@researai/deepscientist 1.5.16 → 1.6.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (896) hide show
  1. package/AGENTS.md +309 -130
  2. package/AISB/catalog/aisb.b1.agentic_coding.yaml +244 -0
  3. package/AISB/catalog/aisb.b10.climate_earth.yaml +235 -0
  4. package/AISB/catalog/aisb.b11.model_efficiency.yaml +231 -0
  5. package/AISB/catalog/aisb.b12.embodied_ai.yaml +238 -0
  6. package/AISB/catalog/aisb.b2.agent_systems.yaml +229 -0
  7. package/AISB/catalog/aisb.b3.self_evolving_rl.yaml +237 -0
  8. package/AISB/catalog/aisb.b4.lm_reasoning.yaml +240 -0
  9. package/AISB/catalog/aisb.b5.math_proof.yaml +235 -0
  10. package/AISB/catalog/aisb.b6.research_process.yaml +243 -0
  11. package/AISB/catalog/aisb.b7.multimodal_fusion.yaml +232 -0
  12. package/AISB/catalog/aisb.b8.lifesci_drug.yaml +275 -0
  13. package/AISB/catalog/aisb.b9.material_science.yaml +237 -0
  14. package/AISB/catalog/aisb.t3.001_savvy.yaml +159 -0
  15. package/AISB/catalog/aisb.t3.001_savvy.zh.yaml +121 -0
  16. package/AISB/catalog/aisb.t3.002_pinet.yaml +189 -0
  17. package/AISB/catalog/aisb.t3.002_pinet.zh.yaml +130 -0
  18. package/AISB/catalog/aisb.t3.004_decentralattn.yaml +184 -0
  19. package/AISB/catalog/aisb.t3.004_decentralattn.zh.yaml +153 -0
  20. package/AISB/catalog/aisb.t3.005_tsae.yaml +193 -0
  21. package/AISB/catalog/aisb.t3.005_tsae.zh.yaml +139 -0
  22. package/AISB/catalog/aisb.t3.006_physense.yaml +194 -0
  23. package/AISB/catalog/aisb.t3.006_physense.zh.yaml +118 -0
  24. package/AISB/catalog/aisb.t3.007_reasoningiqa.yaml +169 -0
  25. package/AISB/catalog/aisb.t3.007_reasoningiqa.zh.yaml +133 -0
  26. package/AISB/catalog/aisb.t3.008_meanflows.yaml +188 -0
  27. package/AISB/catalog/aisb.t3.008_meanflows.zh.yaml +140 -0
  28. package/AISB/catalog/aisb.t3.009_scoremissing.yaml +179 -0
  29. package/AISB/catalog/aisb.t3.009_scoremissing.zh.yaml +119 -0
  30. package/AISB/catalog/aisb.t3.010_suitabilityfilter.yaml +221 -0
  31. package/AISB/catalog/aisb.t3.010_suitabilityfilter.zh.yaml +141 -0
  32. package/AISB/catalog/aisb.t3.011_osd.yaml +206 -0
  33. package/AISB/catalog/aisb.t3.011_osd.zh.yaml +163 -0
  34. package/AISB/catalog/aisb.t3.012_efficientqat.yaml +206 -0
  35. package/AISB/catalog/aisb.t3.012_efficientqat.zh.yaml +159 -0
  36. package/AISB/catalog/aisb.t3.013_appl.yaml +152 -0
  37. package/AISB/catalog/aisb.t3.013_appl.zh.yaml +126 -0
  38. package/AISB/catalog/aisb.t3.014_piguard.yaml +207 -0
  39. package/AISB/catalog/aisb.t3.014_piguard.zh.yaml +164 -0
  40. package/AISB/catalog/aisb.t3.015_frspec.yaml +209 -0
  41. package/AISB/catalog/aisb.t3.015_frspec.zh.yaml +163 -0
  42. package/AISB/catalog/aisb.t3.016_mathfusion.yaml +166 -0
  43. package/AISB/catalog/aisb.t3.016_mathfusion.zh.yaml +145 -0
  44. package/AISB/catalog/aisb.t3.017_multimodalglp.yaml +171 -0
  45. package/AISB/catalog/aisb.t3.017_multimodalglp.zh.yaml +122 -0
  46. package/AISB/catalog/aisb.t3.018_cotsynth.yaml +206 -0
  47. package/AISB/catalog/aisb.t3.018_cotsynth.zh.yaml +162 -0
  48. package/AISB/catalog/aisb.t3.019_dyscaleut.yaml +211 -0
  49. package/AISB/catalog/aisb.t3.019_dyscaleut.zh.yaml +148 -0
  50. package/AISB/catalog/aisb.t3.020_aristotle.yaml +173 -0
  51. package/AISB/catalog/aisb.t3.020_aristotle.zh.yaml +119 -0
  52. package/AISB/catalog/aisb.t3.021_tokenrecycling.yaml +160 -0
  53. package/AISB/catalog/aisb.t3.021_tokenrecycling.zh.yaml +129 -0
  54. package/AISB/catalog/aisb.t3.022_chainofreasoning.yaml +204 -0
  55. package/AISB/catalog/aisb.t3.022_chainofreasoning.zh.yaml +161 -0
  56. package/AISB/catalog/aisb.t3.023_guidedembed.yaml +211 -0
  57. package/AISB/catalog/aisb.t3.023_guidedembed.zh.yaml +189 -0
  58. package/AISB/catalog/aisb.t3.024_outputcentric.yaml +148 -0
  59. package/AISB/catalog/aisb.t3.024_outputcentric.zh.yaml +131 -0
  60. package/AISB/catalog/aisb.t3.025_deeper.yaml +143 -0
  61. package/AISB/catalog/aisb.t3.025_deeper.zh.yaml +116 -0
  62. package/AISB/catalog/aisb.t3.026_gartkg.yaml +195 -0
  63. package/AISB/catalog/aisb.t3.026_gartkg.zh.yaml +127 -0
  64. package/AISB/catalog/aisb.t3.027_citeeval.yaml +182 -0
  65. package/AISB/catalog/aisb.t3.027_citeeval.zh.yaml +135 -0
  66. package/AISB/catalog/aisb.t3.028_sbam.yaml +206 -0
  67. package/AISB/catalog/aisb.t3.028_sbam.zh.yaml +166 -0
  68. package/AISB/catalog/aisb.t3.029_cdqgeoembed.yaml +224 -0
  69. package/AISB/catalog/aisb.t3.029_cdqgeoembed.zh.yaml +142 -0
  70. package/AISB/catalog/aisb.t3.030_processrm.yaml +211 -0
  71. package/AISB/catalog/aisb.t3.030_processrm.zh.yaml +166 -0
  72. package/AISB/catalog/aisb.t3.031_circuitstability.yaml +172 -0
  73. package/AISB/catalog/aisb.t3.031_circuitstability.zh.yaml +134 -0
  74. package/AISB/catalog/aisb.t3.032_ptsolver.yaml +169 -0
  75. package/AISB/catalog/aisb.t3.032_ptsolver.zh.yaml +135 -0
  76. package/AISB/catalog/aisb.t3.033_gcse.yaml +144 -0
  77. package/AISB/catalog/aisb.t3.033_gcse.zh.yaml +126 -0
  78. package/AISB/catalog/aisb.t3.034_ensemblewm.yaml +183 -0
  79. package/AISB/catalog/aisb.t3.034_ensemblewm.zh.yaml +146 -0
  80. package/AISB/catalog/aisb.t3.035_moralvalueswa.yaml +207 -0
  81. package/AISB/catalog/aisb.t3.035_moralvalueswa.zh.yaml +165 -0
  82. package/AISB/catalog/aisb.t3.036_weakstrongpref.yaml +210 -0
  83. package/AISB/catalog/aisb.t3.036_weakstrongpref.zh.yaml +194 -0
  84. package/AISB/catalog/aisb.t3.037_dementiamask.yaml +172 -0
  85. package/AISB/catalog/aisb.t3.037_dementiamask.zh.yaml +132 -0
  86. package/AISB/catalog/aisb.t3.038_tinysam.yaml +284 -0
  87. package/AISB/catalog/aisb.t3.038_tinysam.zh.yaml +240 -0
  88. package/AISB/catalog/aisb.t3.039_calf.yaml +224 -0
  89. package/AISB/catalog/aisb.t3.039_calf.zh.yaml +194 -0
  90. package/AISB/catalog/aisb.t3.040_graniteguardian.yaml +199 -0
  91. package/AISB/catalog/aisb.t3.040_graniteguardian.zh.yaml +174 -0
  92. package/AISB/catalog/aisb.t3.041_amdm.yaml +149 -0
  93. package/AISB/catalog/aisb.t3.041_amdm.zh.yaml +137 -0
  94. package/AISB/catalog/aisb.t3.042_xpatch.yaml +216 -0
  95. package/AISB/catalog/aisb.t3.042_xpatch.zh.yaml +182 -0
  96. package/AISB/catalog/aisb.t3.043_vhm.yaml +268 -0
  97. package/AISB/catalog/aisb.t3.043_vhm.zh.yaml +193 -0
  98. package/AISB/catalog/aisb.t3.044_rgvi.yaml +224 -0
  99. package/AISB/catalog/aisb.t3.044_rgvi.zh.yaml +176 -0
  100. package/AISB/catalog/aisb.t3.045_pslstm.yaml +203 -0
  101. package/AISB/catalog/aisb.t3.045_pslstm.zh.yaml +179 -0
  102. package/AISB/catalog/aisb.t3.046_nonstatts.yaml +208 -0
  103. package/AISB/catalog/aisb.t3.046_nonstatts.zh.yaml +194 -0
  104. package/AISB/catalog/aisb.t3.047_timepfn.yaml +156 -0
  105. package/AISB/catalog/aisb.t3.047_timepfn.zh.yaml +124 -0
  106. package/AISB/catalog/aisb.t3.048_proxyspex.yaml +148 -0
  107. package/AISB/catalog/aisb.t3.048_proxyspex.zh.yaml +125 -0
  108. package/AISB/catalog/aisb.t3.049_hogwildinference.yaml +183 -0
  109. package/AISB/catalog/aisb.t3.049_hogwildinference.zh.yaml +138 -0
  110. package/AISB/catalog/aisb.t3.050_causalpfn.yaml +214 -0
  111. package/AISB/catalog/aisb.t3.050_causalpfn.zh.yaml +190 -0
  112. package/AISB/catalog/aisb.t3.051_flashtp.yaml +169 -0
  113. package/AISB/catalog/aisb.t3.051_flashtp.zh.yaml +124 -0
  114. package/AISB/catalog/aisb.t3.052_nsdiff.yaml +155 -0
  115. package/AISB/catalog/aisb.t3.052_nsdiff.zh.yaml +138 -0
  116. package/AISB/catalog/aisb.t3.053_k2vae.yaml +158 -0
  117. package/AISB/catalog/aisb.t3.053_k2vae.zh.yaml +132 -0
  118. package/AISB/catalog/aisb.t3.054_timebase.yaml +178 -0
  119. package/AISB/catalog/aisb.t3.054_timebase.zh.yaml +158 -0
  120. package/AISB/catalog/aisb.t3.055_csbrain.yaml +238 -0
  121. package/AISB/catalog/aisb.t3.055_csbrain.zh.yaml +184 -0
  122. package/AISB/catalog/aisb.t3.056_infosam.yaml +224 -0
  123. package/AISB/catalog/aisb.t3.056_infosam.zh.yaml +189 -0
  124. package/AISB/catalog/aisb.t3.057_mdreid.yaml +129 -0
  125. package/AISB/catalog/aisb.t3.057_mdreid.zh.yaml +117 -0
  126. package/AISB/catalog/aisb.t3.058_mindglitch.yaml +171 -0
  127. package/AISB/catalog/aisb.t3.058_mindglitch.zh.yaml +145 -0
  128. package/AISB/catalog/aisb.t3.059_selfsupervised.yaml +154 -0
  129. package/AISB/catalog/aisb.t3.059_selfsupervised.zh.yaml +125 -0
  130. package/AISB/catalog/aisb.t3.060_iaggad.yaml +121 -0
  131. package/AISB/catalog/aisb.t3.060_iaggad.zh.yaml +100 -0
  132. package/AISB/catalog/aisb.t3.061_hsgkn.yaml +136 -0
  133. package/AISB/catalog/aisb.t3.061_hsgkn.zh.yaml +113 -0
  134. package/AISB/catalog/aisb.t3.062_visionts.yaml +237 -0
  135. package/AISB/catalog/aisb.t3.062_visionts.zh.yaml +216 -0
  136. package/AISB/catalog/aisb.t3.063_tsrag.yaml +162 -0
  137. package/AISB/catalog/aisb.t3.063_tsrag.zh.yaml +138 -0
  138. package/AISB/catalog/aisb.t3.064_pir.yaml +221 -0
  139. package/AISB/catalog/aisb.t3.064_pir.zh.yaml +197 -0
  140. package/AISB/catalog/aisb.t3.065_proteinbinding.yaml +234 -0
  141. package/AISB/catalog/aisb.t3.065_proteinbinding.zh.yaml +167 -0
  142. package/AISB/catalog/aisb.t3.066_tropicalattention.yaml +267 -0
  143. package/AISB/catalog/aisb.t3.066_tropicalattention.zh.yaml +229 -0
  144. package/AISB/catalog/aisb.t3.067_kanad.yaml +193 -0
  145. package/AISB/catalog/aisb.t3.067_kanad.zh.yaml +167 -0
  146. package/AISB/catalog/aisb.t3.068_sempo.yaml +187 -0
  147. package/AISB/catalog/aisb.t3.068_sempo.zh.yaml +148 -0
  148. package/AISB/catalog/aisb.t3.069_treehfd.yaml +129 -0
  149. package/AISB/catalog/aisb.t3.069_treehfd.zh.yaml +111 -0
  150. package/AISB/catalog/aisb.t3.070_certifiedunlearning.yaml +224 -0
  151. package/AISB/catalog/aisb.t3.070_certifiedunlearning.zh.yaml +171 -0
  152. package/AISB/catalog/aisb.t3.071_neuralmjd.yaml +142 -0
  153. package/AISB/catalog/aisb.t3.071_neuralmjd.zh.yaml +120 -0
  154. package/AISB/catalog/aisb.t3.072_fedgmt.yaml +181 -0
  155. package/AISB/catalog/aisb.t3.072_fedgmt.zh.yaml +158 -0
  156. package/AISB/catalog/aisb.t3.073_rld.yaml +161 -0
  157. package/AISB/catalog/aisb.t3.073_rld.zh.yaml +129 -0
  158. package/AISB/catalog/aisb.t3.074_lsvi.yaml +163 -0
  159. package/AISB/catalog/aisb.t3.074_lsvi.zh.yaml +129 -0
  160. package/AISB/catalog/aisb.t3.075_treeslicedentropy.yaml +201 -0
  161. package/AISB/catalog/aisb.t3.075_treeslicedentropy.zh.yaml +148 -0
  162. package/AISB/catalog/aisb.t3.076_aanet.yaml +169 -0
  163. package/AISB/catalog/aisb.t3.076_aanet.zh.yaml +129 -0
  164. package/AISB/catalog/aisb.t3.077_cmnn.yaml +199 -0
  165. package/AISB/catalog/aisb.t3.077_cmnn.zh.yaml +165 -0
  166. package/AISB/catalog/aisb.t3.078_conformalanomaly.yaml +146 -0
