard precision
+pi.evalf()  # 3.14159265358979
+
+# High precision (1000 digits)
+pi.evalf(1000)
+
+# Set global precision with mpmath
+mp.dps = 50  # 50 decimal places
+expr = exp(pi * sqrt(163))
+float(expr.evalf())
+
+# For expressions
+result = (sqrt(2) + sqrt(3)).evalf(100)
+```
+
+### Numerical Substitution
+
+```python
+from sympy import symbols, sin, cos
+
+x, y = symbols('x y')
+expr = sin(x) + cos(y)
+
+# Numerical evaluation
+result = expr.evalf(subs={x: 1.5, y: 2.3})
+
+# With units
+from sympy.physics.units import meter, second
+distance = 100 * meter
+time = 10 * second
+speed = distance / time
+speed.evalf()
+```
+
+## Common Patterns
+
+### Pattern 1: Generate and Execute Code
+
+```python
+from sympy import symbols, lambdify
+import numpy as np
+
+# 1. Define symbolic expression
+x, y = symbols('x y')
+expr = x**2 + y**2
+
+# 2. Generate function
+f = lambdify((x, y), expr, 'numpy')
+
+# 3. Execute with numerical data
+data_x = np.random.rand(1000)
+data_y = np.random.rand(1000)
+results = f(data_x, data_y)
+```
+
+### Pattern 2: Create LaTeX Documentation
+
+```python
+from sympy import symbols, Integral, latex
+from sympy.abc import x
+
+# Define mathematical content
+expr = Integral(x**2, (x, 0, 1))
+result = expr.doit()
+
+# Generate LaTeX document
+latex_doc = f"""
+\\documentclass{{article}}
+\\usepackage{{amsmath}}
+\\begin{{document}}
+
+We compute the integral:
+\\begin{{equation}}
+{latex(expr)} = {latex(result)}
+\\end{{equation}}
+
+\\end{{document}}
+"""
+
+with open('document.tex', 'w') as f:
+    f.write(latex_doc)
+```
+
+### Pattern 3: Interactive Computation
+
+```python
+from sympy import symbols, simplify, expand
+from sympy.parsing.sympy_parser import parse_expr
+
+x, y = symbols('x y')
+
+# Interactive input
+user_input = input("Enter expression: ")
+expr = parse_expr(user_input)
+
+# Process
+simplified = simplify(expr)
+expanded = expand(expr)
+
+# Display
+print(f"Simplified: {simplified}")
+print(f"Expanded: {expanded}")
+print(f"LaTeX: {latex(expr)}")
+```
+
+### Pattern 4: Batch Code Generation
+
+```python
+from sympy import symbols, lambdify
+from sympy.utilities.codegen import codegen
+
+# Multiple functions
+x = symbols('x')
+functions = {
+    'f1': x**2,
+    'f2': x**3,
+    'f3': x**4
+}
+
+# Generate C code for all
+for name, expr in functions.items():
+    [(c_name, c_code), _] = codegen((name, expr), 'C')
+    with open(f'{name}.c', 'w') as f:
+        f.write(c_code)
+```
+
+### Pattern 5: Performance Optimization
+
+```python
+from sympy import symbols, sin, cos, cse
+import numpy as np
+
+x, y = symbols('x y')
+
+# Complex expression with repeated subexpressions
+expr = sin(x + y)**2 + cos(x + y)**2 + sin(x + y)
+
+# Common subexpression elimination
+replacements, reduced = cse(expr)
+# replacements: [(x0, sin(x + y)), (x1, cos(x + y))]
+# reduced: [x0**2 + x1**2 + x0]
+
+# Generate optimized code
+for var, subexpr in replacements:
+    print(f"{var} = {subexpr}")
+print(f"result = {reduced[0]}")
+```
+
+## Important Notes
+
+1. **NumPy compatibility:** When using `lambdify` with NumPy, ensure your expression uses functions available in NumPy.
+
+2. **Performance:** For numerical work, always use `lambdify` or code generation rather than `subs()` + `evalf()` in loops.
+
+3. **Precision:** Use `mpmath` for arbitrary precision arithmetic when needed.
+
+4. **Code generation caveats:** Generated code may not handle all edge cases. Test thoroughly.
+
+5. **Compilation:** `autowrap` and `ufuncify` require a C/Fortran compiler and may need configuration on your system.
+
+6. **Parsing:** When parsing user input, validate and sanitize to avoid code injection vulnerabilities.
+
+7. **Jupyter:** For best results in Jupyter notebooks, call `init_printing()` at the start of your session.