  167. package/AISB/catalog/aisb.t3.078_conformalanomaly.zh.yaml +117 -0
  168. package/AISB/catalog/aisb.t3.079_dpfkmeans.yaml +131 -0
  169. package/AISB/catalog/aisb.t3.079_dpfkmeans.zh.yaml +104 -0
  170. package/AISB/catalog/aisb.t3.080_latentscorereweight.yaml +169 -0
  171. package/AISB/catalog/aisb.t3.080_latentscorereweight.zh.yaml +123 -0
  172. package/AISB/catalog/aisb.t3.081_qmamba.yaml +150 -0
  173. package/AISB/catalog/aisb.t3.081_qmamba.zh.yaml +117 -0
  174. package/AISB/catalog/aisb.t3.082_onlinellmrouting.yaml +160 -0
  175. package/AISB/catalog/aisb.t3.082_onlinellmrouting.zh.yaml +133 -0
  176. package/AISB/catalog/aisb.t3.083_starformer.yaml +178 -0
  177. package/AISB/catalog/aisb.t3.083_starformer.zh.yaml +140 -0
  178. package/AISB/catalog/aisb.t3.084_ift.yaml +139 -0
  179. package/AISB/catalog/aisb.t3.084_ift.zh.yaml +111 -0
  180. package/AISB/catalog/aisb.t3.085_neuralsurv.yaml +183 -0
  181. package/AISB/catalog/aisb.t3.085_neuralsurv.zh.yaml +143 -0
  182. package/AISB/catalog/aisb.t3.086_stella.yaml +197 -0
  183. package/AISB/catalog/aisb.t3.086_stella.zh.yaml +142 -0
  184. package/AISB/catalog/aisb.t3.087_moses.yaml +167 -0
  185. package/AISB/catalog/aisb.t3.087_moses.zh.yaml +132 -0
  186. package/AISB/catalog/aisb.t3.088_channelnorm.yaml +140 -0
  187. package/AISB/catalog/aisb.t3.088_channelnorm.zh.yaml +109 -0
  188. package/AISB/catalog/aisb.t3.089_causalvelocity.yaml +730 -0
  189. package/AISB/catalog/aisb.t3.089_causalvelocity.zh.yaml +668 -0
  190. package/AISB/catalog/aisb.t3.090_rstib.yaml +144 -0
  191. package/AISB/catalog/aisb.t3.090_rstib.zh.yaml +109 -0
  192. package/AISB/catalog/aisb.t3.091_timeawarecausal.yaml +132 -0
  193. package/AISB/catalog/aisb.t3.091_timeawarecausal.zh.yaml +107 -0
  194. package/AISB/catalog/aisb.t3.092_kmeanslocalopt.yaml +138 -0
  195. package/AISB/catalog/aisb.t3.092_kmeanslocalopt.zh.yaml +110 -0
  196. package/AISB/catalog/aisb.t3.093_fedwmsam.yaml +134 -0
  197. package/AISB/catalog/aisb.t3.093_fedwmsam.zh.yaml +106 -0
  198. package/AISB/catalog/aisb.t3.094_boundre.yaml +147 -0
  199. package/AISB/catalog/aisb.t3.094_boundre.zh.yaml +114 -0
  200. package/AISB/catalog/aisb.t3.095_fastfeaturecp.yaml +153 -0
  201. package/AISB/catalog/aisb.t3.095_fastfeaturecp.zh.yaml +118 -0
  202. package/AISB/catalog/aisb.t3.096_m3svm.yaml +189 -0
  203. package/AISB/catalog/aisb.t3.096_m3svm.zh.yaml +149 -0
  204. package/AISB/catalog/aisb.t3.097_wassersteintl.yaml +212 -0
  205. package/AISB/catalog/aisb.t3.097_wassersteintl.zh.yaml +169 -0
  206. package/AISB/catalog/aisb.t3.098_xmahalanobis.yaml +171 -0
  207. package/AISB/catalog/aisb.t3.098_xmahalanobis.zh.yaml +127 -0
  208. package/AISB/catalog/aisb.t3.099_ollalanding.yaml +248 -0
  209. package/AISB/catalog/aisb.t3.099_ollalanding.zh.yaml +182 -0
  210. package/AISB/catalog/aisb.t3.100_invmissingdata.yaml +179 -0
  211. package/AISB/catalog/aisb.t3.100_invmissingdata.zh.yaml +150 -0
  212. package/AISB/catalog/aisb.t3.101_acia.yaml +164 -0
  213. package/AISB/catalog/aisb.t3.101_acia.zh.yaml +109 -0
  214. package/AISB/catalog/aisb.t3.102_stochasticff.yaml +178 -0
  215. package/AISB/catalog/aisb.t3.102_stochasticff.zh.yaml +130 -0
  216. package/AISB/catalog/aisb.t3.103_qdcp.yaml +150 -0
  217. package/AISB/catalog/aisb.t3.103_qdcp.zh.yaml +116 -0
  218. package/AISB/catalog/aisb.t3.104_balancedactiveinf.yaml +137 -0
  219. package/AISB/catalog/aisb.t3.104_balancedactiveinf.zh.yaml +104 -0
  220. package/AISB/catalog/aisb.t3.105_binaryclasseval.yaml +161 -0
  221. package/AISB/catalog/aisb.t3.105_binaryclasseval.zh.yaml +130 -0
  222. package/AISB/image/001_aisb.t3.001_savvy.jpg +0 -0
  223. package/AISB/image/002_aisb.t3.002_pinet.jpg +0 -0
  224. package/AISB/image/003_aisb.t3.003_dmsqd.jpg +0 -0
  225. package/AISB/image/004_aisb.t3.004_decentralattn.jpg +0 -0
  226. package/AISB/image/005_aisb.t3.005_tsae.jpg +0 -0
  227. package/AISB/image/006_aisb.t3.006_physense.jpg +0 -0
  228. package/AISB/image/007_aisb.t3.007_reasoningiqa.jpg +0 -0
  229. package/AISB/image/008_aisb.t3.008_meanflows.jpg +0 -0
  230. package/AISB/image/009_aisb.t3.009_scoremissing.jpg +0 -0
  231. package/AISB/image/010_aisb.t3.010_suitabilityfilter.jpg +0 -0
  232. package/AISB/image/011_aisb.t3.011_osd.jpg +0 -0
  233. package/AISB/image/012_aisb.t3.012_efficientqat.jpg +0 -0
  234. package/AISB/image/013_aisb.t3.013_appl.jpg +0 -0
  235. package/AISB/image/014_aisb.t3.014_piguard.jpg +0 -0
  236. package/AISB/image/015_aisb.t3.015_frspec.jpg +0 -0
  237. package/AISB/image/016_aisb.t3.016_mathfusion.jpg +0 -0
  238. package/AISB/image/017_aisb.t3.017_multimodalglp.jpg +0 -0
  239. package/AISB/image/018_aisb.t3.018_cotsynth.jpg +0 -0
  240. package/AISB/image/019_aisb.t3.019_dyscaleut.jpg +0 -0
  241. package/AISB/image/020_aisb.t3.020_aristotle.jpg +0 -0
  242. package/AISB/image/021_aisb.t3.021_tokenrecycling.jpg +0 -0
  243. package/AISB/image/022_aisb.t3.022_chainofreasoning.jpg +0 -0
  244. package/AISB/image/023_aisb.t3.023_guidedembed.jpg +0 -0
  245. package/AISB/image/024_aisb.t3.024_outputcentric.jpg +0 -0
  246. package/AISB/image/025_aisb.t3.025_deeper.jpg +0 -0
  247. package/AISB/image/026_aisb.t3.026_gartkg.jpg +0 -0
  248. package/AISB/image/027_aisb.t3.027_citeeval.jpg +0 -0
  249. package/AISB/image/028_aisb.t3.028_sbam.jpg +0 -0
  250. package/AISB/image/029_aisb.t3.029_cdqgeoembed.jpg +0 -0
  251. package/AISB/image/030_aisb.t3.030_processrm.jpg +0 -0
  252. package/AISB/image/031_aisb.t3.031_circuitstability.jpg +0 -0
  253. package/AISB/image/032_aisb.t3.032_ptsolver.jpg +0 -0
  254. package/AISB/image/033_aisb.t3.033_gcse.jpg +0 -0
  255. package/AISB/image/034_aisb.t3.034_ensemblewm.jpg +0 -0
  256. package/AISB/image/035_aisb.t3.035_moralvalueswa.jpg +0 -0
  257. package/AISB/image/036_aisb.t3.036_weakstrongpref.jpg +0 -0
  258. package/AISB/image/037_aisb.t3.037_dementiamask.jpg +0 -0
  259. package/AISB/image/038_aisb.t3.038_tinysam.jpg +0 -0
  260. package/AISB/image/039_aisb.t3.039_calf.jpg +0 -0
  261. package/AISB/image/040_aisb.t3.040_graniteguardian.jpg +0 -0
  262. package/AISB/image/041_aisb.t3.041_amdm.jpg +0 -0
  263. package/AISB/image/042_aisb.t3.042_xpatch.jpg +0 -0
  264. package/AISB/image/043_aisb.t3.043_vhm.jpg +0 -0
  265. package/AISB/image/044_aisb.t3.044_rgvi.jpg +0 -0
  266. package/AISB/image/045_aisb.t3.045_pslstm.jpg +0 -0
  267. package/AISB/image/046_aisb.t3.046_nonstatts.jpg +0 -0
  268. package/AISB/image/047_aisb.t3.047_timepfn.jpg +0 -0
  269. package/AISB/image/048_aisb.t3.048_proxyspex.jpg +0 -0
  270. package/AISB/image/049_aisb.t3.049_hogwildinference.jpg +0 -0
  271. package/AISB/image/050_aisb.t3.050_causalpfn.jpg +0 -0
  272. package/AISB/image/051_aisb.t3.051_flashtp.jpg +0 -0
  273. package/AISB/image/052_aisb.t3.052_nsdiff.jpg +0 -0
  274. package/AISB/image/053_aisb.t3.053_k2vae.jpg +0 -0
  275. package/AISB/image/054_aisb.t3.054_timebase.jpg +0 -0
  276. package/AISB/image/055_aisb.t3.055_csbrain.jpg +0 -0
  277. package/AISB/image/056_aisb.t3.056_infosam.jpg +0 -0
  278. package/AISB/image/057_aisb.t3.057_mdreid.jpg +0 -0
  279. package/AISB/image/058_aisb.t3.058_mindglitch.jpg +0 -0
  280. package/AISB/image/059_aisb.t3.059_selfsupervised.jpg +0 -0
  281. package/AISB/image/060_aisb.t3.060_iaggad.jpg +0 -0
  282. package/AISB/image/061_aisb.t3.061_hsgkn.jpg +0 -0
  283. package/AISB/image/062_aisb.t3.062_visionts.jpg +0 -0
  284. package/AISB/image/063_aisb.t3.063_tsrag.jpg +0 -0
  285. package/AISB/image/064_aisb.t3.064_pir.jpg +0 -0
  286. package/AISB/image/065_aisb.t3.065_proteinbinding.jpg +0 -0
  287. package/AISB/image/066_aisb.t3.066_tropicalattention.jpg +0 -0
  288. package/AISB/image/067_aisb.t3.067_kanad.jpg +0 -0
  289. package/AISB/image/068_aisb.t3.068_sempo.jpg +0 -0
  290. package/AISB/image/069_aisb.t3.069_treehfd.jpg +0 -0
  291. package/AISB/image/070_aisb.t3.070_certifiedunlearning.jpg +0 -0
  292. package/AISB/image/071_aisb.t3.071_neuralmjd.jpg +0 -0
  293. package/AISB/image/072_aisb.t3.072_fedgmt.jpg +0 -0
  294. package/AISB/image/073_aisb.t3.073_rld.jpg +0 -0
  295. package/AISB/image/074_aisb.t3.074_lsvi.jpg +0 -0
  296. package/AISB/image/075_aisb.t3.075_treeslicedentropy.jpg +0 -0
  297. package/AISB/image/076_aisb.t3.076_aanet.jpg +0 -0
  298. package/AISB/image/077_aisb.t3.077_cmnn.jpg +0 -0
  299. package/AISB/image/078_aisb.t3.078_conformalanomaly.jpg +0 -0
  300. package/AISB/image/079_aisb.t3.079_dpfkmeans.jpg +0 -0
  301. package/AISB/image/080_aisb.t3.080_latentscorereweight.jpg +0 -0
  302. package/AISB/image/081_aisb.t3.081_qmamba.jpg +0 -0
  303. package/AISB/image/082_aisb.t3.082_onlinellmrouting.jpg +0 -0
  304. package/AISB/image/083_aisb.t3.083_starformer.jpg +0 -0
  305. package/AISB/image/084_aisb.t3.084_ift.jpg +0 -0
  306. package/AISB/image/085_aisb.t3.085_neuralsurv.jpg +0 -0
  307. package/AISB/image/086_aisb.t3.086_stella.jpg +0 -0
  308. package/AISB/image/087_aisb.t3.087_moses.jpg +0 -0
  309. package/AISB/image/088_aisb.t3.088_channelnorm.jpg +0 -0
  310. package/AISB/image/089_aisb.t3.089_causalvelocity.jpg +0 -0
  311. package/AISB/image/090_aisb.t3.090_rstib.jpg +0 -0
  312. package/AISB/image/091_aisb.t3.091_timeawarecausal.jpg +0 -0
  313. package/AISB/image/092_aisb.t3.092_kmeanslocalopt.jpg +0 -0
  314. package/AISB/image/093_aisb.t3.093_fedwmsam.jpg +0 -0
  315. package/AISB/image/094_aisb.t3.094_boundre.jpg +0 -0
  316. package/AISB/image/095_aisb.t3.095_fastfeaturecp.jpg +0 -0
  317. package/AISB/image/096_aisb.t3.096_m3svm.jpg +0 -0
  318. package/AISB/image/097_aisb.t3.097_wassersteintl.jpg +0 -0
  319. package/AISB/image/098_aisb.t3.098_xmahalanobis.jpg +0 -0
  320. package/AISB/image/099_aisb.t3.099_ollalanding.jpg +0 -0
  321. package/AISB/image/100_aisb.t3.100_invmissingdata.jpg +0 -0
  322. package/AISB/image/101_aisb.t3.101_acia.jpg +0 -0
  323. package/AISB/image/102_aisb.t3.102_stochasticff.jpg +0 -0
  324. package/AISB/image/103_aisb.t3.103_qdcp.jpg +0 -0
  325. package/AISB/image/104_aisb.t3.104_balancedactiveinf.jpg +0 -0
  326. package/AISB/image/105_aisb.t3.105_binaryclasseval.jpg +0 -0
  327. package/AISB/image/106_aisb.t1.reasoning_lite.jpg +0 -0
  328. package/AISB/image/107_aisb.t2.paper_audit.jpg +0 -0
  329. package/AISB/image/108_aisb.t3.multi_gpu_search.jpg +0 -0
  330. package/AISB/image/109_aisb.t3.tdc_admet.jpg +0 -0
  331. package/AISB/image/aisb.b1.agentic_coding.svg +16 -0
  332. package/AISB/image/aisb.b10.climate_earth.svg +16 -0
  333. package/AISB/image/aisb.b11.model_efficiency.svg +16 -0
  334. package/AISB/image/aisb.b12.embodied_ai.svg +16 -0
  335. package/AISB/image/aisb.b2.agent_systems.svg +16 -0
  336. package/AISB/image/aisb.b3.self_evolving_rl.svg +16 -0
  337. package/AISB/image/aisb.b4.lm_reasoning.svg +16 -0
  338. package/AISB/image/aisb.b5.math_proof.svg +16 -0
  339. package/AISB/image/aisb.b6.research_process.svg +16 -0
  340. package/AISB/image/aisb.b7.multimodal_fusion.svg +16 -0
  341. package/AISB/image/aisb.b8.lifesci_drug.svg +16 -0
  342. package/AISB/image/aisb.b9.material_science.svg +16 -0
  343. package/README.md +196 -32
  344. package/bin/ds.js +924 -66
  345. package/docs/en/00_QUICK_START.md +195 -18
  346. package/docs/en/01_SETTINGS_REFERENCE.md +468 -96
  347. package/docs/en/02_START_RESEARCH_GUIDE.md +26 -5
  348. package/docs/en/03_QQ_CONNECTOR_GUIDE.md +14 -3
  349. package/docs/en/04_LINGZHU_CONNECTOR_GUIDE.md +2 -0
  350. package/docs/en/05_TUI_GUIDE.md +171 -2
  351. package/docs/en/07_MEMORY_AND_MCP.md +38 -2
  352. package/docs/en/09_DOCTOR.md +78 -7
  353. package/docs/en/10_WEIXIN_CONNECTOR_GUIDE.md +38 -1
  354. package/docs/en/11_LICENSE_AND_RISK.md +4 -0
  355. package/docs/en/12_GUIDED_WORKFLOW_TOUR.md +15 -0
  356. package/docs/en/14_PROMPT_SKILLS_AND_MCP_GUIDE.md +9 -0
  357. package/docs/en/15_CODEX_PROVIDER_SETUP.md +624 -180
  358. package/docs/en/16_TELEGRAM_CONNECTOR_GUIDE.md +14 -0
  359. package/docs/en/17_WHATSAPP_CONNECTOR_GUIDE.md +14 -0
  360. package/docs/en/18_FEISHU_CONNECTOR_GUIDE.md +14 -0
  361. package/docs/en/21_LOCAL_MODEL_BACKENDS_GUIDE.md +386 -0
  362. package/docs/en/22_BENCHSTORE_YAML_REFERENCE.md +469 -0
  363. package/docs/en/23_BENCHSTORE_GITHUB_RELEASES_SPEC.md +316 -0
  364. package/docs/en/24_CLAUDE_CODE_PROVIDER_SETUP.md +469 -0
  365. package/docs/en/25_OPENCODE_PROVIDER_SETUP.md +653 -0
  366. package/docs/en/26_CITATION_AND_ATTRIBUTION.md +119 -0
  367. package/docs/en/27_KIMI_CODE_PROVIDER_SETUP.md +180 -0
  368. package/docs/en/28_DISCORD_CONNECTOR_GUIDE.md +61 -0
  369. package/docs/en/29_SLACK_CONNECTOR_GUIDE.md +60 -0
  370. package/docs/en/30_SETTINGS_CONTROL_CENTER_GUIDE.md +371 -0
  371. package/docs/en/{19_LOCAL_BROWSER_AUTH.md → 31_LOCAL_BROWSER_AUTH.md} +1 -1
  372. package/docs/en/32_WINDOWS_WSL2_DEPLOYMENT_GUIDE.md +273 -0
  373. package/docs/en/33_WORKSPACE_EXPLORER_QA.md +121 -0
  374. package/docs/en/91_DEVELOPMENT.md +266 -0
  375. package/docs/en/99_ACKNOWLEDGEMENTS.md +24 -19
  376. package/docs/en/README.md +48 -7
  377. package/docs/images/admin/admin-connectors-health-en.png +0 -0
  378. package/docs/images/admin/admin-controllers-en.png +0 -0
  379. package/docs/images/admin/admin-diagnostics-en.png +0 -0
  380. package/docs/images/admin/admin-errors-en.png +0 -0
  381. package/docs/images/admin/admin-issues-en.png +0 -0
  382. package/docs/images/admin/admin-logs-en.png +0 -0
  383. package/docs/images/admin/admin-quest-detail-en.png +0 -0
  384. package/docs/images/admin/admin-quests-en.png +0 -0
  385. package/docs/images/admin/admin-repairs-en.png +0 -0
  386. package/docs/images/admin/admin-runtime-en.png +0 -0
  387. package/docs/images/admin/admin-search-en.png +0 -0
  388. package/docs/images/admin/admin-stats-en.png +0 -0
  389. package/docs/images/admin/admin-summary-en.png +0 -0
  390. package/docs/images/connectors/connector-discord-en.png +0 -0
  391. package/docs/images/connectors/connector-feishu-en.png +0 -0
  392. package/docs/images/connectors/connector-lingzhu-en.png +0 -0
  393. package/docs/images/connectors/connector-qq-en.png +0 -0
  394. package/docs/images/connectors/connector-slack-en.png +0 -0
  395. package/docs/images/connectors/connector-telegram-en.png +0 -0
  396. package/docs/images/connectors/connector-weixin-en.png +0 -0
  397. package/docs/images/connectors/connector-whatsapp-en.png +0 -0
  398. package/docs/images/settings/settings-baselines-en.png +0 -0
  399. package/docs/images/settings/settings-config-en.png +0 -0
  400. package/docs/images/settings/settings-connectors-overview-en.png +0 -0
  401. package/docs/images/settings/settings-deepxiv-en.png +0 -0
  402. package/docs/images/settings/settings-mcp-servers-en.png +0 -0
  403. package/docs/images/settings/settings-plugins-en.png +0 -0
  404. package/docs/images/settings/settings-runners-en.png +0 -0
  405. package/docs/zh/00_QUICK_START.md +142 -18
  406. package/docs/zh/01_SETTINGS_REFERENCE.md +219 -98
  407. package/docs/zh/02_START_RESEARCH_GUIDE.md +26 -5
  408. package/docs/zh/05_TUI_GUIDE.md +171 -2
  409. package/docs/zh/07_MEMORY_AND_MCP.md +29 -2
  410. package/docs/zh/09_DOCTOR.md +54 -8
  411. package/docs/zh/10_WEIXIN_CONNECTOR_GUIDE.md +24 -1
  412. package/docs/zh/11_LICENSE_AND_RISK.md +4 -0
  413. package/docs/zh/12_GUIDED_WORKFLOW_TOUR.md +15 -0
  414. package/docs/zh/14_PROMPT_SKILLS_AND_MCP_GUIDE.md +9 -0
  415. package/docs/zh/15_CODEX_PROVIDER_SETUP.md +552 -181
  416. package/docs/zh/21_LOCAL_MODEL_BACKENDS_GUIDE.md +384 -0
  417. package/docs/zh/22_BENCHSTORE_YAML_REFERENCE.md +459 -0
  418. package/docs/zh/23_BENCHSTORE_GITHUB_RELEASES_SPEC.md +287 -0
  419. package/docs/zh/23_CLAUDE_RUNNER_GUIDE.md +103 -0
  420. package/docs/zh/24_CLAUDE_CODE_PROVIDER_SETUP.md +460 -0
  421. package/docs/zh/25_OPENCODE_PROVIDER_SETUP.md +660 -0
  422. package/docs/zh/26_CITATION_AND_ATTRIBUTION.md +102 -0
  423. package/docs/zh/27_KIMI_CODE_PROVIDER_SETUP.md +51 -0
  424. package/docs/zh/{19_LOCAL_BROWSER_AUTH.md → 31_LOCAL_BROWSER_AUTH.md} +1 -1
  425. package/docs/zh/32_WINDOWS_WSL2_DEPLOYMENT_GUIDE.md +264 -0
  426. package/docs/zh/33_WORKSPACE_EXPLORER_QA.md +127 -0
  427. package/docs/zh/99_ACKNOWLEDGEMENTS.md +23 -19
  428. package/docs/zh/README.md +33 -7
  429. package/install.sh +168 -20
  430. package/package.json +5 -1
  431. package/pyproject.toml +2 -1
  432. package/src/deepscientist/__init__.py +1 -1
  433. package/src/deepscientist/acp/envelope.py +13 -0
  434. package/src/deepscientist/admin/__init__.py +3 -0
  435. package/src/deepscientist/admin/charts.py +681 -0
  436. package/src/deepscientist/admin/logs.py +119 -0
  437. package/src/deepscientist/admin/repairs.py +217 -0
  438. package/src/deepscientist/admin/service.py +1310 -0
  439. package/src/deepscientist/admin/system_info.py +700 -0
  440. package/src/deepscientist/admin/tasks.py +465 -0
  441. package/src/deepscientist/admin/tool_metrics.py +600 -0
  442. package/src/deepscientist/artifact/guidance.py +8 -4
  443. package/src/deepscientist/artifact/schemas.py +115 -0
  444. package/src/deepscientist/artifact/service.py +4268 -260
  445. package/src/deepscientist/bash_exec/monitor.py +30 -3
  446. package/src/deepscientist/bash_exec/service.py +134 -1
  447. package/src/deepscientist/benchstore/__init__.py +4 -0
  448. package/src/deepscientist/benchstore/prompt_builder.py +224 -0
  449. package/src/deepscientist/benchstore/service.py +1716 -0
  450. package/src/deepscientist/bridges/connectors.py +8 -2
  451. package/src/deepscientist/channels/weixin_ilink.py +8 -1
  452. package/src/deepscientist/cli.py +92 -17
  453. package/src/deepscientist/codex_cli_compat.py +187 -74
  454. package/src/deepscientist/config/models.py +82 -11
  455. package/src/deepscientist/config/service.py +1077 -93
  456. package/src/deepscientist/connector/weixin_support.py +48 -17
  457. package/src/deepscientist/daemon/api/handlers.py +827 -235
  458. package/src/deepscientist/daemon/api/router.py +81 -1
  459. package/src/deepscientist/daemon/app.py +1512 -85
  460. package/src/deepscientist/diagnostics/__init__.py +6 -0
  461. package/src/deepscientist/diagnostics/runner_failures.py +277 -0
  462. package/src/deepscientist/doctor.py +407 -56
  463. package/src/deepscientist/evidence_packets.py +590 -0
  464. package/src/deepscientist/home.py +52 -4
  465. package/src/deepscientist/kimi_cli_compat.py +50 -0
  466. package/src/deepscientist/latex_runtime.py +2 -2
  467. package/src/deepscientist/mcp/context.py +2 -0
  468. package/src/deepscientist/mcp/schemas.py +114 -0
  469. package/src/deepscientist/mcp/server.py +1566 -126
  470. package/src/deepscientist/memory/service.py +203 -16
  471. package/src/deepscientist/process_control.py +8 -1
  472. package/src/deepscientist/prompts/builder.py +850 -88
  473. package/src/deepscientist/quest/__init__.py +2 -2
  474. package/src/deepscientist/quest/layout.py +12 -1
  475. package/src/deepscientist/quest/node_traces.py +10 -0
  476. package/src/deepscientist/quest/service.py +1852 -161
  477. package/src/deepscientist/quest/stage_views.py +1 -1
  478. package/src/deepscientist/runners/__init__.py +18 -0
  479. package/src/deepscientist/runners/base.py +89 -1
  480. package/src/deepscientist/runners/builtins.py +13 -1
  481. package/src/deepscientist/runners/claude.py +391 -0
  482. package/src/deepscientist/runners/codex.py +480 -35
  483. package/src/deepscientist/runners/codex_telemetry.py +127 -0
  484. package/src/deepscientist/runners/kimi.py +334 -0
  485. package/src/deepscientist/runners/metadata.py +68 -0
  486. package/src/deepscientist/runners/opencode.py +414 -0
  487. package/src/deepscientist/runners/runtime_overrides.py +100 -0
  488. package/src/deepscientist/runners/simple_cli.py +538 -0
  489. package/src/deepscientist/runtime_storage.py +303 -0
  490. package/src/deepscientist/shared.py +80 -16
  491. package/src/deepscientist/skills/installer.py +37 -0
  492. package/src/deepscientist/skills/registry.py +2 -0
  493. package/src/deepscientist/tinytex.py +2 -2
  494. package/src/deepscientist/tui.py +10 -3
  495. package/src/prompts/benchstore/system.md +77 -0
  496. package/src/prompts/connectors/qq.md +33 -2
  497. package/src/prompts/connectors/weixin.md +208 -23
  498. package/src/prompts/contracts/admin_ops.md +74 -0
  499. package/src/prompts/contracts/admin_ops_knowledge.md +138 -0
  500. package/src/prompts/contracts/shared_interaction.md +5 -10
  501. package/src/prompts/start_setup/system.md +422 -0
  502. package/src/prompts/system.md +411 -304
  503. package/src/prompts/system_copilot.md +89 -0
  504. package/src/skills/analysis-campaign/SKILL.md +239 -578
  505. package/src/skills/analysis-campaign/references/artifact-flow-examples.md +102 -0
  506. package/src/skills/analysis-campaign/references/boundary-cases.md +98 -0
  507. package/src/skills/analysis-campaign/references/campaign-checklist-template.md +39 -24
  508. package/src/skills/analysis-campaign/references/campaign-design.md +26 -10
  509. package/src/skills/analysis-campaign/references/campaign-plan-template.md +53 -54
  510. package/src/skills/analysis-campaign/references/operational-guidance.md +97 -0
  511. package/src/skills/analysis-campaign/references/writing-facing-slice-examples.md +10 -20
  512. package/src/skills/baseline/SKILL.md +183 -461
  513. package/src/skills/baseline/references/artifact-flow-examples.md +106 -0
  514. package/src/skills/baseline/references/artifact-payload-examples.md +1 -1
  515. package/src/skills/baseline/references/baseline-checklist-template.md +27 -35
  516. package/src/skills/baseline/references/baseline-plan-template.md +37 -76
  517. package/src/skills/baseline/references/boundary-cases.md +86 -0
  518. package/src/skills/baseline/references/codebase-audit-checklist.md +2 -6
  519. package/src/skills/baseline/references/comparability-contract.md +7 -12
  520. package/src/skills/baseline/references/operational-guidance.md +56 -0
  521. package/src/skills/baseline/references/route-selection.md +5 -25
  522. package/src/skills/decision/SKILL.md +113 -306
  523. package/src/skills/decision/references/checkpoint-memory-template.md +47 -0
  524. package/src/skills/decision/references/operational-guidance.md +94 -0
  525. package/src/skills/decision/references/research-route-criteria.md +7 -8
  526. package/src/skills/decision/references/strategic-decision-template.md +13 -26
  527. package/src/skills/experiment/SKILL.md +132 -670
  528. package/src/skills/experiment/references/execution-playbook.md +374 -0
  529. package/src/skills/experiment/references/main-experiment-checklist-template.md +26 -2
  530. package/src/skills/experiment/references/main-experiment-plan-template.md +28 -17
  531. package/src/skills/experiment/references/operational-guidance.md +108 -0
  532. package/src/skills/finalize/SKILL.md +62 -0
  533. package/src/skills/finalize/references/checkpoint-memory-template.md +49 -0
  534. package/src/skills/finalize/references/resume-packet-template.md +7 -0
  535. package/src/skills/idea/SKILL.md +228 -15
  536. package/src/skills/idea/references/controlled-brainstorming-playbook.md +78 -0
  537. package/src/skills/idea/references/current-board-packet-template.md +61 -0
  538. package/src/skills/idea/references/high-value-idea-sourcing.md +119 -0
  539. package/src/skills/idea/references/idea-generation-playbook.md +21 -0
  540. package/src/skills/idea/references/idea-thinking-flow.md +6 -0
  541. package/src/skills/idea/references/literature-survey-template.md +3 -0
  542. package/src/skills/idea/references/objective-contract-template.md +54 -0
  543. package/src/skills/idea/references/outline-seeding-example.md +56 -0
  544. package/src/skills/idea/references/pre-idea-draft-template.md +105 -0
  545. package/src/skills/idea/references/related-work-playbook.md +75 -2
  546. package/src/skills/idea/references/research-history-playbook.md +114 -0
  547. package/src/skills/idea/references/selection-gate.md +58 -6
  548. package/src/skills/intake-audit/SKILL.md +43 -2
  549. package/src/skills/intake-audit/references/state-audit-template.md +10 -0
  550. package/src/skills/nature-data/SKILL.md +128 -0
  551. package/src/skills/nature-data/UPSTREAM_LICENSE.txt +21 -0
  552. package/src/skills/nature-data/agents/openai.yaml +4 -0
  553. package/src/skills/nature-data/references/chinese-author-alignment.md +84 -0
  554. package/src/skills/nature-data/references/fair-metadata-checklist.md +105 -0
  555. package/src/skills/nature-data/references/policy-principles.md +103 -0
  556. package/src/skills/nature-data/references/repository-and-identifiers.md +96 -0
  557. package/src/skills/nature-data/references/source-basis.md +54 -0
  558. package/src/skills/nature-data/references/statement-patterns.md +153 -0
  559. package/src/skills/nature-figure/SKILL.md +197 -0
  560. package/src/skills/nature-figure/UPSTREAM_LICENSE.txt +21 -0
  561. package/src/skills/nature-figure/agents/openai.yaml +4 -0
  562. package/src/skills/nature-figure/evals/evals.json +37 -0
  563. package/src/skills/nature-figure/references/api.md +428 -0
  564. package/src/skills/nature-figure/references/backend-selection.md +100 -0
  565. package/src/skills/nature-figure/references/chart-types.md +281 -0
  566. package/src/skills/nature-figure/references/common-patterns.md +349 -0
  567. package/src/skills/nature-figure/references/design-theory.md +436 -0
  568. package/src/skills/nature-figure/references/figure-contract.md +93 -0
  569. package/src/skills/nature-figure/references/nature-2026-observations.md +112 -0
  570. package/src/skills/nature-figure/references/qa-contract.md +119 -0
  571. package/src/skills/nature-figure/references/r-template-index.md +66 -0
  572. package/src/skills/nature-figure/references/r-workflow.md +161 -0
  573. package/src/skills/nature-figure/references/tutorials.md +250 -0
  574. package/src/skills/nature-paper2ppt/SKILL.md +507 -0
  575. package/src/skills/nature-paper2ppt/UPSTREAM_LICENSE.txt +21 -0
  576. package/src/skills/nature-paper2ppt/agents/openai.yaml +4 -0
  577. package/src/skills/nature-polishing/SKILL.md +385 -0
  578. package/src/skills/nature-polishing/UPSTREAM_LICENSE.txt +21 -0
  579. package/src/skills/nature-polishing/agents/openai.yaml +4 -0
  580. package/src/skills/nature-polishing/references/phrasebank-playbook.md +162 -0
  581. package/src/skills/nature-polishing/references/section-moves.md +240 -0
  582. package/src/skills/nature-polishing/references/style-guardrails.md +94 -0
  583. package/src/skills/nature-polishing/references/writing-strategy.md +148 -0
  584. package/src/skills/optimize/SKILL.md +177 -1568
  585. package/src/skills/optimize/references/brief-shaping-playbook.md +95 -0
  586. package/src/skills/optimize/references/candidate-board-template.md +13 -0
  587. package/src/skills/optimize/references/candidate-ranking-template.md +51 -0
  588. package/src/skills/optimize/references/codegen-route-playbook.md +50 -0
  589. package/src/skills/optimize/references/debug-response-template.md +29 -0
  590. package/src/skills/optimize/references/frontier-review-template.md +32 -0
  591. package/src/skills/optimize/references/fusion-playbook.md +36 -0
  592. package/src/skills/optimize/references/method-brief-template.md +73 -0
  593. package/src/skills/optimize/references/operational-guidance.md +621 -0
  594. package/src/skills/optimize/references/optimization-memory-template.md +30 -0
  595. package/src/skills/optimize/references/optimize-checklist-template.md +18 -0
  596. package/src/skills/optimize/references/plateau-response-playbook.md +28 -0
  597. package/src/skills/optimize/references/prompt-patterns.md +49 -0
  598. package/src/skills/paper-outline/SKILL.md +227 -0
  599. package/src/skills/paper-outline/references/outline-patterns.md +87 -0
  600. package/src/skills/paper-plot/SKILL.md +79 -0
  601. package/src/skills/paper-plot/agents/openai.yaml +4 -0
  602. package/src/skills/paper-plot/references/bar_grouped_hatch.md +96 -0
  603. package/src/skills/paper-plot/references/bar_paired_delta.md +72 -0
  604. package/src/skills/paper-plot/references/line_confidence_band.md +75 -0
  605. package/src/skills/paper-plot/references/line_loss_with_inset.md +65 -0
  606. package/src/skills/paper-plot/references/line_training_curve.md +44 -0
  607. package/src/skills/paper-plot/references/radar_dual_series.md +59 -0
  608. package/src/skills/paper-plot/references/scatter_broken_axis.md +59 -0
  609. package/src/skills/paper-plot/references/scatter_tsne_cluster.md +72 -0
  610. package/src/skills/paper-plot/scripts/bar_memevolve.py +109 -0
  611. package/src/skills/paper-plot/scripts/bar_spice.py +166 -0
  612. package/src/skills/paper-plot/scripts/line_aime.py +94 -0
  613. package/src/skills/paper-plot/scripts/line_loss_inset.py +157 -0
  614. package/src/skills/paper-plot/scripts/line_selfdistill.py +168 -0
  615. package/src/skills/paper-plot/scripts/radar_dora.py +151 -0
  616. package/src/skills/paper-plot/scripts/scatter_break.py +169 -0
  617. package/src/skills/paper-plot/scripts/scatter_tsne.py +133 -0
  618. package/src/skills/rebuttal/SKILL.md +9 -0
  619. package/src/skills/references/tool-usage-by-stage.md +438 -0
  620. package/src/skills/review/SKILL.md +105 -7
  621. package/src/skills/science/PROVENANCE.md +44 -0
  622. package/src/skills/science/SKILL.md +137 -0
  623. package/src/skills/science/references/artifact-science-tool.md +110 -0
  624. package/src/skills/science/references/claim-type-discipline.md +56 -0
  625. package/src/skills/science/references/domain-index.md +422 -0
  626. package/src/skills/science/references/hpc-via-bash-exec.md +42 -0
  627. package/src/skills/science/references/package-check-playbook.md +64 -0
  628. package/src/skills/science/references/package-index.min.json +3616 -0
  629. package/src/skills/science/references/packages/abinit.md +80 -0
  630. package/src/skills/science/references/packages/acts.md +73 -0
  631. package/src/skills/science/references/packages/aiida-core.md +80 -0
  632. package/src/skills/science/references/packages/alamode.md +80 -0
  633. package/src/skills/science/references/packages/amuse.md +88 -0
  634. package/src/skills/science/references/packages/anndata.md +88 -0
  635. package/src/skills/science/references/packages/arbor.md +80 -0
  636. package/src/skills/science/references/packages/arc.md +73 -0
  637. package/src/skills/science/references/packages/astropy.md +88 -0
  638. package/src/skills/science/references/packages/astroquery.md +88 -0
  639. package/src/skills/science/references/packages/atomate2.md +80 -0
  640. package/src/skills/science/references/packages/atomsmltr.md +73 -0
  641. package/src/skills/science/references/packages/awkward.md +73 -0
  642. package/src/skills/science/references/packages/batman.md +88 -0
  643. package/src/skills/science/references/packages/biopython.md +88 -0
  644. package/src/skills/science/references/packages/bloqade.md +73 -0
  645. package/src/skills/science/references/packages/brian2.md +73 -0
  646. package/src/skills/science/references/packages/bullet3.md +73 -0
  647. package/src/skills/science/references/packages/calculix.md +80 -0
  648. package/src/skills/science/references/packages/cantera.md +73 -0
  649. package/src/skills/science/references/packages/cavity-md-ipi.md +80 -0
  650. package/src/skills/science/references/packages/ccdproc.md +88 -0
  651. package/src/skills/science/references/packages/celerite2.md +88 -0
  652. package/src/skills/science/references/packages/cellrank.md +73 -0
  653. package/src/skills/science/references/packages/cesm.md +80 -0
  654. package/src/skills/science/references/packages/chemicals.md +73 -0
  655. package/src/skills/science/references/packages/chempy.md +73 -0
  656. package/src/skills/science/references/packages/cirq.md +73 -0
  657. package/src/skills/science/references/packages/coffea.md +73 -0
  658. package/src/skills/science/references/packages/cp2k.md +88 -0
  659. package/src/skills/science/references/packages/custodian.md +80 -0
  660. package/src/skills/science/references/packages/dart.md +73 -0
  661. package/src/skills/science/references/packages/datamol.md +88 -0
  662. package/src/skills/science/references/packages/dd4hep.md +73 -0
  663. package/src/skills/science/references/packages/dealii.md +80 -0
  664. package/src/skills/science/references/packages/deepchem.md +88 -0
  665. package/src/skills/science/references/packages/delphes.md +73 -0
  666. package/src/skills/science/references/packages/devito.md +80 -0
  667. package/src/skills/science/references/packages/dftb.md +88 -0
  668. package/src/skills/science/references/packages/dftd4.md +88 -0
  669. package/src/skills/science/references/packages/dftk-jl.md +80 -0
  670. package/src/skills/science/references/packages/dolfinx.md +80 -0
  671. package/src/skills/science/references/packages/drake.md +73 -0
  672. package/src/skills/science/references/packages/dumux.md +73 -0
  673. package/src/skills/science/references/packages/elk.md +80 -0
  674. package/src/skills/science/references/packages/elmerfem.md +80 -0
  675. package/src/skills/science/references/packages/enzo-e.md +88 -0
  676. package/src/skills/science/references/packages/espresso.md +80 -0
  677. package/src/skills/science/references/packages/exoplanet.md +88 -0
  678. package/src/skills/science/references/packages/fairroot.md +73 -0
  679. package/src/skills/science/references/packages/fbpic.md +80 -0
  680. package/src/skills/science/references/packages/fdtdbath-meep.md +80 -0
  681. package/src/skills/science/references/packages/geant4.md +73 -0
  682. package/src/skills/science/references/packages/geosx.md +80 -0
  683. package/src/skills/science/references/packages/gprmax.md +80 -0
  684. package/src/skills/science/references/packages/gromacs.md +80 -0
  685. package/src/skills/science/references/packages/gwaslab.md +73 -0
  686. package/src/skills/science/references/packages/gz-sim.md +73 -0
  687. package/src/skills/science/references/packages/hail.md +88 -0
  688. package/src/skills/science/references/packages/hiphive.md +80 -0
  689. package/src/skills/science/references/packages/hoomd-blue.md +80 -0
  690. package/src/skills/science/references/packages/itensor.md +73 -0
  691. package/src/skills/science/references/packages/itensors-jl.md +73 -0
  692. package/src/skills/science/references/packages/jdftx.md +73 -0
  693. package/src/skills/science/references/packages/jobflow.md +80 -0
  694. package/src/skills/science/references/packages/kadanoffbaym-jl.md +73 -0
  695. package/src/skills/science/references/packages/kite.md +80 -0
  696. package/src/skills/science/references/packages/kratos.md +80 -0
  697. package/src/skills/science/references/packages/kwant.md +73 -0
  698. package/src/skills/science/references/packages/lammps.md +80 -0
  699. package/src/skills/science/references/packages/lightkurve.md +88 -0
  700. package/src/skills/science/references/packages/limix.md +73 -0
  701. package/src/skills/science/references/packages/maxwelllink.md +80 -0
  702. package/src/skills/science/references/packages/mcdc.md +73 -0
  703. package/src/skills/science/references/packages/meep.md +80 -0
  704. package/src/skills/science/references/packages/mfem.md +80 -0
  705. package/src/skills/science/references/packages/mitgcm.md +73 -0
  706. package/src/skills/science/references/packages/modflow6.md +73 -0
  707. package/src/skills/science/references/packages/molecool.md +73 -0
  708. package/src/skills/science/references/packages/mom6.md +73 -0
  709. package/src/skills/science/references/packages/moose.md +80 -0
  710. package/src/skills/science/references/packages/mpas-model.md +73 -0
  711. package/src/skills/science/references/packages/mujoco.md +73 -0
  712. package/src/skills/science/references/packages/mumax3.md +73 -0
  713. package/src/skills/science/references/packages/nekrs.md +80 -0
  714. package/src/skills/science/references/packages/nessi.md +73 -0
  715. package/src/skills/science/references/packages/nest-simulator.md +73 -0
  716. package/src/skills/science/references/packages/netket.md +73 -0
  717. package/src/skills/science/references/packages/neuron.md +73 -0
  718. package/src/skills/science/references/packages/nextflow.md +88 -0
  719. package/src/skills/science/references/packages/nwchem.md +88 -0
  720. package/src/skills/science/references/packages/openbabel.md +88 -0
  721. package/src/skills/science/references/packages/openems.md +80 -0
  722. package/src/skills/science/references/packages/openff-toolkit.md +88 -0
  723. package/src/skills/science/references/packages/openfoam-dev.md +80 -0
  724. package/src/skills/science/references/packages/openmc.md +73 -0
  725. package/src/skills/science/references/packages/openmm.md +80 -0
  726. package/src/skills/science/references/packages/openmoc.md +73 -0
  727. package/src/skills/science/references/packages/openmx.md +80 -0
  728. package/src/skills/science/references/packages/opensees.md +80 -0
  729. package/src/skills/science/references/packages/opensn.md +80 -0
  730. package/src/skills/science/references/packages/opm-simulators.md +73 -0
  731. package/src/skills/science/references/packages/oqupy.md +73 -0
  732. package/src/skills/science/references/packages/packmol.md +80 -0
  733. package/src/skills/science/references/packages/palabos.md +80 -0
  734. package/src/skills/science/references/packages/parflow.md +80 -0
  735. package/src/skills/science/references/packages/pennylane.md +88 -0
  736. package/src/skills/science/references/packages/perceval.md +73 -0
  737. package/src/skills/science/references/packages/phono3py.md +73 -0
  738. package/src/skills/science/references/packages/phonopy.md +73 -0
  739. package/src/skills/science/references/packages/photutils.md +88 -0
  740. package/src/skills/science/references/packages/picongpu.md +80 -0
  741. package/src/skills/science/references/packages/plink-ng.md +88 -0
  742. package/src/skills/science/references/packages/precice.md +73 -0
  743. package/src/skills/science/references/packages/psc.md +80 -0
  744. package/src/skills/science/references/packages/psi4.md +88 -0
  745. package/src/skills/science/references/packages/pybinding.md +73 -0
  746. package/src/skills/science/references/packages/pyfr.md +80 -0
  747. package/src/skills/science/references/packages/pyhf.md +73 -0
  748. package/src/skills/science/references/packages/pyiron_base.md +80 -0
  749. package/src/skills/science/references/packages/pylcp.md +73 -0
  750. package/src/skills/science/references/packages/pylith.md +80 -0
  751. package/src/skills/science/references/packages/pynbody.md +88 -0
  752. package/src/skills/science/references/packages/pysam.md +88 -0
  753. package/src/skills/science/references/packages/pyscf.md +88 -0
  754. package/src/skills/science/references/packages/q-e.md +73 -0
  755. package/src/skills/science/references/packages/qibo.md +73 -0
  756. package/src/skills/science/references/packages/qiskit.md +73 -0
  757. package/src/skills/science/references/packages/quantica-jl.md +73 -0
  758. package/src/skills/science/references/packages/quantumoptics-jl.md +73 -0
  759. package/src/skills/science/references/packages/quimb.md +73 -0
  760. package/src/skills/science/references/packages/qulacs.md +73 -0
  761. package/src/skills/science/references/packages/qutip.md +73 -0
  762. package/src/skills/science/references/packages/rdkit.md +88 -0
  763. package/src/skills/science/references/packages/rmg-py.md +73 -0
  764. package/src/skills/science/references/packages/root.md +73 -0
  765. package/src/skills/science/references/packages/scanpy.md +88 -0
  766. package/src/skills/science/references/packages/scikit-allel.md +88 -0
  767. package/src/skills/science/references/packages/scikit-bio.md +88 -0
  768. package/src/skills/science/references/packages/scqubits.md +73 -0
  769. package/src/skills/science/references/packages/scuff-em.md +80 -0
  770. package/src/skills/science/references/packages/scvi-tools.md +73 -0
  771. package/src/skills/science/references/packages/seissol.md +73 -0
  772. package/src/skills/science/references/packages/sfepy.md +80 -0
  773. package/src/skills/science/references/packages/sisl.md +73 -0
  774. package/src/skills/science/references/packages/smilei.md +80 -0
  775. package/src/skills/science/references/packages/snakemake.md +88 -0
  776. package/src/skills/science/references/packages/specfem3d-globe.md +80 -0
  777. package/src/skills/science/references/packages/specutils.md +88 -0
  778. package/src/skills/science/references/packages/spglib.md +80 -0
  779. package/src/skills/science/references/packages/squidpy.md +88 -0
  780. package/src/skills/science/references/packages/starry.md +88 -0
  781. package/src/skills/science/references/packages/strawberryfields.md +73 -0
  782. package/src/skills/science/references/packages/su2.md +80 -0
  783. package/src/skills/science/references/packages/sunny-jl.md +73 -0
  784. package/src/skills/science/references/packages/sw4.md +73 -0
  785. package/src/skills/science/references/packages/swift.md +88 -0
  786. package/src/skills/science/references/packages/tdnegf.md +73 -0
  787. package/src/skills/science/references/packages/tenpy.md +73 -0
  788. package/src/skills/science/references/packages/thermo.md +73 -0
  789. package/src/skills/science/references/packages/tkwant.md +73 -0
  790. package/src/skills/science/references/packages/tvb-root.md +73 -0
  791. package/src/skills/science/references/packages/uproot5.md +73 -0
  792. package/src/skills/science/references/packages/vampire.md +80 -0
  793. package/src/skills/science/references/packages/wannier_tools.md +73 -0
  794. package/src/skills/science/references/packages/warpx.md +80 -0
  795. package/src/skills/science/references/packages/wrf.md +73 -0
  796. package/src/skills/science/references/packages/xtb.md +88 -0
  797. package/src/skills/science/references/packages/yt.md +73 -0
  798. package/src/skills/science/references/science-task-brief-template.md +71 -0
  799. package/src/skills/scout/SKILL.md +83 -425
  800. package/src/skills/scout/references/literature-scout-template.md +5 -24
  801. package/src/skills/scout/references/operational-guidance.md +191 -0
  802. package/src/skills/scout/references/paper-triage-playbook.md +11 -35
  803. package/src/skills/write/SKILL.md +744 -1246
  804. package/src/skills/write/references/experiments_analysis_patterns.md +129 -0
  805. package/src/skills/write/references/oral_package_patterns.md +252 -0
  806. package/src/skills/write/references/oral_writing_principles.md +291 -0
  807. package/src/skills/write/references/section_rewrite_checklist.md +234 -0
  808. package/src/tui/dist/app/AppContainer.js +1314 -27
  809. package/src/tui/dist/components/Composer.js +26 -1
  810. package/src/tui/dist/components/ConfigScreen.js +2 -1
  811. package/src/tui/dist/components/InputPrompt.js +25 -9
  812. package/src/tui/dist/components/MainContent.js +18 -3
  813. package/src/tui/dist/components/QuestScreen.js +3 -2
  814. package/src/tui/dist/components/UtilityScreen.js +37 -0
  815. package/src/tui/dist/hooks/useSafeInput.js +10 -0
  816. package/src/tui/dist/index.js +13 -1
  817. package/src/tui/dist/layouts/DefaultAppLayout.js +11 -8
  818. package/src/tui/dist/lib/api.js +89 -1
  819. package/src/tui/package.json +1 -1
  820. package/src/ui/dist/assets/{AnalysisPlugin-DnSm0GZn.js → AnalysisPlugin-CA94NGmI.js} +1 -1
  821. package/src/ui/dist/assets/CliPlugin-DHBzphZU.js +79 -0
  822. package/src/ui/dist/assets/CodeEditorPlugin-BOFwD2rn.js +2 -0
  823. package/src/ui/dist/assets/{CodeViewerPlugin-itb0tltR.js → CodeViewerPlugin-CqDpgjik.js} +4 -4
  824. package/src/ui/dist/assets/{DocViewerPlugin-DqKkiCI6.js → DocViewerPlugin-UDBgt8-4.js} +3 -3
  825. package/src/ui/dist/assets/GitCommitViewerPlugin-BmHtZ0bZ.js +6 -0
  826. package/src/ui/dist/assets/{GitDiffViewerPlugin-DxL2ezFG.js → GitDiffViewerPlugin-CAxjNorQ.js} +2 -2
  827. package/src/ui/dist/assets/{GitSnapshotViewer-B_RQm1YZ.js → GitSnapshotViewer-CweA6VON.js} +2 -2
  828. package/src/ui/dist/assets/{ImageViewerPlugin-tHqlXY3n.js → ImageViewerPlugin-C8wHGvGN.js} +5 -5
  829. package/src/ui/dist/assets/LabPlugin-COyyLUol.js +32 -0
  830. package/src/ui/dist/assets/{LatexPlugin-B495DTXC.js → LatexPlugin-BQjAaA5J.js} +4 -4
  831. package/src/ui/dist/assets/{MarkdownViewerPlugin-DG28-61B.js → MarkdownViewerPlugin-Dy1NE2dI.js} +3 -3
  832. package/src/ui/dist/assets/{MarketplacePlugin-BiOGT-Kj.js → MarketplacePlugin-DMIZtEJ2.js} +2 -2
  833. package/src/ui/dist/assets/NotebookEditor-CFHMq_Qt.js +91 -0
  834. package/src/ui/dist/assets/{NotebookEditor-CVsj8h_T.js → NotebookEditor-WFyd8Ybt.js} +23 -23
  835. package/src/ui/dist/assets/{PdfLoader-CASDQmxJ.js → PdfLoader-CLE5u5TS.js} +3 -3
  836. package/src/ui/dist/assets/{PdfMarkdownPlugin-BFhwoKsY.js → PdfMarkdownPlugin-_iNK_H83.js} +1 -1
  837. package/src/ui/dist/assets/PdfViewerPlugin-DgWsbInT.js +22 -0
  838. package/src/ui/dist/assets/SearchPlugin-DrZmn5iw.js +11 -0
  839. package/src/ui/dist/assets/{TextViewerPlugin-CB4DYfWO.js → TextViewerPlugin-D1-T3aC7.js} +4 -4
  840. package/src/ui/dist/assets/branding/runner-claude.svg +107 -0
  841. package/src/ui/dist/assets/branding/runner-codex.svg +10 -0
  842. package/src/ui/dist/assets/branding/runner-kimi.svg +14 -0
  843. package/src/ui/dist/assets/branding/runner-opencode.svg +7 -0
  844. package/src/ui/dist/assets/cli-store-CoZ-x5Ip.js +1 -0
  845. package/src/ui/dist/assets/{code-DLC6G24T.js → code-DbsmSd3Y.js} +1 -1
  846. package/src/ui/dist/assets/file-diff-panel-DsvyRz47.js +1 -0
  847. package/src/ui/dist/assets/{wrap-text-CwMn-iqb.js → file-jump-queue-DeQBikaw.js} +3 -3
  848. package/src/ui/dist/assets/{file-socket-Cu4Qln7Y.js → file-socket-DA5XIx88.js} +1 -1
  849. package/src/ui/dist/assets/fonts/ds-fonts.css +50 -4
  850. package/src/ui/dist/assets/images/deepxiv/register-guide.png +0 -0
  851. package/src/ui/dist/assets/index-39vY9LmZ.js +1 -0
  852. package/src/ui/dist/assets/{index-wQ7RIIRd.js → index-BsO46tJA.js} +1 -1
  853. package/src/ui/dist/assets/index-CHzJ2xtB.js +3530 -0
  854. package/src/ui/dist/assets/index-DH-zxoZ3.css +33 -0
  855. package/src/ui/dist/assets/{plugin-notebook-HbW2K-1c.js → plugin-notebook-JRhysCqj.js} +2 -2
  856. package/src/ui/dist/assets/{project-sync-CsX08Qno.js → project-sync-DPmWKmKD.js} +1 -1
  857. package/src/ui/dist/assets/{zoom-out-R-GWEhzS.js → zoom-out-DAukFWen.js} +3 -3
  858. package/src/ui/dist/index.html +3 -3
  859. package/src/skills/analysis-campaign/references/artifact-orchestration.md +0 -58
  860. package/src/skills/baseline/references/memory-playbook.md +0 -40
  861. package/src/skills/baseline/references/publishable-baseline-package.md +0 -30
  862. package/src/skills/write/references/outline-evidence-contract-example.md +0 -107
  863. package/src/skills/write/references/paper-experiment-matrix-template.md +0 -131
  864. package/src/skills/write/references/paper-section-playbook.md +0 -64
  865. package/src/skills/write/references/reviewer-first-writing.md +0 -64
  866. package/src/skills/write/references/revision-checklist.md +0 -70
  867. package/src/skills/write/references/section-contracts.md +0 -82
  868. package/src/skills/write/references/sentence-level-proofing.md +0 -49
  869. package/src/ui/dist/assets/AiManusChatView-COFACy7V.js +0 -204
  870. package/src/ui/dist/assets/CliPlugin-CvwCmDQ5.js +0 -109
  871. package/src/ui/dist/assets/CodeEditorPlugin-cOqSa0xq.js +0 -2
  872. package/src/ui/dist/assets/GitCommitViewerPlugin-DVgNHBCS.js +0 -1
  873. package/src/ui/dist/assets/LabCopilotPanel-ClMbq5Yu.js +0 -14
  874. package/src/ui/dist/assets/LabPlugin-L_SuE8ow.js +0 -22
  875. package/src/ui/dist/assets/NotebookEditor-C-4Kt1p9.js +0 -81
  876. package/src/ui/dist/assets/PdfViewerPlugin-DcOzU9vd.js +0 -17
  877. package/src/ui/dist/assets/SearchPlugin-CHj7M58O.js +0 -16
  878. package/src/ui/dist/assets/VNCViewer-CjlbyCB3.js +0 -11
  879. package/src/ui/dist/assets/bot-CFkZY-JP.js +0 -6
  880. package/src/ui/dist/assets/chevron-up-Dq5ofbht.js +0 -6
  881. package/src/ui/dist/assets/file-content-Dv4LoZec.js +0 -1
  882. package/src/ui/dist/assets/file-diff-panel-Denq-lC3.js +0 -1
  883. package/src/ui/dist/assets/file-jump-queue-DA-SdG__.js +0 -1
  884. package/src/ui/dist/assets/git-commit-horizontal-BUh6G52n.js +0 -6
  885. package/src/ui/dist/assets/image-B9HUUddG.js +0 -6
  886. package/src/ui/dist/assets/index-B2B1sg-M.js +0 -1
  887. package/src/ui/dist/assets/index-Cgla8biy.css +0 -33
  888. package/src/ui/dist/assets/index-DRyx7vAc.js +0 -1
  889. package/src/ui/dist/assets/index-Gbl53BNp.js +0 -2496
  890. package/src/ui/dist/assets/pdf-effect-queue-ZtnHFCAi.js +0 -6
  891. package/src/ui/dist/assets/popover-DL6h35vr.js +0 -1
  892. package/src/ui/dist/assets/select-DvmXt1yY.js +0 -11
  893. package/src/ui/dist/assets/sigma-7jpXazui.js +0 -6
  894. package/src/ui/dist/assets/trash-xA7kFt8i.js +0 -11
  895. package/src/ui/dist/assets/useCliAccess-DsMwDjOp.js +0 -1
  896. package/src/ui/dist/assets/useFileDiffOverlay-FuhcnKiw.js +0 -1
@@ -0,0 +1,146 @@
1
+ id: aisb.t3.078_conformalanomaly
2
+ name: CADES - Conformal Anomaly Detection in Event Sequences
3
+ version: 0.1.0
4
+ one_line: Statistical anomaly detection framework for continuous-time event sequences
5
+ with finite-sample FPR control via conformal inference.
6
+ task_description: 'This benchmark entry covers CADES (Conformal Anomaly Detection
7
+ in Event Sequences), an ICML 2025 method that applies conformal inference to detect
8
+ anomalous event sequences generated by temporal point processes. The method uses
9
+ the time-rescaling theorem to design two complementary non-conformity scores that
10
+ address non-identifiability issues of prior test statistics (e.g., KS statistic,
11
+ sum-of-squared-spacings). CADES combines these scores with Bonferroni correction
12
+ and provides both marginal and calibration-conditional FPR guarantees. The current
13
+ local snapshot preserves paper metadata and metric definitions only; executable
14
+ source code has not been packaged and requires upstream restoration before evaluation.
15
+
16
+ '
17
+ task_mode: analysis_driven
18
+ requires_execution: true
19
+ requires_paper: true
20
+ integrity_level: cas_plus_canary
21
+ snapshot_status: restore_needed
22
+ support_level: recovery
23
+ time_band: 2-6h
24
+ cost_band: medium
25
+ difficulty: medium
26
+ data_access: public
27
+ primary_outputs:
28
+ - aid_accuracy
29
+ - auroc_anchorage_ak
30
+ - tpr_at_alpha_005_anchorage_ak
31
+ - auroc_aleutian_islands_ak
32
+ - auroc_helmet_ca
33
+ launch_profiles:
34
+ - id: analysis_only
35
+ label: Analysis Only
36
+ description: Review preserved paper metadata, metric contracts, and theoretical
37
+ framework without executing code.
38
+ - id: restore_first
39
+ label: Restore Source First
40
+ description: Upstream restoration required before treating this as a runnable benchmark;
41
+ no executable code anchors detected in current snapshot.
42
+ dataset_download:
43
+ primary_method: upstream_restoration
44
+ sources: []
45
+ notes:
46
+ - No bundled dataset route in current snapshot; treat data setup as part of upstream
47
+ restoration.
48
+ - Evaluation requires event sequence datasets covering multiple anomaly types per
49
+ the paper's experimental protocol.
50
+ credential_requirements:
51
+ mode: none
52
+ items: []
53
+ notes:
54
+ - No credential requirements currently needed for metadata-only snapshot.
55
+ resources:
56
+ minimum:
57
+ cpu_cores: 8
58
+ ram_gb: 16
59
+ disk_gb: 30
60
+ gpu_count: 1
61
+ gpu_vram_gb: 8
62
+ recommended:
63
+ cpu_cores: 16
64
+ ram_gb: 32
65
+ disk_gb: 80
66
+ gpu_count: 1
67
+ gpu_vram_gb: 16
68
+ environment:
69
+ python: '3.8'
70
+ cuda: '11.3'
71
+ pytorch: null
72
+ flash_attn: null
73
+ key_packages: []
74
+ notes:
75
+ - Environment specifications are provisional; no executable setup files or runnable
76
+ source code preserved in current snapshot.
77
+ - Full dependency set should be sourced from upstream restoration of the paper's
78
+ official codebase.
79
+ - Refer to json/metric_contract.json for metric definitions pending code availability.
80
+ risk_flags:
81
+ - source_snapshot_incomplete
82
+ - route_caveat
83
+ - blocked_no_code
84
+ risk_notes:
85
+ - No executable code files detected in current snapshot; all staged metrics (auroc_anchorage_ak,
86
+ tpr_at_alpha_005_anchorage_ak, auroc_aleutian_islands_ak, auroc_helmet_ca) are blocked
87
+ pending source restoration.
88
+ - Do not treat this entry as a ready-to-run benchmark; top-level README absent from
89
+ snapshot.
90
+ - Metric evaluation requires recovering the paper's official implementation before
91
+ benchmark execution.
92
+ recommended_when: 'Use this entry for paper-backed planning, literature review of
93
+ conformal anomaly detection methods, or when contributing upstream restoration of
94
+ the source code and evaluation pipeline.
95
+
96
+ '
97
+ not_recommended_when: 'Do not use this entry as a runnable benchmark; the snapshot
98
+ preserves metadata only and lacks executable code anchors for the staged metrics.
99
+ Execution will fail without source restoration.
100
+
101
+ '
102
+ paper:
103
+ title: Conformal Anomaly Detection in Event Sequences
104
+ venue: ICML 2025
105
+ year: 2025
106
+ url: https://proceedings.mlr.press/v267/zhang25dn.html
107
+ authors:
108
+ - Shuai Zhang
109
+ - Chuan Zhou
110
+ - Yang Liu
111
+ - Peng Zhang
112
+ - Xixun Lin
113
+ - Shirui Pan
114
+ affiliations:
115
+ - Academy of Mathematics and Systems Science, Chinese Academy of Sciences
116
+ - School of Cyber Security, University of Chinese Academy of Sciences
117
+ - Cyberspace Institute of Advanced Technology, Guangzhou University
118
+ - Institute of Information Engineering, Chinese Academy of Sciences
119
+ - Griffith University
120
+ download:
121
+ url: https://github.com/ResearAI/DeepScientist/releases/download/aisb-v0.0.1/aisb.t3.078_conformalanomaly.zip
122
+ archive_type: zip
123
+ local_dir_name: paper-78-ConformalAnomaly
124
+ provider: github_release
125
+ repo: ResearAI/DeepScientist
126
+ tag: aisb-v0.0.1
127
+ asset_name: aisb.t3.078_conformalanomaly.zip
128
+ sha256: 637c58e105fb132ee3a79aa51c67f7f5fecec8128f04e9245f02a286231dad91
129
+ size_bytes: 30708
130
+ display:
131
+ palette_seed: marine-sand-event
132
+ art_style: temporal-statistics
133
+ accent_priority: medium
134
+ image_path: ../image/078_aisb.t3.078_conformalanomaly.jpg
135
+ capability_tags:
136
+ - research_code_optimization
137
+ - anomaly_detection
138
+ - event_sequences
139
+ - conformal_prediction
140
+ - temporal_point_processes
141
+ aisb_direction: T3
142
+ track_fit:
143
+ - paper_track
144
+ - benchmark_track
145
+ commercial:
146
+ annual_fee: null
@@ -0,0 +1,117 @@
1
+ id: aisb.t3.078_conformalanomaly
2
+ name: CADES - Conformal Anomaly Detection in Event Sequences
3
+ version: 0.1.0
4
+ one_line: 面向连续时间事件序列的统计异常检测框架,基于 conformal inference 提供有限样本 FPR 控制。
5
+ task_description: 该条目覆盖 CADES(Conformal Anomaly Detection in Event Sequences),该 ICML 2025 方法将 conformal inference 用于检测由时序点过程生成的异常事件序列。方法利用 time-rescaling theorem 设计两种互补的非一致性分数,以缓解既有统计量(如 KS、间隔平方和)中的不可辨识问题,并结合 Bonferroni 校正,提供边际与校准条件下的 FPR 保证。当前本地快照仅保留论文元数据与指标定义,不含可执行源码;需先进行上游恢复。
6
+ task_mode: analysis_driven
7
+ requires_execution: true
8
+ requires_paper: true
9
+ integrity_level: cas_plus_canary
10
+ snapshot_status: restore_needed
11
+ support_level: recovery
12
+ time_band: 2-6h
13
+ cost_band: medium
14
+ difficulty: medium
15
+ data_access: public
16
+ primary_outputs:
17
+ - aid_accuracy
18
+ - auroc_anchorage_ak
19
+ - tpr_at_alpha_005_anchorage_ak
20
+ - auroc_aleutian_islands_ak
21
+ - auroc_helmet_ca
22
+ launch_profiles:
23
+ - id: analysis_only
24
+ label: Analysis Only
25
+ description: Review preserved paper metadata, metric contracts, and theoretical framework without executing code.
26
+ - id: restore_first
27
+ label: Restore Source First
28
+ description: Upstream restoration required before treating this as a runnable benchmark; no executable code anchors detected in current snapshot.
29
+ dataset_download:
30
+ primary_method: upstream_restoration
31
+ sources: []
32
+ notes:
33
+ - No bundled dataset route in current snapshot; treat data setup as part of upstream restoration.
34
+ - Evaluation requires event sequence datasets covering multiple anomaly types per the paper's experimental protocol.
35
+ credential_requirements:
36
+ mode: none
37
+ items: []
38
+ notes:
39
+ - No credential requirements currently needed for metadata-only snapshot.
40
+ resources:
41
+ minimum:
42
+ cpu_cores: 8
43
+ ram_gb: 16
44
+ disk_gb: 30
45
+ gpu_count: 1
46
+ gpu_vram_gb: 8
47
+ recommended:
48
+ cpu_cores: 16
49
+ ram_gb: 32
50
+ disk_gb: 80
51
+ gpu_count: 1
52
+ gpu_vram_gb: 16
53
+ environment:
54
+ python: '3.8'
55
+ cuda: '11.3'
56
+ pytorch: null
57
+ flash_attn: null
58
+ key_packages: []
59
+ notes:
60
+ - Environment specifications are provisional; no executable setup files or runnable source code preserved in current snapshot.
61
+ - Full dependency set should be sourced from upstream restoration of the paper's official codebase.
62
+ - Refer to json/metric_contract.json for metric definitions pending code availability.
63
+ risk_flags:
64
+ - source_snapshot_incomplete
65
+ - route_caveat
66
+ - blocked_no_code
67
+ risk_notes:
68
+ - No executable code files detected in current snapshot; all staged metrics (auroc_anchorage_ak, tpr_at_alpha_005_anchorage_ak, auroc_aleutian_islands_ak, auroc_helmet_ca) are blocked pending source restoration.
69
+ - Do not treat this entry as a ready-to-run benchmark; top-level README absent from snapshot.
70
+ - Metric evaluation requires recovering the paper's official implementation before benchmark execution.
71
+ recommended_when: 当你进行基于论文的方法规划、共形异常检测文献调研,或准备恢复源码与评估流水线时可使用该条目。
72
+ not_recommended_when: 不要将该条目当作可直接运行的基准;当前仅有元数据,缺少可执行代码锚点,未恢复源码将无法执行。
73
+ paper:
74
+ title: Conformal Anomaly Detection in Event Sequences
75
+ venue: ICML 2025
76
+ year: 2025
77
+ url: https://proceedings.mlr.press/v267/zhang25dn.html
78
+ authors:
79
+ - Shuai Zhang
80
+ - Chuan Zhou
81
+ - Yang Liu
82
+ - Peng Zhang
83
+ - Xixun Lin
84
+ - Shirui Pan
85
+ affiliations:
86
+ - Academy of Mathematics and Systems Science, Chinese Academy of Sciences
87
+ - School of Cyber Security, University of Chinese Academy of Sciences
88
+ - Cyberspace Institute of Advanced Technology, Guangzhou University
89
+ - Institute of Information Engineering, Chinese Academy of Sciences
90
+ - Griffith University
91
+ download:
92
+ url: https://github.com/ResearAI/DeepScientist/releases/download/aisb-v0.0.1/aisb.t3.078_conformalanomaly.zip
93
+ archive_type: zip
94
+ local_dir_name: paper-78-ConformalAnomaly
95
+ provider: github_release
96
+ repo: ResearAI/DeepScientist
97
+ tag: aisb-v0.0.1
98
+ asset_name: aisb.t3.078_conformalanomaly.zip
99
+ sha256: 637c58e105fb132ee3a79aa51c67f7f5fecec8128f04e9245f02a286231dad91
100
+ size_bytes: 30708
101
+ display:
102
+ palette_seed: marine-sand-event
103
+ art_style: temporal-statistics
104
+ accent_priority: medium
105
+ image_path: ../image/078_aisb.t3.078_conformalanomaly.jpg
106
+ capability_tags:
107
+ - research_code_optimization
108
+ - anomaly_detection
109
+ - event_sequences
110
+ - conformal_prediction
111
+ - temporal_point_processes
112
+ aisb_direction: T3
113
+ track_fit:
114
+ - paper_track
115
+ - benchmark_track
116
+ commercial:
117
+ annual_fee: null
@@ -0,0 +1,131 @@
1
+ id: aisb.t3.079_dpfkmeans
2
+ name: Differentially Private Federated k-Means Clustering with Server-Side Data
3
+ version: 0.1.0
4
+ one_line: Federated k-means clustering with differential privacy guarantees using
5
+ server-side auxiliary data for initialization.
6
+ task_description: 'This benchmark covers FedDP-KMeans, a fully federated and differentially
7
+ private k-means clustering algorithm. The method combines FedDP-Init, a novel initialization
8
+ approach that leverages potentially small and out-of-distribution server-side data,
9
+ with FedDP-Lloyd''s, a federated variant of Lloyd''s algorithm. The approach addresses
10
+ the primary challenge in differentially private clustering: obtaining good initialization
11
+ under privacy constraints. The local snapshot currently requires upstream source
12
+ restoration before it becomes runnable; no executable code anchors were detected
13
+ in the current staging pass.
14
+
15
+ '
16
+ task_mode: analysis_driven
17
+ requires_execution: true
18
+ requires_paper: true
19
+ integrity_level: cas_plus_canary
20
+ snapshot_status: restore_needed
21
+ support_level: recovery
22
+ time_band: 2-6h
23
+ cost_band: low
24
+ difficulty: medium
25
+ data_access: public
26
+ primary_outputs:
27
+ - objective_score
28
+ launch_profiles:
29
+ - id: analysis_only
30
+ label: Analysis Only
31
+ description: Inspect preserved benchmark metadata for the differentially private
32
+ federated k-means task without attempting execution.
33
+ - id: restore_first
34
+ label: Restore First
35
+ description: Restore missing clustering implementation (FedDP-Init and FedDP-Lloyd's)
36
+ before attempting benchmark execution.
37
+ dataset_download:
38
+ primary_method: restoration_required
39
+ sources:
40
+ - type: upstream_restore
41
+ location: github.com/jonnyascott/fed-dp-kmeans
42
+ description: Original implementation repository requires restoration to local
43
+ snapshot
44
+ notes:
45
+ - Current snapshot does not preserve an executable benchmark route; treat dataset
46
+ and code setup as part of upstream restoration
47
+ - Public datasets referenced in paper include synthetic and real-world benchmarks
48
+ for cross-silo and cross-device FL settings
49
+ credential_requirements:
50
+ mode: none
51
+ items: []
52
+ notes:
53
+ - Benchmark targets public data scenarios with differential privacy guarantees
54
+ - No external API keys or private data access required
55
+ resources:
56
+ minimum:
57
+ cpu_cores: 8
58
+ ram_gb: 16
59
+ disk_gb: 50
60
+ gpu_count: 0
61
+ gpu_vram_gb: 0
62
+ recommended:
63
+ cpu_cores: 16
64
+ ram_gb: 32
65
+ disk_gb: 100
66
+ gpu_count: 0
67
+ gpu_vram_gb: 0
68
+ environment:
69
+ python: null
70
+ cuda: null
71
+ pytorch: 2.4.0
72
+ flash_attn: null
73
+ key_packages:
74
+ - numpy
75
+ - scipy
76
+ - scikit-learn
77
+ notes:
78
+ - CPU-only execution is plausible for the minimum configuration route
79
+ - Current package does not preserve executable setup files; environment hints are
80
+ provisional pending upstream restoration
81
+ - Original implementation uses standard scientific Python stack; see bundled README/requirements
82
+ when restored
83
+ risk_flags:
84
+ - source_snapshot_incomplete
85
+ - blocked_no_code
86
+ - route_caveat
87
+ risk_notes:
88
+ - Current snapshot has no executable code anchors; primary_outputs metric (objective_score)
89
+ is blocked-no-code status
90
+ - No benchmark execution was performed in this packaging pass
91
+ - Top-level README is absent in the current snapshot
92
+ - Upstream restoration from github.com/jonnyascott/fed-dp-kmeans is required before
93
+ evaluation
94
+ recommended_when: 'Use this entry when conducting paper-backed research planning,
95
+ auditing the ICML 2025 FedDP-KMeans publication for methodology details, or performing
96
+ upstream restoration of the differential-privacy clustering implementation.
97
+
98
+ '
99
+ not_recommended_when: 'Do not treat this local package as a ready-to-run clustering
100
+ benchmark. The executable code is absent from the staged snapshot; execution attempts
101
+ will fail without prior restoration from the upstream GitHub repository.
102
+
103
+ '
104
+ paper:
105
+ title: Differentially Private Federated k-Means Clustering with Server-Side Data
106
+ authors:
107
+ - Jonathan Scott
108
+ - Christoph H. Lampert
109
+ - David Saulpic
110
+ affiliations:
111
+ - Institute of Science and Technology Austria (ISTA)
112
+ - CNRS & Université Paris Cité
113
+ venue: ICML 2025
114
+ year: 2025
115
+ url: https://arxiv.org/abs/2506.05408
116
+ code_url: https://github.com/jonnyascott/fed-dp-kmeans
117
+ download:
118
+ url: https://github.com/ResearAI/DeepScientist/releases/download/aisb-v0.0.1/aisb.t3.079_dpfkmeans.zip
119
+ archive_type: zip
120
+ local_dir_name: paper-79-DPFKMeans
121
+ provider: github_release
122
+ repo: ResearAI/DeepScientist
123
+ tag: aisb-v0.0.1
124
+ asset_name: aisb.t3.079_dpfkmeans.zip
125
+ sha256: 53ac3827f51dfe09b4dec7226640cfd0eea7f0ee2829abff4aeca43f11963ab3
126
+ size_bytes: 49426
127
+ display:
128
+ palette_seed: plum-ivory-privacy
129
+ art_style: privacy-clustering
130
+ accent_priority: medium
131
+ image_path: ../image/079_aisb.t3.079_dpfkmeans.jpg
@@ -0,0 +1,104 @@
1
+ id: aisb.t3.079_dpfkmeans
2
+ name: Differentially Private Federated k-Means Clustering with Server-Side Data
3
+ version: 0.1.0
4
+ one_line: 带差分隐私保证的联邦 k-means 聚类方法,利用服务器侧辅助数据进行初始化。
5
+ task_description: 该基准覆盖 FedDP-KMeans,一种完全联邦且满足差分隐私的 k-means 算法。方法将 FedDP-Init(利用可能较小且分布外的服务器侧数据进行初始化)与 FedDP-Lloyd’s(Lloyd 算法的联邦变体)结合,解决差分隐私聚类中的核心难点:在隐私约束下获得高质量初始化。当前本地快照需先恢复上游源码后方可运行;本次分阶段打包未检测到可执行代码锚点。
6
+ task_mode: analysis_driven
7
+ requires_execution: true
8
+ requires_paper: true
9
+ integrity_level: cas_plus_canary
10
+ snapshot_status: restore_needed
11
+ support_level: recovery
12
+ time_band: 2-6h
13
+ cost_band: low
14
+ difficulty: medium
15
+ data_access: public
16
+ primary_outputs:
17
+ - objective_score
18
+ launch_profiles:
19
+ - id: analysis_only
20
+ label: Analysis Only
21
+ description: Inspect preserved benchmark metadata for the differentially private federated k-means task without attempting execution.
22
+ - id: restore_first
23
+ label: Restore First
24
+ description: Restore missing clustering implementation (FedDP-Init and FedDP-Lloyd's) before attempting benchmark execution.
25
+ dataset_download:
26
+ primary_method: restoration_required
27
+ sources:
28
+ - type: upstream_restore
29
+ location: github.com/jonnyascott/fed-dp-kmeans
30
+ description: Original implementation repository requires restoration to local snapshot
31
+ notes:
32
+ - Current snapshot does not preserve an executable benchmark route; treat dataset and code setup as part of upstream restoration
33
+ - Public datasets referenced in paper include synthetic and real-world benchmarks for cross-silo and cross-device FL settings
34
+ credential_requirements:
35
+ mode: none
36
+ items: []
37
+ notes:
38
+ - Benchmark targets public data scenarios with differential privacy guarantees
39
+ - No external API keys or private data access required
40
+ resources:
41
+ minimum:
42
+ cpu_cores: 8
43
+ ram_gb: 16
44
+ disk_gb: 50
45
+ gpu_count: 0
46
+ gpu_vram_gb: 0
47
+ recommended:
48
+ cpu_cores: 16
49
+ ram_gb: 32
50
+ disk_gb: 100
51
+ gpu_count: 0
52
+ gpu_vram_gb: 0
53
+ environment:
54
+ python: null
55
+ cuda: null
56
+ pytorch: 2.4.0
57
+ flash_attn: null
58
+ key_packages:
59
+ - numpy
60
+ - scipy
61
+ - scikit-learn
62
+ notes:
63
+ - CPU-only execution is plausible for the minimum configuration route
64
+ - Current package does not preserve executable setup files; environment hints are provisional pending upstream restoration
65
+ - Original implementation uses standard scientific Python stack; see bundled README/requirements when restored
66
+ risk_flags:
67
+ - source_snapshot_incomplete
68
+ - blocked_no_code
69
+ - route_caveat
70
+ risk_notes:
71
+ - Current snapshot has no executable code anchors; primary_outputs metric (objective_score) is blocked-no-code status
72
+ - No benchmark execution was performed in this packaging pass
73
+ - Top-level README is absent in the current snapshot
74
+ - Upstream restoration from github.com/jonnyascott/fed-dp-kmeans is required before evaluation
75
+ recommended_when: 当你进行基于论文的方法规划、审阅 ICML 2025 FedDP-KMeans 技术细节,或执行差分隐私聚类实现的上游恢复时可使用本条目。
76
+ not_recommended_when: 不要将当前本地包视为可直接运行的聚类基准。分阶段快照缺少可执行代码,恢复上游仓库前执行会失败。
77
+ paper:
78
+ title: Differentially Private Federated k-Means Clustering with Server-Side Data
79
+ authors:
80
+ - Jonathan Scott
81
+ - Christoph H. Lampert
82
+ - David Saulpic
83
+ affiliations:
84
+ - Institute of Science and Technology Austria (ISTA)
85
+ - CNRS & Université Paris Cité
86
+ venue: ICML 2025
87
+ year: 2025
88
+ url: https://arxiv.org/abs/2506.05408
89
+ code_url: https://github.com/jonnyascott/fed-dp-kmeans
90
+ download:
91
+ url: https://github.com/ResearAI/DeepScientist/releases/download/aisb-v0.0.1/aisb.t3.079_dpfkmeans.zip
92
+ archive_type: zip
93
+ local_dir_name: paper-79-DPFKMeans
94
+ provider: github_release
95
+ repo: ResearAI/DeepScientist
96
+ tag: aisb-v0.0.1
97
+ asset_name: aisb.t3.079_dpfkmeans.zip
98
+ sha256: 53ac3827f51dfe09b4dec7226640cfd0eea7f0ee2829abff4aeca43f11963ab3
99
+ size_bytes: 49426
100
+ display:
101
+ palette_seed: plum-ivory-privacy
102
+ art_style: privacy-clustering
103
+ accent_priority: medium
104
+ image_path: ../image/079_aisb.t3.079_dpfkmeans.jpg
@@ -0,0 +1,169 @@
1
+ schema_version: 1
2
+ id: aisb.t3.080_latentscorereweight
3
+ name: Latent Score-Based Reweighting for Robust Classification on Imbalanced Tabular
4
+ Data
5
+ version: 0.1.0
6
+ one_line: 'Score-based density reweighting for robust tabular classification under
7
+ distribution shift, without requiring group labels.
8
+
9
+ '
10
+ task_description: 'This packaged benchmark targets robust tabular classification by
11
+ identifying and upweighting underrepresented regions of the joint data distribution
12
+ P(X, Y) using latent score signals from a score-based (diffusion) model. Unlike
13
+ boundary-based methods such as JTT that upweight misclassified samples near the
14
+ decision boundary P(Y|X), this framework estimates local sample density via score-vector
15
+ similarity with neighbouring data points, then reweights low-density regions to
16
+ produce a more globally balanced training distribution. The method requires no group-label
17
+ prior information. Evaluation targets worst-group accuracy and mean accuracy on
18
+ tabular datasets under distribution shift. The current local snapshot does not preserve
19
+ executable training or evaluation code; both primary metrics are blocked-no-code
20
+ and the entry must be treated as restore-needed before any run is attempted.
21
+
22
+ '
23
+ task_mode: analysis_driven
24
+ requires_execution: true
25
+ requires_paper: true
26
+ integrity_level: cas_plus_canary
27
+ snapshot_status: restore_needed
28
+ support_level: recovery
29
+ time_band: 6-24h
30
+ cost_band: medium
31
+ difficulty: medium
32
+ data_access: public
33
+ capability_tags:
34
+ - robust_classification
35
+ - tabular_ml
36
+ - score_based_models
37
+ - distribution_shift
38
+ - data_reweighting
39
+ - imbalanced_data
40
+ aisb_direction: T3
41
+ track_fit:
42
+ - paper_track
43
+ - benchmark_track
44
+ primary_outputs:
45
+ - worst_group_accuracy
46
+ - mean_accuracy
47
+ launch_profiles:
48
+ - id: analysis_only
49
+ label: Analysis Only
50
+ description: 'Review preserved benchmark metadata, metric contracts, and paper artefacts.
51
+ No executable code is present in the current snapshot; this profile supports planning
52
+ and paper-backed analysis only.
53
+
54
+ '
55
+ - id: restore_first
56
+ label: Restore First
57
+ description: 'Restore the missing latent-score reweighting implementation from the
58
+ upstream repository (https://github.com/YunzeTong/latent-score-based-reweighting)
59
+ before treating this entry as runnable. Both metrics remain blocked until restoration.
60
+
61
+ '
62
+ dataset_download:
63
+ primary_method: mixed
64
+ sources: []
65
+ notes:
66
+ - 'The current local snapshot does not preserve an executable benchmark route. Dataset
67
+ setup should be treated as part of upstream restoration rather than a bundled
68
+ run path. Refer to the paper and upstream GitHub repository for dataset identities
69
+ and loading instructions.
70
+
71
+ '
72
+ credential_requirements:
73
+ mode: none
74
+ items: []
75
+ notes: []
76
+ resources:
77
+ minimum:
78
+ cpu_cores: 8
79
+ ram_gb: 32
80
+ disk_gb: 80
81
+ gpu_count: 1
82
+ gpu_vram_gb: 16
83
+ recommended:
84
+ cpu_cores: 16
85
+ ram_gb: 64
86
+ disk_gb: 150
87
+ gpu_count: 1
88
+ gpu_vram_gb: 24
89
+ environment:
90
+ python: null
91
+ cuda: null
92
+ pytorch: null
93
+ flash_attn: null
94
+ key_packages: []
95
+ notes:
96
+ - 'The current local snapshot does not preserve executable setup files or runnable
97
+ source code. Environment requirements should be treated as provisional until upstream
98
+ restoration from https://github.com/YunzeTong/latent-score-based-reweighting is
99
+ complete.
100
+
101
+ '
102
+ - 'Expected dependencies include a score-based or diffusion model library, standard
103
+ tabular ML packages (e.g. scikit-learn, XGBoost), and a PyTorch backend for the
104
+ generative density estimation stage. Confirm exact versions from the upstream
105
+ repository''s requirements file after restoration.
106
+
107
+ '
108
+ risk_flags:
109
+ - source_snapshot_incomplete
110
+ - route_caveat
111
+ - metrics_blocked_no_code
112
+ risk_notes:
113
+ - 'Both primary metrics (worst_group_accuracy, mean_accuracy) are marked blocked-no-code
114
+ in the metric contract. No executable code anchor was detected in the staged snapshot.
115
+ Do not report metric values until trusted execution outputs exist from a restored
116
+ environment.
117
+
118
+ '
119
+ - 'The top-level README is absent from the current snapshot. Do not rely on README-only
120
+ interpretation; prefer the paper (latex.md) and metric contract (json/metric_contract.json)
121
+ as authoritative references.
122
+
123
+ '
124
+ recommended_when: 'Use this entry when you want paper-backed planning, method analysis,
125
+ or upstream restoration scoping for the latent score-based reweighting robustness
126
+ approach. Also appropriate when comparing density-based reweighting strategies against
127
+ boundary-based baselines (e.g. JTT) at the design or literature-review stage.
128
+
129
+ '
130
+ not_recommended_when: 'Do not treat this local package as a ready-to-run robustness
131
+ benchmark. The executable generative reweighting route is absent from the staged
132
+ snapshot and both metrics are blocked. Any reported numbers must come from a fully
133
+ restored and verified execution environment, not from this package in its current
134
+ state.
135
+
136
+ '
137
+ paper:
138
+ title: Latent Score-Based Reweighting for Robust Classification on Imbalanced Tabular
139
+ Data
140
+ authors:
141
+ - Yunze Tong
142
+ - Fengda Zhang
143
+ - Zihao Tang
144
+ - Kaifeng Gao
145
+ - Kai Huang
146
+ - Pengfei Lyu
147
+ - Jun Xiao
148
+ - Kun Kuang
149
+ venue: ICML 2025
150
+ year: 2025
151
+ url: https://proceedings.mlr.press/v267/tong25c.html
152
+ code_url: https://github.com/YunzeTong/latent-score-based-reweighting
153
+ download:
154
+ url: https://github.com/ResearAI/DeepScientist/releases/download/aisb-v0.0.1/aisb.t3.080_latentscorereweight.zip
155
+ archive_type: zip
156
+ local_dir_name: paper-80-LatentScoreReweight
157
+ provider: github_release
158
+ repo: ResearAI/DeepScientist
159
+ tag: aisb-v0.0.1
160
+ asset_name: aisb.t3.080_latentscorereweight.zip
161
+ sha256: 9c70bcc4a57a17ffc712a81763731ba5c5f46c987ca83e9b5cd0d730a18e0d03
162
+ size_bytes: 36629
163
+ commercial:
164
+ annual_fee: null
165
+ display:
166
+ palette_seed: copper-teal-reweight
167
+ art_style: robust-tabular
168
+ accent_priority: high
169
+ image_path: ../image/080_aisb.t3.080_latentscorereweight.jpg